HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 15-APR-13 4K61 TITLE CRYSTAL STRUCTURE OF A DUF2874 FAMILY PROTEIN (BACUNI_01296) FROM TITLE 2 BACTEROIDES UNIFORMIS ATCC 8492 AT 1.70 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES UNIFORMIS; SOURCE 3 ORGANISM_TAXID: 411479; SOURCE 4 STRAIN: ATCC 8492; SOURCE 5 GENE: BACUNI_01296; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS DUF2874, PF11396 FAMILY PROTEIN, STRUCTURAL GENOMICS, JOINT CENTER KEYWDS 2 FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI- KEYWDS 3 BIOLOGY, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 01-FEB-23 4K61 1 SEQADV LINK REVDAT 4 24-JAN-18 4K61 1 JRNL REVDAT 3 15-NOV-17 4K61 1 REMARK REVDAT 2 24-DEC-14 4K61 1 TITLE REVDAT 1 01-MAY-13 4K61 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN (BACUNI_01296) JRNL TITL 2 FROM BACTEROIDES UNIFORMIS ATCC 8492 AT 1.70 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.44 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 34780 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1745 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2397 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.18 REMARK 3 BIN R VALUE (WORKING SET) : 0.2930 REMARK 3 BIN FREE R VALUE SET COUNT : 129 REMARK 3 BIN FREE R VALUE : 0.3210 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2220 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 260 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.54 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.96 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.55000 REMARK 3 B22 (A**2) : 1.55000 REMARK 3 B33 (A**2) : -3.09000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.110 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.102 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.090 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.573 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2365 ; 0.010 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2118 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3253 ; 1.392 ; 1.926 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4868 ; 1.012 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 296 ; 6.375 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 118 ;39.971 ;25.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 309 ;14.433 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;11.117 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 341 ; 0.086 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2764 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 592 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1130 ; 2.393 ; 2.639 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1129 ; 2.393 ; 2.639 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1414 ; 3.889 ; 4.915 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 160 REMARK 3 ORIGIN FOR THE GROUP (A): 15.8510 10.7250 14.0000 REMARK 3 T TENSOR REMARK 3 T11: 0.0516 T22: 0.1009 REMARK 3 T33: 0.2356 T12: 0.0402 REMARK 3 T13: 0.0057 T23: 0.0051 REMARK 3 L TENSOR REMARK 3 L11: 0.3300 L22: 1.1361 REMARK 3 L33: 6.8520 L12: 0.1082 REMARK 3 L13: -0.9861 L23: 1.3726 REMARK 3 S TENSOR REMARK 3 S11: -0.0266 S12: 0.0267 S13: -0.0427 REMARK 3 S21: -0.0374 S22: -0.1311 S23: 0.0229 REMARK 3 S31: -0.1970 S32: -0.5791 S33: 0.1577 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 23 B 160 REMARK 3 ORIGIN FOR THE GROUP (A): 13.9340 31.8220 28.3100 REMARK 3 T TENSOR REMARK 3 T11: 0.1630 T22: 0.0962 REMARK 3 T33: 0.2885 T12: -0.0299 REMARK 3 T13: -0.0870 T23: -0.0137 REMARK 3 L TENSOR REMARK 3 L11: 1.2200 L22: 2.3711 REMARK 3 L33: 5.1688 L12: -0.0678 REMARK 3 L13: 0.9359 L23: 0.5995 REMARK 3 S TENSOR REMARK 3 S11: -0.1961 S12: -0.0173 S13: 0.2500 REMARK 3 S21: -0.4450 S22: 0.0021 S23: 0.0924 REMARK 3 S31: -0.2793 S32: -0.4462 S33: 0.1940 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. ATOM RECORD CONTAINS SUM OF TLS AND REMARK 3 RESIDUAL B FACTORS. 3. ANISOU RECORD CONTAINS SUM OF TLS AND REMARK 3 RESIDUAL U FACTORS. 4. WATERS WERE EXCLUDED FROM AUTOMATIC TLS REMARK 3 ASSIGNMENT. 5. A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. REMARK 4 REMARK 4 4K61 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-APR-13. REMARK 100 THE DEPOSITION ID IS D_1000078935. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-MAR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97926,0.91837 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING); REMARK 200 SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE JULY 4, 2012 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34782 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 27.440 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.04600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.2900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.78800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05M CALCIUM ACETATE, 40% 1,2 REMARK 280 -PROPANEDIOL, 0.1M SODIUM ACETATE PH 4.5, NANODROP, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 43.38650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.38650 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 42.81650 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 43.38650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.38650 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 42.81650 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 43.38650 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 43.38650 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 42.81650 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 43.38650 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 43.38650 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 42.81650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A REMARK 300 MONOMER AS THE SIGNIFICANT OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 0 REMARK 465 ASP B 22 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 23 -56.50 66.69 REMARK 500 GLU A 48 -107.18 37.07 REMARK 500 GLU A 80 -45.24 74.54 REMARK 500 ASN A 126 49.28 -92.76 REMARK 500 LEU A 127 -71.64 71.93 REMARK 500 GLU B 48 -128.80 52.31 REMARK 500 GLU B 80 -46.21 71.65 REMARK 500 ASN B 126 62.96 -66.68 REMARK 500 LEU B 127 -77.47 58.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN A 126 LEU A 127 147.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-417914 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 22-160 OF THE TARGET REMARK 999 SEQUENCE. DBREF 4K61 A 22 160 UNP A7V158 A7V158_BACUN 22 160 DBREF 4K61 B 22 160 UNP A7V158 A7V158_BACUN 22 160 SEQADV 4K61 GLY A 0 UNP A7V158 EXPRESSION TAG SEQADV 4K61 GLY B 0 UNP A7V158 EXPRESSION TAG SEQRES 1 A 140 GLY ASP TRP ALA PRO ALA ASP VAL GLN ALA ALA LEU LYS SEQRES 2 A 140 LYS MSE TYR PRO THR ALA ASP GLY VAL ALA TRP SER HIS SEQRES 3 A 140 ASP GLU SER TYR TYR VAL ALA ASP PHE LEU MSE ASN GLY SEQRES 4 A 140 PHE ASP THR LYS VAL TRP PHE ASP GLY GLN ALA GLN TRP SEQRES 5 A 140 VAL MSE GLN GLN THR ASP TRP GLU THR MSE ASP GLU VAL SEQRES 6 A 140 PRO PRO ALA VAL TYR ASN ALA PHE ALA ALA SER GLU TYR SEQRES 7 A 140 SER GLY GLY MSE VAL GLN ASN VAL THR TRP VAL GLN PHE SEQRES 8 A 140 PRO LYS TRP GLN SER ILE VAL ALA VAL GLU VAL GLY MSE SEQRES 9 A 140 ALA ASN LEU GLN THR LYS TYR GLN ILE LEU PHE THR PRO SEQRES 10 A 140 THR GLY GLU ILE ILE ARG ALA ARG ASN VAL THR TYR THR SEQRES 11 A 140 TYR ASN PRO LEU GLY ALA ALA THR PHE LEU SEQRES 1 B 140 GLY ASP TRP ALA PRO ALA ASP VAL GLN ALA ALA LEU LYS SEQRES 2 B 140 LYS MSE TYR PRO THR ALA ASP GLY VAL ALA TRP SER HIS SEQRES 3 B 140 ASP GLU SER TYR TYR VAL ALA ASP PHE LEU MSE ASN GLY SEQRES 4 B 140 PHE ASP THR LYS VAL TRP PHE ASP GLY GLN ALA GLN TRP SEQRES 5 B 140 VAL MSE GLN GLN THR ASP TRP GLU THR MSE ASP GLU VAL SEQRES 6 B 140 PRO PRO ALA VAL TYR ASN ALA PHE ALA ALA SER GLU TYR SEQRES 7 B 140 SER GLY GLY MSE VAL GLN ASN VAL THR TRP VAL GLN PHE SEQRES 8 B 140 PRO LYS TRP GLN SER ILE VAL ALA VAL GLU VAL GLY MSE SEQRES 9 B 140 ALA ASN LEU GLN THR LYS TYR GLN ILE LEU PHE THR PRO SEQRES 10 B 140 THR GLY GLU ILE ILE ARG ALA ARG ASN VAL THR TYR THR SEQRES 11 B 140 TYR ASN PRO LEU GLY ALA ALA THR PHE LEU MODRES 4K61 MSE A 35 MET SELENOMETHIONINE MODRES 4K61 MSE A 57 MET SELENOMETHIONINE MODRES 4K61 MSE A 74 MET SELENOMETHIONINE MODRES 4K61 MSE A 82 MET SELENOMETHIONINE MODRES 4K61 MSE A 102 MET SELENOMETHIONINE MODRES 4K61 MSE A 124 MET SELENOMETHIONINE MODRES 4K61 MSE B 35 MET SELENOMETHIONINE MODRES 4K61 MSE B 57 MET SELENOMETHIONINE MODRES 4K61 MSE B 74 MET SELENOMETHIONINE MODRES 4K61 MSE B 82 MET SELENOMETHIONINE MODRES 4K61 MSE B 102 MET SELENOMETHIONINE MODRES 4K61 MSE B 124 MET SELENOMETHIONINE HET MSE A 35 8 HET MSE A 57 8 HET MSE A 74 8 HET MSE A 82 8 HET MSE A 102 13 HET MSE A 124 8 HET MSE B 35 8 HET MSE B 57 8 HET MSE B 74 8 HET MSE B 82 8 HET MSE B 102 13 HET MSE B 124 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 3 HOH *260(H2 O) HELIX 1 1 PRO A 25 TYR A 36 1 12 HELIX 2 2 THR A 81 VAL A 85 5 5 HELIX 3 3 PRO A 86 SER A 96 1 11 HELIX 4 4 GLU A 97 GLY A 101 5 5 HELIX 5 5 GLY A 155 LEU A 160 1 6 HELIX 6 6 PRO B 25 TYR B 36 1 12 HELIX 7 7 THR B 81 VAL B 85 5 5 HELIX 8 8 PRO B 86 SER B 96 1 11 HELIX 9 9 GLU B 97 GLY B 101 5 5 HELIX 10 10 GLY B 155 LEU B 160 1 6 SHEET 1 A 8 ALA A 43 ASP A 47 0 SHEET 2 A 8 TYR A 50 MSE A 57 -1 O VAL A 52 N SER A 45 SHEET 3 A 8 PHE A 60 PHE A 66 -1 O THR A 62 N PHE A 55 SHEET 4 A 8 TRP A 72 ASP A 78 -1 O MSE A 74 N TRP A 65 SHEET 5 A 8 MSE A 102 GLN A 110 -1 O GLN A 110 N GLN A 75 SHEET 6 A 8 ILE A 117 GLY A 123 -1 O GLY A 123 N MSE A 102 SHEET 7 A 8 LYS A 130 PHE A 135 -1 O ILE A 133 N VAL A 120 SHEET 8 A 8 ILE A 141 ASN A 146 -1 O ARG A 143 N LEU A 134 SHEET 1 B 8 ALA B 43 ASP B 47 0 SHEET 2 B 8 TYR B 50 MSE B 57 -1 O VAL B 52 N SER B 45 SHEET 3 B 8 PHE B 60 PHE B 66 -1 O PHE B 66 N TYR B 51 SHEET 4 B 8 TRP B 72 ASP B 78 -1 O MSE B 74 N TRP B 65 SHEET 5 B 8 MSE B 102 GLN B 110 -1 O GLN B 110 N GLN B 75 SHEET 6 B 8 ILE B 117 GLY B 123 -1 O GLY B 123 N MSE B 102 SHEET 7 B 8 LYS B 130 PHE B 135 -1 O ILE B 133 N VAL B 120 SHEET 8 B 8 ILE B 141 ASN B 146 -1 O ARG B 143 N LEU B 134 LINK C LYS A 34 N MSE A 35 1555 1555 1.34 LINK C MSE A 35 N TYR A 36 1555 1555 1.33 LINK C LEU A 56 N MSE A 57 1555 1555 1.33 LINK C MSE A 57 N ASN A 58 1555 1555 1.33 LINK C VAL A 73 N MSE A 74 1555 1555 1.33 LINK C MSE A 74 N GLN A 75 1555 1555 1.33 LINK C THR A 81 N MSE A 82 1555 1555 1.33 LINK C MSE A 82 N ASP A 83 1555 1555 1.34 LINK C GLY A 101 N MSE A 102 1555 1555 1.33 LINK C MSE A 102 N VAL A 103 1555 1555 1.33 LINK C GLY A 123 N MSE A 124 1555 1555 1.33 LINK C MSE A 124 N ALA A 125 1555 1555 1.34 LINK C LYS B 34 N MSE B 35 1555 1555 1.33 LINK C MSE B 35 N TYR B 36 1555 1555 1.33 LINK C LEU B 56 N MSE B 57 1555 1555 1.33 LINK C MSE B 57 N ASN B 58 1555 1555 1.35 LINK C VAL B 73 N MSE B 74 1555 1555 1.33 LINK C MSE B 74 N GLN B 75 1555 1555 1.32 LINK C THR B 81 N MSE B 82 1555 1555 1.33 LINK C MSE B 82 N ASP B 83 1555 1555 1.34 LINK C GLY B 101 N MSE B 102 1555 1555 1.33 LINK C MSE B 102 N VAL B 103 1555 1555 1.33 LINK C GLY B 123 N MSE B 124 1555 1555 1.33 LINK C MSE B 124 N ALA B 125 1555 1555 1.33 CRYST1 86.773 86.773 85.633 90.00 90.00 90.00 I 4 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011524 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011524 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011678 0.00000