HEADER OXIDOREDUCTASE 21-APR-13 4K9Z TITLE CRYSTAL STRUCTURE OF A PUTATIVE THIOL-DISULFIDE OXIDOREDUCTASE FROM TITLE 2 BACTEROIDES VULGATUS (TARGET NYSGRC-011676), SPACE GROUP P6222 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE THIOL-DISULFIDE OXIDOREDUCTASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 299-455; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES VULGATUS; SOURCE 3 ORGANISM_TAXID: 435590; SOURCE 4 STRAIN: ATCC 8482; SOURCE 5 GENE: BVU_2222; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS PUTATIVE DISULFIDE OXIDOREDUCTASE, NYSGRC, STRUCTURAL GENOMICS, NEW KEYWDS 2 YORK STRUCTURAL GENOMICS RESEARCH CONSORTIUM, PSI-BIOLOGY, KEYWDS 3 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.W.VETTING,Y.PATSKOVSKY,R.TORO,R.BHOSLE,B.HILLERICH,A.GIZZI, AUTHOR 2 S.GARFORTH,A.KAR,M.K.CHAN,J.LAFLUER,H.PATEL,B.MATIKAINEN,S.CHAMALA, AUTHOR 3 S.LIM,A.CELIKGIL,G.VILLEGAS,B.EVANS,J.LOVE,A.FISER,K.KHAFIZOV, AUTHOR 4 R.D.SEIDEL,J.B.BONANNO,R.N.ARMSTRONG,S.C.ALMO,NEW YORK STRUCTURAL AUTHOR 5 GENOMICS RESEARCH CONSORTIUM (NYSGRC) REVDAT 4 20-SEP-23 4K9Z 1 REMARK SEQADV REVDAT 3 11-APR-18 4K9Z 1 REMARK REVDAT 2 04-APR-18 4K9Z 1 REMARK REVDAT 1 10-JUL-13 4K9Z 0 JRNL AUTH M.W.VETTING,Y.PATSKOVSKY,R.TORO,R.BHOSLE,B.HILLERICH, JRNL AUTH 2 A.GIZZI,S.GARFORTH,A.KAR,M.K.CHAN,J.LAFLUER,H.PATEL, JRNL AUTH 3 B.MATIKAINEN,S.CHAMALA,S.LIM,A.CELIKGIL,G.VILLEGAS,B.EVANS, JRNL AUTH 4 J.LOVE,A.FISER,K.KHAFIZOV,R.D.SEIDEL,J.B.BONANNO, JRNL AUTH 5 R.N.ARMSTRONG,S.C.ALMO, JRNL AUTH 6 NEW YORK STRUCTURAL GENOMICS RESEARCH CONSORTIUM (NYSGRC) JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE THIOL-DISULFIDE JRNL TITL 2 OXIDOREDUCTASE FROM BACTEROIDES VULGATUS (TARGET JRNL TITL 3 NYSGRC-011676), SPACE GROUP P6222 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 9.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 18454 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 945 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 9.9770 - 3.4038 1.00 2700 128 0.1879 0.2214 REMARK 3 2 3.4038 - 2.7197 1.00 2547 138 0.2135 0.2455 REMARK 3 3 2.7197 - 2.3812 1.00 2506 126 0.2102 0.2918 REMARK 3 4 2.3812 - 2.1660 1.00 2462 133 0.2000 0.2650 REMARK 3 5 2.1660 - 2.0121 1.00 2461 134 0.1974 0.2654 REMARK 3 6 2.0121 - 1.8943 1.00 2410 148 0.2087 0.2628 REMARK 3 7 1.8943 - 1.8000 1.00 2423 138 0.2164 0.2644 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1185 REMARK 3 ANGLE : 1.206 1616 REMARK 3 CHIRALITY : 0.078 177 REMARK 3 PLANARITY : 0.006 204 REMARK 3 DIHEDRAL : 13.836 431 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 18 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): 61.9230 -13.2831 184.9934 REMARK 3 T TENSOR REMARK 3 T11: 0.4547 T22: 0.1921 REMARK 3 T33: 0.2199 T12: 0.0305 REMARK 3 T13: -0.2719 T23: 0.0282 REMARK 3 L TENSOR REMARK 3 L11: 0.8471 L22: 0.2637 REMARK 3 L33: 0.5395 L12: -0.1010 REMARK 3 L13: -0.4925 L23: 0.2815 REMARK 3 S TENSOR REMARK 3 S11: 0.4426 S12: 0.2905 S13: 0.1926 REMARK 3 S21: -0.2600 S22: 0.2709 S23: 0.1667 REMARK 3 S31: 0.1692 S32: -0.1154 S33: 0.2793 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 39 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): 61.5562 -20.4551 187.7789 REMARK 3 T TENSOR REMARK 3 T11: 0.1764 T22: 0.2286 REMARK 3 T33: 0.1065 T12: 0.0806 REMARK 3 T13: -0.2747 T23: 0.0711 REMARK 3 L TENSOR REMARK 3 L11: 0.2335 L22: 0.3470 REMARK 3 L33: 0.0216 L12: 0.2338 REMARK 3 L13: 0.0287 L23: 0.0068 REMARK 3 S TENSOR REMARK 3 S11: -0.0697 S12: 0.2964 S13: 0.3173 REMARK 3 S21: -0.4235 S22: 0.0057 S23: 0.4899 REMARK 3 S31: 0.0116 S32: -0.1028 S33: -0.0174 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 60 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): 62.5786 -28.2718 198.0307 REMARK 3 T TENSOR REMARK 3 T11: 0.1825 T22: 0.1922 REMARK 3 T33: 0.2117 T12: -0.0264 REMARK 3 T13: -0.0387 T23: 0.0345 REMARK 3 L TENSOR REMARK 3 L11: 0.0066 L22: 0.0193 REMARK 3 L33: 0.0112 L12: 0.0094 REMARK 3 L13: -0.0013 L23: 0.0197 REMARK 3 S TENSOR REMARK 3 S11: 0.0988 S12: -0.0302 S13: -0.0256 REMARK 3 S21: -0.0224 S22: 0.0074 S23: 0.2441 REMARK 3 S31: 0.2273 S32: 0.0531 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 76 THROUGH 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): 58.3144 -22.5821 190.9962 REMARK 3 T TENSOR REMARK 3 T11: 0.2098 T22: 0.2227 REMARK 3 T33: 0.2488 T12: -0.0056 REMARK 3 T13: -0.1332 T23: -0.0340 REMARK 3 L TENSOR REMARK 3 L11: 0.2394 L22: 0.3610 REMARK 3 L33: 0.1232 L12: 0.2086 REMARK 3 L13: -0.1168 L23: -0.0215 REMARK 3 S TENSOR REMARK 3 S11: 0.1028 S12: 0.0130 S13: 0.0639 REMARK 3 S21: -0.2687 S22: -0.0469 S23: 0.5538 REMARK 3 S31: 0.1462 S32: 0.0396 S33: 0.0643 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 92 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): 65.4188 -34.6893 182.0078 REMARK 3 T TENSOR REMARK 3 T11: 0.6809 T22: 0.1349 REMARK 3 T33: 0.0548 T12: 0.0356 REMARK 3 T13: -0.4008 T23: -0.3309 REMARK 3 L TENSOR REMARK 3 L11: 0.0781 L22: 0.0141 REMARK 3 L33: 0.0536 L12: 0.0321 REMARK 3 L13: 0.0600 L23: 0.0189 REMARK 3 S TENSOR REMARK 3 S11: -0.0010 S12: 0.0980 S13: -0.0802 REMARK 3 S21: 0.0015 S22: -0.0527 S23: -0.0222 REMARK 3 S31: 0.0328 S32: -0.0568 S33: -0.0408 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 102 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): 58.0679 -33.4769 190.5536 REMARK 3 T TENSOR REMARK 3 T11: 0.2412 T22: 0.2334 REMARK 3 T33: 0.5203 T12: -0.0782 REMARK 3 T13: -0.1617 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 0.0892 L22: 0.0844 REMARK 3 L33: 0.3084 L12: -0.0633 REMARK 3 L13: -0.1452 L23: 0.0501 REMARK 3 S TENSOR REMARK 3 S11: -0.0586 S12: -0.0241 S13: -0.0709 REMARK 3 S21: 0.0154 S22: -0.0499 S23: 0.0023 REMARK 3 S31: 0.0925 S32: -0.0153 S33: -0.0311 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 108 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): 66.4904 -18.6426 181.8687 REMARK 3 T TENSOR REMARK 3 T11: 0.4929 T22: 0.1550 REMARK 3 T33: 0.0641 T12: 0.0052 REMARK 3 T13: -0.2206 T23: -0.0162 REMARK 3 L TENSOR REMARK 3 L11: 0.0197 L22: 0.0108 REMARK 3 L33: 0.0179 L12: -0.0131 REMARK 3 L13: 0.0193 L23: -0.0080 REMARK 3 S TENSOR REMARK 3 S11: 0.0764 S12: 0.0902 S13: 0.0782 REMARK 3 S21: -0.1089 S22: -0.0141 S23: -0.0127 REMARK 3 S31: -0.0729 S32: -0.0608 S33: 0.0418 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 119 THROUGH 136 ) REMARK 3 ORIGIN FOR THE GROUP (A): 65.2106 -13.3437 191.5883 REMARK 3 T TENSOR REMARK 3 T11: 0.1696 T22: 0.1132 REMARK 3 T33: 0.3076 T12: 0.0574 REMARK 3 T13: -0.0381 T23: 0.0105 REMARK 3 L TENSOR REMARK 3 L11: 0.0078 L22: 0.0301 REMARK 3 L33: 0.1022 L12: 0.0116 REMARK 3 L13: -0.0175 L23: 0.0167 REMARK 3 S TENSOR REMARK 3 S11: -0.0394 S12: -0.1099 S13: 0.3780 REMARK 3 S21: -0.1683 S22: 0.0621 S23: 0.2355 REMARK 3 S31: -0.1682 S32: -0.0215 S33: -0.0106 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 137 THROUGH 158 ) REMARK 3 ORIGIN FOR THE GROUP (A): 62.4591 -16.1140 201.8385 REMARK 3 T TENSOR REMARK 3 T11: 0.1511 T22: 0.2401 REMARK 3 T33: 0.2130 T12: -0.0378 REMARK 3 T13: 0.0136 T23: -0.0812 REMARK 3 L TENSOR REMARK 3 L11: 0.0292 L22: 0.0514 REMARK 3 L33: 0.0917 L12: 0.0226 REMARK 3 L13: -0.0362 L23: -0.0404 REMARK 3 S TENSOR REMARK 3 S11: 0.0742 S12: -0.2663 S13: 0.2517 REMARK 3 S21: 0.1588 S22: -0.1631 S23: 0.1028 REMARK 3 S31: 0.0585 S32: -0.0325 S33: -0.0137 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4K9Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-APR-13. REMARK 100 THE DEPOSITION ID IS D_1000079077. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18641 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 57.963 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 21.30 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : 0.07600 REMARK 200 FOR THE DATA SET : 24.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 22.30 REMARK 200 R MERGE FOR SHELL (I) : 0.72100 REMARK 200 R SYM FOR SHELL (I) : 0.72100 REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 2LJA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN (10 MM HEPES, PH 7.8, 150 MM REMARK 280 NACL, 10% GLYCEROL); RESERVOIR (2.0 M AMMONIUM SULFATE; REMARK 280 CRYOPROTECTION (20% GLYCEROL), TEMPERATURE 298K, VAPOR DIFFUSION, REMARK 280 SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 115.92667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 57.96333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 115.92667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 57.96333 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 115.92667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 57.96333 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 115.92667 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 57.96333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 152.40000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -52.79291 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 -0.866025 0.000000 91.44000 REMARK 350 BIOMT2 3 -0.866025 0.500000 0.000000 52.79291 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 405.74333 REMARK 350 BIOMT1 4 0.500000 0.866025 0.000000 60.96000 REMARK 350 BIOMT2 4 0.866025 -0.500000 0.000000 -105.58582 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 405.74333 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 LEU A 3 REMARK 465 ASN A 4 REMARK 465 ALA A 5 REMARK 465 ASP A 6 REMARK 465 PHE A 7 REMARK 465 ALA A 8 REMARK 465 THR A 9 REMARK 465 GLU A 10 REMARK 465 ILE A 11 REMARK 465 GLU A 12 REMARK 465 GLY A 13 REMARK 465 LYS A 14 REMARK 465 ILE A 15 REMARK 465 VAL A 16 REMARK 465 GLN A 17 REMARK 465 ASN A 159 REMARK 465 LYS A 160 REMARK 465 GLU A 161 REMARK 465 GLY A 162 REMARK 465 HIS A 163 REMARK 465 HIS A 164 REMARK 465 HIS A 165 REMARK 465 HIS A 166 REMARK 465 HIS A 167 REMARK 465 HIS A 168 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 31 O HOH A 379 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 19 -3.78 -142.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGRC-011676 RELATED DB: TARGETTRACK REMARK 900 RELATED ID: 4KA0 RELATED DB: PDB DBREF 4K9Z A 4 160 UNP A6L2G8 A6L2G8_BACV8 299 455 SEQADV 4K9Z MET A 1 UNP A6L2G8 EXPRESSION TAG SEQADV 4K9Z SER A 2 UNP A6L2G8 EXPRESSION TAG SEQADV 4K9Z LEU A 3 UNP A6L2G8 EXPRESSION TAG SEQADV 4K9Z GLU A 161 UNP A6L2G8 EXPRESSION TAG SEQADV 4K9Z GLY A 162 UNP A6L2G8 EXPRESSION TAG SEQADV 4K9Z HIS A 163 UNP A6L2G8 EXPRESSION TAG SEQADV 4K9Z HIS A 164 UNP A6L2G8 EXPRESSION TAG SEQADV 4K9Z HIS A 165 UNP A6L2G8 EXPRESSION TAG SEQADV 4K9Z HIS A 166 UNP A6L2G8 EXPRESSION TAG SEQADV 4K9Z HIS A 167 UNP A6L2G8 EXPRESSION TAG SEQADV 4K9Z HIS A 168 UNP A6L2G8 EXPRESSION TAG SEQRES 1 A 168 MET SER LEU ASN ALA ASP PHE ALA THR GLU ILE GLU GLY SEQRES 2 A 168 LYS ILE VAL GLN ALA SER LYS LEU LEU PRO GLY GLN PRO SEQRES 3 A 168 ALA ILE ASP PHE GLU MET LEU ASP VAL GLU GLY ASN VAL SEQRES 4 A 168 LYS HIS LEU ALA ASP PHE LYS GLY LYS VAL ILE TYR ILE SEQRES 5 A 168 ASP LEU TRP ALA THR TRP CYS GLY PRO CYS ILE GLN GLU SEQRES 6 A 168 SER PRO ALA PHE GLU ALA LEU GLY LYS LYS TYR VAL GLY SEQRES 7 A 168 LYS ASP ILE VAL PHE LEU PRO VAL SER THR ASP THR THR SEQRES 8 A 168 THR LYS PRO TRP LEU ARG TYR LEU ASP GLY HIS LYS LYS SEQRES 9 A 168 GLU LEU THR GLN TYR HIS SER ASN ASP VAL ALA LEU LYS SEQRES 10 A 168 GLU SER TRP ALA ILE MET TYR ILE PRO ARG PHE ILE LEU SEQRES 11 A 168 ILE ASP LYS ASP PHE ASN ILE VAL ASN ALA TYR ALA PRO SEQRES 12 A 168 ARG PRO SER SER GLU GLU ILE GLY THR LEU ILE ASP SER SEQRES 13 A 168 VAL LEU ASN LYS GLU GLY HIS HIS HIS HIS HIS HIS HET CL A 201 1 HETNAM CL CHLORIDE ION FORMUL 2 CL CL 1- FORMUL 3 HOH *90(H2 O) HELIX 1 1 ALA A 43 LYS A 46 5 4 HELIX 2 2 CYS A 59 GLU A 65 1 7 HELIX 3 3 GLU A 65 TYR A 76 1 12 HELIX 4 4 THR A 91 HIS A 102 1 12 HELIX 5 5 ASP A 113 SER A 119 1 7 HELIX 6 6 GLU A 149 LEU A 158 1 10 SHEET 1 A 2 GLU A 31 LEU A 33 0 SHEET 2 A 2 VAL A 39 HIS A 41 -1 O LYS A 40 N MET A 32 SHEET 1 B 5 TYR A 109 HIS A 110 0 SHEET 2 B 5 ILE A 81 SER A 87 1 N SER A 87 O TYR A 109 SHEET 3 B 5 VAL A 49 TRP A 55 1 N ASP A 53 O VAL A 86 SHEET 4 B 5 ARG A 127 ILE A 131 -1 O ILE A 129 N ILE A 52 SHEET 5 B 5 ILE A 137 ASN A 139 -1 O VAL A 138 N LEU A 130 SSBOND 1 CYS A 59 CYS A 62 1555 1555 2.08 CISPEP 1 ILE A 125 PRO A 126 0 -2.29 SITE 1 AC1 6 ALA A 121 ILE A 122 MET A 123 TYR A 124 SITE 2 AC1 6 ARG A 127 GLU A 148 CRYST1 60.960 60.960 173.890 90.00 90.00 120.00 P 62 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016404 0.009471 0.000000 0.00000 SCALE2 0.000000 0.018942 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005751 0.00000