HEADER LYASE 16-APR-13 4K6N TITLE CRYSTAL STRUCTURE OF YEAST 4-AMINO-4-DEOXYCHORISMATE LYASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMINODEOXYCHORISMATE LYASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 4-AMINO-4-DEOXYCHORISMATE LYASE, ADC LYASE, ADCL; COMPND 5 EC: 4.1.3.38; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 STRAIN: S288C; SOURCE 6 GENE: ABZ2, YMR289W; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS PLP-DEPENDENT FOLD TYPE IV ENZYME, 4-AMINO-4-DEOXYCHORISMATE, 4- KEYWDS 2 AMINOBENZOATE(PABA), PYRUVATE, PLP, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.-N.DAI,C.-B.CHI,K.ZHOU,W.CHENG,Y.-L.JIANG,Y.-M.REN,Y.CHEN,C.-Z.ZHOU REVDAT 2 16-OCT-13 4K6N 1 JRNL REVDAT 1 10-JUL-13 4K6N 0 JRNL AUTH Y.-N.DAI,C.-B.CHI,K.ZHOU,W.CHENG,Y.-L.JIANG,Y.-M.REN,K.RUAN, JRNL AUTH 2 Y.CHEN,C.-Z.ZHOU JRNL TITL STRUCTURE AND CATALYTIC MECHANISM OF YEAST JRNL TITL 2 4-AMINO-4-DEOXYCHORISMATE LYASE JRNL REF J.BIOL.CHEM. V. 288 22985 2013 JRNL REFN ISSN 0021-9258 JRNL PMID 23818518 JRNL DOI 10.1074/JBC.M113.480335 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.79 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 33471 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1765 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2235 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.33 REMARK 3 BIN R VALUE (WORKING SET) : 0.2020 REMARK 3 BIN FREE R VALUE SET COUNT : 103 REMARK 3 BIN FREE R VALUE : 0.2260 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2815 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 260 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.41000 REMARK 3 B22 (A**2) : -0.39000 REMARK 3 B33 (A**2) : 0.79000 REMARK 3 B12 (A**2) : -0.00000 REMARK 3 B13 (A**2) : -0.00000 REMARK 3 B23 (A**2) : -0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.128 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.119 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.073 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.786 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2877 ; 0.010 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3884 ; 1.259 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 351 ; 6.027 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 134 ;38.580 ;24.104 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 534 ;12.848 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;11.698 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 439 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2132 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 23 A 374 REMARK 3 ORIGIN FOR THE GROUP (A): -21.9982 27.4282 -20.7569 REMARK 3 T TENSOR REMARK 3 T11: 0.0266 T22: 0.0230 REMARK 3 T33: 0.0104 T12: -0.0009 REMARK 3 T13: -0.0139 T23: -0.0039 REMARK 3 L TENSOR REMARK 3 L11: 0.4593 L22: 0.5718 REMARK 3 L33: 0.5381 L12: 0.1561 REMARK 3 L13: -0.0306 L23: -0.2747 REMARK 3 S TENSOR REMARK 3 S11: 0.0080 S12: -0.0288 S13: 0.0122 REMARK 3 S21: -0.0742 S22: 0.0413 S23: 0.0178 REMARK 3 S31: 0.0843 S32: -0.0597 S33: -0.0493 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4K6N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-APR-13. REMARK 100 THE RCSB ID CODE IS RCSB078957. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97838 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35258 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : 0.07900 REMARK 200 FOR THE DATA SET : 20.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : 0.42200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20%(W/V) POLYETHYLENE GLYCOL REMARK 280 MONOMETHYL ETHER 5000, 0.1M BIS-TRIS, PH 6.2, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 289.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.00200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 43.00200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 45.48300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 56.94650 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 45.48300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 56.94650 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 43.00200 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 45.48300 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 56.94650 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 43.00200 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 45.48300 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 56.94650 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -8 REMARK 465 GLY A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 LEU A 3 REMARK 465 MET A 4 REMARK 465 ASP A 5 REMARK 465 ASN A 6 REMARK 465 TRP A 7 REMARK 465 LYS A 8 REMARK 465 THR A 9 REMARK 465 ASP A 10 REMARK 465 MET A 11 REMARK 465 GLU A 12 REMARK 465 SER A 13 REMARK 465 TYR A 14 REMARK 465 ASP A 15 REMARK 465 GLU A 16 REMARK 465 GLY A 17 REMARK 465 GLY A 18 REMARK 465 LEU A 19 REMARK 465 VAL A 20 REMARK 465 ALA A 21 REMARK 465 ASN A 22 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP A 211 O HOH A 713 6455 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 24 64.41 -100.51 REMARK 500 VAL A 80 160.23 54.30 REMARK 500 SER A 82 51.50 -91.07 REMARK 500 ASP A 85 -43.10 114.01 REMARK 500 GLN A 106 25.98 -78.81 REMARK 500 SER A 141 18.82 -143.12 REMARK 500 MET A 296 -63.55 -106.68 REMARK 500 GLU A 297 -178.36 -177.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLP A 500 DBREF 4K6N A 1 374 UNP Q03266 PABC_YEAST 1 374 SEQADV 4K6N MET A -8 UNP Q03266 EXPRESSION TAG SEQADV 4K6N GLY A -7 UNP Q03266 EXPRESSION TAG SEQADV 4K6N HIS A -6 UNP Q03266 EXPRESSION TAG SEQADV 4K6N HIS A -5 UNP Q03266 EXPRESSION TAG SEQADV 4K6N HIS A -4 UNP Q03266 EXPRESSION TAG SEQADV 4K6N HIS A -3 UNP Q03266 EXPRESSION TAG SEQADV 4K6N HIS A -2 UNP Q03266 EXPRESSION TAG SEQADV 4K6N HIS A -1 UNP Q03266 EXPRESSION TAG SEQADV 4K6N MET A 0 UNP Q03266 EXPRESSION TAG SEQRES 1 A 383 MET GLY HIS HIS HIS HIS HIS HIS MET MET SER LEU MET SEQRES 2 A 383 ASP ASN TRP LYS THR ASP MET GLU SER TYR ASP GLU GLY SEQRES 3 A 383 GLY LEU VAL ALA ASN PRO ASN PHE GLU VAL LEU ALA THR SEQRES 4 A 383 PHE ARG TYR ASP PRO GLY PHE ALA ARG GLN SER ALA SER SEQRES 5 A 383 LYS LYS GLU ILE PHE GLU THR PRO ASP PRO ARG LEU GLY SEQRES 6 A 383 LEU ARG ASP GLU ASP ILE ARG GLN GLN ILE ILE ASN GLU SEQRES 7 A 383 ASP TYR SER SER TYR LEU ARG VAL ARG GLU VAL ASN SER SEQRES 8 A 383 GLY GLY ASP LEU LEU GLU ASN ILE GLN HIS PRO ASP ALA SEQRES 9 A 383 TRP LYS HIS ASP CYS LYS THR ILE VAL CYS GLN ARG VAL SEQRES 10 A 383 GLU ASP MET LEU GLN VAL ILE TYR GLU ARG PHE PHE LEU SEQRES 11 A 383 LEU ASP GLU GLN TYR GLN ARG ILE ARG ILE ALA LEU SER SEQRES 12 A 383 TYR PHE LYS ILE ASP PHE SER THR SER LEU ASN ASP LEU SEQRES 13 A 383 LEU LYS LEU LEU VAL GLU ASN LEU ILE ASN CYS LYS GLU SEQRES 14 A 383 GLY ASN SER GLU TYR HIS GLU LYS ILE GLN LYS MET ILE SEQRES 15 A 383 ASN GLU ARG GLN CYS TYR LYS MET ARG VAL LEU VAL SER SEQRES 16 A 383 LYS THR GLY ASP ILE ARG ILE GLU ALA ILE PRO MET PRO SEQRES 17 A 383 MET GLU PRO ILE LEU LYS LEU THR THR ASP TYR ASP SER SEQRES 18 A 383 VAL SER THR TYR PHE ILE LYS THR MET LEU ASN GLY PHE SEQRES 19 A 383 LEU ILE ASP SER THR ILE ASN TRP ASP VAL VAL VAL SER SEQRES 20 A 383 SER GLU PRO LEU ASN ALA SER ALA PHE THR SER PHE LYS SEQRES 21 A 383 THR THR SER ARG ASP HIS TYR ALA ARG ALA ARG VAL ARG SEQRES 22 A 383 MET GLN THR ALA ILE ASN ASN LEU ARG GLY SER GLU PRO SEQRES 23 A 383 THR SER SER VAL SER GLN CYS GLU ILE LEU PHE SER ASN SEQRES 24 A 383 LYS SER GLY LEU LEU MET GLU GLY SER ILE THR ASN VAL SEQRES 25 A 383 ALA VAL ILE GLN LYS ASP PRO ASN GLY SER LYS LYS TYR SEQRES 26 A 383 VAL THR PRO ARG LEU ALA THR GLY CYS LEU CYS GLY THR SEQRES 27 A 383 MET ARG HIS TYR LEU LEU ARG LEU GLY LEU ILE GLU GLU SEQRES 28 A 383 GLY ASP ILE ASP ILE GLY SER LEU THR VAL GLY ASN GLU SEQRES 29 A 383 VAL LEU LEU PHE ASN GLY VAL MET GLY CYS ILE LYS GLY SEQRES 30 A 383 THR VAL LYS THR LYS TYR HET PLP A 500 15 HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETSYN PLP VITAMIN B6 PHOSPHATE FORMUL 2 PLP C8 H10 N O6 P FORMUL 3 HOH *260(H2 O) HELIX 1 1 ASP A 34 ALA A 38 5 5 HELIX 2 2 ASP A 52 GLY A 56 5 5 HELIX 3 3 ASP A 59 ASN A 68 1 10 HELIX 4 4 TYR A 71 ARG A 76 5 6 HELIX 5 5 ASP A 85 GLN A 91 1 7 HELIX 6 6 HIS A 92 TRP A 96 5 5 HELIX 7 7 ARG A 107 PHE A 119 1 13 HELIX 8 8 LEU A 121 PHE A 136 1 16 HELIX 9 9 SER A 143 ASN A 157 1 15 HELIX 10 10 GLU A 164 GLU A 175 1 12 HELIX 11 11 GLU A 201 THR A 208 1 8 HELIX 12 12 ASP A 209 ASP A 211 5 3 HELIX 13 13 SER A 212 LEU A 222 1 11 HELIX 14 14 ASN A 223 LEU A 226 5 4 HELIX 15 15 SER A 245 PHE A 250 1 6 HELIX 16 16 ARG A 255 GLY A 274 1 20 HELIX 17 17 LEU A 321 GLY A 324 5 4 HELIX 18 18 GLY A 328 LEU A 337 1 10 HELIX 19 19 ASP A 346 LEU A 350 5 5 SHEET 1 A 3 VAL A 27 TYR A 33 0 SHEET 2 A 3 CYS A 178 VAL A 185 -1 O VAL A 183 N ALA A 29 SHEET 3 A 3 ILE A 191 MET A 198 -1 O ILE A 196 N LYS A 180 SHEET 1 B 3 ARG A 39 GLN A 40 0 SHEET 2 B 3 ILE A 47 THR A 50 -1 O GLU A 49 N ARG A 39 SHEET 3 B 3 CYS A 100 ILE A 103 -1 O THR A 102 N PHE A 48 SHEET 1 C 8 LEU A 295 GLY A 298 0 SHEET 2 C 8 CYS A 284 SER A 289 -1 N PHE A 288 O MET A 296 SHEET 3 C 8 ASN A 232 VAL A 237 1 N VAL A 236 O LEU A 287 SHEET 4 C 8 GLY A 364 LYS A 373 1 O LYS A 371 N VAL A 235 SHEET 5 C 8 GLU A 355 ASN A 360 -1 N LEU A 358 O ILE A 366 SHEET 6 C 8 ASN A 302 ASP A 309 -1 N ALA A 304 O LEU A 357 SHEET 7 C 8 SER A 313 PRO A 319 -1 O VAL A 317 N VAL A 305 SHEET 8 C 8 GLU A 341 GLY A 343 1 O GLU A 341 N THR A 318 LINK NZ LYS A 251 C4A PLP A 500 1555 1555 1.48 CISPEP 1 PRO A 310 ASN A 311 0 3.01 SITE 1 AC1 19 ARG A 128 LYS A 251 ARG A 255 TYR A 258 SITE 2 AC1 19 GLU A 297 GLY A 298 SER A 299 THR A 301 SITE 3 AC1 19 ASN A 302 LEU A 326 GLY A 328 THR A 329 SITE 4 AC1 19 MET A 330 ASN A 360 GLY A 361 HOH A 601 SITE 5 AC1 19 HOH A 602 HOH A 603 HOH A 604 CRYST1 90.966 113.893 86.004 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010993 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008780 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011627 0.00000