HEADER TRANSLATION 24-APR-13 4KC6 TITLE CRYSTAL STRUCTURE OF C-TERMINAL DELETION MUTANT OF RIBOSOME RECYCLING TITLE 2 FACTOR FROM MYCOBACTERIUM TUBERCULOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBOSOME-RECYCLING FACTOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RRF, RIBOSOME-RELEASING FACTOR; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: FRR, MT2949, MTCY274.13C, RV2882C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET11D KEYWDS RIBOSOME RECYCLING, TRANSLATION, EUBACTERIA, POST-TERMINATION KEYWDS 2 COMPLEX, ELONGATION FACTOR G, BACTERIAL CYTOSOL EXPDTA X-RAY DIFFRACTION AUTHOR M.SELVARAJ,A.GOVINDAN,A.SESHADRI,B.DUBEY,U.VARSHNEY,M.VIJAYAN REVDAT 3 08-NOV-23 4KC6 1 REMARK SEQADV REVDAT 2 09-OCT-19 4KC6 1 JRNL REVDAT 1 12-MAR-14 4KC6 0 JRNL AUTH M.SELVARAJ,A.GOVINDAN,A.SESHADRI,B.DUBEY,U.VARSHNEY, JRNL AUTH 2 M.VIJAYAN JRNL TITL MOLECULAR FLEXIBILITY OF MYCOBACTERIUM TUBERCULOSIS RIBOSOME JRNL TITL 2 RECYCLING FACTOR AND ITS FUNCTIONAL CONSEQUENCES: AN JRNL TITL 3 EXPLORATION INVOLVING MUTANTS. JRNL REF J.BIOSCI. V. 38 845 2013 JRNL REFN ISSN 0250-4774 JRNL PMID 24296887 JRNL DOI 10.1007/S12038-013-9381-0 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.21 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 6622 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.254 REMARK 3 R VALUE (WORKING SET) : 0.251 REMARK 3 FREE R VALUE : 0.304 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 358 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 479 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3990 REMARK 3 BIN FREE R VALUE SET COUNT : 20 REMARK 3 BIN FREE R VALUE : 0.3150 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1344 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 131 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.04000 REMARK 3 B22 (A**2) : -3.85000 REMARK 3 B33 (A**2) : 7.89000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.882 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.351 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.334 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 28.575 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.927 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.885 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1356 ; 0.006 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1832 ; 1.108 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 177 ; 4.657 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 61 ;45.854 ;23.934 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 242 ;18.368 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;13.131 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 217 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1014 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 29 REMARK 3 ORIGIN FOR THE GROUP (A): -24.5271 -3.0044 4.4673 REMARK 3 T TENSOR REMARK 3 T11: 0.2478 T22: 0.2239 REMARK 3 T33: 0.0061 T12: -0.0016 REMARK 3 T13: 0.0362 T23: 0.0056 REMARK 3 L TENSOR REMARK 3 L11: 0.1765 L22: 18.0890 REMARK 3 L33: 3.9493 L12: -0.3150 REMARK 3 L13: 0.0278 L23: 7.8827 REMARK 3 S TENSOR REMARK 3 S11: 0.0698 S12: -0.0423 S13: 0.0048 REMARK 3 S21: -0.2756 S22: -0.0965 S23: 0.0499 REMARK 3 S31: -0.1047 S32: -0.0429 S33: 0.0267 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 103 A 148 REMARK 3 ORIGIN FOR THE GROUP (A): -15.1823 -3.3801 7.6640 REMARK 3 T TENSOR REMARK 3 T11: 0.2776 T22: 0.2253 REMARK 3 T33: 0.0870 T12: -0.0255 REMARK 3 T13: 0.0457 T23: -0.0176 REMARK 3 L TENSOR REMARK 3 L11: 0.4948 L22: 11.9544 REMARK 3 L33: 1.3227 L12: 1.5007 REMARK 3 L13: 0.4434 L23: 3.7227 REMARK 3 S TENSOR REMARK 3 S11: 0.2463 S12: -0.1013 S13: -0.0151 REMARK 3 S21: -0.0301 S22: -0.2536 S23: -0.3232 REMARK 3 S31: 0.0206 S32: -0.1212 S33: 0.0074 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 149 A 179 REMARK 3 ORIGIN FOR THE GROUP (A): -17.0284 -5.1494 -3.1325 REMARK 3 T TENSOR REMARK 3 T11: 0.2747 T22: 0.2442 REMARK 3 T33: 0.0672 T12: -0.0079 REMARK 3 T13: 0.0086 T23: 0.0364 REMARK 3 L TENSOR REMARK 3 L11: 1.0713 L22: 12.3825 REMARK 3 L33: 2.2260 L12: -0.4449 REMARK 3 L13: -0.2683 L23: 5.0950 REMARK 3 S TENSOR REMARK 3 S11: 0.0903 S12: -0.0483 S13: 0.0773 REMARK 3 S21: -0.3501 S22: -0.0937 S23: -0.1828 REMARK 3 S31: -0.1009 S32: -0.0038 S33: 0.0034 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 30 A 102 REMARK 3 ORIGIN FOR THE GROUP (A): -33.0279 15.6317 20.5494 REMARK 3 T TENSOR REMARK 3 T11: 0.3079 T22: 0.2477 REMARK 3 T33: 0.0368 T12: 0.0221 REMARK 3 T13: 0.0157 T23: 0.0251 REMARK 3 L TENSOR REMARK 3 L11: 2.1633 L22: 3.2228 REMARK 3 L33: 0.8520 L12: 0.9202 REMARK 3 L13: -0.5472 L23: -0.3913 REMARK 3 S TENSOR REMARK 3 S11: -0.0144 S12: 0.0870 S13: 0.1539 REMARK 3 S21: 0.1491 S22: -0.0074 S23: -0.1736 REMARK 3 S31: 0.0701 S32: 0.0328 S33: 0.0219 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4KC6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000079153. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU ULTRAX 18 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.514 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7009 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 42.240 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.12400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : 0.12400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 8.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1WQG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 6% POLYETHYLENE GLYCOL 4000, 0.1M TRIS REMARK 280 HCL, 0.6MM CADMIUM ACETATE, 5% POLYETHYLENE GLYCOL 400, PH 7.8, REMARK 280 UNDER OIL IN MICROBATCH PLATES, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.49500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.07000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.39500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 42.07000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.49500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 24.39500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 21 CG CD NE CZ NH1 NH2 REMARK 470 THR A 26 OG1 CG2 REMARK 470 ARG A 28 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 76 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 86 CG OD1 OD2 REMARK 470 PRO A 91 CG CD REMARK 470 PRO A 103 CG CD REMARK 470 GLN A 104 CG CD OE1 NE2 REMARK 470 GLU A 107 CG CD OE1 OE2 REMARK 470 GLU A 112 CG CD OE1 OE2 REMARK 470 VAL A 114 CG1 CG2 REMARK 470 LYS A 115 CG CD CE NZ REMARK 470 HIS A 119 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 134 CG CD CE NZ REMARK 470 GLU A 145 CG CD OE1 OE2 REMARK 470 ASP A 151 CG OD1 OD2 REMARK 470 GLU A 179 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 26 8.24 -58.82 REMARK 500 ARG A 28 67.86 -113.24 REMARK 500 ASP A 43 105.30 -36.16 REMARK 500 ALA A 48 99.63 -63.14 REMARK 500 ASN A 90 58.89 -117.38 REMARK 500 PRO A 91 139.72 -30.44 REMARK 500 VAL A 102 -91.44 -43.18 REMARK 500 PRO A 103 -32.85 155.58 REMARK 500 GLN A 104 -21.25 96.78 REMARK 500 LEU A 105 174.26 74.56 REMARK 500 GLU A 107 89.01 -66.23 REMARK 500 GLU A 108 -44.40 153.21 REMARK 500 ALA A 148 147.55 -174.78 REMARK 500 GLU A 173 35.84 -83.62 REMARK 500 LEU A 174 -30.70 -131.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1WQG RELATED DB: PDB REMARK 900 RELATED ID: 1WQF RELATED DB: PDB REMARK 900 RELATED ID: 1WQH RELATED DB: PDB REMARK 900 RELATED ID: 4KAW RELATED DB: PDB REMARK 900 RELATED ID: 4KB2 RELATED DB: PDB REMARK 900 RELATED ID: 4KB4 RELATED DB: PDB REMARK 900 RELATED ID: 4KDD RELATED DB: PDB DBREF 4KC6 A 1 179 UNP P66734 RRF_MYCTU 1 185 SEQADV 4KC6 A UNP P66734 GLY 180 DELETION SEQADV 4KC6 A UNP P66734 GLU 181 DELETION SEQADV 4KC6 A UNP P66734 LEU 182 DELETION SEQADV 4KC6 A UNP P66734 LEU 183 DELETION SEQADV 4KC6 A UNP P66734 GLU 184 DELETION SEQADV 4KC6 A UNP P66734 VAL 185 DELETION SEQRES 1 A 179 MET ILE ASP GLU ALA LEU PHE ASP ALA GLU GLU LYS MET SEQRES 2 A 179 GLU LYS ALA VAL ALA VAL ALA ARG ASP ASP LEU SER THR SEQRES 3 A 179 ILE ARG THR GLY ARG ALA ASN PRO GLY MET PHE SER ARG SEQRES 4 A 179 ILE THR ILE ASP TYR TYR GLY ALA ALA THR PRO ILE THR SEQRES 5 A 179 GLN LEU ALA SER ILE ASN VAL PRO GLU ALA ARG LEU VAL SEQRES 6 A 179 VAL ILE LYS PRO TYR GLU ALA ASN GLN LEU ARG ALA ILE SEQRES 7 A 179 GLU THR ALA ILE ARG ASN SER ASP LEU GLY VAL ASN PRO SEQRES 8 A 179 THR ASN ASP GLY ALA LEU ILE ARG VAL ALA VAL PRO GLN SEQRES 9 A 179 LEU THR GLU GLU ARG ARG ARG GLU LEU VAL LYS GLN ALA SEQRES 10 A 179 LYS HIS LYS GLY GLU GLU ALA LYS VAL SER VAL ARG ASN SEQRES 11 A 179 ILE ARG ARG LYS ALA MET GLU GLU LEU HIS ARG ILE ARG SEQRES 12 A 179 LYS GLU GLY GLU ALA GLY GLU ASP GLU VAL GLY ARG ALA SEQRES 13 A 179 GLU LYS ASP LEU ASP LYS THR THR HIS GLN TYR VAL THR SEQRES 14 A 179 GLN ILE ASP GLU LEU VAL LYS HIS LYS GLU HET CD A 201 1 HET CD A 202 1 HETNAM CD CADMIUM ION FORMUL 2 CD 2(CD 2+) FORMUL 4 HOH *131(H2 O) HELIX 1 1 ILE A 2 THR A 26 1 25 HELIX 2 2 ASN A 33 ARG A 39 5 7 HELIX 3 3 GLU A 71 ASN A 73 5 3 HELIX 4 4 GLN A 74 ASN A 84 1 11 HELIX 5 5 ARG A 110 GLY A 146 1 37 HELIX 6 6 GLY A 149 LYS A 176 1 28 SHEET 1 A 2 THR A 41 TYR A 44 0 SHEET 2 A 2 ALA A 47 PRO A 50 -1 O ALA A 47 N TYR A 44 SHEET 1 B 3 ALA A 55 ASN A 58 0 SHEET 2 B 3 VAL A 65 PRO A 69 -1 O VAL A 66 N ASN A 58 SHEET 3 B 3 ILE A 98 VAL A 100 -1 O VAL A 100 N VAL A 65 LINK OE2 GLU A 4 CD CD A 201 1555 1555 2.28 LINK NE2 HIS A 140 CD CD A 202 1555 1555 2.50 SITE 1 AC1 4 GLU A 4 ASP A 8 ASP A 161 HIS A 165 SITE 1 AC2 5 GLU A 11 GLU A 14 MET A 136 HIS A 140 SITE 2 AC2 5 GLU A 157 CRYST1 40.990 48.790 84.140 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024396 0.000000 0.000000 0.00000 SCALE2 0.000000 0.020496 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011885 0.00000