HEADER OXIDOREDUCTASE 08-APR-13 4K28 TITLE 2.15 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF A SHIKIMATE TITLE 2 DEHYDROGENASE FAMILY PROTEIN FROM PSEUDOMONAS PUTIDA KT2440 IN TITLE 3 COMPLEX WITH NAD+ COMPND MOL_ID: 1; COMPND 2 MOLECULE: SHIKIMATE DEHYDROGENASE FAMILY PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA; SOURCE 3 ORGANISM_TAXID: 160488; SOURCE 4 STRAIN: KT2440; SOURCE 5 GENE: PP2608, PP_2608; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: P15TV-L KEYWDS ROSSMANN-FOLD NAD(P)(+)-BINDING SITE, OXIDOREDUCTASE, SHIKIMATE KEYWDS 2 DEHYDROGENASE, NAD+ BINDING, SHIKIMATE BINDING EXPDTA X-RAY DIFFRACTION AUTHOR C.GARCIA,J.PEEK,P.PETIT,D.CHRISTENDAT REVDAT 2 28-FEB-24 4K28 1 REMARK LINK REVDAT 1 17-APR-13 4K28 0 SPRSDE 17-APR-13 4K28 3TUM JRNL AUTH J.PEEK,C.GARCIA,J.LEE,D.CHRISTENDAT JRNL TITL INSIGHTS INTO THE FUNCTION OF RIFI2: STRUCTURAL AND JRNL TITL 2 BIOCHEMICAL INVESTIGATION OF A NEW SHIKIMATE DEHYDROGENASE JRNL TITL 3 FAMILY PROTEIN. JRNL REF BIOCHIM.BIOPHYS.ACTA V.1834 516 2013 JRNL REFN ISSN 0006-3002 JRNL PMID 23142411 JRNL DOI 10.1016/J.BBAPAP.2012.10.016 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_237) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.22 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.020 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 3 NUMBER OF REFLECTIONS : 27601 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 1399 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.2250 - 4.6128 0.99 2928 174 0.1486 0.1981 REMARK 3 2 4.6128 - 3.6697 0.99 2809 148 0.1439 0.1914 REMARK 3 3 3.6697 - 3.2082 0.99 2776 142 0.1612 0.2255 REMARK 3 4 3.2082 - 2.9160 0.97 2714 145 0.1867 0.2465 REMARK 3 5 2.9160 - 2.7076 0.95 2642 132 0.2054 0.2805 REMARK 3 6 2.7076 - 2.5484 0.94 2571 158 0.1983 0.2844 REMARK 3 7 2.5484 - 2.4210 0.92 2526 123 0.2076 0.2559 REMARK 3 8 2.4210 - 2.3158 0.90 2474 128 0.2093 0.2819 REMARK 3 9 2.3158 - 2.2268 0.88 2391 118 0.2123 0.2914 REMARK 3 10 2.2268 - 2.1500 0.87 2371 131 0.2112 0.2572 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 33.41 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.620 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.03200 REMARK 3 B22 (A**2) : -0.08630 REMARK 3 B33 (A**2) : 0.05430 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4081 REMARK 3 ANGLE : 1.272 5570 REMARK 3 CHIRALITY : 0.065 649 REMARK 3 PLANARITY : 0.013 732 REMARK 3 DIHEDRAL : 26.378 1546 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -13.9082 13.7382 -18.9135 REMARK 3 T TENSOR REMARK 3 T11: 0.0254 T22: 0.0317 REMARK 3 T33: 0.0461 T12: -0.0011 REMARK 3 T13: 0.0158 T23: 0.0195 REMARK 3 L TENSOR REMARK 3 L11: 0.1616 L22: 0.1489 REMARK 3 L33: 0.2722 L12: 0.1750 REMARK 3 L13: -0.0462 L23: -0.0406 REMARK 3 S TENSOR REMARK 3 S11: -0.0184 S12: 0.0274 S13: -0.0424 REMARK 3 S21: -0.0370 S22: 0.0546 S23: -0.0486 REMARK 3 S31: 0.0283 S32: -0.0640 S33: -0.0299 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4K28 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-APR-13. REMARK 100 THE DEPOSITION ID IS D_1000078798. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAY-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29145 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 19.220 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : 0.08300 REMARK 200 FOR THE DATA SET : 17.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.62600 REMARK 200 R SYM FOR SHELL (I) : 0.55900 REMARK 200 FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM CITRATE, 0.2M AMMONIUM REMARK 280 ACETATE, 20% PEG 8000 , PH 5.1, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.21850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.66650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.34400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 76.66650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.21850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.34400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -67.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 38.34400 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -76.66650 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ILE A 2 REMARK 465 ILE A 269 REMARK 465 MET B 1 REMARK 465 ILE B 2 REMARK 465 ILE B 269 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG B 202 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 255 -33.64 -31.46 REMARK 500 VAL A 264 -18.34 -140.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 305 DBREF 4K28 A 1 269 UNP Q88JP1 Q88JP1_PSEPK 1 269 DBREF 4K28 B 1 269 UNP Q88JP1 Q88JP1_PSEPK 1 269 SEQRES 1 A 269 MET ILE ARG GLY SER THR GLU LEU VAL ALA ILE VAL GLY SEQRES 2 A 269 SER PRO ILE ALA GLN VAL LYS SER PRO GLN ASN PHE ASN SEQRES 3 A 269 THR TRP PHE ASN HIS ASN ASN CYS ASN LEU ALA MET LEU SEQRES 4 A 269 PRO ILE ASP LEU HIS GLU ALA ALA LEU ASP SER PHE ALA SEQRES 5 A 269 ASP THR LEU ARG GLY TRP GLN ASN LEU ARG GLY CYS VAL SEQRES 6 A 269 VAL THR VAL PRO TYR LYS GLN ALA LEU ALA ASN ARG VAL SEQRES 7 A 269 ASP GLY LEU SER GLU ARG ALA ALA ALA LEU GLY SER ILE SEQRES 8 A 269 ASN VAL ILE ARG ARG GLU ARG ASP GLY ARG LEU LEU GLY SEQRES 9 A 269 ASP ASN VAL ASP GLY ALA GLY PHE LEU GLY ALA ALA HIS SEQRES 10 A 269 LYS HIS GLY PHE GLU PRO ALA GLY LYS ARG ALA LEU VAL SEQRES 11 A 269 ILE GLY CYS GLY GLY VAL GLY SER ALA ILE ALA TYR ALA SEQRES 12 A 269 LEU ALA GLU ALA GLY ILE ALA SER ILE THR LEU CYS ASP SEQRES 13 A 269 PRO SER THR ALA ARG MET GLY ALA VAL CYS GLU LEU LEU SEQRES 14 A 269 GLY ASN GLY PHE PRO GLY LEU THR VAL SER THR GLN PHE SEQRES 15 A 269 SER GLY LEU GLU ASP PHE ASP LEU VAL ALA ASN ALA SER SEQRES 16 A 269 PRO VAL GLY MET GLY THR ARG ALA GLU LEU PRO LEU SER SEQRES 17 A 269 ALA ALA LEU LEU ALA THR LEU GLN PRO ASP THR LEU VAL SEQRES 18 A 269 ALA ASP VAL VAL THR SER PRO GLU ILE THR PRO LEU LEU SEQRES 19 A 269 ASN ARG ALA ARG GLN VAL GLY CYS ARG ILE GLN THR GLY SEQRES 20 A 269 PRO GLU MET ALA PHE ALA GLN LEU GLY HIS LEU GLY ALA SEQRES 21 A 269 PHE MET GLY VAL THR PRO LEU GLU ILE SEQRES 1 B 269 MET ILE ARG GLY SER THR GLU LEU VAL ALA ILE VAL GLY SEQRES 2 B 269 SER PRO ILE ALA GLN VAL LYS SER PRO GLN ASN PHE ASN SEQRES 3 B 269 THR TRP PHE ASN HIS ASN ASN CYS ASN LEU ALA MET LEU SEQRES 4 B 269 PRO ILE ASP LEU HIS GLU ALA ALA LEU ASP SER PHE ALA SEQRES 5 B 269 ASP THR LEU ARG GLY TRP GLN ASN LEU ARG GLY CYS VAL SEQRES 6 B 269 VAL THR VAL PRO TYR LYS GLN ALA LEU ALA ASN ARG VAL SEQRES 7 B 269 ASP GLY LEU SER GLU ARG ALA ALA ALA LEU GLY SER ILE SEQRES 8 B 269 ASN VAL ILE ARG ARG GLU ARG ASP GLY ARG LEU LEU GLY SEQRES 9 B 269 ASP ASN VAL ASP GLY ALA GLY PHE LEU GLY ALA ALA HIS SEQRES 10 B 269 LYS HIS GLY PHE GLU PRO ALA GLY LYS ARG ALA LEU VAL SEQRES 11 B 269 ILE GLY CYS GLY GLY VAL GLY SER ALA ILE ALA TYR ALA SEQRES 12 B 269 LEU ALA GLU ALA GLY ILE ALA SER ILE THR LEU CYS ASP SEQRES 13 B 269 PRO SER THR ALA ARG MET GLY ALA VAL CYS GLU LEU LEU SEQRES 14 B 269 GLY ASN GLY PHE PRO GLY LEU THR VAL SER THR GLN PHE SEQRES 15 B 269 SER GLY LEU GLU ASP PHE ASP LEU VAL ALA ASN ALA SER SEQRES 16 B 269 PRO VAL GLY MET GLY THR ARG ALA GLU LEU PRO LEU SER SEQRES 17 B 269 ALA ALA LEU LEU ALA THR LEU GLN PRO ASP THR LEU VAL SEQRES 18 B 269 ALA ASP VAL VAL THR SER PRO GLU ILE THR PRO LEU LEU SEQRES 19 B 269 ASN ARG ALA ARG GLN VAL GLY CYS ARG ILE GLN THR GLY SEQRES 20 B 269 PRO GLU MET ALA PHE ALA GLN LEU GLY HIS LEU GLY ALA SEQRES 21 B 269 PHE MET GLY VAL THR PRO LEU GLU ILE HET NAD A 301 44 HET MN A 302 1 HET MN A 303 1 HET MN A 304 1 HET NAD B 301 44 HET NA B 302 1 HET MN B 303 1 HET MN B 304 1 HET MN B 305 1 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM MN MANGANESE (II) ION HETNAM NA SODIUM ION FORMUL 3 NAD 2(C21 H27 N7 O14 P2) FORMUL 4 MN 6(MN 2+) FORMUL 8 NA NA 1+ FORMUL 12 HOH *259(H2 O) HELIX 1 1 LYS A 20 ASN A 32 1 13 HELIX 2 2 HIS A 44 ALA A 46 5 3 HELIX 3 3 ALA A 47 TRP A 58 1 12 HELIX 4 4 TYR A 70 ASN A 76 1 7 HELIX 5 5 SER A 82 GLY A 89 1 8 HELIX 6 6 VAL A 107 HIS A 119 1 13 HELIX 7 7 GLY A 134 ALA A 147 1 14 HELIX 8 8 SER A 158 PHE A 173 1 16 HELIX 9 9 SER A 208 THR A 214 1 7 HELIX 10 10 THR A 231 VAL A 240 1 10 HELIX 11 11 THR A 246 MET A 262 1 17 HELIX 12 12 LYS B 20 ASN B 32 1 13 HELIX 13 13 HIS B 44 ALA B 46 5 3 HELIX 14 14 ALA B 47 TRP B 58 1 12 HELIX 15 15 TYR B 70 ASN B 76 1 7 HELIX 16 16 SER B 82 GLY B 89 1 8 HELIX 17 17 VAL B 107 HIS B 119 1 13 HELIX 18 18 GLY B 134 ALA B 147 1 14 HELIX 19 19 SER B 158 PHE B 173 1 16 HELIX 20 20 SER B 208 ALA B 213 1 6 HELIX 21 21 THR B 231 GLY B 241 1 11 HELIX 22 22 THR B 246 GLY B 263 1 18 SHEET 1 A 6 LEU A 36 ASP A 42 0 SHEET 2 A 6 GLU A 7 GLY A 13 1 N ILE A 11 O ILE A 41 SHEET 3 A 6 LEU A 61 VAL A 66 1 O ARG A 62 N LEU A 8 SHEET 4 A 6 VAL A 93 ARG A 96 -1 O ILE A 94 N CYS A 64 SHEET 5 A 6 LEU A 102 ASP A 105 -1 O LEU A 103 N ARG A 95 SHEET 6 A 6 GLY A 80 LEU A 81 1 N GLY A 80 O GLY A 104 SHEET 1 B 6 THR A 177 SER A 179 0 SHEET 2 B 6 SER A 151 CYS A 155 1 N ILE A 152 O THR A 177 SHEET 3 B 6 ARG A 127 ILE A 131 1 N VAL A 130 O THR A 153 SHEET 4 B 6 LEU A 190 ASN A 193 1 O ALA A 192 N ILE A 131 SHEET 5 B 6 LEU A 220 ASP A 223 1 O ALA A 222 N VAL A 191 SHEET 6 B 6 ARG A 243 GLN A 245 1 O ARG A 243 N VAL A 221 SHEET 1 C 6 LEU B 36 ASP B 42 0 SHEET 2 C 6 GLU B 7 GLY B 13 1 N ILE B 11 O ILE B 41 SHEET 3 C 6 LEU B 61 VAL B 66 1 O VAL B 65 N ALA B 10 SHEET 4 C 6 VAL B 93 ARG B 96 -1 O ARG B 96 N ARG B 62 SHEET 5 C 6 LEU B 102 ASP B 105 -1 O LEU B 103 N ARG B 95 SHEET 6 C 6 GLY B 80 LEU B 81 1 N GLY B 80 O GLY B 104 SHEET 1 D 6 THR B 177 SER B 179 0 SHEET 2 D 6 SER B 151 CYS B 155 1 N LEU B 154 O SER B 179 SHEET 3 D 6 ARG B 127 ILE B 131 1 N ALA B 128 O THR B 153 SHEET 4 D 6 LEU B 190 ASN B 193 1 O ALA B 192 N ILE B 131 SHEET 5 D 6 LEU B 220 ASP B 223 1 O ALA B 222 N VAL B 191 SHEET 6 D 6 ARG B 243 GLN B 245 1 O GLN B 245 N VAL B 221 LINK SG CYS A 34 MN MN A 304 1555 1555 2.43 LINK SG CYS A 155 MN MN A 302 1555 1555 2.56 LINK SG CYS A 166 MN MN A 303 1555 1555 2.21 LINK SG CYS B 34 MN MN B 303 1555 1555 2.36 LINK SG CYS B 155 MN MN B 304 1555 1555 2.27 LINK SG CYS B 166 MN MN B 305 1555 1555 2.51 CISPEP 1 SER A 14 PRO A 15 0 -3.21 CISPEP 2 VAL A 68 PRO A 69 0 0.86 CISPEP 3 SER A 227 PRO A 228 0 2.37 CISPEP 4 SER B 14 PRO B 15 0 2.46 CISPEP 5 VAL B 68 PRO B 69 0 4.59 CISPEP 6 SER B 227 PRO B 228 0 7.44 SITE 1 AC1 23 ILE A 131 GLY A 132 GLY A 134 GLY A 135 SITE 2 AC1 23 VAL A 136 CYS A 155 ASP A 156 PRO A 157 SITE 3 AC1 23 ARG A 161 ALA A 194 SER A 195 PRO A 196 SITE 4 AC1 23 MET A 199 VAL A 224 GLY A 247 MET A 250 SITE 5 AC1 23 ALA A 251 GLN A 254 HOH A 403 HOH A 501 SITE 6 AC1 23 HOH A 520 HOH A 531 HOH A 533 SITE 1 AC2 3 CYS A 155 PHE A 182 LEU A 207 SITE 1 AC3 2 CYS A 166 VAL A 178 SITE 1 AC4 1 CYS A 34 SITE 1 AC5 22 ILE B 131 GLY B 132 GLY B 134 GLY B 135 SITE 2 AC5 22 VAL B 136 CYS B 155 ASP B 156 PRO B 157 SITE 3 AC5 22 ARG B 161 ALA B 194 SER B 195 PRO B 196 SITE 4 AC5 22 MET B 199 VAL B 224 THR B 226 GLY B 247 SITE 5 AC5 22 ALA B 251 GLN B 254 HOH B 428 HOH B 445 SITE 6 AC5 22 HOH B 491 HOH B 511 SITE 1 AC6 4 VAL B 68 PRO B 69 TYR B 70 LYS B 71 SITE 1 AC7 1 CYS B 34 SITE 1 AC8 3 CYS B 155 PHE B 182 LEU B 207 SITE 1 AC9 2 CYS B 166 VAL B 178 CRYST1 44.437 76.688 153.333 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022504 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013040 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006522 0.00000