HEADER TRANSCRIPTION ACTIVATOR 09-APR-13 4K2E TITLE HLYU FROM VIBRIO CHOLERAE N16961 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTIONAL ACTIVATOR HLYU; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE; SOURCE 3 ORGANISM_TAXID: 243277; SOURCE 4 STRAIN: N16961; SOURCE 5 GENE: HLYU, VC_0678; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A(+) KEYWDS WINGED HELIX, DNA-BINDING DOMAIN, HEMOLYSIN GENE TRANSCRIPTION KEYWDS 2 REGULATOR, DNA, S-HYDROXYCYSTEINE, TRANSCRIPTION ACTIVATOR EXPDTA X-RAY DIFFRACTION AUTHOR D.MUKHERJEE,A.B.DATTA,P.CHAKRABARTI REVDAT 4 06-DEC-23 4K2E 1 REMARK REVDAT 3 08-NOV-23 4K2E 1 SEQADV LINK REVDAT 2 24-DEC-14 4K2E 1 JRNL REVDAT 1 30-APR-14 4K2E 0 JRNL AUTH D.MUKHERJEE,A.B.DATTA,P.CHAKRABARTI JRNL TITL CRYSTAL STRUCTURE OF HLYU, THE HEMOLYSIN GENE TRANSCRIPTION JRNL TITL 2 ACTIVATOR, FROM VIBRIO CHOLERAE N16961 AND FUNCTIONAL JRNL TITL 3 IMPLICATIONS. JRNL REF BIOCHIM.BIOPHYS.ACTA V.1844 2346 2014 JRNL REFN ISSN 0006-3002 JRNL PMID 25450504 JRNL DOI 10.1016/J.BBAPAP.2014.09.020 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.53 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 36213 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1816 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.5340 - 4.2272 0.94 2580 156 0.1707 0.2218 REMARK 3 2 4.2272 - 3.3574 0.97 2650 135 0.1529 0.2033 REMARK 3 3 3.3574 - 2.9336 0.99 2658 149 0.1901 0.2208 REMARK 3 4 2.9336 - 2.6656 0.99 2649 141 0.2069 0.2520 REMARK 3 5 2.6656 - 2.4747 0.99 2639 141 0.2128 0.2897 REMARK 3 6 2.4747 - 2.3289 0.99 2665 141 0.2038 0.2539 REMARK 3 7 2.3289 - 2.2123 0.99 2616 152 0.1944 0.2715 REMARK 3 8 2.2123 - 2.1161 1.00 2634 135 0.2029 0.2944 REMARK 3 9 2.1161 - 2.0347 1.00 2680 141 0.2150 0.2602 REMARK 3 10 2.0347 - 1.9645 1.00 2643 134 0.2448 0.3022 REMARK 3 11 1.9645 - 1.9031 1.00 2671 118 0.2823 0.2947 REMARK 3 12 1.9031 - 1.8487 1.00 2648 139 0.3023 0.3492 REMARK 3 13 1.8487 - 1.8000 1.00 2664 134 0.3247 0.3240 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.220 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.15 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 3024 REMARK 3 ANGLE : 1.303 4062 REMARK 3 CHIRALITY : 0.092 490 REMARK 3 PLANARITY : 0.005 506 REMARK 3 DIHEDRAL : 19.052 1174 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 18 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 11:46 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.2292 11.1935 0.4196 REMARK 3 T TENSOR REMARK 3 T11: 0.3104 T22: 0.2827 REMARK 3 T33: 0.2429 T12: -0.0012 REMARK 3 T13: 0.0075 T23: -0.0336 REMARK 3 L TENSOR REMARK 3 L11: 7.7874 L22: 6.4594 REMARK 3 L33: 6.0715 L12: 0.0178 REMARK 3 L13: 1.5238 L23: 1.1698 REMARK 3 S TENSOR REMARK 3 S11: -0.1118 S12: -0.3535 S13: -0.2167 REMARK 3 S21: 0.5673 S22: 0.2507 S23: 0.2819 REMARK 3 S31: -0.1057 S32: -0.3917 S33: -0.1733 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 47:70 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.0715 15.1729 -13.8146 REMARK 3 T TENSOR REMARK 3 T11: 0.4966 T22: 0.3392 REMARK 3 T33: 0.3162 T12: 0.0458 REMARK 3 T13: 0.0571 T23: 0.0218 REMARK 3 L TENSOR REMARK 3 L11: 2.1295 L22: 3.8406 REMARK 3 L33: 8.7430 L12: 2.3784 REMARK 3 L13: 1.1656 L23: -0.6138 REMARK 3 S TENSOR REMARK 3 S11: 0.0405 S12: 0.5275 S13: 0.3211 REMARK 3 S21: -1.1500 S22: 0.2352 S23: -0.1150 REMARK 3 S31: -0.4824 S32: -0.1229 S33: -0.1968 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 71:89 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.3232 8.1554 -14.9189 REMARK 3 T TENSOR REMARK 3 T11: 0.6429 T22: 0.3535 REMARK 3 T33: 0.3460 T12: -0.0670 REMARK 3 T13: -0.0830 T23: 0.0317 REMARK 3 L TENSOR REMARK 3 L11: 8.6855 L22: 3.5085 REMARK 3 L33: 6.5439 L12: -0.6102 REMARK 3 L13: 2.6409 L23: 2.3653 REMARK 3 S TENSOR REMARK 3 S11: 0.0715 S12: 0.7687 S13: -0.0407 REMARK 3 S21: -1.0458 S22: -0.1299 S23: 0.2195 REMARK 3 S31: 0.4988 S32: -0.3311 S33: -0.0980 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESID 90:105 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.1556 17.8754 1.5841 REMARK 3 T TENSOR REMARK 3 T11: 0.4269 T22: 0.5703 REMARK 3 T33: 0.4493 T12: 0.0318 REMARK 3 T13: -0.0470 T23: 0.0251 REMARK 3 L TENSOR REMARK 3 L11: 7.6921 L22: 5.2424 REMARK 3 L33: 5.7503 L12: 3.4085 REMARK 3 L13: 1.4742 L23: 5.0681 REMARK 3 S TENSOR REMARK 3 S11: -0.5510 S12: 0.1419 S13: 0.7927 REMARK 3 S21: -0.1408 S22: -0.0867 S23: 1.5584 REMARK 3 S31: -0.6226 S32: -0.7461 S33: 0.6438 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN B AND (RESID 14:28 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.2963 22.8273 2.2993 REMARK 3 T TENSOR REMARK 3 T11: 0.5338 T22: 0.5482 REMARK 3 T33: 0.4912 T12: -0.0301 REMARK 3 T13: -0.1039 T23: 0.1294 REMARK 3 L TENSOR REMARK 3 L11: 8.0105 L22: 5.6957 REMARK 3 L33: 1.7862 L12: -0.1985 REMARK 3 L13: -0.9446 L23: 2.6905 REMARK 3 S TENSOR REMARK 3 S11: -0.1163 S12: 1.3690 S13: 1.4702 REMARK 3 S21: -1.1436 S22: 0.0810 S23: 0.8572 REMARK 3 S31: -0.7442 S32: -0.1946 S33: -0.1087 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN B AND (RESID 29:57 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.0389 10.6567 20.9225 REMARK 3 T TENSOR REMARK 3 T11: 0.3435 T22: 0.3137 REMARK 3 T33: 0.2698 T12: -0.0126 REMARK 3 T13: -0.0205 T23: 0.0314 REMARK 3 L TENSOR REMARK 3 L11: 4.6897 L22: 5.6031 REMARK 3 L33: 8.5351 L12: 0.1580 REMARK 3 L13: 1.2149 L23: -0.7307 REMARK 3 S TENSOR REMARK 3 S11: 0.3531 S12: -0.2304 S13: -0.4885 REMARK 3 S21: 0.3863 S22: -0.0171 S23: 0.2266 REMARK 3 S31: 0.4716 S32: -0.4109 S33: -0.3558 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN B AND (RESID 58:71 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.9563 17.1158 17.3614 REMARK 3 T TENSOR REMARK 3 T11: 0.3617 T22: 0.3616 REMARK 3 T33: 0.3164 T12: -0.0038 REMARK 3 T13: 0.0112 T23: 0.0153 REMARK 3 L TENSOR REMARK 3 L11: 5.0004 L22: 4.5941 REMARK 3 L33: 8.2596 L12: -4.5342 REMARK 3 L13: 6.2555 L23: -5.7985 REMARK 3 S TENSOR REMARK 3 S11: -0.2710 S12: -0.0823 S13: 0.1548 REMARK 3 S21: 0.6807 S22: 0.0187 S23: -0.6449 REMARK 3 S31: -0.4545 S32: 0.4255 S33: 0.1435 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN B AND (RESID 72:89 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.5455 22.0396 25.7562 REMARK 3 T TENSOR REMARK 3 T11: 0.3824 T22: 0.4283 REMARK 3 T33: 0.2645 T12: 0.0903 REMARK 3 T13: 0.0614 T23: -0.0525 REMARK 3 L TENSOR REMARK 3 L11: 5.2926 L22: 8.8131 REMARK 3 L33: 2.6378 L12: 0.2433 REMARK 3 L13: -2.8482 L23: -0.1585 REMARK 3 S TENSOR REMARK 3 S11: -0.2703 S12: -1.0961 S13: 0.4402 REMARK 3 S21: 0.8712 S22: 0.2732 S23: 0.0089 REMARK 3 S31: -0.5628 S32: -0.4264 S33: -0.0124 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN B AND (RESID 90:105 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.9771 12.8860 11.6703 REMARK 3 T TENSOR REMARK 3 T11: 0.4393 T22: 0.6051 REMARK 3 T33: 0.3494 T12: 0.0238 REMARK 3 T13: 0.0566 T23: 0.0968 REMARK 3 L TENSOR REMARK 3 L11: 9.7656 L22: 3.3972 REMARK 3 L33: 8.9497 L12: 1.3712 REMARK 3 L13: 3.7310 L23: 5.4286 REMARK 3 S TENSOR REMARK 3 S11: 0.1440 S12: -0.8513 S13: -0.3006 REMARK 3 S21: 0.2691 S22: -0.3573 S23: 0.7766 REMARK 3 S31: 0.8999 S32: -0.7394 S33: 0.2818 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN C AND (RESID 11:40 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.1581 26.9480 35.8595 REMARK 3 T TENSOR REMARK 3 T11: 0.3300 T22: 0.3422 REMARK 3 T33: 0.2494 T12: 0.0240 REMARK 3 T13: -0.0314 T23: 0.0016 REMARK 3 L TENSOR REMARK 3 L11: 6.9882 L22: 6.4695 REMARK 3 L33: 7.6840 L12: 0.5253 REMARK 3 L13: 0.3754 L23: 0.1612 REMARK 3 S TENSOR REMARK 3 S11: -0.1971 S12: 0.2614 S13: 0.4583 REMARK 3 S21: -0.9188 S22: -0.0089 S23: -0.0381 REMARK 3 S31: -0.1996 S32: 0.0744 S33: 0.1011 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN C AND (RESID 41:89 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.1896 17.0072 42.5864 REMARK 3 T TENSOR REMARK 3 T11: 0.4762 T22: 0.4966 REMARK 3 T33: 0.4000 T12: -0.1751 REMARK 3 T13: -0.0185 T23: 0.0323 REMARK 3 L TENSOR REMARK 3 L11: 5.4117 L22: 5.3456 REMARK 3 L33: 4.9111 L12: 1.4049 REMARK 3 L13: -1.6774 L23: -0.5491 REMARK 3 S TENSOR REMARK 3 S11: -0.2346 S12: -0.1565 S13: -0.0788 REMARK 3 S21: -0.0005 S22: 0.1370 S23: 0.9409 REMARK 3 S31: 1.1897 S32: -1.3336 S33: 0.0785 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN C AND (RESID 90:105 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.4832 16.7567 30.4011 REMARK 3 T TENSOR REMARK 3 T11: 0.5649 T22: 0.4522 REMARK 3 T33: 0.3477 T12: -0.0496 REMARK 3 T13: -0.0976 T23: 0.0234 REMARK 3 L TENSOR REMARK 3 L11: 4.1359 L22: 8.0792 REMARK 3 L33: 3.4564 L12: -3.4516 REMARK 3 L13: 3.4321 L23: -2.0094 REMARK 3 S TENSOR REMARK 3 S11: 0.2685 S12: -0.2662 S13: -0.5294 REMARK 3 S21: -0.5174 S22: 0.1572 S23: 0.2298 REMARK 3 S31: 0.5850 S32: -0.0079 S33: -0.5212 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN D AND (RESID 14:28 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.1624 18.1849 40.0866 REMARK 3 T TENSOR REMARK 3 T11: 0.5186 T22: 0.3479 REMARK 3 T33: 0.3720 T12: 0.0034 REMARK 3 T13: 0.0120 T23: 0.0145 REMARK 3 L TENSOR REMARK 3 L11: 9.2479 L22: 1.9652 REMARK 3 L33: 3.6587 L12: -2.7429 REMARK 3 L13: -0.0499 L23: 0.3895 REMARK 3 S TENSOR REMARK 3 S11: -0.0782 S12: -0.5923 S13: -1.0591 REMARK 3 S21: -0.1977 S22: -0.0938 S23: 0.7838 REMARK 3 S31: 1.2747 S32: 0.2379 S33: 0.0684 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN D AND (RESID 29:40 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.5480 34.2972 30.8769 REMARK 3 T TENSOR REMARK 3 T11: 0.3055 T22: 0.3593 REMARK 3 T33: 0.3940 T12: -0.0759 REMARK 3 T13: -0.0482 T23: 0.0827 REMARK 3 L TENSOR REMARK 3 L11: 8.7053 L22: 9.4801 REMARK 3 L33: 8.4481 L12: 0.2928 REMARK 3 L13: -4.0073 L23: 1.2136 REMARK 3 S TENSOR REMARK 3 S11: 0.1555 S12: 0.4708 S13: 1.1700 REMARK 3 S21: -0.1656 S22: 0.0243 S23: 0.3288 REMARK 3 S31: 0.0481 S32: 0.0224 S33: -0.2196 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN D AND (RESID 41:57 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4369 38.0778 24.3331 REMARK 3 T TENSOR REMARK 3 T11: 0.7528 T22: 0.5912 REMARK 3 T33: 0.7477 T12: 0.0180 REMARK 3 T13: 0.0246 T23: 0.2643 REMARK 3 L TENSOR REMARK 3 L11: 8.5604 L22: 2.8891 REMARK 3 L33: 9.6209 L12: -1.6769 REMARK 3 L13: -2.6549 L23: 0.2824 REMARK 3 S TENSOR REMARK 3 S11: 0.6320 S12: 1.1178 S13: 1.7993 REMARK 3 S21: -1.1096 S22: -0.3558 S23: -1.0945 REMARK 3 S31: -1.4139 S32: -0.1634 S33: -0.0446 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN D AND (RESID 58:71 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.0532 34.6619 36.9533 REMARK 3 T TENSOR REMARK 3 T11: 0.7405 T22: 0.5740 REMARK 3 T33: 0.5550 T12: -0.1164 REMARK 3 T13: -0.0829 T23: -0.0269 REMARK 3 L TENSOR REMARK 3 L11: 4.6872 L22: 4.1156 REMARK 3 L33: 2.9483 L12: -4.2922 REMARK 3 L13: 1.7007 L23: -2.1133 REMARK 3 S TENSOR REMARK 3 S11: -0.1864 S12: -0.8343 S13: 0.8884 REMARK 3 S21: 0.4893 S22: -0.1702 S23: -0.3174 REMARK 3 S31: -1.5590 S32: 0.1801 S33: 0.4490 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN D AND (RESID 72:89 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.6004 30.2779 27.3149 REMARK 3 T TENSOR REMARK 3 T11: 0.5145 T22: 0.6414 REMARK 3 T33: 0.5659 T12: -0.0190 REMARK 3 T13: 0.0981 T23: 0.1292 REMARK 3 L TENSOR REMARK 3 L11: 3.2980 L22: 8.2342 REMARK 3 L33: 3.4647 L12: 2.4330 REMARK 3 L13: -3.3479 L23: -2.6017 REMARK 3 S TENSOR REMARK 3 S11: -0.0427 S12: -0.2658 S13: -0.2231 REMARK 3 S21: -0.6037 S22: -0.3324 S23: -1.3850 REMARK 3 S31: -0.2764 S32: 0.9925 S33: 0.1842 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN D AND (RESID 90:105 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.9647 25.5469 25.0890 REMARK 3 T TENSOR REMARK 3 T11: 0.5840 T22: 0.4801 REMARK 3 T33: 0.3476 T12: -0.0621 REMARK 3 T13: -0.0659 T23: 0.0392 REMARK 3 L TENSOR REMARK 3 L11: 3.6285 L22: 8.4303 REMARK 3 L33: 2.9908 L12: -2.3481 REMARK 3 L13: -0.2385 L23: 3.4843 REMARK 3 S TENSOR REMARK 3 S11: 0.1667 S12: 0.7846 S13: -0.0931 REMARK 3 S21: -0.9777 S22: -0.1370 S23: 0.4506 REMARK 3 S31: 0.0539 S32: 0.1877 S33: -0.0104 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4K2E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-APR-13. REMARK 100 THE DEPOSITION ID IS D_1000078804. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : OSMIC CONFOCAL MAX-FLUX OPTIC REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36262 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 26.531 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 2.750 REMARK 200 R MERGE (I) : 0.04400 REMARK 200 R SYM (I) : 0.04400 REMARK 200 FOR THE DATA SET : 10.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.69 REMARK 200 R MERGE FOR SHELL (I) : 0.49600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3JTH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 8000, 0.05M POTASSIUM REMARK 280 PHOSPHATE MONOBASIC, PH 7.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 53.16700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 21.09400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 53.16700 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 21.09400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2700 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 TYR A 3 REMARK 465 LEU A 4 REMARK 465 LYS A 5 REMARK 465 GLY A 6 REMARK 465 ALA A 7 REMARK 465 PRO A 8 REMARK 465 MET A 9 REMARK 465 ASN A 10 REMARK 465 ALA A 106 REMARK 465 ASN A 107 REMARK 465 GLN A 108 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 HIS B -1 REMARK 465 MET B 0 REMARK 465 MET B 1 REMARK 465 PRO B 2 REMARK 465 TYR B 3 REMARK 465 LEU B 4 REMARK 465 LYS B 5 REMARK 465 GLY B 6 REMARK 465 ALA B 7 REMARK 465 PRO B 8 REMARK 465 MET B 9 REMARK 465 ASN B 10 REMARK 465 LEU B 11 REMARK 465 GLN B 12 REMARK 465 GLU B 13 REMARK 465 ALA B 106 REMARK 465 ASN B 107 REMARK 465 GLN B 108 REMARK 465 GLY C -3 REMARK 465 SER C -2 REMARK 465 HIS C -1 REMARK 465 MET C 0 REMARK 465 MET C 1 REMARK 465 PRO C 2 REMARK 465 TYR C 3 REMARK 465 LEU C 4 REMARK 465 LYS C 5 REMARK 465 GLY C 6 REMARK 465 ALA C 7 REMARK 465 PRO C 8 REMARK 465 MET C 9 REMARK 465 ASN C 10 REMARK 465 ALA C 106 REMARK 465 ASN C 107 REMARK 465 GLN C 108 REMARK 465 GLY D -3 REMARK 465 SER D -2 REMARK 465 HIS D -1 REMARK 465 MET D 0 REMARK 465 MET D 1 REMARK 465 PRO D 2 REMARK 465 TYR D 3 REMARK 465 LEU D 4 REMARK 465 LYS D 5 REMARK 465 GLY D 6 REMARK 465 ALA D 7 REMARK 465 PRO D 8 REMARK 465 MET D 9 REMARK 465 ASN D 10 REMARK 465 LEU D 11 REMARK 465 GLN D 12 REMARK 465 GLU D 13 REMARK 465 ALA D 106 REMARK 465 ASN D 107 REMARK 465 GLN D 108 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD CSO D 38 O HOH D 227 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 80 -117.11 48.77 REMARK 500 SER A 88 -77.33 -105.90 REMARK 500 CYS A 104 -81.25 -106.12 REMARK 500 ALA B 80 -126.63 54.28 REMARK 500 SER B 88 -84.55 -90.73 REMARK 500 ALA C 80 -88.10 61.58 REMARK 500 SER C 88 -87.20 -90.27 REMARK 500 GLU D 55 76.54 35.88 REMARK 500 GLN D 58 -8.72 -57.64 REMARK 500 ALA D 80 -116.35 49.63 REMARK 500 SER D 88 -73.56 -87.55 REMARK 500 REMARK 500 REMARK: NULL DBREF 4K2E A 1 108 UNP P52695 HLYU_VIBCH 1 108 DBREF 4K2E B 1 108 UNP P52695 HLYU_VIBCH 1 108 DBREF 4K2E C 1 108 UNP P52695 HLYU_VIBCH 1 108 DBREF 4K2E D 1 108 UNP P52695 HLYU_VIBCH 1 108 SEQADV 4K2E GLY A -3 UNP P52695 EXPRESSION TAG SEQADV 4K2E SER A -2 UNP P52695 EXPRESSION TAG SEQADV 4K2E HIS A -1 UNP P52695 EXPRESSION TAG SEQADV 4K2E MET A 0 UNP P52695 EXPRESSION TAG SEQADV 4K2E GLY B -3 UNP P52695 EXPRESSION TAG SEQADV 4K2E SER B -2 UNP P52695 EXPRESSION TAG SEQADV 4K2E HIS B -1 UNP P52695 EXPRESSION TAG SEQADV 4K2E MET B 0 UNP P52695 EXPRESSION TAG SEQADV 4K2E GLY C -3 UNP P52695 EXPRESSION TAG SEQADV 4K2E SER C -2 UNP P52695 EXPRESSION TAG SEQADV 4K2E HIS C -1 UNP P52695 EXPRESSION TAG SEQADV 4K2E MET C 0 UNP P52695 EXPRESSION TAG SEQADV 4K2E GLY D -3 UNP P52695 EXPRESSION TAG SEQADV 4K2E SER D -2 UNP P52695 EXPRESSION TAG SEQADV 4K2E HIS D -1 UNP P52695 EXPRESSION TAG SEQADV 4K2E MET D 0 UNP P52695 EXPRESSION TAG SEQRES 1 A 112 GLY SER HIS MET MET PRO TYR LEU LYS GLY ALA PRO MET SEQRES 2 A 112 ASN LEU GLN GLU MET GLU LYS ASN SER ALA LYS ALA VAL SEQRES 3 A 112 VAL LEU LEU LYS ALA MET ALA ASN GLU ARG ARG LEU GLN SEQRES 4 A 112 ILE LEU CSO MET LEU LEU ASP ASN GLU LEU SER VAL GLY SEQRES 5 A 112 GLU LEU SER SER ARG LEU GLU LEU SER GLN SER ALA LEU SEQRES 6 A 112 SER GLN HIS LEU ALA TRP LEU ARG ARG ASP GLY LEU VAL SEQRES 7 A 112 ASN THR ARG LYS GLU ALA GLN THR VAL PHE TYR THR LEU SEQRES 8 A 112 SER SER THR GLU VAL LYS ALA MET ILE GLU LEU LEU HIS SEQRES 9 A 112 ARG LEU TYR CYS GLN ALA ASN GLN SEQRES 1 B 112 GLY SER HIS MET MET PRO TYR LEU LYS GLY ALA PRO MET SEQRES 2 B 112 ASN LEU GLN GLU MET GLU LYS ASN SER ALA LYS ALA VAL SEQRES 3 B 112 VAL LEU LEU LYS ALA MET ALA ASN GLU ARG ARG LEU GLN SEQRES 4 B 112 ILE LEU CSO MET LEU LEU ASP ASN GLU LEU SER VAL GLY SEQRES 5 B 112 GLU LEU SER SER ARG LEU GLU LEU SER GLN SER ALA LEU SEQRES 6 B 112 SER GLN HIS LEU ALA TRP LEU ARG ARG ASP GLY LEU VAL SEQRES 7 B 112 ASN THR ARG LYS GLU ALA GLN THR VAL PHE TYR THR LEU SEQRES 8 B 112 SER SER THR GLU VAL LYS ALA MET ILE GLU LEU LEU HIS SEQRES 9 B 112 ARG LEU TYR CYS GLN ALA ASN GLN SEQRES 1 C 112 GLY SER HIS MET MET PRO TYR LEU LYS GLY ALA PRO MET SEQRES 2 C 112 ASN LEU GLN GLU MET GLU LYS ASN SER ALA LYS ALA VAL SEQRES 3 C 112 VAL LEU LEU LYS ALA MET ALA ASN GLU ARG ARG LEU GLN SEQRES 4 C 112 ILE LEU CSO MET LEU LEU ASP ASN GLU LEU SER VAL GLY SEQRES 5 C 112 GLU LEU SER SER ARG LEU GLU LEU SER GLN SER ALA LEU SEQRES 6 C 112 SER GLN HIS LEU ALA TRP LEU ARG ARG ASP GLY LEU VAL SEQRES 7 C 112 ASN THR ARG LYS GLU ALA GLN THR VAL PHE TYR THR LEU SEQRES 8 C 112 SER SER THR GLU VAL LYS ALA MET ILE GLU LEU LEU HIS SEQRES 9 C 112 ARG LEU TYR CYS GLN ALA ASN GLN SEQRES 1 D 112 GLY SER HIS MET MET PRO TYR LEU LYS GLY ALA PRO MET SEQRES 2 D 112 ASN LEU GLN GLU MET GLU LYS ASN SER ALA LYS ALA VAL SEQRES 3 D 112 VAL LEU LEU LYS ALA MET ALA ASN GLU ARG ARG LEU GLN SEQRES 4 D 112 ILE LEU CSO MET LEU LEU ASP ASN GLU LEU SER VAL GLY SEQRES 5 D 112 GLU LEU SER SER ARG LEU GLU LEU SER GLN SER ALA LEU SEQRES 6 D 112 SER GLN HIS LEU ALA TRP LEU ARG ARG ASP GLY LEU VAL SEQRES 7 D 112 ASN THR ARG LYS GLU ALA GLN THR VAL PHE TYR THR LEU SEQRES 8 D 112 SER SER THR GLU VAL LYS ALA MET ILE GLU LEU LEU HIS SEQRES 9 D 112 ARG LEU TYR CYS GLN ALA ASN GLN MODRES 4K2E CSO A 38 CYS S-HYDROXYCYSTEINE MODRES 4K2E CSO B 38 CYS S-HYDROXYCYSTEINE MODRES 4K2E CSO C 38 CYS S-HYDROXYCYSTEINE MODRES 4K2E CSO D 38 CYS S-HYDROXYCYSTEINE HET CSO A 38 7 HET CSO B 38 7 HET CSO C 38 7 HET CSO D 38 7 HETNAM CSO S-HYDROXYCYSTEINE FORMUL 1 CSO 4(C3 H7 N O3 S) FORMUL 5 HOH *203(H2 O) HELIX 1 1 LEU A 11 ALA A 29 1 19 HELIX 2 2 ASN A 30 LEU A 41 1 12 HELIX 3 3 VAL A 47 GLU A 55 1 9 HELIX 4 4 SER A 57 ASP A 71 1 15 HELIX 5 5 SER A 89 CYS A 104 1 16 HELIX 6 6 GLU B 15 ALA B 29 1 15 HELIX 7 7 ASN B 30 LEU B 41 1 12 HELIX 8 8 VAL B 47 GLU B 55 1 9 HELIX 9 9 SER B 57 ASP B 71 1 15 HELIX 10 10 SER B 89 CYS B 104 1 16 HELIX 11 11 GLN C 12 ALA C 29 1 18 HELIX 12 12 ASN C 30 LEU C 41 1 12 HELIX 13 13 VAL C 47 GLU C 55 1 9 HELIX 14 14 SER C 57 ASP C 71 1 15 HELIX 15 15 SER C 89 CYS C 104 1 16 HELIX 16 16 GLU D 15 ALA D 29 1 15 HELIX 17 17 ASN D 30 LEU D 41 1 12 HELIX 18 18 VAL D 47 GLU D 55 1 9 HELIX 19 19 SER D 57 ASP D 71 1 15 HELIX 20 20 SER D 89 GLN D 105 1 17 SHEET 1 A 3 LEU A 45 SER A 46 0 SHEET 2 A 3 THR A 82 LEU A 87 -1 O TYR A 85 N LEU A 45 SHEET 3 A 3 VAL A 74 GLU A 79 -1 N ARG A 77 O PHE A 84 SHEET 1 B 3 LEU B 45 SER B 46 0 SHEET 2 B 3 THR B 82 LEU B 87 -1 O TYR B 85 N LEU B 45 SHEET 3 B 3 VAL B 74 GLU B 79 -1 N ARG B 77 O PHE B 84 SHEET 1 C 3 LEU C 45 SER C 46 0 SHEET 2 C 3 THR C 82 LEU C 87 -1 O TYR C 85 N LEU C 45 SHEET 3 C 3 VAL C 74 GLU C 79 -1 N GLU C 79 O THR C 82 SHEET 1 D 3 LEU D 45 SER D 46 0 SHEET 2 D 3 THR D 82 LEU D 87 -1 O TYR D 85 N LEU D 45 SHEET 3 D 3 VAL D 74 GLU D 79 -1 N ARG D 77 O PHE D 84 LINK C LEU A 37 N CSO A 38 1555 1555 1.33 LINK C CSO A 38 N MET A 39 1555 1555 1.33 LINK C LEU B 37 N CSO B 38 1555 1555 1.34 LINK C CSO B 38 N MET B 39 1555 1555 1.33 LINK C LEU C 37 N CSO C 38 1555 1555 1.33 LINK C CSO C 38 N MET C 39 1555 1555 1.33 LINK C LEU D 37 N CSO D 38 1555 1555 1.32 LINK C CSO D 38 N MET D 39 1555 1555 1.33 CRYST1 106.334 42.188 88.288 90.00 93.60 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009404 0.000000 0.000591 0.00000 SCALE2 0.000000 0.023704 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011349 0.00000