data_4JTM # _entry.id 4JTM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4JTM pdb_00004jtm 10.2210/pdb4jtm/pdb RCSB RCSB078488 ? ? WWPDB D_1000078488 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-07-03 2 'Structure model' 1 1 2013-07-17 3 'Structure model' 1 2 2013-09-11 4 'Structure model' 1 3 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.entry_id 4JTM _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-03-23 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3EZJ 'GspD (N0-N1-N2 domains) in complex with nanobody' unspecified PDB 3OSS 'GspD (N0-N1 domains) in complex with GspC (HR domain)' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Korotkov, K.V.' 1 'Delarosa, J.R.' 2 'Hol, W.G.J.' 3 # _citation.id primary _citation.title 'A dodecameric ring-like structure of the N0 domain of the type II secretin from enterotoxigenic Escherichia coli.' _citation.journal_abbrev J.Struct.Biol. _citation.journal_volume 18 _citation.page_first 354 _citation.page_last 362 _citation.year 2013 _citation.journal_id_ASTM JSBIEM _citation.country US _citation.journal_id_ISSN 1047-8477 _citation.journal_id_CSD 0803 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23820381 _citation.pdbx_database_id_DOI 10.1016/j.jsb.2013.06.013 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Korotkov, K.V.' 1 ? primary 'Delarosa, J.R.' 2 ? primary 'Hol, W.G.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Type II secretion system protein D' 8949.354 2 ? ? 'N0 domain' ? 2 water nat water 18.015 208 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GAMATFTANFKDTDLKSFIETVGANLNKTIIMGPGVQGKVSIRTMTPLNERQYYQLFLNLLEAQGYAVVPMENDVLKVVK S ; _entity_poly.pdbx_seq_one_letter_code_can ;GAMATFTANFKDTDLKSFIETVGANLNKTIIMGPGVQGKVSIRTMTPLNERQYYQLFLNLLEAQGYAVVPMENDVLKVVK S ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 MET n 1 4 ALA n 1 5 THR n 1 6 PHE n 1 7 THR n 1 8 ALA n 1 9 ASN n 1 10 PHE n 1 11 LYS n 1 12 ASP n 1 13 THR n 1 14 ASP n 1 15 LEU n 1 16 LYS n 1 17 SER n 1 18 PHE n 1 19 ILE n 1 20 GLU n 1 21 THR n 1 22 VAL n 1 23 GLY n 1 24 ALA n 1 25 ASN n 1 26 LEU n 1 27 ASN n 1 28 LYS n 1 29 THR n 1 30 ILE n 1 31 ILE n 1 32 MET n 1 33 GLY n 1 34 PRO n 1 35 GLY n 1 36 VAL n 1 37 GLN n 1 38 GLY n 1 39 LYS n 1 40 VAL n 1 41 SER n 1 42 ILE n 1 43 ARG n 1 44 THR n 1 45 MET n 1 46 THR n 1 47 PRO n 1 48 LEU n 1 49 ASN n 1 50 GLU n 1 51 ARG n 1 52 GLN n 1 53 TYR n 1 54 TYR n 1 55 GLN n 1 56 LEU n 1 57 PHE n 1 58 LEU n 1 59 ASN n 1 60 LEU n 1 61 LEU n 1 62 GLU n 1 63 ALA n 1 64 GLN n 1 65 GLY n 1 66 TYR n 1 67 ALA n 1 68 VAL n 1 69 VAL n 1 70 PRO n 1 71 MET n 1 72 GLU n 1 73 ASN n 1 74 ASP n 1 75 VAL n 1 76 LEU n 1 77 LYS n 1 78 VAL n 1 79 VAL n 1 80 LYS n 1 81 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ETEC_3237, GSPD' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'H10407 / ETEC' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 316401 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pRSF-NT _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 0 GLY GLY A . n A 1 2 ALA 2 1 1 ALA ALA A . n A 1 3 MET 3 2 2 MET MET A . n A 1 4 ALA 4 3 3 ALA ALA A . n A 1 5 THR 5 4 4 THR THR A . n A 1 6 PHE 6 5 5 PHE PHE A . n A 1 7 THR 7 6 6 THR THR A . n A 1 8 ALA 8 7 7 ALA ALA A . n A 1 9 ASN 9 8 8 ASN ASN A . n A 1 10 PHE 10 9 9 PHE PHE A . n A 1 11 LYS 11 10 10 LYS LYS A . n A 1 12 ASP 12 11 11 ASP ASP A . n A 1 13 THR 13 12 12 THR THR A . n A 1 14 ASP 14 13 13 ASP ASP A . n A 1 15 LEU 15 14 14 LEU LEU A . n A 1 16 LYS 16 15 15 LYS LYS A . n A 1 17 SER 17 16 16 SER SER A . n A 1 18 PHE 18 17 17 PHE PHE A . n A 1 19 ILE 19 18 18 ILE ILE A . n A 1 20 GLU 20 19 19 GLU GLU A . n A 1 21 THR 21 20 20 THR THR A . n A 1 22 VAL 22 21 21 VAL VAL A . n A 1 23 GLY 23 22 22 GLY GLY A . n A 1 24 ALA 24 23 23 ALA ALA A . n A 1 25 ASN 25 24 24 ASN ASN A . n A 1 26 LEU 26 25 25 LEU LEU A . n A 1 27 ASN 27 26 26 ASN ASN A . n A 1 28 LYS 28 27 27 LYS LYS A . n A 1 29 THR 29 28 28 THR THR A . n A 1 30 ILE 30 29 29 ILE ILE A . n A 1 31 ILE 31 30 30 ILE ILE A . n A 1 32 MET 32 31 31 MET MET A . n A 1 33 GLY 33 32 32 GLY GLY A . n A 1 34 PRO 34 33 33 PRO PRO A . n A 1 35 GLY 35 34 34 GLY GLY A . n A 1 36 VAL 36 35 35 VAL VAL A . n A 1 37 GLN 37 36 36 GLN GLN A . n A 1 38 GLY 38 37 37 GLY GLY A . n A 1 39 LYS 39 38 38 LYS LYS A . n A 1 40 VAL 40 39 39 VAL VAL A . n A 1 41 SER 41 40 40 SER SER A . n A 1 42 ILE 42 41 41 ILE ILE A . n A 1 43 ARG 43 42 42 ARG ARG A . n A 1 44 THR 44 43 43 THR THR A . n A 1 45 MET 45 44 44 MET MET A . n A 1 46 THR 46 45 45 THR THR A . n A 1 47 PRO 47 46 46 PRO PRO A . n A 1 48 LEU 48 47 47 LEU LEU A . n A 1 49 ASN 49 48 48 ASN ASN A . n A 1 50 GLU 50 49 49 GLU GLU A . n A 1 51 ARG 51 50 50 ARG ARG A . n A 1 52 GLN 52 51 51 GLN GLN A . n A 1 53 TYR 53 52 52 TYR TYR A . n A 1 54 TYR 54 53 53 TYR TYR A . n A 1 55 GLN 55 54 54 GLN GLN A . n A 1 56 LEU 56 55 55 LEU LEU A . n A 1 57 PHE 57 56 56 PHE PHE A . n A 1 58 LEU 58 57 57 LEU LEU A . n A 1 59 ASN 59 58 58 ASN ASN A . n A 1 60 LEU 60 59 59 LEU LEU A . n A 1 61 LEU 61 60 60 LEU LEU A . n A 1 62 GLU 62 61 61 GLU GLU A . n A 1 63 ALA 63 62 62 ALA ALA A . n A 1 64 GLN 64 63 63 GLN GLN A . n A 1 65 GLY 65 64 64 GLY GLY A . n A 1 66 TYR 66 65 65 TYR TYR A . n A 1 67 ALA 67 66 66 ALA ALA A . n A 1 68 VAL 68 67 67 VAL VAL A . n A 1 69 VAL 69 68 68 VAL VAL A . n A 1 70 PRO 70 69 69 PRO PRO A . n A 1 71 MET 71 70 70 MET MET A . n A 1 72 GLU 72 71 71 GLU GLU A . n A 1 73 ASN 73 72 72 ASN ASN A . n A 1 74 ASP 74 73 73 ASP ASP A . n A 1 75 VAL 75 74 74 VAL VAL A . n A 1 76 LEU 76 75 75 LEU LEU A . n A 1 77 LYS 77 76 76 LYS LYS A . n A 1 78 VAL 78 77 77 VAL VAL A . n A 1 79 VAL 79 78 78 VAL VAL A . n A 1 80 LYS 80 79 79 LYS LYS A . n A 1 81 SER 81 80 80 SER SER A . n B 1 1 GLY 1 0 0 GLY GLY B . n B 1 2 ALA 2 1 1 ALA ALA B . n B 1 3 MET 3 2 2 MET MET B . n B 1 4 ALA 4 3 3 ALA ALA B . n B 1 5 THR 5 4 4 THR THR B . n B 1 6 PHE 6 5 5 PHE PHE B . n B 1 7 THR 7 6 6 THR THR B . n B 1 8 ALA 8 7 7 ALA ALA B . n B 1 9 ASN 9 8 8 ASN ASN B . n B 1 10 PHE 10 9 9 PHE PHE B . n B 1 11 LYS 11 10 10 LYS LYS B . n B 1 12 ASP 12 11 11 ASP ASP B . n B 1 13 THR 13 12 12 THR THR B . n B 1 14 ASP 14 13 13 ASP ASP B . n B 1 15 LEU 15 14 14 LEU LEU B . n B 1 16 LYS 16 15 15 LYS LYS B . n B 1 17 SER 17 16 16 SER SER B . n B 1 18 PHE 18 17 17 PHE PHE B . n B 1 19 ILE 19 18 18 ILE ILE B . n B 1 20 GLU 20 19 19 GLU GLU B . n B 1 21 THR 21 20 20 THR THR B . n B 1 22 VAL 22 21 21 VAL VAL B . n B 1 23 GLY 23 22 22 GLY GLY B . n B 1 24 ALA 24 23 23 ALA ALA B . n B 1 25 ASN 25 24 24 ASN ASN B . n B 1 26 LEU 26 25 25 LEU LEU B . n B 1 27 ASN 27 26 26 ASN ASN B . n B 1 28 LYS 28 27 27 LYS LYS B . n B 1 29 THR 29 28 28 THR THR B . n B 1 30 ILE 30 29 29 ILE ILE B . n B 1 31 ILE 31 30 30 ILE ILE B . n B 1 32 MET 32 31 31 MET MET B . n B 1 33 GLY 33 32 32 GLY GLY B . n B 1 34 PRO 34 33 33 PRO PRO B . n B 1 35 GLY 35 34 34 GLY GLY B . n B 1 36 VAL 36 35 35 VAL VAL B . n B 1 37 GLN 37 36 36 GLN GLN B . n B 1 38 GLY 38 37 37 GLY GLY B . n B 1 39 LYS 39 38 38 LYS LYS B . n B 1 40 VAL 40 39 39 VAL VAL B . n B 1 41 SER 41 40 40 SER SER B . n B 1 42 ILE 42 41 41 ILE ILE B . n B 1 43 ARG 43 42 42 ARG ARG B . n B 1 44 THR 44 43 43 THR THR B . n B 1 45 MET 45 44 44 MET MET B . n B 1 46 THR 46 45 45 THR THR B . n B 1 47 PRO 47 46 46 PRO PRO B . n B 1 48 LEU 48 47 47 LEU LEU B . n B 1 49 ASN 49 48 48 ASN ASN B . n B 1 50 GLU 50 49 49 GLU GLU B . n B 1 51 ARG 51 50 50 ARG ARG B . n B 1 52 GLN 52 51 51 GLN GLN B . n B 1 53 TYR 53 52 52 TYR TYR B . n B 1 54 TYR 54 53 53 TYR TYR B . n B 1 55 GLN 55 54 54 GLN GLN B . n B 1 56 LEU 56 55 55 LEU LEU B . n B 1 57 PHE 57 56 56 PHE PHE B . n B 1 58 LEU 58 57 57 LEU LEU B . n B 1 59 ASN 59 58 58 ASN ASN B . n B 1 60 LEU 60 59 59 LEU LEU B . n B 1 61 LEU 61 60 60 LEU LEU B . n B 1 62 GLU 62 61 61 GLU GLU B . n B 1 63 ALA 63 62 62 ALA ALA B . n B 1 64 GLN 64 63 63 GLN GLN B . n B 1 65 GLY 65 64 64 GLY GLY B . n B 1 66 TYR 66 65 65 TYR TYR B . n B 1 67 ALA 67 66 66 ALA ALA B . n B 1 68 VAL 68 67 67 VAL VAL B . n B 1 69 VAL 69 68 68 VAL VAL B . n B 1 70 PRO 70 69 69 PRO PRO B . n B 1 71 MET 71 70 70 MET MET B . n B 1 72 GLU 72 71 71 GLU GLU B . n B 1 73 ASN 73 72 72 ASN ASN B . n B 1 74 ASP 74 73 73 ASP ASP B . n B 1 75 VAL 75 74 74 VAL VAL B . n B 1 76 LEU 76 75 75 LEU LEU B . n B 1 77 LYS 77 76 76 LYS LYS B . n B 1 78 VAL 78 77 77 VAL VAL B . n B 1 79 VAL 79 78 78 VAL VAL B . n B 1 80 LYS 80 79 79 LYS LYS B . n B 1 81 SER 81 80 80 SER SER B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 101 2 HOH HOH A . C 2 HOH 2 102 6 HOH HOH A . C 2 HOH 3 103 7 HOH HOH A . C 2 HOH 4 104 8 HOH HOH A . C 2 HOH 5 105 11 HOH HOH A . C 2 HOH 6 106 12 HOH HOH A . C 2 HOH 7 107 14 HOH HOH A . C 2 HOH 8 108 15 HOH HOH A . C 2 HOH 9 109 16 HOH HOH A . C 2 HOH 10 110 20 HOH HOH A . C 2 HOH 11 111 22 HOH HOH A . C 2 HOH 12 112 23 HOH HOH A . C 2 HOH 13 113 25 HOH HOH A . C 2 HOH 14 114 26 HOH HOH A . C 2 HOH 15 115 31 HOH HOH A . C 2 HOH 16 116 32 HOH HOH A . C 2 HOH 17 117 35 HOH HOH A . C 2 HOH 18 118 37 HOH HOH A . C 2 HOH 19 119 43 HOH HOH A . C 2 HOH 20 120 45 HOH HOH A . C 2 HOH 21 121 46 HOH HOH A . C 2 HOH 22 122 48 HOH HOH A . C 2 HOH 23 123 49 HOH HOH A . C 2 HOH 24 124 50 HOH HOH A . C 2 HOH 25 125 51 HOH HOH A . C 2 HOH 26 126 54 HOH HOH A . C 2 HOH 27 127 55 HOH HOH A . C 2 HOH 28 128 56 HOH HOH A . C 2 HOH 29 129 57 HOH HOH A . C 2 HOH 30 130 58 HOH HOH A . C 2 HOH 31 131 59 HOH HOH A . C 2 HOH 32 132 60 HOH HOH A . C 2 HOH 33 133 61 HOH HOH A . C 2 HOH 34 134 63 HOH HOH A . C 2 HOH 35 135 64 HOH HOH A . C 2 HOH 36 136 65 HOH HOH A . C 2 HOH 37 137 68 HOH HOH A . C 2 HOH 38 138 69 HOH HOH A . C 2 HOH 39 139 70 HOH HOH A . C 2 HOH 40 140 71 HOH HOH A . C 2 HOH 41 141 74 HOH HOH A . C 2 HOH 42 142 80 HOH HOH A . C 2 HOH 43 143 81 HOH HOH A . C 2 HOH 44 144 83 HOH HOH A . C 2 HOH 45 145 85 HOH HOH A . C 2 HOH 46 146 87 HOH HOH A . C 2 HOH 47 147 91 HOH HOH A . C 2 HOH 48 148 92 HOH HOH A . C 2 HOH 49 149 94 HOH HOH A . C 2 HOH 50 150 96 HOH HOH A . C 2 HOH 51 151 100 HOH HOH A . C 2 HOH 52 152 101 HOH HOH A . C 2 HOH 53 153 102 HOH HOH A . C 2 HOH 54 154 107 HOH HOH A . C 2 HOH 55 155 109 HOH HOH A . C 2 HOH 56 156 112 HOH HOH A . C 2 HOH 57 157 114 HOH HOH A . C 2 HOH 58 158 116 HOH HOH A . C 2 HOH 59 159 118 HOH HOH A . C 2 HOH 60 160 122 HOH HOH A . C 2 HOH 61 161 123 HOH HOH A . C 2 HOH 62 162 124 HOH HOH A . C 2 HOH 63 163 127 HOH HOH A . C 2 HOH 64 164 128 HOH HOH A . C 2 HOH 65 165 129 HOH HOH A . C 2 HOH 66 166 130 HOH HOH A . C 2 HOH 67 167 131 HOH HOH A . C 2 HOH 68 168 132 HOH HOH A . C 2 HOH 69 169 133 HOH HOH A . C 2 HOH 70 170 134 HOH HOH A . C 2 HOH 71 171 135 HOH HOH A . C 2 HOH 72 172 136 HOH HOH A . C 2 HOH 73 173 137 HOH HOH A . C 2 HOH 74 174 138 HOH HOH A . C 2 HOH 75 175 139 HOH HOH A . C 2 HOH 76 176 153 HOH HOH A . C 2 HOH 77 177 157 HOH HOH A . C 2 HOH 78 178 158 HOH HOH A . C 2 HOH 79 179 159 HOH HOH A . C 2 HOH 80 180 160 HOH HOH A . C 2 HOH 81 181 161 HOH HOH A . C 2 HOH 82 182 162 HOH HOH A . C 2 HOH 83 183 163 HOH HOH A . C 2 HOH 84 184 164 HOH HOH A . C 2 HOH 85 185 165 HOH HOH A . C 2 HOH 86 186 166 HOH HOH A . C 2 HOH 87 187 167 HOH HOH A . C 2 HOH 88 188 168 HOH HOH A . C 2 HOH 89 189 169 HOH HOH A . C 2 HOH 90 190 170 HOH HOH A . C 2 HOH 91 191 171 HOH HOH A . C 2 HOH 92 192 172 HOH HOH A . C 2 HOH 93 193 186 HOH HOH A . C 2 HOH 94 194 187 HOH HOH A . C 2 HOH 95 195 192 HOH HOH A . C 2 HOH 96 196 193 HOH HOH A . C 2 HOH 97 197 194 HOH HOH A . C 2 HOH 98 198 195 HOH HOH A . C 2 HOH 99 199 196 HOH HOH A . C 2 HOH 100 200 197 HOH HOH A . C 2 HOH 101 201 198 HOH HOH A . C 2 HOH 102 202 202 HOH HOH A . C 2 HOH 103 203 203 HOH HOH A . C 2 HOH 104 204 204 HOH HOH A . C 2 HOH 105 205 205 HOH HOH A . D 2 HOH 1 101 1 HOH HOH B . D 2 HOH 2 102 3 HOH HOH B . D 2 HOH 3 103 4 HOH HOH B . D 2 HOH 4 104 5 HOH HOH B . D 2 HOH 5 105 9 HOH HOH B . D 2 HOH 6 106 10 HOH HOH B . D 2 HOH 7 107 13 HOH HOH B . D 2 HOH 8 108 17 HOH HOH B . D 2 HOH 9 109 18 HOH HOH B . D 2 HOH 10 110 19 HOH HOH B . D 2 HOH 11 111 21 HOH HOH B . D 2 HOH 12 112 24 HOH HOH B . D 2 HOH 13 113 27 HOH HOH B . D 2 HOH 14 114 28 HOH HOH B . D 2 HOH 15 115 29 HOH HOH B . D 2 HOH 16 116 30 HOH HOH B . D 2 HOH 17 117 33 HOH HOH B . D 2 HOH 18 118 34 HOH HOH B . D 2 HOH 19 119 36 HOH HOH B . D 2 HOH 20 120 38 HOH HOH B . D 2 HOH 21 121 39 HOH HOH B . D 2 HOH 22 122 40 HOH HOH B . D 2 HOH 23 123 41 HOH HOH B . D 2 HOH 24 124 42 HOH HOH B . D 2 HOH 25 125 44 HOH HOH B . D 2 HOH 26 126 47 HOH HOH B . D 2 HOH 27 127 52 HOH HOH B . D 2 HOH 28 128 53 HOH HOH B . D 2 HOH 29 129 62 HOH HOH B . D 2 HOH 30 130 66 HOH HOH B . D 2 HOH 31 131 67 HOH HOH B . D 2 HOH 32 132 72 HOH HOH B . D 2 HOH 33 133 73 HOH HOH B . D 2 HOH 34 134 75 HOH HOH B . D 2 HOH 35 135 76 HOH HOH B . D 2 HOH 36 136 77 HOH HOH B . D 2 HOH 37 137 78 HOH HOH B . D 2 HOH 38 138 79 HOH HOH B . D 2 HOH 39 139 82 HOH HOH B . D 2 HOH 40 140 84 HOH HOH B . D 2 HOH 41 141 86 HOH HOH B . D 2 HOH 42 142 88 HOH HOH B . D 2 HOH 43 143 89 HOH HOH B . D 2 HOH 44 144 90 HOH HOH B . D 2 HOH 45 145 93 HOH HOH B . D 2 HOH 46 146 95 HOH HOH B . D 2 HOH 47 147 97 HOH HOH B . D 2 HOH 48 148 98 HOH HOH B . D 2 HOH 49 149 99 HOH HOH B . D 2 HOH 50 150 103 HOH HOH B . D 2 HOH 51 151 104 HOH HOH B . D 2 HOH 52 152 105 HOH HOH B . D 2 HOH 53 153 106 HOH HOH B . D 2 HOH 54 154 108 HOH HOH B . D 2 HOH 55 155 110 HOH HOH B . D 2 HOH 56 156 111 HOH HOH B . D 2 HOH 57 157 113 HOH HOH B . D 2 HOH 58 158 115 HOH HOH B . D 2 HOH 59 159 117 HOH HOH B . D 2 HOH 60 160 119 HOH HOH B . D 2 HOH 61 161 120 HOH HOH B . D 2 HOH 62 162 121 HOH HOH B . D 2 HOH 63 163 125 HOH HOH B . D 2 HOH 64 164 126 HOH HOH B . D 2 HOH 65 165 140 HOH HOH B . D 2 HOH 66 166 141 HOH HOH B . D 2 HOH 67 167 142 HOH HOH B . D 2 HOH 68 168 143 HOH HOH B . D 2 HOH 69 169 144 HOH HOH B . D 2 HOH 70 170 145 HOH HOH B . D 2 HOH 71 171 146 HOH HOH B . D 2 HOH 72 172 147 HOH HOH B . D 2 HOH 73 173 148 HOH HOH B . D 2 HOH 74 174 149 HOH HOH B . D 2 HOH 75 175 150 HOH HOH B . D 2 HOH 76 176 151 HOH HOH B . D 2 HOH 77 177 152 HOH HOH B . D 2 HOH 78 178 154 HOH HOH B . D 2 HOH 79 179 155 HOH HOH B . D 2 HOH 80 180 156 HOH HOH B . D 2 HOH 81 181 173 HOH HOH B . D 2 HOH 82 182 174 HOH HOH B . D 2 HOH 83 183 175 HOH HOH B . D 2 HOH 84 184 176 HOH HOH B . D 2 HOH 85 185 177 HOH HOH B . D 2 HOH 86 186 178 HOH HOH B . D 2 HOH 87 187 179 HOH HOH B . D 2 HOH 88 188 180 HOH HOH B . D 2 HOH 89 189 181 HOH HOH B . D 2 HOH 90 190 182 HOH HOH B . D 2 HOH 91 191 183 HOH HOH B . D 2 HOH 92 192 184 HOH HOH B . D 2 HOH 93 193 185 HOH HOH B . D 2 HOH 94 194 188 HOH HOH B . D 2 HOH 95 195 189 HOH HOH B . D 2 HOH 96 196 190 HOH HOH B . D 2 HOH 97 197 191 HOH HOH B . D 2 HOH 98 198 199 HOH HOH B . D 2 HOH 99 199 200 HOH HOH B . D 2 HOH 100 200 201 HOH HOH B . D 2 HOH 101 201 206 HOH HOH B . D 2 HOH 102 202 207 HOH HOH B . D 2 HOH 103 203 208 HOH HOH B . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 Blu-Ice . ? ? ? ? 'data collection' ? ? ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? # _cell.length_a 113.460 _cell.length_b 113.460 _cell.length_c 24.450 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 4JTM _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 61' _symmetry.entry_id 4JTM _symmetry.Int_Tables_number 169 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 4JTM _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.54 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 51.54 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.1M TRIS-HCL, 30% PEG2000-MME, pH 8.5, vapor diffusion, sitting drop, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2011-05-21 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'DOUBLE CRYSTAL' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL12-2' _diffrn_source.pdbx_wavelength_list 0.9795 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL12-2 # _reflns.entry_id 4JTM _reflns.d_resolution_high 1.430 _reflns.number_obs 59059 _reflns.pdbx_Rmerge_I_obs 0.044 _reflns.pdbx_netI_over_sigmaI 19.090 _reflns.percent_possible_obs 90.800 _reflns.B_iso_Wilson_estimate 25.311 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 49.180 _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.430 1.470 9245 ? 2759 0.672 2.070 ? ? ? ? ? 57.400 1 1 1.470 1.510 11221 ? 3098 0.464 3.090 ? ? ? ? ? 65.700 2 1 1.510 1.550 14107 ? 3517 0.353 4.270 ? ? ? ? ? 77.300 3 1 1.550 1.600 17718 ? 4060 0.278 5.490 ? ? ? ? ? 92.000 4 1 1.600 1.650 22493 ? 4177 0.227 7.840 ? ? ? ? ? 96.200 5 1 1.650 1.710 21657 ? 3992 0.187 9.260 ? ? ? ? ? 97.200 6 1 1.710 1.770 20612 ? 3922 0.137 11.600 ? ? ? ? ? 97.400 7 1 1.770 1.850 19129 ? 3775 0.110 13.630 ? ? ? ? ? 97.800 8 1 1.850 1.930 19707 ? 3628 0.083 17.700 ? ? ? ? ? 98.000 9 1 1.930 2.020 18812 ? 3475 0.064 21.720 ? ? ? ? ? 97.500 10 1 2.020 2.130 16912 ? 3317 0.055 24.220 ? ? ? ? ? 99.100 11 1 2.130 2.260 15608 ? 3077 0.047 27.230 ? ? ? ? ? 97.100 12 1 2.260 2.420 15820 ? 2993 0.044 30.470 ? ? ? ? ? 98.900 13 1 2.420 2.610 14161 ? 2697 0.040 32.810 ? ? ? ? ? 99.000 14 1 2.610 2.860 12394 ? 2516 0.036 35.070 ? ? ? ? ? 97.800 15 1 2.860 3.200 12087 ? 2292 0.036 39.010 ? ? ? ? ? 99.000 16 1 3.200 3.690 10393 ? 2012 0.034 40.150 ? ? ? ? ? 99.300 17 1 3.690 4.520 8411 ? 1709 0.032 42.670 ? ? ? ? ? 98.200 18 1 4.520 6.400 7054 ? 1338 0.033 45.580 ? ? ? ? ? 99.700 19 1 6.400 ? 3740 ? 705 0.030 45.590 ? ? ? ? ? 97.800 20 1 # _refine.entry_id 4JTM _refine.ls_d_res_high 1.4300 _refine.ls_d_res_low 49.1800 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 92.7400 _refine.ls_number_reflns_obs 31494 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1869 _refine.ls_R_factor_R_work 0.1852 _refine.ls_wR_factor_R_work 0.1934 _refine.ls_R_factor_R_free 0.2192 _refine.ls_wR_factor_R_free 0.2269 _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 1612 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 22.4763 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.1600 _refine.aniso_B[2][2] -0.1600 _refine.aniso_B[3][3] 0.5300 _refine.aniso_B[1][2] -0.1600 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9630 _refine.correlation_coeff_Fo_to_Fc_free 0.9480 _refine.overall_SU_R_Cruickshank_DPI 0.0684 _refine.overall_SU_R_free 0.0726 _refine.pdbx_overall_ESU_R 0.0680 _refine.pdbx_overall_ESU_R_Free 0.0730 _refine.overall_SU_ML 0.0460 _refine.overall_SU_B 2.2960 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8652 _refine.B_iso_max 59.690 _refine.B_iso_min 9.870 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1254 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 208 _refine_hist.number_atoms_total 1462 _refine_hist.d_res_high 1.4300 _refine_hist.d_res_low 49.1800 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1283 0.015 0.020 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1281 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1737 1.694 1.980 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 2947 0.808 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 164 5.880 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 52 38.690 25.769 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 237 12.900 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 4 26.478 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 206 0.097 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1448 0.009 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 276 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 650 0.819 0.881 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 649 0.812 0.878 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 810 1.308 1.316 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.4300 _refine_ls_shell.d_res_low 1.4670 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 61.5700 _refine_ls_shell.number_reflns_R_work 1439 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2410 _refine_ls_shell.R_factor_R_free 0.2690 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 86 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1525 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4JTM _struct.title 'Structure of the N0 domain of the type II secretin from enterotoxigenic Escherichia coli' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4JTM _struct_keywords.text 'general secretory pathway, secretin, protein transport' _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code E3PJ86_ECOH1 _struct_ref.pdbx_db_accession E3PJ86 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ATFTANFKDTDLKSFIETVGANLNKTIIMGPGVQGKVSIRTMTPLNERQYYQLFLNLLEAQGYAVVPMENDVLKVVKS _struct_ref.pdbx_align_begin 43 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4JTM A 4 ? 81 ? E3PJ86 43 ? 120 ? 3 80 2 1 4JTM B 4 ? 81 ? E3PJ86 43 ? 120 ? 3 80 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4JTM GLY A 1 ? UNP E3PJ86 ? ? 'expression tag' 0 1 1 4JTM ALA A 2 ? UNP E3PJ86 ? ? 'expression tag' 1 2 1 4JTM MET A 3 ? UNP E3PJ86 ? ? 'expression tag' 2 3 2 4JTM GLY B 1 ? UNP E3PJ86 ? ? 'expression tag' 0 4 2 4JTM ALA B 2 ? UNP E3PJ86 ? ? 'expression tag' 1 5 2 4JTM MET B 3 ? UNP E3PJ86 ? ? 'expression tag' 2 6 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 890 ? 1 MORE -5 ? 1 'SSA (A^2)' 9560 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C 1 2 B,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_655 -x+y+1,-x,z+2/3 -0.5000000000 0.8660254038 0.0000000000 113.4600000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 16.3000000000 # _struct_biol.id 1 _struct_biol.details ;BIOLOGICAL UNIT OF FULL-LENGTH GSPD IS A DODECAMER, THE HIGH-RESOLUTION DETAILS OF THIS ASSEMBLY ARE CURRENTLY UNAVAILABLE ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 15 ? ASN A 27 ? LEU A 14 ASN A 26 1 ? 13 HELX_P HELX_P2 2 ASN A 49 ? GLY A 65 ? ASN A 48 GLY A 64 1 ? 17 HELX_P HELX_P3 3 LEU B 15 ? LEU B 26 ? LEU B 14 LEU B 25 1 ? 12 HELX_P HELX_P4 4 ASN B 49 ? GLN B 64 ? ASN B 48 GLN B 63 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? C ? 2 ? D ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? parallel D 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASN A 9 ? ASP A 14 ? ASN A 8 ASP A 13 A 2 LYS A 39 ? ARG A 43 ? LYS A 38 ARG A 42 B 1 THR A 29 ? MET A 32 ? THR A 28 MET A 31 B 2 VAL A 75 ? LYS A 80 ? VAL A 74 LYS A 79 B 3 TYR A 66 ? MET A 71 ? TYR A 65 MET A 70 C 1 ASN B 9 ? ASP B 14 ? ASN B 8 ASP B 13 C 2 LYS B 39 ? ARG B 43 ? LYS B 38 ARG B 42 D 1 THR B 29 ? MET B 32 ? THR B 28 MET B 31 D 2 VAL B 75 ? LYS B 80 ? VAL B 74 LYS B 79 D 3 TYR B 66 ? MET B 71 ? TYR B 65 MET B 70 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 13 ? N THR A 12 O VAL A 40 ? O VAL A 39 B 1 2 N ILE A 31 ? N ILE A 30 O VAL A 78 ? O VAL A 77 B 2 3 O VAL A 79 ? O VAL A 78 N ALA A 67 ? N ALA A 66 C 1 2 N PHE B 10 ? N PHE B 9 O ILE B 42 ? O ILE B 41 D 1 2 N THR B 29 ? N THR B 28 O LEU B 76 ? O LEU B 75 D 2 3 O VAL B 79 ? O VAL B 78 N ALA B 67 ? N ALA B 66 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 8 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -155.14 _pdbx_validate_torsion.psi 79.73 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 60.9520 -13.4370 -2.4180 0.1138 0.1104 0.1857 -0.0167 0.0873 -0.0148 15.7090 9.2031 10.1376 -11.0703 4.7341 0.0839 -0.0948 -0.0375 0.1323 0.2427 0.1301 -0.1538 0.0829 0.1776 0.3526 'X-RAY DIFFRACTION' 2 ? refined 48.9870 -5.7840 -10.0760 0.1238 0.0886 0.2045 -0.0590 -0.0662 0.0836 19.4070 4.5918 12.7388 -9.1947 11.3382 -6.5670 -0.0845 -0.0980 0.1825 0.1424 -0.3160 0.0958 0.0994 -0.3474 0.3087 'X-RAY DIFFRACTION' 3 ? refined 38.2580 -8.9810 -10.0330 0.1058 0.0969 0.0973 -0.0288 -0.0855 0.0613 4.8818 17.2050 9.2325 0.9260 -5.4389 -8.3800 -0.1522 0.5094 -0.3572 0.2478 0.1219 0.5136 -0.3625 0.3141 -0.4881 'X-RAY DIFFRACTION' 4 ? refined 42.4710 -14.0150 -8.2420 0.1453 0.0953 0.0458 -0.0585 -0.0043 0.0292 11.3265 14.1419 6.9471 -6.7048 1.1747 1.4228 0.0984 0.0942 -0.1926 0.6763 0.1702 0.0796 -0.7895 -0.2131 -0.1756 'X-RAY DIFFRACTION' 5 ? refined 49.6050 -18.9190 -5.5740 0.0532 0.0822 0.0832 -0.0542 0.0327 -0.0389 5.8282 15.1714 5.6442 1.0973 2.0075 -1.8546 -0.0233 0.1095 -0.0861 -0.2177 -0.2509 -0.3138 -0.1499 -0.1027 -0.0879 'X-RAY DIFFRACTION' 6 ? refined 41.0970 -22.1420 -3.2630 0.0941 0.0560 0.0815 -0.0298 0.0044 0.0015 22.1564 5.9716 3.9834 -1.0678 -2.8640 2.6891 -0.0932 0.0167 0.0765 -0.0260 0.3178 0.1319 -0.1057 -0.1509 0.0220 'X-RAY DIFFRACTION' 7 ? refined 32.1240 -11.7080 -5.0650 0.0412 0.1038 0.1903 -0.0107 -0.0510 0.0095 13.0599 34.8616 13.1570 10.1349 -8.3145 -18.3014 -0.0364 0.8317 -0.7953 0.6949 0.7584 1.6332 -0.3195 0.1082 -0.3666 'X-RAY DIFFRACTION' 8 ? refined 48.8920 -2.6650 -6.4440 0.1805 0.1334 0.1797 -0.0817 -0.0667 0.0788 20.9381 2.2200 2.7114 -0.1134 7.4205 0.3837 0.0042 -0.0003 -0.0040 -0.1473 -0.1484 0.2575 -0.3743 -0.0776 -0.0448 'X-RAY DIFFRACTION' 9 ? refined 56.5780 -10.4640 0.8800 0.0609 0.0665 0.0864 -0.0010 -0.0006 -0.0045 7.6620 11.7434 3.8299 2.1577 -1.6881 -5.1516 0.0825 0.1481 -0.2306 -0.0411 0.1093 0.0864 -0.0636 -0.0714 -0.0295 'X-RAY DIFFRACTION' 10 ? refined 50.8210 -11.9660 2.3630 0.0830 0.0761 0.0948 -0.0138 -0.0007 0.0230 4.9451 5.5135 3.2591 0.4381 2.9209 3.1554 -0.0927 0.0792 0.0135 -0.0056 -0.0859 0.0871 0.0497 -0.0282 0.0350 'X-RAY DIFFRACTION' 11 ? refined 43.5030 -9.2210 2.5240 0.0738 0.0462 0.0836 -0.0116 -0.0096 0.0075 15.0774 4.9971 1.5621 -1.0726 -1.0872 1.0580 -0.0865 -0.0255 0.1119 -0.0546 0.0116 0.1154 0.0595 -0.0443 -0.0006 'X-RAY DIFFRACTION' 12 ? refined 36.9730 -10.4850 2.6100 0.0447 0.0740 0.2413 0.0059 -0.0175 -0.0556 10.9956 9.9016 4.9140 5.6281 3.8605 4.8375 -0.0990 -0.1462 0.2452 0.2836 0.2005 1.1609 -0.2583 -0.0801 0.0297 'X-RAY DIFFRACTION' 13 ? refined 43.5970 -26.4840 3.2410 0.1290 0.0867 0.1036 0.0226 -0.0031 0.0087 4.1601 4.5832 3.3991 -1.0758 1.7296 1.7507 -0.2107 0.2324 -0.0217 -0.3150 -0.1531 -0.1722 0.3944 0.0999 0.0556 'X-RAY DIFFRACTION' 14 ? refined 37.0270 -18.2930 2.5270 0.0647 0.0637 0.0913 -0.0097 0.0091 -0.0096 5.6438 11.8352 2.3782 0.4535 -1.7216 1.4896 0.0592 -0.0147 -0.0445 -0.2209 0.3125 0.7868 0.2703 0.0230 -0.0644 'X-RAY DIFFRACTION' 15 ? refined 45.8870 -40.7180 -8.3720 0.0695 0.0366 0.1328 0.0219 0.0102 -0.0204 12.2995 10.2135 10.9291 -1.4001 5.0366 -1.5816 0.2223 -0.0633 -0.1590 0.2077 -0.8226 -0.4398 -0.0375 0.6752 0.5581 'X-RAY DIFFRACTION' 16 ? refined 37.3990 -26.8990 -13.4660 0.1830 0.0957 0.1121 0.0528 -0.0693 -0.0381 14.6154 23.7135 1.1470 -15.2609 1.2579 -3.8859 0.5121 -0.5730 0.0609 0.6779 -0.2842 0.3926 -0.3678 -0.1604 -0.0410 'X-RAY DIFFRACTION' 17 ? refined 26.7990 -25.8910 -11.7920 0.0866 0.0641 0.1516 0.0290 -0.0038 0.0213 13.0874 16.0653 5.5635 8.7232 -5.5727 -5.6794 0.0455 0.1841 -0.2296 0.2178 0.2453 0.8047 0.0248 -0.1470 -0.3965 'X-RAY DIFFRACTION' 18 ? refined 28.4590 -32.8660 -10.5160 0.0222 0.0212 0.1794 0.0024 0.0018 0.0255 9.7459 7.6763 6.5049 -3.9717 1.0057 -1.2501 0.0251 0.0423 -0.0675 0.1694 0.2113 0.1211 -0.2129 -0.2706 -0.1633 'X-RAY DIFFRACTION' 19 ? refined 32.8540 -40.1620 -8.6270 0.0135 0.0619 0.0946 0.0137 0.0140 -0.0001 4.7464 24.2331 10.9262 2.5680 1.5807 -7.1731 -0.1671 0.1215 0.0455 -0.3391 0.1093 0.3424 0.1307 0.0226 -0.1372 'X-RAY DIFFRACTION' 20 ? refined 24.1410 -39.1490 -5.0090 0.1532 0.1507 0.2297 -0.0665 0.0154 0.0279 18.1917 15.4599 6.5494 -16.6189 -4.1028 4.9674 -0.4459 0.2977 0.1481 -0.3254 0.2954 -0.2156 0.3263 -0.0568 0.0030 'X-RAY DIFFRACTION' 21 ? refined 22.1510 -25.3740 -7.0850 0.1154 0.1048 0.3386 0.0515 0.0198 0.0089 15.1794 14.1030 4.8050 13.4879 -6.7826 -7.8124 0.2374 0.4115 -0.6488 0.1103 1.5672 1.5126 0.3272 -0.3319 -0.3729 'X-RAY DIFFRACTION' 22 ? refined 40.8540 -24.9980 -9.7100 0.1825 0.0787 0.1359 -0.0087 0.0824 -0.0163 23.9451 7.7432 1.4185 -11.2496 2.3520 -1.9839 0.1951 -0.0389 -0.1561 -0.5416 0.9416 -0.4586 -0.3386 -0.2272 0.0822 'X-RAY DIFFRACTION' 23 ? refined 43.9450 -36.6630 -4.6580 0.0755 0.0654 0.0912 0.0087 -0.0093 -0.0169 9.4604 8.2365 7.6280 -0.8840 -3.3925 -2.9738 -0.2237 0.1956 0.0281 -0.0750 -0.1151 -0.4050 0.2270 -0.0076 0.1649 'X-RAY DIFFRACTION' 24 ? refined 38.7870 -35.8610 -2.1930 0.0877 0.0578 0.0742 -0.0033 0.0032 0.0168 5.0848 4.5873 3.6132 0.3938 0.3000 1.5931 0.0088 0.0557 -0.0645 -0.0851 -0.3148 0.1216 0.1999 0.0555 0.0604 'X-RAY DIFFRACTION' 25 ? refined 34.6320 -30.5260 -1.1950 0.0661 0.0413 0.0733 -0.0065 0.0184 0.0092 7.9685 14.9172 2.0939 -0.5734 -0.6856 1.6931 0.0594 -0.1219 0.0626 0.1989 0.0269 0.5663 0.0005 0.0602 -0.0729 'X-RAY DIFFRACTION' 26 ? refined 28.3190 -25.8750 0.2470 0.0666 0.0623 0.1968 -0.0361 0.0522 -0.0170 21.4198 16.3917 12.0960 -5.5658 10.9722 5.2892 -0.0543 -0.4116 0.4658 -0.2309 0.3233 0.8091 0.0875 0.0968 -0.6046 'X-RAY DIFFRACTION' 27 ? refined 24.6950 -39.4480 3.3030 0.0435 0.1220 0.0932 -0.0077 -0.0013 0.0441 2.7526 8.9211 7.3297 0.9268 1.2400 2.5552 -0.0140 -0.1731 0.1871 -0.1912 0.0388 0.0348 0.4502 0.0130 0.0300 'X-RAY DIFFRACTION' 28 ? refined 23.5390 -36.5780 0.1960 0.0576 0.1188 0.0941 -0.0352 0.0021 0.0162 4.9101 15.0263 1.5899 0.7187 -0.1875 0.6887 0.1316 -0.1182 -0.0135 -0.2715 0.3835 -0.0013 0.1378 -0.0845 0.0135 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 0 A 5 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 A 6 A 10 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 A 11 A 15 ? . . . . ? 'X-RAY DIFFRACTION' 4 4 A 16 A 20 ? . . . . ? 'X-RAY DIFFRACTION' 5 5 A 21 A 26 ? . . . . ? 'X-RAY DIFFRACTION' 6 6 A 27 A 31 ? . . . . ? 'X-RAY DIFFRACTION' 7 7 A 32 A 38 ? . . . . ? 'X-RAY DIFFRACTION' 8 8 A 39 A 44 ? . . . . ? 'X-RAY DIFFRACTION' 9 9 A 45 A 50 ? . . . . ? 'X-RAY DIFFRACTION' 10 10 A 51 A 54 ? . . . . ? 'X-RAY DIFFRACTION' 11 11 A 55 A 61 ? . . . . ? 'X-RAY DIFFRACTION' 12 12 A 62 A 67 ? . . . . ? 'X-RAY DIFFRACTION' 13 13 A 68 A 73 ? . . . . ? 'X-RAY DIFFRACTION' 14 14 A 74 A 80 ? . . . . ? 'X-RAY DIFFRACTION' 15 15 B 0 B 5 ? . . . . ? 'X-RAY DIFFRACTION' 16 16 B 6 B 10 ? . . . . ? 'X-RAY DIFFRACTION' 17 17 B 11 B 15 ? . . . . ? 'X-RAY DIFFRACTION' 18 18 B 16 B 20 ? . . . . ? 'X-RAY DIFFRACTION' 19 19 B 21 B 26 ? . . . . ? 'X-RAY DIFFRACTION' 20 20 B 27 B 31 ? . . . . ? 'X-RAY DIFFRACTION' 21 21 B 32 B 39 ? . . . . ? 'X-RAY DIFFRACTION' 22 22 B 40 B 44 ? . . . . ? 'X-RAY DIFFRACTION' 23 23 B 45 B 50 ? . . . . ? 'X-RAY DIFFRACTION' 24 24 B 51 B 54 ? . . . . ? 'X-RAY DIFFRACTION' 25 25 B 55 B 59 ? . . . . ? 'X-RAY DIFFRACTION' 26 26 B 60 B 65 ? . . . . ? 'X-RAY DIFFRACTION' 27 27 B 66 B 71 ? . . . . ? 'X-RAY DIFFRACTION' 28 28 B 72 B 80 ? . . . . ? # _phasing.method MR # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HOH O O N N 123 HOH H1 H N N 124 HOH H2 H N N 125 ILE N N N N 126 ILE CA C N S 127 ILE C C N N 128 ILE O O N N 129 ILE CB C N S 130 ILE CG1 C N N 131 ILE CG2 C N N 132 ILE CD1 C N N 133 ILE OXT O N N 134 ILE H H N N 135 ILE H2 H N N 136 ILE HA H N N 137 ILE HB H N N 138 ILE HG12 H N N 139 ILE HG13 H N N 140 ILE HG21 H N N 141 ILE HG22 H N N 142 ILE HG23 H N N 143 ILE HD11 H N N 144 ILE HD12 H N N 145 ILE HD13 H N N 146 ILE HXT H N N 147 LEU N N N N 148 LEU CA C N S 149 LEU C C N N 150 LEU O O N N 151 LEU CB C N N 152 LEU CG C N N 153 LEU CD1 C N N 154 LEU CD2 C N N 155 LEU OXT O N N 156 LEU H H N N 157 LEU H2 H N N 158 LEU HA H N N 159 LEU HB2 H N N 160 LEU HB3 H N N 161 LEU HG H N N 162 LEU HD11 H N N 163 LEU HD12 H N N 164 LEU HD13 H N N 165 LEU HD21 H N N 166 LEU HD22 H N N 167 LEU HD23 H N N 168 LEU HXT H N N 169 LYS N N N N 170 LYS CA C N S 171 LYS C C N N 172 LYS O O N N 173 LYS CB C N N 174 LYS CG C N N 175 LYS CD C N N 176 LYS CE C N N 177 LYS NZ N N N 178 LYS OXT O N N 179 LYS H H N N 180 LYS H2 H N N 181 LYS HA H N N 182 LYS HB2 H N N 183 LYS HB3 H N N 184 LYS HG2 H N N 185 LYS HG3 H N N 186 LYS HD2 H N N 187 LYS HD3 H N N 188 LYS HE2 H N N 189 LYS HE3 H N N 190 LYS HZ1 H N N 191 LYS HZ2 H N N 192 LYS HZ3 H N N 193 LYS HXT H N N 194 MET N N N N 195 MET CA C N S 196 MET C C N N 197 MET O O N N 198 MET CB C N N 199 MET CG C N N 200 MET SD S N N 201 MET CE C N N 202 MET OXT O N N 203 MET H H N N 204 MET H2 H N N 205 MET HA H N N 206 MET HB2 H N N 207 MET HB3 H N N 208 MET HG2 H N N 209 MET HG3 H N N 210 MET HE1 H N N 211 MET HE2 H N N 212 MET HE3 H N N 213 MET HXT H N N 214 PHE N N N N 215 PHE CA C N S 216 PHE C C N N 217 PHE O O N N 218 PHE CB C N N 219 PHE CG C Y N 220 PHE CD1 C Y N 221 PHE CD2 C Y N 222 PHE CE1 C Y N 223 PHE CE2 C Y N 224 PHE CZ C Y N 225 PHE OXT O N N 226 PHE H H N N 227 PHE H2 H N N 228 PHE HA H N N 229 PHE HB2 H N N 230 PHE HB3 H N N 231 PHE HD1 H N N 232 PHE HD2 H N N 233 PHE HE1 H N N 234 PHE HE2 H N N 235 PHE HZ H N N 236 PHE HXT H N N 237 PRO N N N N 238 PRO CA C N S 239 PRO C C N N 240 PRO O O N N 241 PRO CB C N N 242 PRO CG C N N 243 PRO CD C N N 244 PRO OXT O N N 245 PRO H H N N 246 PRO HA H N N 247 PRO HB2 H N N 248 PRO HB3 H N N 249 PRO HG2 H N N 250 PRO HG3 H N N 251 PRO HD2 H N N 252 PRO HD3 H N N 253 PRO HXT H N N 254 SER N N N N 255 SER CA C N S 256 SER C C N N 257 SER O O N N 258 SER CB C N N 259 SER OG O N N 260 SER OXT O N N 261 SER H H N N 262 SER H2 H N N 263 SER HA H N N 264 SER HB2 H N N 265 SER HB3 H N N 266 SER HG H N N 267 SER HXT H N N 268 THR N N N N 269 THR CA C N S 270 THR C C N N 271 THR O O N N 272 THR CB C N R 273 THR OG1 O N N 274 THR CG2 C N N 275 THR OXT O N N 276 THR H H N N 277 THR H2 H N N 278 THR HA H N N 279 THR HB H N N 280 THR HG1 H N N 281 THR HG21 H N N 282 THR HG22 H N N 283 THR HG23 H N N 284 THR HXT H N N 285 TYR N N N N 286 TYR CA C N S 287 TYR C C N N 288 TYR O O N N 289 TYR CB C N N 290 TYR CG C Y N 291 TYR CD1 C Y N 292 TYR CD2 C Y N 293 TYR CE1 C Y N 294 TYR CE2 C Y N 295 TYR CZ C Y N 296 TYR OH O N N 297 TYR OXT O N N 298 TYR H H N N 299 TYR H2 H N N 300 TYR HA H N N 301 TYR HB2 H N N 302 TYR HB3 H N N 303 TYR HD1 H N N 304 TYR HD2 H N N 305 TYR HE1 H N N 306 TYR HE2 H N N 307 TYR HH H N N 308 TYR HXT H N N 309 VAL N N N N 310 VAL CA C N S 311 VAL C C N N 312 VAL O O N N 313 VAL CB C N N 314 VAL CG1 C N N 315 VAL CG2 C N N 316 VAL OXT O N N 317 VAL H H N N 318 VAL H2 H N N 319 VAL HA H N N 320 VAL HB H N N 321 VAL HG11 H N N 322 VAL HG12 H N N 323 VAL HG13 H N N 324 VAL HG21 H N N 325 VAL HG22 H N N 326 VAL HG23 H N N 327 VAL HXT H N N 328 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 ILE N CA sing N N 118 ILE N H sing N N 119 ILE N H2 sing N N 120 ILE CA C sing N N 121 ILE CA CB sing N N 122 ILE CA HA sing N N 123 ILE C O doub N N 124 ILE C OXT sing N N 125 ILE CB CG1 sing N N 126 ILE CB CG2 sing N N 127 ILE CB HB sing N N 128 ILE CG1 CD1 sing N N 129 ILE CG1 HG12 sing N N 130 ILE CG1 HG13 sing N N 131 ILE CG2 HG21 sing N N 132 ILE CG2 HG22 sing N N 133 ILE CG2 HG23 sing N N 134 ILE CD1 HD11 sing N N 135 ILE CD1 HD12 sing N N 136 ILE CD1 HD13 sing N N 137 ILE OXT HXT sing N N 138 LEU N CA sing N N 139 LEU N H sing N N 140 LEU N H2 sing N N 141 LEU CA C sing N N 142 LEU CA CB sing N N 143 LEU CA HA sing N N 144 LEU C O doub N N 145 LEU C OXT sing N N 146 LEU CB CG sing N N 147 LEU CB HB2 sing N N 148 LEU CB HB3 sing N N 149 LEU CG CD1 sing N N 150 LEU CG CD2 sing N N 151 LEU CG HG sing N N 152 LEU CD1 HD11 sing N N 153 LEU CD1 HD12 sing N N 154 LEU CD1 HD13 sing N N 155 LEU CD2 HD21 sing N N 156 LEU CD2 HD22 sing N N 157 LEU CD2 HD23 sing N N 158 LEU OXT HXT sing N N 159 LYS N CA sing N N 160 LYS N H sing N N 161 LYS N H2 sing N N 162 LYS CA C sing N N 163 LYS CA CB sing N N 164 LYS CA HA sing N N 165 LYS C O doub N N 166 LYS C OXT sing N N 167 LYS CB CG sing N N 168 LYS CB HB2 sing N N 169 LYS CB HB3 sing N N 170 LYS CG CD sing N N 171 LYS CG HG2 sing N N 172 LYS CG HG3 sing N N 173 LYS CD CE sing N N 174 LYS CD HD2 sing N N 175 LYS CD HD3 sing N N 176 LYS CE NZ sing N N 177 LYS CE HE2 sing N N 178 LYS CE HE3 sing N N 179 LYS NZ HZ1 sing N N 180 LYS NZ HZ2 sing N N 181 LYS NZ HZ3 sing N N 182 LYS OXT HXT sing N N 183 MET N CA sing N N 184 MET N H sing N N 185 MET N H2 sing N N 186 MET CA C sing N N 187 MET CA CB sing N N 188 MET CA HA sing N N 189 MET C O doub N N 190 MET C OXT sing N N 191 MET CB CG sing N N 192 MET CB HB2 sing N N 193 MET CB HB3 sing N N 194 MET CG SD sing N N 195 MET CG HG2 sing N N 196 MET CG HG3 sing N N 197 MET SD CE sing N N 198 MET CE HE1 sing N N 199 MET CE HE2 sing N N 200 MET CE HE3 sing N N 201 MET OXT HXT sing N N 202 PHE N CA sing N N 203 PHE N H sing N N 204 PHE N H2 sing N N 205 PHE CA C sing N N 206 PHE CA CB sing N N 207 PHE CA HA sing N N 208 PHE C O doub N N 209 PHE C OXT sing N N 210 PHE CB CG sing N N 211 PHE CB HB2 sing N N 212 PHE CB HB3 sing N N 213 PHE CG CD1 doub Y N 214 PHE CG CD2 sing Y N 215 PHE CD1 CE1 sing Y N 216 PHE CD1 HD1 sing N N 217 PHE CD2 CE2 doub Y N 218 PHE CD2 HD2 sing N N 219 PHE CE1 CZ doub Y N 220 PHE CE1 HE1 sing N N 221 PHE CE2 CZ sing Y N 222 PHE CE2 HE2 sing N N 223 PHE CZ HZ sing N N 224 PHE OXT HXT sing N N 225 PRO N CA sing N N 226 PRO N CD sing N N 227 PRO N H sing N N 228 PRO CA C sing N N 229 PRO CA CB sing N N 230 PRO CA HA sing N N 231 PRO C O doub N N 232 PRO C OXT sing N N 233 PRO CB CG sing N N 234 PRO CB HB2 sing N N 235 PRO CB HB3 sing N N 236 PRO CG CD sing N N 237 PRO CG HG2 sing N N 238 PRO CG HG3 sing N N 239 PRO CD HD2 sing N N 240 PRO CD HD3 sing N N 241 PRO OXT HXT sing N N 242 SER N CA sing N N 243 SER N H sing N N 244 SER N H2 sing N N 245 SER CA C sing N N 246 SER CA CB sing N N 247 SER CA HA sing N N 248 SER C O doub N N 249 SER C OXT sing N N 250 SER CB OG sing N N 251 SER CB HB2 sing N N 252 SER CB HB3 sing N N 253 SER OG HG sing N N 254 SER OXT HXT sing N N 255 THR N CA sing N N 256 THR N H sing N N 257 THR N H2 sing N N 258 THR CA C sing N N 259 THR CA CB sing N N 260 THR CA HA sing N N 261 THR C O doub N N 262 THR C OXT sing N N 263 THR CB OG1 sing N N 264 THR CB CG2 sing N N 265 THR CB HB sing N N 266 THR OG1 HG1 sing N N 267 THR CG2 HG21 sing N N 268 THR CG2 HG22 sing N N 269 THR CG2 HG23 sing N N 270 THR OXT HXT sing N N 271 TYR N CA sing N N 272 TYR N H sing N N 273 TYR N H2 sing N N 274 TYR CA C sing N N 275 TYR CA CB sing N N 276 TYR CA HA sing N N 277 TYR C O doub N N 278 TYR C OXT sing N N 279 TYR CB CG sing N N 280 TYR CB HB2 sing N N 281 TYR CB HB3 sing N N 282 TYR CG CD1 doub Y N 283 TYR CG CD2 sing Y N 284 TYR CD1 CE1 sing Y N 285 TYR CD1 HD1 sing N N 286 TYR CD2 CE2 doub Y N 287 TYR CD2 HD2 sing N N 288 TYR CE1 CZ doub Y N 289 TYR CE1 HE1 sing N N 290 TYR CE2 CZ sing Y N 291 TYR CE2 HE2 sing N N 292 TYR CZ OH sing N N 293 TYR OH HH sing N N 294 TYR OXT HXT sing N N 295 VAL N CA sing N N 296 VAL N H sing N N 297 VAL N H2 sing N N 298 VAL CA C sing N N 299 VAL CA CB sing N N 300 VAL CA HA sing N N 301 VAL C O doub N N 302 VAL C OXT sing N N 303 VAL CB CG1 sing N N 304 VAL CB CG2 sing N N 305 VAL CB HB sing N N 306 VAL CG1 HG11 sing N N 307 VAL CG1 HG12 sing N N 308 VAL CG1 HG13 sing N N 309 VAL CG2 HG21 sing N N 310 VAL CG2 HG22 sing N N 311 VAL CG2 HG23 sing N N 312 VAL OXT HXT sing N N 313 # _atom_sites.entry_id 4JTM _atom_sites.fract_transf_matrix[1][1] 0.008814 _atom_sites.fract_transf_matrix[1][2] 0.005089 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010177 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.040900 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_