HEADER    TRANSFERASE                             22-MAR-13   4JT2              
TITLE     STRUCTURE OF CLOSTRIDIUM THERMOCELLUM POLYNUCLEOTIDE KINASE BOUND TO  
TITLE    2 CTP                                                                  
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: METALLOPHOSPHOESTERASE;                                    
COMPND   3 CHAIN: A, B;                                                         
COMPND   4 EC: 2.7.1.78;                                                        
COMPND   5 ENGINEERED: YES;                                                     
COMPND   6 MUTATION: YES                                                        
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM THERMOCELLUM;                       
SOURCE   3 ORGANISM_TAXID: 203119;                                              
SOURCE   4 STRAIN: ATCC 27405 / DSM 1237;                                       
SOURCE   5 GENE: CTHE_2768;                                                     
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562                                         
KEYWDS    RNA REPAIR, P-LOOP PHOSPHOTRANSFERASE, POLYNUCLEOTIDE KINASE,         
KEYWDS   2 TRANSFERASE                                                          
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    U.DAS,L.K.WANG,P.SMITH,S.SHUMAN                                       
REVDAT   3   06-NOV-24 4JT2    1       REMARK SEQADV LINK                       
REVDAT   2   18-DEC-13 4JT2    1       JRNL                                     
REVDAT   1   28-AUG-13 4JT2    0                                                
JRNL        AUTH   U.DAS,L.K.WANG,P.SMITH,S.SHUMAN                              
JRNL        TITL   STRUCTURAL AND BIOCHEMICAL ANALYSIS OF THE PHOSPHATE DONOR   
JRNL        TITL 2 SPECIFICITY OF THE POLYNUCLEOTIDE KINASE COMPONENT OF THE    
JRNL        TITL 3 BACTERIAL PNKPHEN1 RNA REPAIR SYSTEM.                        
JRNL        REF    BIOCHEMISTRY                  V.  52  4734 2013              
JRNL        REFN                   ISSN 0006-2960                               
JRNL        PMID   23721485                                                     
JRNL        DOI    10.1021/BI400412X                                            
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.49 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX (PHENIX.REFINE: 1.8.1_1168)                   
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : ML                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.49                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 44.54                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 1.340                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 98.8                           
REMARK   3   NUMBER OF REFLECTIONS             : 13101                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.185                           
REMARK   3   R VALUE            (WORKING SET) : 0.181                           
REMARK   3   FREE R VALUE                     : 0.227                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 7.920                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1037                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 44.5453 -  4.7640    1.00     1861   159  0.1742 0.2087        
REMARK   3     2  4.7640 -  3.7819    1.00     1751   150  0.1525 0.1803        
REMARK   3     3  3.7819 -  3.3040    1.00     1745   151  0.1867 0.2444        
REMARK   3     4  3.3040 -  3.0020    1.00     1711   147  0.1949 0.2494        
REMARK   3     5  3.0020 -  2.7869    1.00     1714   146  0.1966 0.2729        
REMARK   3     6  2.7869 -  2.6226    1.00     1712   148  0.2078 0.2286        
REMARK   3     7  2.6226 -  2.4900    0.92     1570   136  0.2024 0.2870        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : FLAT BULK SOLVENT MODEL                       
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.250            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.740           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.006           2859                                  
REMARK   3   ANGLE     :  1.093           3869                                  
REMARK   3   CHIRALITY :  0.064            438                                  
REMARK   3   PLANARITY :  0.005            489                                  
REMARK   3   DIHEDRAL  : 16.159           1113                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : 7                                          
REMARK   3   TLS GROUP : 1                                                      
REMARK   3    SELECTION: CHAIN A AND (RESID 0:20 )                              
REMARK   3    ORIGIN FOR THE GROUP (A):  30.7947  25.9952  75.8771              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.2463 T22:   0.2247                                     
REMARK   3      T33:   0.2188 T12:   0.0356                                     
REMARK   3      T13:  -0.0048 T23:   0.0253                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   1.0291 L22:   0.4888                                     
REMARK   3      L33:   1.5089 L12:   0.2912                                     
REMARK   3      L13:  -0.9852 L23:  -0.2772                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:  -0.1582 S12:   0.0631 S13:   0.2792                       
REMARK   3      S21:  -0.1092 S22:   0.1618 S23:   0.0920                       
REMARK   3      S31:   0.4995 S32:   0.0169 S33:  -0.0157                       
REMARK   3   TLS GROUP : 2                                                      
REMARK   3    SELECTION: CHAIN A AND (RESID 21:50 )                             
REMARK   3    ORIGIN FOR THE GROUP (A):  30.7807  21.8585  91.0050              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.2469 T22:   0.2167                                     
REMARK   3      T33:   0.2676 T12:   0.1178                                     
REMARK   3      T13:   0.0026 T23:   0.0319                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   0.3620 L22:   1.2509                                     
REMARK   3      L33:   0.5101 L12:   0.3698                                     
REMARK   3      L13:   0.1349 L23:   0.3022                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.0692 S12:   0.0611 S13:   0.0774                       
REMARK   3      S21:   0.1798 S22:  -0.0874 S23:  -0.0102                       
REMARK   3      S31:   0.2089 S32:   0.2604 S33:  -0.0080                       
REMARK   3   TLS GROUP : 3                                                      
REMARK   3    SELECTION: CHAIN A AND (RESID 51:106 )                            
REMARK   3    ORIGIN FOR THE GROUP (A):  28.9785  33.8448  86.3555              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.2557 T22:   0.2026                                     
REMARK   3      T33:   0.1983 T12:   0.0065                                     
REMARK   3      T13:   0.0097 T23:   0.0153                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   0.3285 L22:   0.1463                                     
REMARK   3      L33:   0.2406 L12:  -0.1550                                     
REMARK   3      L13:   0.0437 L23:  -0.1669                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:  -0.0960 S12:  -0.1668 S13:  -0.0742                       
REMARK   3      S21:   0.0205 S22:  -0.0188 S23:   0.0440                       
REMARK   3      S31:  -0.1234 S32:   0.1707 S33:  -0.0002                       
REMARK   3   TLS GROUP : 4                                                      
REMARK   3    SELECTION: CHAIN A AND (RESID 107:157 )                           
REMARK   3    ORIGIN FOR THE GROUP (A):  18.1228  21.7277  79.7926              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.2100 T22:   0.1700                                     
REMARK   3      T33:   0.2611 T12:  -0.0376                                     
REMARK   3      T13:  -0.0020 T23:   0.0197                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   0.0540 L22:   0.3267                                     
REMARK   3      L33:   0.5724 L12:   0.0828                                     
REMARK   3      L13:  -0.2290 L23:   0.1812                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.0184 S12:   0.0871 S13:  -0.0021                       
REMARK   3      S21:  -0.0454 S22:  -0.0895 S23:   0.1109                       
REMARK   3      S31:   0.1713 S32:   0.0414 S33:  -0.0313                       
REMARK   3   TLS GROUP : 5                                                      
REMARK   3    SELECTION: CHAIN A AND (RESID 158:170 )                           
REMARK   3    ORIGIN FOR THE GROUP (A):  33.4941  20.8772  70.8307              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.4051 T22:   0.4011                                     
REMARK   3      T33:   0.2283 T12:   0.1549                                     
REMARK   3      T13:   0.0022 T23:   0.0612                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   0.2072 L22:   0.0666                                     
REMARK   3      L33:   0.3357 L12:   0.1043                                     
REMARK   3      L13:  -0.2619 L23:  -0.1459                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:  -0.0230 S12:   0.0693 S13:   0.0042                       
REMARK   3      S21:  -0.3339 S22:  -0.1257 S23:  -0.1026                       
REMARK   3      S31:   0.3638 S32:   0.3951 S33:  -0.1798                       
REMARK   3   TLS GROUP : 6                                                      
REMARK   3    SELECTION: CHAIN B AND (RESID 0:106 )                             
REMARK   3    ORIGIN FOR THE GROUP (A):  28.0180  35.3266  49.1130              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.1886 T22:   0.2143                                     
REMARK   3      T33:   0.1812 T12:   0.0301                                     
REMARK   3      T13:  -0.0313 T23:  -0.0175                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   1.1642 L22:   0.6746                                     
REMARK   3      L33:   1.0038 L12:   0.3439                                     
REMARK   3      L13:  -1.0408 L23:  -0.1644                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.0730 S12:   0.1255 S13:  -0.1133                       
REMARK   3      S21:  -0.0143 S22:  -0.0334 S23:  -0.0550                       
REMARK   3      S31:   0.1400 S32:   0.0319 S33:   0.0012                       
REMARK   3   TLS GROUP : 7                                                      
REMARK   3    SELECTION: CHAIN B AND (RESID 107:169 )                           
REMARK   3    ORIGIN FOR THE GROUP (A):  16.3492  36.9154  56.6636              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.1516 T22:   0.2691                                     
REMARK   3      T33:   0.2154 T12:  -0.0171                                     
REMARK   3      T13:  -0.0306 T23:   0.0019                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   0.0902 L22:   0.9976                                     
REMARK   3      L33:   1.1330 L12:  -0.2747                                     
REMARK   3      L13:  -0.1240 L23:  -0.0894                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.0969 S12:   0.0220 S13:  -0.1072                       
REMARK   3      S21:  -0.0828 S22:  -0.0606 S23:   0.1319                       
REMARK   3      S31:   0.0315 S32:  -0.1753 S33:  -0.0001                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : 1                                           
REMARK   3   NCS GROUP : 1                                                      
REMARK   3    NCS OPERATOR : 1                                                  
REMARK   3     REFERENCE SELECTION: CHAIN A AND (RESSEQ 0:47 OR RESSEQ 53:167   
REMARK   3                          )                                           
REMARK   3     SELECTION          : CHAIN B AND (RESSEQ 0:47 OR RESSEQ 53:167   
REMARK   3                          )                                           
REMARK   3     ATOM PAIRS NUMBER  : 1282                                        
REMARK   3     RMSD               : 0.060                                       
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 4JT2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-APR-13.                  
REMARK 100 THE DEPOSITION ID IS D_1000078468.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 26-SEP-12                          
REMARK 200  TEMPERATURE           (KELVIN) : 130                                
REMARK 200  PH                             : 5.6                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : NSLS                               
REMARK 200  BEAMLINE                       : X25                                
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.1                                
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : PIXEL                              
REMARK 200  DETECTOR MANUFACTURER          : DECTRIS PILATUS 6M                 
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : MOSFLM                             
REMARK 200  DATA SCALING SOFTWARE          : SCALA                              
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 13156                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.480                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 58.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : -999.00                            
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 100.0                              
REMARK 200  DATA REDUNDANCY                : NULL                               
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : NULL                               
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.48                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.58                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 100.0                              
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: DIRECT REFINEMENT            
REMARK 200 SOFTWARE USED: PHENIX                                                
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 46.51                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM SODIUM CITRATE, 100MM MGCL2, 16    
REMARK 280  -18% PEG 3350, 2MM CTP, PH 5.6, VAPOR DIFFUSION, HANGING DROP,      
REMARK 280  TEMPERATURE 298K                                                    
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21                       
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X+1/2,-Y,Z+1/2                                         
REMARK 290       3555   -X,Y+1/2,-Z+1/2                                         
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000       22.65300            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       59.77300            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       33.39050            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       59.77300            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       22.65300            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       33.39050            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     PRO B   170                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O    ASP A    47     O    HOH A   362              2.16            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC             
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT.  AN ATOM LOCATED WITHIN 0.15          
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A           
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375             
REMARK 500 INSTEAD OF REMARK 500.  ATOMS WITH NON-BLANK ALTERNATE               
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.            
REMARK 500                                                                      
REMARK 500 DISTANCE CUTOFF:                                                     
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS              
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS                  
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI  SSYMOP   DISTANCE          
REMARK 500   O    GLN B    70     NH2  ARG B   131     1655     2.18            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    ARG A  68   CD  -  NE  -  CZ  ANGL. DEV. =   9.9 DEGREES          
REMARK 500    ARG A  68   NE  -  CZ  -  NH1 ANGL. DEV. =  -7.8 DEGREES          
REMARK 500    ARG A  68   NE  -  CZ  -  NH2 ANGL. DEV. =   7.1 DEGREES          
REMARK 500    ARG B  68   NE  -  CZ  -  NH1 ANGL. DEV. =   5.2 DEGREES          
REMARK 500    ARG B  68   NE  -  CZ  -  NH2 ANGL. DEV. =  -6.3 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MG A 201  MG                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 SER A  22   OG                                                     
REMARK 620 2 CTP A 202   O3G 167.1                                              
REMARK 620 3 CTP A 202   O2B  91.3  88.4                                        
REMARK 620 4 HOH A 301   O    84.6  82.7  98.6                                  
REMARK 620 5 HOH A 330   O    84.3  94.6 172.5  75.1                            
REMARK 620 6 HOH A 366   O    95.9  97.0  93.4 167.9  93.0                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MG B1002  MG                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 SER B  22   OG                                                     
REMARK 620 2 CTP B1001   O2B  94.0                                              
REMARK 620 3 CTP B1001   O3G 163.6  87.8                                        
REMARK 620 4 HOH B1122   O    81.8 168.0  93.2                                  
REMARK 620 5 HOH B1144   O   101.5  93.4  94.6  98.4                            
REMARK 620 6 HOH B1146   O    81.6  95.1  82.1  73.3 170.7                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 201                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CTP A 202                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CTP B 1001                
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 1002                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 4JST   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4JSY   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4JT4   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4GP7   RELATED DB: PDB                                   
REMARK 900 SAME PROTEIN COMPLEXED WITH ATP                                      
REMARK 900 RELATED ID: 4GP6   RELATED DB: PDB                                   
REMARK 900 SAME PROTEIN COMPLEXED WITH ADP                                      
DBREF  4JT2 A    1   170  UNP    A3DJ38   A3DJ38_CLOTH     1    170             
DBREF  4JT2 B    1   170  UNP    A3DJ38   A3DJ38_CLOTH     1    170             
SEQADV 4JT2 SER A    0  UNP  A3DJ38              EXPRESSION TAG                 
SEQADV 4JT2 MSE A   44  UNP  A3DJ38    VAL    44 ENGINEERED MUTATION            
SEQADV 4JT2 MSE A  137  UNP  A3DJ38    LEU   137 ENGINEERED MUTATION            
SEQADV 4JT2 SER B    0  UNP  A3DJ38              EXPRESSION TAG                 
SEQADV 4JT2 MSE B   44  UNP  A3DJ38    VAL    44 ENGINEERED MUTATION            
SEQADV 4JT2 MSE B  137  UNP  A3DJ38    LEU   137 ENGINEERED MUTATION            
SEQRES   1 A  171  SER MSE LYS LEU THR ILE PRO GLU LEU SER LEU VAL VAL          
SEQRES   2 A  171  LEU ILE GLY SER SER GLY SER GLY LYS SER THR PHE ALA          
SEQRES   3 A  171  LYS LYS HIS PHE LYS PRO THR GLU VAL ILE SER SER ASP          
SEQRES   4 A  171  PHE CYS ARG GLY LEU MSE SER ASP ASP GLU ASN ASP GLN          
SEQRES   5 A  171  THR VAL THR GLY ALA ALA PHE ASP VAL LEU HIS TYR ILE          
SEQRES   6 A  171  VAL SER LYS ARG LEU GLN LEU GLY LYS LEU THR VAL VAL          
SEQRES   7 A  171  ASP ALA THR ASN VAL GLN GLU SER ALA ARG LYS PRO LEU          
SEQRES   8 A  171  ILE GLU ILE ALA LYS ASP TYR HIS CYS PHE PRO VAL ALA          
SEQRES   9 A  171  VAL VAL PHE ASN LEU PRO GLU LYS VAL CYS GLN GLU ARG          
SEQRES  10 A  171  ASN LYS ASN ARG THR ASP ARG GLN VAL GLU GLU TYR VAL          
SEQRES  11 A  171  ILE ARG LYS HIS THR GLN GLN MSE LYS LYS SER ILE LYS          
SEQRES  12 A  171  GLY LEU GLN ARG GLU GLY PHE ARG TYR VAL TYR ILE LEU          
SEQRES  13 A  171  ASN SER PRO GLU GLU VAL GLU GLU VAL VAL PHE GLU ARG          
SEQRES  14 A  171  GLN PRO                                                      
SEQRES   1 B  171  SER MSE LYS LEU THR ILE PRO GLU LEU SER LEU VAL VAL          
SEQRES   2 B  171  LEU ILE GLY SER SER GLY SER GLY LYS SER THR PHE ALA          
SEQRES   3 B  171  LYS LYS HIS PHE LYS PRO THR GLU VAL ILE SER SER ASP          
SEQRES   4 B  171  PHE CYS ARG GLY LEU MSE SER ASP ASP GLU ASN ASP GLN          
SEQRES   5 B  171  THR VAL THR GLY ALA ALA PHE ASP VAL LEU HIS TYR ILE          
SEQRES   6 B  171  VAL SER LYS ARG LEU GLN LEU GLY LYS LEU THR VAL VAL          
SEQRES   7 B  171  ASP ALA THR ASN VAL GLN GLU SER ALA ARG LYS PRO LEU          
SEQRES   8 B  171  ILE GLU ILE ALA LYS ASP TYR HIS CYS PHE PRO VAL ALA          
SEQRES   9 B  171  VAL VAL PHE ASN LEU PRO GLU LYS VAL CYS GLN GLU ARG          
SEQRES  10 B  171  ASN LYS ASN ARG THR ASP ARG GLN VAL GLU GLU TYR VAL          
SEQRES  11 B  171  ILE ARG LYS HIS THR GLN GLN MSE LYS LYS SER ILE LYS          
SEQRES  12 B  171  GLY LEU GLN ARG GLU GLY PHE ARG TYR VAL TYR ILE LEU          
SEQRES  13 B  171  ASN SER PRO GLU GLU VAL GLU GLU VAL VAL PHE GLU ARG          
SEQRES  14 B  171  GLN PRO                                                      
MODRES 4JT2 MSE A    1  MET  SELENOMETHIONINE                                   
MODRES 4JT2 MSE A   44  MET  SELENOMETHIONINE                                   
MODRES 4JT2 MSE A  137  MET  SELENOMETHIONINE                                   
MODRES 4JT2 MSE B    1  MET  SELENOMETHIONINE                                   
MODRES 4JT2 MSE B   44  MET  SELENOMETHIONINE                                   
MODRES 4JT2 MSE B  137  MET  SELENOMETHIONINE                                   
HET    MSE  A   1       8                                                       
HET    MSE  A  44       8                                                       
HET    MSE  A 137       8                                                       
HET    MSE  B   1       8                                                       
HET    MSE  B  44       8                                                       
HET    MSE  B 137       8                                                       
HET     MG  A 201       1                                                       
HET    CTP  A 202      29                                                       
HET    CTP  B1001      29                                                       
HET     MG  B1002       1                                                       
HETNAM     MSE SELENOMETHIONINE                                                 
HETNAM      MG MAGNESIUM ION                                                    
HETNAM     CTP CYTIDINE-5'-TRIPHOSPHATE                                         
FORMUL   1  MSE    6(C5 H11 N O2 SE)                                            
FORMUL   3   MG    2(MG 2+)                                                     
FORMUL   4  CTP    2(C9 H16 N3 O14 P3)                                          
FORMUL   7  HOH   *126(H2 O)                                                    
HELIX    1   1 GLY A   20  PHE A   29  1                                  10    
HELIX    2   2 LYS A   30  THR A   32  5                                   3    
HELIX    3   3 SER A   37  SER A   45  1                                   9    
HELIX    4   4 ASP A   50  THR A   52  5                                   3    
HELIX    5   5 VAL A   53  LEU A   71  1                                  19    
HELIX    6   6 GLN A   83  TYR A   97  1                                  15    
HELIX    7   7 PRO A  109  ARG A  120  1                                  12    
HELIX    8   8 GLU A  126  ILE A  141  1                                  16    
HELIX    9   9 GLY A  143  GLY A  148  1                                   6    
HELIX   10  10 SER A  157  GLU A  163  1                                   7    
HELIX   11  11 GLY B   20  PHE B   29  1                                  10    
HELIX   12  12 LYS B   30  THR B   32  5                                   3    
HELIX   13  13 SER B   37  SER B   45  1                                   9    
HELIX   14  14 ASP B   50  THR B   52  5                                   3    
HELIX   15  15 VAL B   53  LEU B   71  1                                  19    
HELIX   16  16 GLN B   83  TYR B   97  1                                  15    
HELIX   17  17 PRO B  109  ARG B  120  1                                  12    
HELIX   18  18 GLU B  126  ILE B  141  1                                  16    
HELIX   19  19 GLY B  143  GLY B  148  1                                   6    
HELIX   20  20 SER B  157  GLU B  163  1                                   7    
SHEET    1   A 2 MSE A   1  PRO A   6  0                                        
SHEET    2   A 2 VAL A 164  GLN A 169  1  O  GLU A 167   N  LEU A   3           
SHEET    1   B 5 VAL A  34  SER A  36  0                                        
SHEET    2   B 5 THR A  75  ASP A  78  1  O  VAL A  76   N  ILE A  35           
SHEET    3   B 5 SER A   9  ILE A  14  1  N  VAL A  11   O  VAL A  77           
SHEET    4   B 5 PHE A 100  PHE A 106  1  O  VAL A 102   N  VAL A  12           
SHEET    5   B 5 TYR A 151  LEU A 155  1  O  TYR A 153   N  VAL A 105           
SHEET    1   C 2 MSE B   1  PRO B   6  0                                        
SHEET    2   C 2 VAL B 164  GLN B 169  1  O  GLU B 167   N  LEU B   3           
SHEET    1   D 5 VAL B  34  SER B  36  0                                        
SHEET    2   D 5 THR B  75  ASP B  78  1  O  VAL B  76   N  ILE B  35           
SHEET    3   D 5 SER B   9  ILE B  14  1  N  VAL B  11   O  VAL B  77           
SHEET    4   D 5 PHE B 100  PHE B 106  1  O  VAL B 102   N  VAL B  12           
SHEET    5   D 5 TYR B 151  LEU B 155  1  O  TYR B 153   N  VAL B 105           
LINK         C   SER A   0                 N   MSE A   1     1555   1555  1.33  
LINK         C   MSE A   1                 N   LYS A   2     1555   1555  1.33  
LINK         C   LEU A  43                 N   MSE A  44     1555   1555  1.33  
LINK         C   MSE A  44                 N   SER A  45     1555   1555  1.33  
LINK         C   GLN A 136                 N   MSE A 137     1555   1555  1.33  
LINK         C   MSE A 137                 N   LYS A 138     1555   1555  1.33  
LINK         C   SER B   0                 N   MSE B   1     1555   1555  1.33  
LINK         C   MSE B   1                 N   LYS B   2     1555   1555  1.33  
LINK         C   LEU B  43                 N   MSE B  44     1555   1555  1.33  
LINK         C   MSE B  44                 N   SER B  45     1555   1555  1.33  
LINK         C   GLN B 136                 N   MSE B 137     1555   1555  1.33  
LINK         C   MSE B 137                 N   LYS B 138     1555   1555  1.33  
LINK         OG  SER A  22                MG    MG A 201     1555   1555  2.19  
LINK        MG    MG A 201                 O3G CTP A 202     1555   1555  1.84  
LINK        MG    MG A 201                 O2B CTP A 202     1555   1555  1.97  
LINK        MG    MG A 201                 O   HOH A 301     1555   1555  1.98  
LINK        MG    MG A 201                 O   HOH A 330     1555   1555  2.08  
LINK        MG    MG A 201                 O   HOH A 366     1555   1555  1.85  
LINK         OG  SER B  22                MG    MG B1002     1555   1555  2.08  
LINK         O2B CTP B1001                MG    MG B1002     1555   1555  1.94  
LINK         O3G CTP B1001                MG    MG B1002     1555   1555  1.97  
LINK        MG    MG B1002                 O   HOH B1122     1555   1555  2.22  
LINK        MG    MG B1002                 O   HOH B1144     1555   1555  2.10  
LINK        MG    MG B1002                 O   HOH B1146     1555   1555  2.14  
SITE     1 AC1  6 SER A  22  ARG A 123  CTP A 202  HOH A 301                    
SITE     2 AC1  6 HOH A 330  HOH A 366                                          
SITE     1 AC2 18 SER A  16  SER A  17  GLY A  18  SER A  19                    
SITE     2 AC2 18 GLY A  20  LYS A  21  SER A  22  THR A  23                    
SITE     3 AC2 18 ARG A 116  ARG A 120  ARG A 123   MG A 201                    
SITE     4 AC2 18 HOH A 301  HOH A 310  HOH A 317  HOH A 330                    
SITE     5 AC2 18 HOH A 336  HOH A 366                                          
SITE     1 AC3 16 SER B  17  GLY B  18  GLY B  20  LYS B  21                    
SITE     2 AC3 16 SER B  22  THR B  23  ARG B 116  ARG B 120                    
SITE     3 AC3 16 ARG B 123   MG B1002  HOH B1122  HOH B1130                    
SITE     4 AC3 16 HOH B1135  HOH B1144  HOH B1146  HOH B1147                    
SITE     1 AC4  6 SER B  22  ARG B 123  CTP B1001  HOH B1122                    
SITE     2 AC4  6 HOH B1144  HOH B1146                                          
CRYST1   45.306   66.781  119.546  90.00  90.00  90.00 P 21 21 21    8          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.022072  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.014974  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.008365        0.00000