HEADER TRANSLATION 23-APR-13 4KAW TITLE CRYSTAL STRUCTURE OF RIBOSOME RECYCLING FACTOR MUTANT R39G FROM TITLE 2 MYCOBACTERIUM TUBERCULOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBOSOME-RECYCLING FACTOR; COMPND 3 CHAIN: X; COMPND 4 SYNONYM: RRF, RIBOSOME-RELEASING FACTOR; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: FRR, MT2949, MTCY274.13C, RV2882C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PTRC KEYWDS RIBOSOME RECYCLING, TRANSLATION, EUBACTERIA, DISASSEMBLY, POST- KEYWDS 2 TERMINATION COMPLEX, RIBOSOME, ELONGATION FACTOR G, BACTERIAL KEYWDS 3 CYTOSOL EXPDTA X-RAY DIFFRACTION AUTHOR M.SELVARAJ,A.GOVINDAN,A.SESHADRI,B.DUBEY,U.VARSHNEY,M.VIJAYAN REVDAT 3 08-NOV-23 4KAW 1 REMARK SEQADV LINK REVDAT 2 09-OCT-19 4KAW 1 JRNL REMARK REVDAT 1 19-MAR-14 4KAW 0 JRNL AUTH M.SELVARAJ,A.GOVINDAN,A.SESHADRI,B.DUBEY,U.VARSHNEY, JRNL AUTH 2 M.VIJAYAN JRNL TITL MOLECULAR FLEXIBILITY OF MYCOBACTERIUM TUBERCULOSIS RIBOSOME JRNL TITL 2 RECYCLING FACTOR AND ITS FUNCTIONAL CONSEQUENCES: AN JRNL TITL 3 EXPLORATION INVOLVING MUTANTS. JRNL REF J.BIOSCI. V. 38 845 2013 JRNL REFN ISSN 0250-4774 JRNL PMID 24296887 JRNL DOI 10.1007/S12038-013-9381-0 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.61 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 7138 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.236 REMARK 3 R VALUE (WORKING SET) : 0.235 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 342 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 540 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3290 REMARK 3 BIN FREE R VALUE SET COUNT : 21 REMARK 3 BIN FREE R VALUE : 0.3100 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1439 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 89 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.12 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.13000 REMARK 3 B22 (A**2) : -0.61000 REMARK 3 B33 (A**2) : 0.33000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -2.30000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.656 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.317 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.275 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 20.680 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.913 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.874 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1403 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1895 ; 1.069 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 182 ; 4.339 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 67 ;39.692 ;24.030 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 247 ;15.352 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;22.147 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 218 ; 0.060 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1065 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 2 X 29 REMARK 3 ORIGIN FOR THE GROUP (A): 28.3823 11.0452 34.0063 REMARK 3 T TENSOR REMARK 3 T11: 0.2256 T22: 0.3784 REMARK 3 T33: 0.2824 T12: 0.0462 REMARK 3 T13: 0.0378 T23: 0.0090 REMARK 3 L TENSOR REMARK 3 L11: 13.2888 L22: 2.3049 REMARK 3 L33: 14.8625 L12: 5.3536 REMARK 3 L13: 13.9172 L23: 5.7826 REMARK 3 S TENSOR REMARK 3 S11: 0.0266 S12: 0.2003 S13: -0.4875 REMARK 3 S21: 0.0035 S22: 0.2917 S23: -0.1188 REMARK 3 S31: 0.0526 S32: 0.3966 S33: -0.3182 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 30 X 102 REMARK 3 ORIGIN FOR THE GROUP (A): 53.5356 9.3582 47.1738 REMARK 3 T TENSOR REMARK 3 T11: 0.0795 T22: 0.7431 REMARK 3 T33: 0.2599 T12: 0.0318 REMARK 3 T13: 0.0680 T23: -0.1596 REMARK 3 L TENSOR REMARK 3 L11: 1.9466 L22: 6.5707 REMARK 3 L33: 10.4181 L12: -2.4614 REMARK 3 L13: -3.9517 L23: 2.1571 REMARK 3 S TENSOR REMARK 3 S11: -0.3009 S12: 0.0299 S13: -0.0076 REMARK 3 S21: 0.4304 S22: 0.1594 S23: -0.2479 REMARK 3 S31: 0.5118 S32: -0.0420 S33: 0.1415 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 103 X 148 REMARK 3 ORIGIN FOR THE GROUP (A): 27.3429 20.8895 35.0329 REMARK 3 T TENSOR REMARK 3 T11: 0.2515 T22: 0.3294 REMARK 3 T33: 0.2977 T12: -0.0148 REMARK 3 T13: 0.0490 T23: -0.0164 REMARK 3 L TENSOR REMARK 3 L11: 6.0292 L22: 0.3092 REMARK 3 L33: 13.3096 L12: 0.9413 REMARK 3 L13: 8.8025 L23: 1.4058 REMARK 3 S TENSOR REMARK 3 S11: -0.2312 S12: 0.1750 S13: 0.1240 REMARK 3 S21: -0.1226 S22: 0.1352 S23: -0.0284 REMARK 3 S31: -0.4705 S32: 0.2145 S33: 0.0961 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 149 X 184 REMARK 3 ORIGIN FOR THE GROUP (A): 19.7522 15.1141 37.8531 REMARK 3 T TENSOR REMARK 3 T11: 0.2557 T22: 0.3423 REMARK 3 T33: 0.3257 T12: -0.0233 REMARK 3 T13: 0.1153 T23: -0.0469 REMARK 3 L TENSOR REMARK 3 L11: 11.3855 L22: 0.3491 REMARK 3 L33: 12.8066 L12: 1.7761 REMARK 3 L13: 11.5992 L23: 1.9596 REMARK 3 S TENSOR REMARK 3 S11: 0.3370 S12: -0.6937 S13: 0.0648 REMARK 3 S21: 0.1466 S22: -0.2117 S23: 0.0909 REMARK 3 S31: 0.6372 S32: -0.8991 S33: -0.1253 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4KAW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000079109. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-SEP-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54179 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : OSMIC MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7487 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 51.640 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.14400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.14400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 7.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1WQG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 6% POLYETHYLENE GLYCOL 4000, 20MM TRIS REMARK 280 -HCL (PH 7.8), 0.6MM CADMIUM ACETATE, 5% POLYETHYLENE GLYCOL 400, REMARK 280 UNDER OIL USING MICROBATCH PLATES, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 16.79500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET X 1 REMARK 465 VAL X 185 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU X 4 CD OE1 OE2 REMARK 480 LYS X 15 CD CE NZ REMARK 480 ILE X 51 CG1 CG2 CD1 REMARK 480 ILE X 57 CG1 CG2 CD1 REMARK 480 VAL X 59 CG1 CG2 REMARK 480 GLU X 61 CD OE1 OE2 REMARK 480 LYS X 68 CG CD CE NZ REMARK 480 ILE X 98 CB CG1 CG2 CD1 REMARK 480 ARG X 99 CB CG CD NE CZ NH1 NH2 REMARK 480 GLU X 107 CG CD OE1 OE2 REMARK 480 LYS X 134 CD CE NZ REMARK 480 GLU X 137 CD OE1 OE2 REMARK 480 LYS X 144 CD CE NZ REMARK 480 GLU X 150 CG CD OE1 OE2 REMARK 480 LYS X 176 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG X 31 81.90 77.30 REMARK 500 PRO X 60 -101.18 -67.48 REMARK 500 ARG X 63 55.88 -116.11 REMARK 500 ASP X 94 54.78 -112.47 REMARK 500 LEU X 183 48.78 -104.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD X 201 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU X 10 OE2 REMARK 620 2 GLU X 14 OE1 97.1 REMARK 620 3 HOH X 319 O 76.4 86.6 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD X 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1WQG RELATED DB: PDB REMARK 900 RELATED ID: 1WQF RELATED DB: PDB REMARK 900 RELATED ID: 1WQH RELATED DB: PDB REMARK 900 RELATED ID: 4KB2 RELATED DB: PDB REMARK 900 RELATED ID: 4KB4 RELATED DB: PDB REMARK 900 RELATED ID: 4KC6 RELATED DB: PDB REMARK 900 RELATED ID: 4KDD RELATED DB: PDB DBREF 4KAW X 1 185 UNP P66734 RRF_MYCTU 1 185 SEQADV 4KAW GLY X 39 UNP P66734 ARG 39 ENGINEERED MUTATION SEQRES 1 X 185 MET ILE ASP GLU ALA LEU PHE ASP ALA GLU GLU LYS MET SEQRES 2 X 185 GLU LYS ALA VAL ALA VAL ALA ARG ASP ASP LEU SER THR SEQRES 3 X 185 ILE ARG THR GLY ARG ALA ASN PRO GLY MET PHE SER GLY SEQRES 4 X 185 ILE THR ILE ASP TYR TYR GLY ALA ALA THR PRO ILE THR SEQRES 5 X 185 GLN LEU ALA SER ILE ASN VAL PRO GLU ALA ARG LEU VAL SEQRES 6 X 185 VAL ILE LYS PRO TYR GLU ALA ASN GLN LEU ARG ALA ILE SEQRES 7 X 185 GLU THR ALA ILE ARG ASN SER ASP LEU GLY VAL ASN PRO SEQRES 8 X 185 THR ASN ASP GLY ALA LEU ILE ARG VAL ALA VAL PRO GLN SEQRES 9 X 185 LEU THR GLU GLU ARG ARG ARG GLU LEU VAL LYS GLN ALA SEQRES 10 X 185 LYS HIS LYS GLY GLU GLU ALA LYS VAL SER VAL ARG ASN SEQRES 11 X 185 ILE ARG ARG LYS ALA MET GLU GLU LEU HIS ARG ILE ARG SEQRES 12 X 185 LYS GLU GLY GLU ALA GLY GLU ASP GLU VAL GLY ARG ALA SEQRES 13 X 185 GLU LYS ASP LEU ASP LYS THR THR HIS GLN TYR VAL THR SEQRES 14 X 185 GLN ILE ASP GLU LEU VAL LYS HIS LYS GLU GLY GLU LEU SEQRES 15 X 185 LEU GLU VAL HET CD X 201 1 HETNAM CD CADMIUM ION FORMUL 2 CD CD 2+ FORMUL 3 HOH *89(H2 O) HELIX 1 1 ILE X 2 SER X 25 1 24 HELIX 2 2 ASN X 33 SER X 38 5 6 HELIX 3 3 ILE X 51 LEU X 54 1 4 HELIX 4 4 GLU X 71 ASN X 73 5 3 HELIX 5 5 GLN X 74 ASN X 84 1 11 HELIX 6 6 THR X 106 GLU X 145 1 40 HELIX 7 7 GLY X 149 LEU X 183 1 35 SHEET 1 A 2 THR X 41 TYR X 44 0 SHEET 2 A 2 ALA X 47 PRO X 50 -1 O THR X 49 N ILE X 42 SHEET 1 B 4 ALA X 55 ASN X 58 0 SHEET 2 B 4 LEU X 64 PRO X 69 -1 O VAL X 66 N ASN X 58 SHEET 3 B 4 ILE X 98 ALA X 101 -1 O VAL X 100 N VAL X 65 SHEET 4 B 4 ASN X 90 ASN X 93 -1 N THR X 92 O ARG X 99 LINK OE2 GLU X 10 CD CD X 201 1555 1555 2.29 LINK OE1 GLU X 14 CD CD X 201 1555 1555 2.20 LINK CD CD X 201 O HOH X 319 1555 1555 2.69 SITE 1 AC1 3 GLU X 10 GLU X 14 HOH X 319 CRYST1 56.360 33.590 60.890 90.00 112.84 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017743 0.000000 0.007473 0.00000 SCALE2 0.000000 0.029771 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017820 0.00000