HEADER HYDROLASE 15-APR-13 4K68 TITLE STRUCTURE OF A NOVEL GH10 ENDOXYLANASE RETRIEVED FROM SUGARCANE SOIL TITLE 2 METAGENOME COMPND MOL_ID: 1; COMPND 2 MOLECULE: GH10 XYLANASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SOIL METAGENOME; SOURCE 3 ORGANISM_TAXID: 410658; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GH10, XYLANASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR C.R.SANTOS,C.C.POLO,T.M.ALVAREZ,D.A.A.PAIXAO,R.F.ALMEIDA,I.O.PEREIRA, AUTHOR 2 F.M.SQUINA,M.T.MURAKAMI REVDAT 3 28-FEB-24 4K68 1 REMARK REVDAT 2 15-NOV-17 4K68 1 REMARK REVDAT 1 23-OCT-13 4K68 0 JRNL AUTH T.M.ALVAREZ,R.GOLDBECK,C.R.DOS SANTOS,D.A.PAIXAO, JRNL AUTH 2 T.A.GONCALVES,J.P.FRANCO CAIRO,R.F.ALMEIDA, JRNL AUTH 3 I.DE OLIVEIRA PEREIRA,G.JACKSON,J.COTA,F.BUCHLI, JRNL AUTH 4 A.P.CITADINI,R.RULLER,C.C.POLO,M.DE OLIVEIRA NETO, JRNL AUTH 5 M.T.MURAKAMI,F.M.SQUINA JRNL TITL DEVELOPMENT AND BIOTECHNOLOGICAL APPLICATION OF A NOVEL JRNL TITL 2 ENDOXYLANASE FAMILY GH10 IDENTIFIED FROM SUGARCANE SOIL JRNL TITL 3 METAGENOME. JRNL REF PLOS ONE V. 8 70014 2013 JRNL REFN ESSN 1932-6203 JRNL PMID 23922891 JRNL DOI 10.1371/JOURNAL.PONE.0070014 REMARK 2 REMARK 2 RESOLUTION. 2.74 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.74 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 20087 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1025 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.2000 - 5.2385 1.00 2822 152 0.2030 0.2542 REMARK 3 2 5.2385 - 4.1592 1.00 2778 160 0.1597 0.2149 REMARK 3 3 4.1592 - 3.6338 1.00 2797 150 0.1771 0.2153 REMARK 3 4 3.6338 - 3.3017 1.00 2798 127 0.2070 0.2765 REMARK 3 5 3.3017 - 3.0652 0.99 2758 164 0.2356 0.2692 REMARK 3 6 3.0652 - 2.8845 0.96 2674 143 0.2625 0.3359 REMARK 3 7 2.8845 - 2.7400 0.87 2435 129 0.2790 0.3322 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.73 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 28.24 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.670 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.92300 REMARK 3 B22 (A**2) : 1.02980 REMARK 3 B33 (A**2) : -8.95280 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -8.91280 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5732 REMARK 3 ANGLE : 0.588 7755 REMARK 3 CHIRALITY : 0.043 818 REMARK 3 PLANARITY : 0.003 993 REMARK 3 DIHEDRAL : 11.868 2152 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 32:106) REMARK 3 ORIGIN FOR THE GROUP (A): -17.2459 4.6597 84.4618 REMARK 3 T TENSOR REMARK 3 T11: 0.4326 T22: 0.1770 REMARK 3 T33: 0.2052 T12: -0.0197 REMARK 3 T13: -0.0171 T23: 0.0781 REMARK 3 L TENSOR REMARK 3 L11: 3.1119 L22: 3.0459 REMARK 3 L33: 2.4320 L12: 1.0880 REMARK 3 L13: 2.0777 L23: 0.8682 REMARK 3 S TENSOR REMARK 3 S11: -0.3767 S12: 0.3104 S13: 0.3109 REMARK 3 S21: -0.3907 S22: 0.2543 S23: 0.3629 REMARK 3 S31: -0.4566 S32: -0.0268 S33: 0.1779 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 107:135) REMARK 3 ORIGIN FOR THE GROUP (A): -26.6010 -12.2075 84.0318 REMARK 3 T TENSOR REMARK 3 T11: 0.3826 T22: 0.2635 REMARK 3 T33: 0.2353 T12: -0.0631 REMARK 3 T13: -0.1991 T23: -0.0121 REMARK 3 L TENSOR REMARK 3 L11: 2.5695 L22: 4.2638 REMARK 3 L33: 0.7483 L12: 2.4844 REMARK 3 L13: -0.1988 L23: 0.6479 REMARK 3 S TENSOR REMARK 3 S11: 0.1328 S12: 0.1577 S13: 0.1504 REMARK 3 S21: 0.5441 S22: -0.3675 S23: 0.2972 REMARK 3 S31: -0.3897 S32: -0.1251 S33: -0.1596 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 136:275) REMARK 3 ORIGIN FOR THE GROUP (A): -13.6493 -15.0639 88.2148 REMARK 3 T TENSOR REMARK 3 T11: 0.1744 T22: 0.1054 REMARK 3 T33: 0.1083 T12: -0.0004 REMARK 3 T13: -0.0329 T23: 0.0156 REMARK 3 L TENSOR REMARK 3 L11: 1.4938 L22: 1.9677 REMARK 3 L33: 2.6186 L12: 0.7739 REMARK 3 L13: 1.2788 L23: 1.0567 REMARK 3 S TENSOR REMARK 3 S11: 0.0028 S12: 0.1637 S13: -0.1774 REMARK 3 S21: -0.0076 S22: 0.0891 S23: -0.1221 REMARK 3 S31: 0.1190 S32: 0.1703 S33: -0.0828 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 276:379) REMARK 3 ORIGIN FOR THE GROUP (A): -11.9315 3.7933 103.6792 REMARK 3 T TENSOR REMARK 3 T11: 0.3385 T22: 0.2008 REMARK 3 T33: 0.1755 T12: -0.0015 REMARK 3 T13: -0.1187 T23: 0.0196 REMARK 3 L TENSOR REMARK 3 L11: 5.5725 L22: 3.6012 REMARK 3 L33: 2.7552 L12: -1.7017 REMARK 3 L13: -1.1136 L23: 0.9936 REMARK 3 S TENSOR REMARK 3 S11: -0.0900 S12: -0.5301 S13: -0.0122 REMARK 3 S21: 0.2503 S22: 0.1294 S23: 0.0809 REMARK 3 S31: -0.1245 S32: 0.0300 S33: -0.0631 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 34:263) REMARK 3 ORIGIN FOR THE GROUP (A): -2.6777 -22.8598 137.1227 REMARK 3 T TENSOR REMARK 3 T11: 0.2865 T22: 0.0905 REMARK 3 T33: 0.1305 T12: 0.0118 REMARK 3 T13: -0.0522 T23: -0.0193 REMARK 3 L TENSOR REMARK 3 L11: 1.7002 L22: 1.1873 REMARK 3 L33: 1.5406 L12: -0.3154 REMARK 3 L13: 0.5173 L23: 0.1858 REMARK 3 S TENSOR REMARK 3 S11: -0.0241 S12: -0.0151 S13: 0.1223 REMARK 3 S21: -0.0822 S22: -0.0398 S23: -0.0632 REMARK 3 S31: -0.0505 S32: -0.1444 S33: 0.0595 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 264:306) REMARK 3 ORIGIN FOR THE GROUP (A): -0.7869 -32.0229 117.4520 REMARK 3 T TENSOR REMARK 3 T11: 0.5021 T22: 0.3369 REMARK 3 T33: 0.4914 T12: 0.1165 REMARK 3 T13: -0.1091 T23: 0.0626 REMARK 3 L TENSOR REMARK 3 L11: 1.7112 L22: 0.4120 REMARK 3 L33: 6.9075 L12: -0.0431 REMARK 3 L13: -1.9794 L23: 0.8998 REMARK 3 S TENSOR REMARK 3 S11: -0.4264 S12: -0.0895 S13: -0.5279 REMARK 3 S21: 0.3063 S22: -0.1825 S23: -0.0673 REMARK 3 S31: 0.6147 S32: 0.9975 S33: 0.5353 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 307:378) REMARK 3 ORIGIN FOR THE GROUP (A): -12.3600 -25.9992 118.5878 REMARK 3 T TENSOR REMARK 3 T11: 0.3283 T22: 0.1550 REMARK 3 T33: 0.2011 T12: 0.0404 REMARK 3 T13: -0.1268 T23: -0.0178 REMARK 3 L TENSOR REMARK 3 L11: 2.4424 L22: 1.8682 REMARK 3 L33: 5.2304 L12: 0.8006 REMARK 3 L13: -1.5163 L23: -1.2135 REMARK 3 S TENSOR REMARK 3 S11: 0.0587 S12: -0.0528 S13: 0.0289 REMARK 3 S21: -0.0355 S22: -0.0120 S23: 0.0762 REMARK 3 S31: 0.1278 S32: -0.2338 S33: -0.0475 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4K68 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-APR-13. REMARK 100 THE DEPOSITION ID IS D_1000078942. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-APR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : W01B-MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.459 REMARK 200 MONOCHROMATOR : DOUBLE-CRYSTAL (SI111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20118 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.740 REMARK 200 RESOLUTION RANGE LOW (A) : 41.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.14300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.74 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.46800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG8000, PH 4.2, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 58.22100 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ILE A 3 REMARK 465 SER A 4 REMARK 465 ARG A 5 REMARK 465 ARG A 6 REMARK 465 LEU A 7 REMARK 465 PHE A 8 REMARK 465 LEU A 9 REMARK 465 ARG A 10 REMARK 465 ASN A 11 REMARK 465 ALA A 12 REMARK 465 ALA A 13 REMARK 465 LEU A 14 REMARK 465 SER A 15 REMARK 465 ALA A 16 REMARK 465 ALA A 17 REMARK 465 LEU A 18 REMARK 465 LEU A 19 REMARK 465 SER A 20 REMARK 465 ILE A 21 REMARK 465 LYS A 22 REMARK 465 GLY A 23 REMARK 465 GLN A 24 REMARK 465 ALA A 25 REMARK 465 ILE A 26 REMARK 465 ALA A 27 REMARK 465 LYS A 28 REMARK 465 ALA A 29 REMARK 465 ALA A 30 REMARK 465 GLU A 31 REMARK 465 TRP A 281 REMARK 465 ASN A 282 REMARK 465 LEU A 283 REMARK 465 PRO A 284 REMARK 465 THR A 285 REMARK 465 ALA A 286 REMARK 465 GLU A 287 REMARK 465 VAL A 288 REMARK 465 SER A 289 REMARK 465 THR A 290 REMARK 465 ARG A 291 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 ILE B 3 REMARK 465 SER B 4 REMARK 465 ARG B 5 REMARK 465 ARG B 6 REMARK 465 LEU B 7 REMARK 465 PHE B 8 REMARK 465 LEU B 9 REMARK 465 ARG B 10 REMARK 465 ASN B 11 REMARK 465 ALA B 12 REMARK 465 ALA B 13 REMARK 465 LEU B 14 REMARK 465 SER B 15 REMARK 465 ALA B 16 REMARK 465 ALA B 17 REMARK 465 LEU B 18 REMARK 465 LEU B 19 REMARK 465 SER B 20 REMARK 465 ILE B 21 REMARK 465 LYS B 22 REMARK 465 GLY B 23 REMARK 465 GLN B 24 REMARK 465 ALA B 25 REMARK 465 ILE B 26 REMARK 465 ALA B 27 REMARK 465 LYS B 28 REMARK 465 ALA B 29 REMARK 465 ALA B 30 REMARK 465 GLU B 31 REMARK 465 ARG B 32 REMARK 465 THR B 33 REMARK 465 LYS B 379 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 41 -3.13 70.08 REMARK 500 ASP A 42 -74.07 -117.00 REMARK 500 ASN A 77 -21.86 -145.07 REMARK 500 LYS A 89 -102.39 -107.78 REMARK 500 ASN A 114 104.65 70.63 REMARK 500 ASN A 128 -158.20 -76.59 REMARK 500 ASP A 246 -68.47 -91.16 REMARK 500 SER A 279 -123.68 -119.82 REMARK 500 ASP B 42 -61.03 -93.75 REMARK 500 ASN B 77 -18.88 -146.77 REMARK 500 LYS B 85 77.51 -154.88 REMARK 500 LYS B 89 -106.74 -108.62 REMARK 500 ASN B 114 99.81 68.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 401 DBREF 4K68 A 1 379 PDB 4K68 4K68 1 379 DBREF 4K68 B 1 379 PDB 4K68 4K68 1 379 SEQRES 1 A 379 MET SER ILE SER ARG ARG LEU PHE LEU ARG ASN ALA ALA SEQRES 2 A 379 LEU SER ALA ALA LEU LEU SER ILE LYS GLY GLN ALA ILE SEQRES 3 A 379 ALA LYS ALA ALA GLU ARG THR GLY ILE LYS ASP PHE TYR SEQRES 4 A 379 LYS ASP ASP PHE ARG ILE GLY THR ALA VAL ALA THR ALA SEQRES 5 A 379 THR LEU THR MET LYS GLU LYS LYS PRO LEU LEU ALA LEU SEQRES 6 A 379 ILE ALA ARG GLU PHE ASN ALA ILE THR PRO GLU ASN CYS SEQRES 7 A 379 MET LYS TRP GLU PRO LEU LYS PRO GLN ASP LYS ASP TRP SEQRES 8 A 379 HIS TRP GLU ALA ALA ASP LYS PHE VAL GLU PHE GLY GLU SEQRES 9 A 379 LYS HIS LYS MET TYR ILE VAL GLY HIS ASN LEU VAL TRP SEQRES 10 A 379 HIS SER GLN VAL PRO LYS GLU VAL PHE LEU ASN GLU SER SEQRES 11 A 379 GLY GLY THR ILE SER LYS GLU ALA LEU THR ALA LYS MET SEQRES 12 A 379 GLN ASP HIS ILE ALA THR LEU ALA GLY ARG TYR LYS GLY SEQRES 13 A 379 ARG ILE GLN ALA TRP ASP VAL VAL ASN GLU ALA VAL GLU SEQRES 14 A 379 ASP ASP GLY SER TRP ARG LYS SER PRO TRP TYR ASN ILE SEQRES 15 A 379 MET GLY GLU ASP PHE ILE ALA LYS ALA PHE THR MET ALA SEQRES 16 A 379 HIS GLU VAL ASP PRO LYS ALA HIS LEU ILE TYR ASN ASP SEQRES 17 A 379 TYR ASN THR GLU SER PRO ILE LYS ARG ASN PHE ILE VAL SEQRES 18 A 379 GLY MET ILE LYS ASN PHE LYS LYS GLN GLY VAL PRO ILE SEQRES 19 A 379 HIS GLY VAL GLY MET GLN GLU HIS LEU ALA ILE ASP GLY SEQRES 20 A 379 PRO SER VAL ASP GLU ILE GLU LYS THR LEU ILE ALA LEU SEQRES 21 A 379 ALA ASP ALA GLY VAL ARG ALA HIS ILE THR GLU LEU ASP SEQRES 22 A 379 ILE ASP VAL LEU PRO SER VAL TRP ASN LEU PRO THR ALA SEQRES 23 A 379 GLU VAL SER THR ARG PHE GLU TYR LYS PRO GLU ARG ASP SEQRES 24 A 379 PRO TYR ILE GLN GLY LEU PRO LYS ASP MET GLU GLU LYS SEQRES 25 A 379 LEU ALA LYS ARG TYR GLU ASP ILE PHE LYS ILE TYR LEU SEQRES 26 A 379 LYS HIS ARG ASP LYS ILE GLU ARG VAL THR LEU TRP GLY SEQRES 27 A 379 THR ALA ASP ASN GLU THR TRP LEU ASN ASP PHE PRO ILE SEQRES 28 A 379 LYS GLY ARG THR ASN TYR PRO LEU LEU PHE ASP ARG ASN SEQRES 29 A 379 GLN LYS PRO LYS PRO ALA TYR PHE ARG LEU LEU ASP LEU SEQRES 30 A 379 LYS LYS SEQRES 1 B 379 MET SER ILE SER ARG ARG LEU PHE LEU ARG ASN ALA ALA SEQRES 2 B 379 LEU SER ALA ALA LEU LEU SER ILE LYS GLY GLN ALA ILE SEQRES 3 B 379 ALA LYS ALA ALA GLU ARG THR GLY ILE LYS ASP PHE TYR SEQRES 4 B 379 LYS ASP ASP PHE ARG ILE GLY THR ALA VAL ALA THR ALA SEQRES 5 B 379 THR LEU THR MET LYS GLU LYS LYS PRO LEU LEU ALA LEU SEQRES 6 B 379 ILE ALA ARG GLU PHE ASN ALA ILE THR PRO GLU ASN CYS SEQRES 7 B 379 MET LYS TRP GLU PRO LEU LYS PRO GLN ASP LYS ASP TRP SEQRES 8 B 379 HIS TRP GLU ALA ALA ASP LYS PHE VAL GLU PHE GLY GLU SEQRES 9 B 379 LYS HIS LYS MET TYR ILE VAL GLY HIS ASN LEU VAL TRP SEQRES 10 B 379 HIS SER GLN VAL PRO LYS GLU VAL PHE LEU ASN GLU SER SEQRES 11 B 379 GLY GLY THR ILE SER LYS GLU ALA LEU THR ALA LYS MET SEQRES 12 B 379 GLN ASP HIS ILE ALA THR LEU ALA GLY ARG TYR LYS GLY SEQRES 13 B 379 ARG ILE GLN ALA TRP ASP VAL VAL ASN GLU ALA VAL GLU SEQRES 14 B 379 ASP ASP GLY SER TRP ARG LYS SER PRO TRP TYR ASN ILE SEQRES 15 B 379 MET GLY GLU ASP PHE ILE ALA LYS ALA PHE THR MET ALA SEQRES 16 B 379 HIS GLU VAL ASP PRO LYS ALA HIS LEU ILE TYR ASN ASP SEQRES 17 B 379 TYR ASN THR GLU SER PRO ILE LYS ARG ASN PHE ILE VAL SEQRES 18 B 379 GLY MET ILE LYS ASN PHE LYS LYS GLN GLY VAL PRO ILE SEQRES 19 B 379 HIS GLY VAL GLY MET GLN GLU HIS LEU ALA ILE ASP GLY SEQRES 20 B 379 PRO SER VAL ASP GLU ILE GLU LYS THR LEU ILE ALA LEU SEQRES 21 B 379 ALA ASP ALA GLY VAL ARG ALA HIS ILE THR GLU LEU ASP SEQRES 22 B 379 ILE ASP VAL LEU PRO SER VAL TRP ASN LEU PRO THR ALA SEQRES 23 B 379 GLU VAL SER THR ARG PHE GLU TYR LYS PRO GLU ARG ASP SEQRES 24 B 379 PRO TYR ILE GLN GLY LEU PRO LYS ASP MET GLU GLU LYS SEQRES 25 B 379 LEU ALA LYS ARG TYR GLU ASP ILE PHE LYS ILE TYR LEU SEQRES 26 B 379 LYS HIS ARG ASP LYS ILE GLU ARG VAL THR LEU TRP GLY SEQRES 27 B 379 THR ALA ASP ASN GLU THR TRP LEU ASN ASP PHE PRO ILE SEQRES 28 B 379 LYS GLY ARG THR ASN TYR PRO LEU LEU PHE ASP ARG ASN SEQRES 29 B 379 GLN LYS PRO LYS PRO ALA TYR PHE ARG LEU LEU ASP LEU SEQRES 30 B 379 LYS LYS HET GOL A 401 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL C3 H8 O3 FORMUL 4 HOH *160(H2 O) HELIX 1 1 GLY A 34 TYR A 39 1 6 HELIX 2 2 ALA A 50 THR A 55 1 6 HELIX 3 3 MET A 56 GLU A 58 5 3 HELIX 4 4 LYS A 59 PHE A 70 1 12 HELIX 5 5 LYS A 80 LYS A 85 1 6 HELIX 6 6 PRO A 86 LYS A 89 5 4 HELIX 7 7 HIS A 92 HIS A 106 1 15 HELIX 8 8 PRO A 122 LEU A 127 5 6 HELIX 9 9 SER A 135 TYR A 154 1 20 HELIX 10 10 SER A 177 GLY A 184 1 8 HELIX 11 11 ASP A 186 ASP A 199 1 14 HELIX 12 12 SER A 213 GLN A 230 1 18 HELIX 13 13 SER A 249 ASP A 262 1 14 HELIX 14 14 PRO A 306 HIS A 327 1 22 HELIX 15 15 ALA A 340 ASP A 348 5 9 HELIX 16 16 LYS A 368 LEU A 377 1 10 HELIX 17 17 ILE B 35 TYR B 39 1 5 HELIX 18 18 ALA B 50 MET B 56 1 7 HELIX 19 19 LYS B 59 PHE B 70 1 12 HELIX 20 20 LYS B 80 LYS B 85 1 6 HELIX 21 21 PRO B 86 LYS B 89 5 4 HELIX 22 22 TRP B 93 HIS B 106 1 14 HELIX 23 23 PRO B 122 LEU B 127 5 6 HELIX 24 24 SER B 135 TYR B 154 1 20 HELIX 25 25 SER B 177 GLY B 184 1 8 HELIX 26 26 ASP B 186 ASP B 199 1 14 HELIX 27 27 SER B 213 GLN B 230 1 18 HELIX 28 28 SER B 249 GLY B 264 1 16 HELIX 29 29 PRO B 284 VAL B 288 5 5 HELIX 30 30 LYS B 295 ASP B 299 5 5 HELIX 31 31 PRO B 306 HIS B 327 1 22 HELIX 32 32 THR B 344 ASP B 348 5 5 HELIX 33 33 LYS B 368 ASP B 376 1 9 SHEET 1 A 8 VAL A 116 TRP A 117 0 SHEET 2 A 8 ALA A 160 ASN A 165 1 O VAL A 163 N VAL A 116 SHEET 3 A 8 TYR A 109 GLY A 112 1 N GLY A 112 O ALA A 160 SHEET 4 A 8 ALA A 72 PRO A 75 1 N ILE A 73 O VAL A 111 SHEET 5 A 8 ARG A 44 VAL A 49 1 N VAL A 49 O THR A 74 SHEET 6 A 8 ILE A 331 LEU A 336 1 O VAL A 334 N ARG A 44 SHEET 7 A 8 ARG A 266 ASP A 275 1 N ILE A 269 O ARG A 333 SHEET 8 A 8 HIS A 242 ALA A 244 1 N LEU A 243 O ASP A 275 SHEET 1 B 6 VAL A 116 TRP A 117 0 SHEET 2 B 6 ALA A 160 ASN A 165 1 O VAL A 163 N VAL A 116 SHEET 3 B 6 HIS A 203 ASP A 208 1 O ASN A 207 N VAL A 164 SHEET 4 B 6 GLY A 236 MET A 239 1 O GLY A 238 N TYR A 206 SHEET 5 B 6 ARG A 266 ASP A 275 1 O HIS A 268 N MET A 239 SHEET 6 B 6 HIS A 242 ALA A 244 1 N LEU A 243 O ASP A 275 SHEET 1 C 2 VAL A 168 GLU A 169 0 SHEET 2 C 2 SER A 173 TRP A 174 -1 O SER A 173 N GLU A 169 SHEET 1 D10 HIS B 242 ALA B 244 0 SHEET 2 D10 ARG B 266 ASP B 275 1 O ASP B 275 N LEU B 243 SHEET 3 D10 ILE B 331 LEU B 336 1 O THR B 335 N LEU B 272 SHEET 4 D10 ARG B 44 VAL B 49 1 N ARG B 44 O VAL B 334 SHEET 5 D10 ALA B 72 PRO B 75 1 O THR B 74 N VAL B 49 SHEET 6 D10 TYR B 109 GLY B 112 1 O VAL B 111 N ILE B 73 SHEET 7 D10 ALA B 160 ASN B 165 1 O ALA B 160 N GLY B 112 SHEET 8 D10 HIS B 203 ASP B 208 1 O ILE B 205 N TRP B 161 SHEET 9 D10 GLY B 236 MET B 239 1 O GLY B 238 N TYR B 206 SHEET 10 D10 ARG B 266 ASP B 275 1 O HIS B 268 N MET B 239 SHEET 1 E 2 VAL B 168 GLU B 169 0 SHEET 2 E 2 SER B 173 TRP B 174 -1 O SER B 173 N GLU B 169 CISPEP 1 SER A 130 GLY A 131 0 3.45 CISPEP 2 GLY A 247 PRO A 248 0 -1.39 CISPEP 3 PHE A 349 PRO A 350 0 1.07 CISPEP 4 GLY B 247 PRO B 248 0 -1.55 CISPEP 5 PHE B 349 PRO B 350 0 0.13 SITE 1 AC1 6 LYS A 80 HIS A 113 TRP A 117 GLU A 166 SITE 2 AC1 6 GLU A 271 TRP A 337 CRYST1 41.877 116.442 82.811 90.00 99.85 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023879 0.000000 0.004147 0.00000 SCALE2 0.000000 0.008588 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012256 0.00000