HEADER HYDROLASE 03-APR-13 4K02 TITLE CRYSTAL STRUCTURE OF ATDHNAT1, A 1,4-DIHYDROXY-2-NAPHTHOYL-COA TITLE 2 THIOESTERASE FROM ARABIDOPSIS THALIANA COMPND MOL_ID: 1; COMPND 2 MOLECULE: 1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: F11A17.13, THIOESTERASE-LIKE PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS,THALE-CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: AT1G48320, F11A17.13; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLAMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS HOTDOG FOLD, THIOESTERASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR F.FURT,W.J.ALLEN,J.R.WIDHALM,P.MADZELAN,R.C.RIZZO,G.BASSET,M.A.WILSON REVDAT 5 20-SEP-23 4K02 1 SEQADV REVDAT 4 15-NOV-17 4K02 1 REMARK REVDAT 3 15-JAN-14 4K02 1 JRNL REVDAT 2 02-OCT-13 4K02 1 JRNL REVDAT 1 17-APR-13 4K02 0 JRNL AUTH F.FURT,W.J.ALLEN,J.R.WIDHALM,P.MADZELAN,R.C.RIZZO,G.BASSET, JRNL AUTH 2 M.A.WILSON JRNL TITL FUNCTIONAL CONVERGENCE OF STRUCTURALLY DISTINCT JRNL TITL 2 THIOESTERASES FROM CYANOBACTERIA AND PLANTS INVOLVED IN JRNL TITL 3 PHYLLOQUINONE BIOSYNTHESIS. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 69 1876 2013 JRNL REFN ISSN 0907-4449 JRNL PMID 24100308 JRNL DOI 10.1107/S0907444913015771 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.88 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 3 NUMBER OF REFLECTIONS : 26702 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1361 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1539 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 79.36 REMARK 3 BIN R VALUE (WORKING SET) : 0.3040 REMARK 3 BIN FREE R VALUE SET COUNT : 91 REMARK 3 BIN FREE R VALUE : 0.3420 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1914 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 52 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.20000 REMARK 3 B22 (A**2) : -1.20000 REMARK 3 B33 (A**2) : 3.88000 REMARK 3 B12 (A**2) : -1.20000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.121 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.115 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.097 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.182 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1961 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1963 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2659 ; 1.618 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4536 ; 0.842 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 254 ; 8.583 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 64 ;32.344 ;24.062 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 349 ;16.240 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;22.782 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 319 ; 0.108 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2154 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 406 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 10 136 B 10 136 7558 0.12 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 10 A 136 REMARK 3 ORIGIN FOR THE GROUP (A): 42.1536 -16.3626 81.1741 REMARK 3 T TENSOR REMARK 3 T11: 0.1375 T22: 0.0516 REMARK 3 T33: 0.2161 T12: 0.0604 REMARK 3 T13: -0.0247 T23: -0.0086 REMARK 3 L TENSOR REMARK 3 L11: 5.8290 L22: 4.6254 REMARK 3 L33: 2.0804 L12: 1.4483 REMARK 3 L13: -1.0709 L23: -0.8204 REMARK 3 S TENSOR REMARK 3 S11: 0.2706 S12: 0.1701 S13: -0.4932 REMARK 3 S21: -0.0714 S22: -0.0187 S23: -0.1690 REMARK 3 S31: 0.1327 S32: -0.1160 S33: -0.2519 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 10 B 136 REMARK 3 ORIGIN FOR THE GROUP (A): 39.6448 -5.6023 96.9636 REMARK 3 T TENSOR REMARK 3 T11: 0.3703 T22: 0.1993 REMARK 3 T33: 0.2109 T12: -0.1058 REMARK 3 T13: 0.1142 T23: -0.0134 REMARK 3 L TENSOR REMARK 3 L11: 4.2078 L22: 5.4786 REMARK 3 L33: 3.7129 L12: 0.0209 REMARK 3 L13: 0.6127 L23: -1.5309 REMARK 3 S TENSOR REMARK 3 S11: 0.4417 S12: -0.7610 S13: -0.0062 REMARK 3 S21: 0.7970 S22: -0.2036 S23: -0.1813 REMARK 3 S31: -0.2011 S32: -0.0582 S33: -0.2381 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4K02 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-APR-13. REMARK 100 THE DEPOSITION ID IS D_1000078720. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26984 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 28.880 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 200 DATA REDUNDANCY : 35.30 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 48.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.1 REMARK 200 DATA REDUNDANCY IN SHELL : 22.50 REMARK 200 R MERGE FOR SHELL (I) : 0.76400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1SC0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.7 M NAHCOOH, 100 MM TRIS-HCL, 10 MM REMARK 280 N-OCTYL- D-GLUCOSIDE IN PROTEIN, PH 7.0, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 20.41900 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 40.83800 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 40.83800 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 20.41900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7440 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 163.35200 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 SER A 3 REMARK 465 ALA A 4 REMARK 465 SER A 5 REMARK 465 SER A 6 REMARK 465 ASN A 7 REMARK 465 THR A 8 REMARK 465 LYS A 9 REMARK 465 LEU A 137 REMARK 465 PRO A 138 REMARK 465 ILE A 139 REMARK 465 PRO A 140 REMARK 465 ASP A 141 REMARK 465 ASN A 142 REMARK 465 ALA A 143 REMARK 465 LYS A 144 REMARK 465 ASP A 145 REMARK 465 ALA A 146 REMARK 465 ALA A 147 REMARK 465 ASN A 148 REMARK 465 MET A 149 REMARK 465 LEU A 150 REMARK 465 LYS A 151 REMARK 465 MET A 152 REMARK 465 VAL A 153 REMARK 465 ALA A 154 REMARK 465 LYS A 155 REMARK 465 LEU A 156 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 ASP B 2 REMARK 465 SER B 3 REMARK 465 ALA B 4 REMARK 465 SER B 5 REMARK 465 SER B 6 REMARK 465 ASN B 7 REMARK 465 THR B 8 REMARK 465 LYS B 9 REMARK 465 LEU B 137 REMARK 465 PRO B 138 REMARK 465 ILE B 139 REMARK 465 PRO B 140 REMARK 465 ASP B 141 REMARK 465 ASN B 142 REMARK 465 ALA B 143 REMARK 465 LYS B 144 REMARK 465 ASP B 145 REMARK 465 ALA B 146 REMARK 465 ALA B 147 REMARK 465 ASN B 148 REMARK 465 MET B 149 REMARK 465 LEU B 150 REMARK 465 LYS B 151 REMARK 465 MET B 152 REMARK 465 VAL B 153 REMARK 465 ALA B 154 REMARK 465 LYS B 155 REMARK 465 LEU B 156 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 57 O HOH B 205 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 205 O HOH B 212 5557 1.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 23 -74.26 -119.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLN A 42 PRO A 43 -146.72 REMARK 500 CYS B 135 ASN B 136 -142.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4K00 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF SLR0204, A 1,4-DIHYDROXY-2-NAPHTHOYL-COA REMARK 900 THIOESTERASE FROM SYNECHOCYSTIS DBREF 4K02 A 1 156 UNP Q9SX65 Q9SX65_ARATH 1 156 DBREF 4K02 B 1 156 UNP Q9SX65 Q9SX65_ARATH 1 156 SEQADV 4K02 GLY A -2 UNP Q9SX65 EXPRESSION TAG SEQADV 4K02 SER A -1 UNP Q9SX65 EXPRESSION TAG SEQADV 4K02 HIS A 0 UNP Q9SX65 EXPRESSION TAG SEQADV 4K02 GLY B -2 UNP Q9SX65 EXPRESSION TAG SEQADV 4K02 SER B -1 UNP Q9SX65 EXPRESSION TAG SEQADV 4K02 HIS B 0 UNP Q9SX65 EXPRESSION TAG SEQRES 1 A 159 GLY SER HIS MET ASP SER ALA SER SER ASN THR LYS ALA SEQRES 2 A 159 ILE ASP PRO PRO LEU HIS MET LEU GLY PHE GLU PHE ASP SEQRES 3 A 159 GLU LEU SER PRO THR ARG ILE THR GLY ARG LEU PRO VAL SEQRES 4 A 159 SER PRO VAL CYS CYS GLN PRO PHE LYS VAL LEU HIS GLY SEQRES 5 A 159 GLY VAL SER ALA LEU ILE ALA GLU SER LEU ALA SER MET SEQRES 6 A 159 GLY ALA HIS MET ALA SER GLY PHE LYS ARG VAL ALA GLY SEQRES 7 A 159 ILE GLN LEU SER ILE ASN HIS LEU LYS SER ALA ASP LEU SEQRES 8 A 159 GLY ASP LEU VAL PHE ALA GLU ALA THR PRO VAL SER THR SEQRES 9 A 159 GLY LYS THR ILE GLN VAL TRP GLU VAL LYS LEU TRP LYS SEQRES 10 A 159 THR THR GLN LYS ASP LYS ALA ASN LYS ILE LEU ILE SER SEQRES 11 A 159 SER SER ARG VAL THR LEU ILE CYS ASN LEU PRO ILE PRO SEQRES 12 A 159 ASP ASN ALA LYS ASP ALA ALA ASN MET LEU LYS MET VAL SEQRES 13 A 159 ALA LYS LEU SEQRES 1 B 159 GLY SER HIS MET ASP SER ALA SER SER ASN THR LYS ALA SEQRES 2 B 159 ILE ASP PRO PRO LEU HIS MET LEU GLY PHE GLU PHE ASP SEQRES 3 B 159 GLU LEU SER PRO THR ARG ILE THR GLY ARG LEU PRO VAL SEQRES 4 B 159 SER PRO VAL CYS CYS GLN PRO PHE LYS VAL LEU HIS GLY SEQRES 5 B 159 GLY VAL SER ALA LEU ILE ALA GLU SER LEU ALA SER MET SEQRES 6 B 159 GLY ALA HIS MET ALA SER GLY PHE LYS ARG VAL ALA GLY SEQRES 7 B 159 ILE GLN LEU SER ILE ASN HIS LEU LYS SER ALA ASP LEU SEQRES 8 B 159 GLY ASP LEU VAL PHE ALA GLU ALA THR PRO VAL SER THR SEQRES 9 B 159 GLY LYS THR ILE GLN VAL TRP GLU VAL LYS LEU TRP LYS SEQRES 10 B 159 THR THR GLN LYS ASP LYS ALA ASN LYS ILE LEU ILE SER SEQRES 11 B 159 SER SER ARG VAL THR LEU ILE CYS ASN LEU PRO ILE PRO SEQRES 12 B 159 ASP ASN ALA LYS ASP ALA ALA ASN MET LEU LYS MET VAL SEQRES 13 B 159 ALA LYS LEU FORMUL 3 HOH *52(H2 O) HELIX 1 1 ASP A 12 LEU A 18 1 7 HELIX 2 2 SER A 37 VAL A 39 5 3 HELIX 3 3 HIS A 48 SER A 68 1 21 HELIX 4 4 ASP B 12 GLY B 19 1 8 HELIX 5 5 SER B 37 VAL B 39 5 3 HELIX 6 6 HIS B 48 SER B 68 1 21 SHEET 1 A12 GLU A 21 SER A 26 0 SHEET 2 A12 ARG A 29 PRO A 35 -1 O THR A 31 N ASP A 23 SHEET 3 A12 LEU A 91 THR A 101 -1 O ALA A 94 N GLY A 32 SHEET 4 A12 ILE A 105 THR A 115 -1 O VAL A 107 N VAL A 99 SHEET 5 A12 ILE A 124 CYS A 135 -1 O LEU A 133 N GLN A 106 SHEET 6 A12 VAL A 73 HIS A 82 -1 N GLN A 77 O THR A 132 SHEET 7 A12 VAL B 73 HIS B 82 -1 O ILE B 80 N LEU A 78 SHEET 8 A12 ILE B 124 CYS B 135 -1 O SER B 128 N ASN B 81 SHEET 9 A12 ILE B 105 THR B 115 -1 N LYS B 114 O ILE B 124 SHEET 10 A12 LEU B 91 THR B 101 -1 N THR B 97 O GLU B 109 SHEET 11 A12 ARG B 29 PRO B 35 -1 N ILE B 30 O ALA B 96 SHEET 12 A12 GLU B 21 SER B 26 -1 N GLU B 21 O ARG B 33 SHEET 1 B 2 CYS A 41 GLN A 42 0 SHEET 2 B 2 VAL A 46 LEU A 47 -1 O VAL A 46 N GLN A 42 SHEET 1 C 2 CYS B 41 GLN B 42 0 SHEET 2 C 2 VAL B 46 LEU B 47 -1 O VAL B 46 N GLN B 42 CRYST1 99.529 99.529 61.257 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010047 0.005801 0.000000 0.00000 SCALE2 0.000000 0.011602 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016325 0.00000