HEADER CHAPERONE/ANTIBIOTIC 27-MAR-13 4JWC TITLE CRYSTAL STRUCTURE OF THE SUBSTRATE BINDING DOMAIN OF E.COLI DNAK IN TITLE 2 COMPLEX WITH BOVINE BAC7(1-16) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHAPERONE PROTEIN DNAK; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNO RESIDUES 389-607; COMPND 5 SYNONYM: HSP70, HEAT SHOCK 70 KDA PROTEIN, HEAT SHOCK PROTEIN 70; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: CATHELICIDIN-3; COMPND 9 CHAIN: C, D; COMPND 10 FRAGMENT: UNP RESIDUES 131-146; COMPND 11 SYNONYM: BACTENECIN-7, BAC7, PR-59; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: DNAK, GROP, GRPF, SEG; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 11 ORGANISM_COMMON: COW; SOURCE 12 ORGANISM_TAXID: 9913 KEYWDS CHAPERONE, PEPTIDE BINDING, ANTIMICROBIAL PEPTIDE, PEPTIDE BINDING KEYWDS 2 PROTEIN, CHAPERONE-PROTEIN BINDING COMPLEX, CHAPERONE-ANTIBIOTIC KEYWDS 3 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.ZAHN,N.STRAETER REVDAT 4 20-SEP-23 4JWC 1 REMARK REVDAT 3 15-NOV-17 4JWC 1 REMARK REVDAT 2 26-MAR-14 4JWC 1 JRNL REVDAT 1 13-NOV-13 4JWC 0 JRNL AUTH M.ZAHN,B.KIESLICH,N.BERTHOLD,D.KNAPPE,R.HOFFMANN,N.STRATER JRNL TITL STRUCTURAL IDENTIFICATION OF DNAK BINDING SITES WITHIN JRNL TITL 2 BOVINE AND SHEEP BACTENECIN BAC7. JRNL REF PROTEIN PEPT.LETT. V. 21 407 2014 JRNL REFN ISSN 0929-8665 JRNL PMID 24164259 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.67 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 53476 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.060 REMARK 3 FREE R VALUE TEST SET COUNT : 1101 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.85 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 3801 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2060 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3727 REMARK 3 BIN R VALUE (WORKING SET) : 0.2061 REMARK 3 BIN FREE R VALUE : 0.2050 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 1.95 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 74 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3386 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 372 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.81800 REMARK 3 B22 (A**2) : -3.30790 REMARK 3 B33 (A**2) : -0.51010 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.260 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3506 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4746 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1318 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 118 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 502 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3506 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 488 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4298 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.11 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.78 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 18.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|389 - A|506 } REMARK 3 ORIGIN FOR THE GROUP (A): -32.9689 37.9138 -21.6031 REMARK 3 T TENSOR REMARK 3 T11: -0.1120 T22: -0.0217 REMARK 3 T33: 0.0625 T12: 0.0018 REMARK 3 T13: 0.0027 T23: -0.0315 REMARK 3 L TENSOR REMARK 3 L11: 1.6336 L22: 0.6790 REMARK 3 L33: 0.0441 L12: -0.3469 REMARK 3 L13: -0.1480 L23: 0.1429 REMARK 3 S TENSOR REMARK 3 S11: -0.1078 S12: -0.0021 S13: 0.1450 REMARK 3 S21: 0.0203 S22: 0.0653 S23: 0.0224 REMARK 3 S31: 0.0023 S32: -0.0649 S33: 0.0425 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|507 - A|542 } REMARK 3 ORIGIN FOR THE GROUP (A): -30.1385 20.9711 -19.2964 REMARK 3 T TENSOR REMARK 3 T11: -0.1701 T22: -0.1191 REMARK 3 T33: 0.2115 T12: -0.0511 REMARK 3 T13: -0.0360 T23: 0.0319 REMARK 3 L TENSOR REMARK 3 L11: 3.8245 L22: 3.4745 REMARK 3 L33: 3.5827 L12: 2.3289 REMARK 3 L13: -2.6320 L23: -2.9104 REMARK 3 S TENSOR REMARK 3 S11: -0.0377 S12: 0.3423 S13: -0.0888 REMARK 3 S21: -0.2469 S22: 0.4568 S23: 0.5385 REMARK 3 S31: 0.3718 S32: -0.3405 S33: -0.4191 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { A|543 - A|601 } REMARK 3 ORIGIN FOR THE GROUP (A): -54.9992 18.9319 -3.3084 REMARK 3 T TENSOR REMARK 3 T11: -0.3040 T22: -0.1384 REMARK 3 T33: 0.3040 T12: -0.0367 REMARK 3 T13: 0.1218 T23: 0.1238 REMARK 3 L TENSOR REMARK 3 L11: 4.6895 L22: 1.3870 REMARK 3 L33: 3.3588 L12: -2.9104 REMARK 3 L13: -1.3732 L23: 0.4220 REMARK 3 S TENSOR REMARK 3 S11: -0.0071 S12: -0.2612 S13: 0.2748 REMARK 3 S21: 0.1022 S22: 0.3790 S23: 0.4799 REMARK 3 S31: -0.1348 S32: -0.5354 S33: -0.3719 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { B|389 - B|494 } REMARK 3 ORIGIN FOR THE GROUP (A): -11.5724 18.1745 -5.3789 REMARK 3 T TENSOR REMARK 3 T11: -0.0882 T22: -0.0557 REMARK 3 T33: 0.0820 T12: -0.0183 REMARK 3 T13: 0.0000 T23: 0.0018 REMARK 3 L TENSOR REMARK 3 L11: 0.8935 L22: 1.6216 REMARK 3 L33: 0.7482 L12: -0.2069 REMARK 3 L13: -0.1563 L23: 0.5414 REMARK 3 S TENSOR REMARK 3 S11: 0.0206 S12: -0.0889 S13: -0.1044 REMARK 3 S21: -0.0469 S22: 0.0197 S23: -0.1481 REMARK 3 S31: 0.0452 S32: 0.0983 S33: -0.0404 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: { B|495 - B|539 } REMARK 3 ORIGIN FOR THE GROUP (A): -23.0965 18.8096 -4.3989 REMARK 3 T TENSOR REMARK 3 T11: -0.1578 T22: -0.1089 REMARK 3 T33: -0.0253 T12: -0.0294 REMARK 3 T13: -0.0313 T23: 0.0283 REMARK 3 L TENSOR REMARK 3 L11: 3.7330 L22: 3.8779 REMARK 3 L33: 1.0146 L12: -0.4429 REMARK 3 L13: -0.1914 L23: 0.7883 REMARK 3 S TENSOR REMARK 3 S11: -0.0489 S12: -0.2008 S13: -0.2624 REMARK 3 S21: 0.0957 S22: -0.0576 S23: 0.5280 REMARK 3 S31: 0.0736 S32: -0.1859 S33: 0.1065 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: { B|540 - B|599 } REMARK 3 ORIGIN FOR THE GROUP (A): -20.6219 -8.5714 -20.5052 REMARK 3 T TENSOR REMARK 3 T11: -0.2149 T22: 0.0154 REMARK 3 T33: 0.2242 T12: -0.1520 REMARK 3 T13: 0.0118 T23: -0.1520 REMARK 3 L TENSOR REMARK 3 L11: 0.1898 L22: 0.2979 REMARK 3 L33: 6.6447 L12: -1.5150 REMARK 3 L13: -2.9104 L23: 1.5538 REMARK 3 S TENSOR REMARK 3 S11: 0.0362 S12: 0.5352 S13: -0.1334 REMARK 3 S21: -0.1345 S22: -0.0383 S23: -0.0470 REMARK 3 S31: 0.0774 S32: 0.1422 S33: 0.0022 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4JWC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-MAR-13. REMARK 100 THE DEPOSITION ID IS D_1000078586. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUL-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53610 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 24.680 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.43100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 3DPO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.4 M AMMONIUM SULFATE, 0.1 M CITRIC REMARK 280 ACID, PH 4.4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 38.82350 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 81.52100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.82350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 81.52100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -53.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 44.77000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 SD MET B 469 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 602 REMARK 465 GLN A 603 REMARK 465 GLN A 604 REMARK 465 GLN A 605 REMARK 465 HIS A 606 REMARK 465 ALA A 607 REMARK 465 GLU B 600 REMARK 465 ILE B 601 REMARK 465 ALA B 602 REMARK 465 GLN B 603 REMARK 465 GLN B 604 REMARK 465 GLN B 605 REMARK 465 HIS B 606 REMARK 465 ALA B 607 REMARK 465 ARG C 1 REMARK 465 ARG C 2 REMARK 465 ILE C 3 REMARK 465 ARG C 4 REMARK 465 PRO C 5 REMARK 465 PRO C 15 REMARK 465 ARG C 16 REMARK 465 ARG D 1 REMARK 465 ARG D 2 REMARK 465 ILE D 3 REMARK 465 ARG D 4 REMARK 465 PRO D 5 REMARK 465 ARG D 16 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 404 124.79 -36.02 REMARK 500 MET B 404 123.93 -38.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN C OF CATHELICIDIN-3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN D OF CATHELICIDIN-3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1DKX RELATED DB: PDB REMARK 900 RELATED ID: 1DKY RELATED DB: PDB REMARK 900 RELATED ID: 1DKZ RELATED DB: PDB REMARK 900 RELATED ID: 3DPO RELATED DB: PDB REMARK 900 RELATED ID: 3DPP RELATED DB: PDB REMARK 900 RELATED ID: 3DPQ RELATED DB: PDB REMARK 900 RELATED ID: 3QNJ RELATED DB: PDB REMARK 900 RELATED ID: 4E81 RELATED DB: PDB REMARK 900 RELATED ID: 4JWD RELATED DB: PDB REMARK 900 RELATED ID: 4JWE RELATED DB: PDB REMARK 900 RELATED ID: 4JWI RELATED DB: PDB DBREF 4JWC A 389 607 UNP P0A6Y8 DNAK_ECOLI 389 607 DBREF 4JWC B 389 607 UNP P0A6Y8 DNAK_ECOLI 389 607 DBREF 4JWC C 1 16 UNP P19661 CTHL3_BOVIN 131 146 DBREF 4JWC D 1 16 UNP P19661 CTHL3_BOVIN 131 146 SEQRES 1 A 219 VAL LEU LEU LEU ASP VAL THR PRO LEU SER LEU GLY ILE SEQRES 2 A 219 GLU THR MET GLY GLY VAL MET THR THR LEU ILE ALA LYS SEQRES 3 A 219 ASN THR THR ILE PRO THR LYS HIS SER GLN VAL PHE SER SEQRES 4 A 219 THR ALA GLU ASP ASN GLN SER ALA VAL THR ILE HIS VAL SEQRES 5 A 219 LEU GLN GLY GLU ARG LYS ARG ALA ALA ASP ASN LYS SER SEQRES 6 A 219 LEU GLY GLN PHE ASN LEU ASP GLY ILE ASN PRO ALA PRO SEQRES 7 A 219 ARG GLY MET PRO GLN ILE GLU VAL THR PHE ASP ILE ASP SEQRES 8 A 219 ALA ASP GLY ILE LEU HIS VAL SER ALA LYS ASP LYS ASN SEQRES 9 A 219 SER GLY LYS GLU GLN LYS ILE THR ILE LYS ALA SER SER SEQRES 10 A 219 GLY LEU ASN GLU ASP GLU ILE GLN LYS MET VAL ARG ASP SEQRES 11 A 219 ALA GLU ALA ASN ALA GLU ALA ASP ARG LYS PHE GLU GLU SEQRES 12 A 219 LEU VAL GLN THR ARG ASN GLN GLY ASP HIS LEU LEU HIS SEQRES 13 A 219 SER THR ARG LYS GLN VAL GLU GLU ALA GLY ASP LYS LEU SEQRES 14 A 219 PRO ALA ASP ASP LYS THR ALA ILE GLU SER ALA LEU THR SEQRES 15 A 219 ALA LEU GLU THR ALA LEU LYS GLY GLU ASP LYS ALA ALA SEQRES 16 A 219 ILE GLU ALA LYS MET GLN GLU LEU ALA GLN VAL SER GLN SEQRES 17 A 219 LYS LEU MET GLU ILE ALA GLN GLN GLN HIS ALA SEQRES 1 B 219 VAL LEU LEU LEU ASP VAL THR PRO LEU SER LEU GLY ILE SEQRES 2 B 219 GLU THR MET GLY GLY VAL MET THR THR LEU ILE ALA LYS SEQRES 3 B 219 ASN THR THR ILE PRO THR LYS HIS SER GLN VAL PHE SER SEQRES 4 B 219 THR ALA GLU ASP ASN GLN SER ALA VAL THR ILE HIS VAL SEQRES 5 B 219 LEU GLN GLY GLU ARG LYS ARG ALA ALA ASP ASN LYS SER SEQRES 6 B 219 LEU GLY GLN PHE ASN LEU ASP GLY ILE ASN PRO ALA PRO SEQRES 7 B 219 ARG GLY MET PRO GLN ILE GLU VAL THR PHE ASP ILE ASP SEQRES 8 B 219 ALA ASP GLY ILE LEU HIS VAL SER ALA LYS ASP LYS ASN SEQRES 9 B 219 SER GLY LYS GLU GLN LYS ILE THR ILE LYS ALA SER SER SEQRES 10 B 219 GLY LEU ASN GLU ASP GLU ILE GLN LYS MET VAL ARG ASP SEQRES 11 B 219 ALA GLU ALA ASN ALA GLU ALA ASP ARG LYS PHE GLU GLU SEQRES 12 B 219 LEU VAL GLN THR ARG ASN GLN GLY ASP HIS LEU LEU HIS SEQRES 13 B 219 SER THR ARG LYS GLN VAL GLU GLU ALA GLY ASP LYS LEU SEQRES 14 B 219 PRO ALA ASP ASP LYS THR ALA ILE GLU SER ALA LEU THR SEQRES 15 B 219 ALA LEU GLU THR ALA LEU LYS GLY GLU ASP LYS ALA ALA SEQRES 16 B 219 ILE GLU ALA LYS MET GLN GLU LEU ALA GLN VAL SER GLN SEQRES 17 B 219 LYS LEU MET GLU ILE ALA GLN GLN GLN HIS ALA SEQRES 1 C 16 ARG ARG ILE ARG PRO ARG PRO PRO ARG LEU PRO ARG PRO SEQRES 2 C 16 ARG PRO ARG SEQRES 1 D 16 ARG ARG ILE ARG PRO ARG PRO PRO ARG LEU PRO ARG PRO SEQRES 2 D 16 ARG PRO ARG HET SO4 A 701 5 HET SO4 B 701 5 HET SO4 B 702 5 HETNAM SO4 SULFATE ION FORMUL 5 SO4 3(O4 S 2-) FORMUL 8 HOH *372(H2 O) HELIX 1 1 ARG A 447 ASN A 451 5 5 HELIX 2 2 ASN A 508 ASN A 522 1 15 HELIX 3 3 ASN A 522 GLY A 554 1 33 HELIX 4 4 ASP A 555 LEU A 557 5 3 HELIX 5 5 PRO A 558 LYS A 577 1 20 HELIX 6 6 ASP A 580 GLN A 593 1 14 HELIX 7 7 SER A 595 ILE A 601 1 7 HELIX 8 8 ARG B 447 ASN B 451 5 5 HELIX 9 9 ASN B 508 ASN B 522 1 15 HELIX 10 10 ASN B 522 GLY B 554 1 33 HELIX 11 11 PRO B 558 LYS B 577 1 20 HELIX 12 12 ASP B 580 VAL B 594 1 15 SHEET 1 A 2 VAL A 394 THR A 395 0 SHEET 2 A 2 THR A 416 THR A 417 -1 O THR A 416 N THR A 395 SHEET 1 B 4 VAL A 407 ILE A 412 0 SHEET 2 B 4 LEU A 399 THR A 403 -1 N ILE A 401 O THR A 409 SHEET 3 B 4 VAL A 436 GLN A 442 -1 O LEU A 441 N GLY A 400 SHEET 4 B 4 LYS A 452 LEU A 459 -1 O LYS A 452 N GLN A 442 SHEET 1 C 5 GLU A 496 ILE A 501 0 SHEET 2 C 5 LEU A 484 ASP A 490 -1 N LEU A 484 O ILE A 501 SHEET 3 C 5 ILE A 472 ILE A 478 -1 N ASP A 477 O HIS A 485 SHEET 4 C 5 THR A 420 THR A 428 -1 N PHE A 426 O ILE A 472 SHEET 5 C 5 ARG C 9 LEU C 10 1 O LEU C 10 N SER A 427 SHEET 1 D 4 VAL B 407 ILE B 412 0 SHEET 2 D 4 LEU B 399 THR B 403 -1 N THR B 403 O VAL B 407 SHEET 3 D 4 VAL B 436 GLN B 442 -1 O LEU B 441 N GLY B 400 SHEET 4 D 4 LYS B 452 LEU B 459 -1 O PHE B 457 N ILE B 438 SHEET 1 E 5 GLU B 496 ILE B 501 0 SHEET 2 E 5 LEU B 484 ASP B 490 -1 N LEU B 484 O ILE B 501 SHEET 3 E 5 ILE B 472 ILE B 478 -1 N ASP B 477 O HIS B 485 SHEET 4 E 5 THR B 420 THR B 428 -1 N HIS B 422 O PHE B 476 SHEET 5 E 5 ARG D 9 LEU D 10 1 O LEU D 10 N SER B 427 CISPEP 1 ILE A 418 PRO A 419 0 4.54 CISPEP 2 ILE B 418 PRO B 419 0 1.04 SITE 1 AC1 8 ASN A 451 LYS A 452 SER A 453 HOH A 828 SITE 2 AC1 8 HOH A 844 HOH A 894 HOH A 909 LYS B 452 SITE 1 AC2 4 LYS B 502 SER B 504 HOH B 804 HOH B 929 SITE 1 AC3 4 ARG B 447 ARG B 536 HOH B 930 HOH B 962 SITE 1 AC4 28 ILE A 401 GLU A 402 THR A 403 MET A 404 SITE 2 AC4 28 GLN A 424 VAL A 425 PHE A 426 SER A 427 SITE 3 AC4 28 THR A 428 ALA A 429 GLU A 430 GLN A 433 SITE 4 AC4 28 ALA A 435 VAL A 436 THR A 437 ILE A 438 SITE 5 AC4 28 ASN A 458 ARG A 467 GLY A 468 HIS A 541 SITE 6 AC4 28 HOH A 890 GLU B 509 HOH C 101 HOH C 102 SITE 7 AC4 28 HOH C 103 HOH C 104 HOH C 105 HOH C 107 SITE 1 AC5 27 ARG A 517 ASP A 518 ALA A 521 ILE B 401 SITE 2 AC5 27 GLU B 402 THR B 403 MET B 404 GLN B 424 SITE 3 AC5 27 VAL B 425 PHE B 426 SER B 427 THR B 428 SITE 4 AC5 27 ALA B 429 GLN B 433 SER B 434 ALA B 435 SITE 5 AC5 27 VAL B 436 THR B 437 ILE B 438 ASN B 458 SITE 6 AC5 27 ARG B 467 HIS B 541 HOH B 935 HOH B 936 SITE 7 AC5 27 HOH D 101 HOH D 102 HOH D 103 CRYST1 77.647 163.042 44.770 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012879 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006133 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022336 0.00000