HEADER VIRAL PROTEIN 25-APR-13 4KDM TITLE CRYSTAL STRUCTURE OF THE HEMAGGLUTININ OF FERRET-TRANSMISSIBLE H5N1 TITLE 2 VIRUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMAGGLUTININ; COMPND 3 CHAIN: A, C, E; COMPND 4 FRAGMENT: RESIDUES 17-337; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: HEMAGGLUTININ; COMPND 9 CHAIN: B, D, F; COMPND 10 FRAGMENT: RESIDUES 347-521; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 3 ORGANISM_TAXID: 284218; SOURCE 4 STRAIN: (A/VIET NAM/1203/2004(H5N1)); SOURCE 5 GENE: HA; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 10 ORGANISM_TAXID: 284218; SOURCE 11 STRAIN: (A/VIET NAM/1203/2004(H5N1)); SOURCE 12 GENE: HA; SOURCE 13 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS HOMOTRIMER, VIRUS ATTACHMENT AND MEMBRANE FUSION, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR X.LU,Y.SHI,W.ZHANG,Y.ZHANG,J.QI,G.F.GAO REVDAT 4 29-JUL-20 4KDM 1 COMPND SOURCE REMARK SEQADV REVDAT 4 2 1 HETNAM LINK SITE ATOM REVDAT 3 29-OCT-14 4KDM 1 TITLE REVDAT 2 04-SEP-13 4KDM 1 JRNL REVDAT 1 24-JUL-13 4KDM 0 JRNL AUTH X.LU,Y.SHI,W.ZHANG,Y.ZHANG,J.QI,G.F.GAO JRNL TITL STRUCTURE AND RECEPTOR-BINDING PROPERTIES OF AN AIRBORNE JRNL TITL 2 TRANSMISSIBLE AVIAN INFLUENZA A VIRUS HEMAGGLUTININ H5 JRNL TITL 3 (VN1203MUT). JRNL REF PROTEIN CELL V. 4 502 2013 JRNL REFN ISSN 1674-800X JRNL PMID 23794001 JRNL DOI 10.1007/S13238-013-3906-Z REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.07 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 73934 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 3722 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.0693 - 7.4639 0.96 2536 146 0.1767 0.2045 REMARK 3 2 7.4639 - 5.9337 1.00 2638 131 0.2059 0.2178 REMARK 3 3 5.9337 - 5.1863 0.99 2572 153 0.1848 0.2427 REMARK 3 4 5.1863 - 4.7134 0.98 2557 154 0.1792 0.2352 REMARK 3 5 4.7134 - 4.3762 0.97 2567 131 0.1716 0.1843 REMARK 3 6 4.3762 - 4.1186 0.99 2599 136 0.1800 0.2453 REMARK 3 7 4.1186 - 3.9126 1.00 2620 123 0.1884 0.1705 REMARK 3 8 3.9126 - 3.7425 1.00 2611 136 0.2003 0.2099 REMARK 3 9 3.7425 - 3.5986 1.00 2637 129 0.2035 0.2119 REMARK 3 10 3.5986 - 3.4745 1.00 2578 146 0.2251 0.2752 REMARK 3 11 3.4745 - 3.3660 1.00 2621 148 0.2323 0.2864 REMARK 3 12 3.3660 - 3.2698 1.00 2630 125 0.2437 0.2950 REMARK 3 13 3.2698 - 3.1838 1.00 2586 138 0.2514 0.2961 REMARK 3 14 3.1838 - 3.1062 1.00 2613 164 0.2554 0.3069 REMARK 3 15 3.1062 - 3.0356 1.00 2576 155 0.2633 0.3030 REMARK 3 16 3.0356 - 2.9710 1.00 2602 138 0.2725 0.2930 REMARK 3 17 2.9710 - 2.9116 1.00 2604 145 0.2635 0.3381 REMARK 3 18 2.9116 - 2.8567 1.00 2611 140 0.2603 0.2971 REMARK 3 19 2.8567 - 2.8057 1.00 2620 136 0.2717 0.3168 REMARK 3 20 2.8057 - 2.7582 1.00 2611 125 0.2765 0.2930 REMARK 3 21 2.7582 - 2.7137 1.00 2651 138 0.2814 0.3653 REMARK 3 22 2.7137 - 2.6720 1.00 2586 102 0.2916 0.3629 REMARK 3 23 2.6720 - 2.6327 1.00 2657 129 0.2910 0.3406 REMARK 3 24 2.6327 - 2.5956 1.00 2620 132 0.2893 0.3043 REMARK 3 25 2.5956 - 2.5606 1.00 2508 151 0.3020 0.3312 REMARK 3 26 2.5606 - 2.5273 1.00 2678 147 0.3097 0.3800 REMARK 3 27 2.5273 - 2.4957 0.96 2523 124 0.3188 0.3911 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.790 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 12345 REMARK 3 ANGLE : 1.083 16683 REMARK 3 CHIRALITY : 0.081 1791 REMARK 3 PLANARITY : 0.004 2169 REMARK 3 DIHEDRAL : 19.075 4608 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 18 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 96 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.8444 28.6349 6.8499 REMARK 3 T TENSOR REMARK 3 T11: 0.4236 T22: 0.2020 REMARK 3 T33: 0.2694 T12: 0.0350 REMARK 3 T13: 0.0600 T23: 0.0107 REMARK 3 L TENSOR REMARK 3 L11: 0.1371 L22: 0.0572 REMARK 3 L33: 0.0167 L12: 0.0853 REMARK 3 L13: 0.0013 L23: 0.0056 REMARK 3 S TENSOR REMARK 3 S11: 0.0279 S12: -0.0143 S13: -0.0772 REMARK 3 S21: 0.2960 S22: -0.1108 S23: 0.2669 REMARK 3 S31: 0.0888 S32: 0.1006 S33: -0.0115 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 97 THROUGH 285 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.5468 65.2301 5.0239 REMARK 3 T TENSOR REMARK 3 T11: 0.2697 T22: 0.2318 REMARK 3 T33: 0.2034 T12: -0.0248 REMARK 3 T13: 0.0658 T23: 0.0128 REMARK 3 L TENSOR REMARK 3 L11: 0.3845 L22: 0.2326 REMARK 3 L33: 0.3561 L12: 0.0521 REMARK 3 L13: 0.1160 L23: 0.1561 REMARK 3 S TENSOR REMARK 3 S11: 0.1127 S12: 0.0202 S13: 0.0731 REMARK 3 S21: 0.1948 S22: -0.0884 S23: 0.0673 REMARK 3 S31: -0.0210 S32: 0.0073 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 286 THROUGH 325 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.6711 20.1212 0.2640 REMARK 3 T TENSOR REMARK 3 T11: 0.3360 T22: 0.2063 REMARK 3 T33: 0.3909 T12: 0.0238 REMARK 3 T13: 0.0281 T23: -0.0300 REMARK 3 L TENSOR REMARK 3 L11: 0.0051 L22: 0.0172 REMARK 3 L33: -0.0021 L12: -0.0039 REMARK 3 L13: 0.0049 L23: -0.0104 REMARK 3 S TENSOR REMARK 3 S11: 0.0228 S12: 0.0127 S13: -0.1212 REMARK 3 S21: 0.1566 S22: 0.0194 S23: 0.0298 REMARK 3 S31: 0.1473 S32: 0.0912 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 335 THROUGH 408 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.7553 2.9216 -1.7995 REMARK 3 T TENSOR REMARK 3 T11: 0.5487 T22: 0.2367 REMARK 3 T33: 0.3665 T12: 0.0789 REMARK 3 T13: -0.0457 T23: -0.0354 REMARK 3 L TENSOR REMARK 3 L11: 0.1285 L22: 0.0096 REMARK 3 L33: 0.1089 L12: -0.0076 REMARK 3 L13: -0.1330 L23: -0.0060 REMARK 3 S TENSOR REMARK 3 S11: -0.0653 S12: 0.0800 S13: -0.0498 REMARK 3 S21: 0.2214 S22: 0.0893 S23: 0.0527 REMARK 3 S31: 0.1559 S32: 0.0229 S33: 0.0038 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 409 THROUGH 509 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.5290 -8.0375 -8.3485 REMARK 3 T TENSOR REMARK 3 T11: 0.4126 T22: 0.2518 REMARK 3 T33: 0.3883 T12: 0.0938 REMARK 3 T13: -0.0502 T23: -0.0618 REMARK 3 L TENSOR REMARK 3 L11: 0.1731 L22: 0.0894 REMARK 3 L33: -0.0772 L12: 0.1259 REMARK 3 L13: -0.0183 L23: -0.0098 REMARK 3 S TENSOR REMARK 3 S11: 0.0318 S12: 0.0910 S13: -0.1372 REMARK 3 S21: 0.1775 S22: -0.0938 S23: 0.1130 REMARK 3 S31: 0.0054 S32: 0.0415 S33: -0.0001 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 4 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.0916 38.5459 -26.9025 REMARK 3 T TENSOR REMARK 3 T11: 0.2076 T22: 0.4062 REMARK 3 T33: 0.1697 T12: 0.1009 REMARK 3 T13: 0.0358 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 0.1894 L22: 0.0911 REMARK 3 L33: 0.2303 L12: -0.0079 REMARK 3 L13: -0.0013 L23: -0.1176 REMARK 3 S TENSOR REMARK 3 S11: -0.0468 S12: 0.2372 S13: -0.0561 REMARK 3 S21: 0.0041 S22: 0.0104 S23: -0.1900 REMARK 3 S31: 0.0442 S32: 0.2241 S33: -0.0001 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 120 THROUGH 270 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.6001 72.9203 -27.8707 REMARK 3 T TENSOR REMARK 3 T11: 0.2649 T22: 0.4415 REMARK 3 T33: 0.2526 T12: -0.0174 REMARK 3 T13: 0.0164 T23: 0.1125 REMARK 3 L TENSOR REMARK 3 L11: 0.4313 L22: 0.1064 REMARK 3 L33: 0.4311 L12: -0.1461 REMARK 3 L13: -0.0020 L23: 0.0283 REMARK 3 S TENSOR REMARK 3 S11: 0.0500 S12: 0.1505 S13: 0.3485 REMARK 3 S21: -0.1487 S22: 0.0861 S23: -0.0066 REMARK 3 S31: -0.2031 S32: 0.0393 S33: 0.0658 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 271 THROUGH 325 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.7986 28.7856 -24.7137 REMARK 3 T TENSOR REMARK 3 T11: 0.3813 T22: 0.4209 REMARK 3 T33: 0.3248 T12: 0.1013 REMARK 3 T13: 0.0020 T23: -0.0389 REMARK 3 L TENSOR REMARK 3 L11: 0.0473 L22: 0.0242 REMARK 3 L33: 0.0370 L12: -0.0336 REMARK 3 L13: -0.0473 L23: 0.0099 REMARK 3 S TENSOR REMARK 3 S11: -0.0135 S12: 0.1363 S13: -0.1084 REMARK 3 S21: -0.2039 S22: -0.0092 S23: -0.2545 REMARK 3 S31: 0.1537 S32: 0.2508 S33: 0.0003 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 335 THROUGH 356 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.0774 -6.3436 -22.4252 REMARK 3 T TENSOR REMARK 3 T11: 0.8862 T22: 0.6650 REMARK 3 T33: 0.7496 T12: 0.2445 REMARK 3 T13: 0.0327 T23: -0.1691 REMARK 3 L TENSOR REMARK 3 L11: 0.0025 L22: 0.0084 REMARK 3 L33: 0.0062 L12: -0.0011 REMARK 3 L13: 0.0035 L23: 0.0041 REMARK 3 S TENSOR REMARK 3 S11: 0.1147 S12: 0.0109 S13: -0.0306 REMARK 3 S21: -0.0031 S22: 0.0536 S23: -0.1155 REMARK 3 S31: 0.0142 S32: 0.0201 S33: -0.0000 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 357 THROUGH 466 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.4506 10.6138 -23.2870 REMARK 3 T TENSOR REMARK 3 T11: 0.4130 T22: 0.2552 REMARK 3 T33: 0.1568 T12: 0.1571 REMARK 3 T13: 0.0169 T23: -0.0957 REMARK 3 L TENSOR REMARK 3 L11: 0.1970 L22: 0.1229 REMARK 3 L33: 0.2469 L12: 0.0148 REMARK 3 L13: -0.0982 L23: -0.1725 REMARK 3 S TENSOR REMARK 3 S11: -0.0892 S12: 0.1190 S13: -0.0380 REMARK 3 S21: 0.0083 S22: -0.0535 S23: 0.0565 REMARK 3 S31: 0.2510 S32: 0.1435 S33: -0.2562 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 467 THROUGH 492 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.3934 -22.0255 -32.7056 REMARK 3 T TENSOR REMARK 3 T11: 1.2811 T22: 0.7137 REMARK 3 T33: 0.8835 T12: 0.3047 REMARK 3 T13: 0.2894 T23: -0.0700 REMARK 3 L TENSOR REMARK 3 L11: -0.0004 L22: 0.0111 REMARK 3 L33: 0.0050 L12: -0.0007 REMARK 3 L13: 0.0003 L23: 0.0088 REMARK 3 S TENSOR REMARK 3 S11: -0.0119 S12: 0.0253 S13: -0.0226 REMARK 3 S21: -0.0257 S22: -0.0448 S23: -0.0334 REMARK 3 S31: 0.0709 S32: -0.0013 S33: 0.0000 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 493 THROUGH 509 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.7721 -34.9382 -30.0822 REMARK 3 T TENSOR REMARK 3 T11: 1.4829 T22: 0.7843 REMARK 3 T33: 1.1627 T12: 0.0951 REMARK 3 T13: 0.1130 T23: -0.2888 REMARK 3 L TENSOR REMARK 3 L11: 0.0019 L22: 0.0086 REMARK 3 L33: 0.0010 L12: 0.0045 REMARK 3 L13: 0.0023 L23: 0.0036 REMARK 3 S TENSOR REMARK 3 S11: 0.0055 S12: -0.0452 S13: -0.0798 REMARK 3 S21: -0.0194 S22: 0.0573 S23: 0.0047 REMARK 3 S31: 0.0137 S32: 0.0053 S33: 0.0000 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 4 THROUGH 96 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.9527 27.8697 -28.2683 REMARK 3 T TENSOR REMARK 3 T11: 0.3862 T22: 0.4435 REMARK 3 T33: 0.4469 T12: 0.0220 REMARK 3 T13: -0.2177 T23: -0.1690 REMARK 3 L TENSOR REMARK 3 L11: 0.2206 L22: 0.2216 REMARK 3 L33: 0.3015 L12: 0.2228 REMARK 3 L13: -0.0765 L23: -0.1122 REMARK 3 S TENSOR REMARK 3 S11: 0.1746 S12: 0.3216 S13: -0.0850 REMARK 3 S21: -0.2058 S22: 0.0492 S23: 0.2799 REMARK 3 S31: 0.1591 S32: -0.1388 S33: 0.4111 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 97 THROUGH 270 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.6161 65.2013 -17.3903 REMARK 3 T TENSOR REMARK 3 T11: 0.0226 T22: 0.3344 REMARK 3 T33: 0.4406 T12: 0.0670 REMARK 3 T13: 0.0095 T23: 0.1211 REMARK 3 L TENSOR REMARK 3 L11: 0.3516 L22: 0.1672 REMARK 3 L33: 0.2511 L12: 0.0077 REMARK 3 L13: 0.1367 L23: 0.0269 REMARK 3 S TENSOR REMARK 3 S11: 0.0937 S12: 0.1746 S13: 0.2388 REMARK 3 S21: 0.0542 S22: -0.0532 S23: 0.2055 REMARK 3 S31: 0.0453 S32: -0.0900 S33: 0.0256 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 271 THROUGH 325 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.4137 23.8563 -27.0441 REMARK 3 T TENSOR REMARK 3 T11: 0.3631 T22: 0.4024 REMARK 3 T33: 0.4595 T12: 0.0086 REMARK 3 T13: -0.1428 T23: -0.1054 REMARK 3 L TENSOR REMARK 3 L11: 0.1286 L22: 0.0184 REMARK 3 L33: 0.1707 L12: 0.0340 REMARK 3 L13: -0.1009 L23: 0.0047 REMARK 3 S TENSOR REMARK 3 S11: 0.0719 S12: 0.0968 S13: -0.0961 REMARK 3 S21: -0.1869 S22: 0.0537 S23: 0.1009 REMARK 3 S31: 0.1071 S32: 0.0109 S33: 0.0588 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 335 THROUGH 371 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.8888 -15.2407 -29.2931 REMARK 3 T TENSOR REMARK 3 T11: 0.9298 T22: 0.6027 REMARK 3 T33: 0.8493 T12: 0.0930 REMARK 3 T13: -0.2970 T23: -0.3027 REMARK 3 L TENSOR REMARK 3 L11: 0.0016 L22: -0.0006 REMARK 3 L33: 0.0064 L12: 0.0085 REMARK 3 L13: 0.0005 L23: 0.0012 REMARK 3 S TENSOR REMARK 3 S11: -0.0623 S12: 0.0155 S13: 0.0295 REMARK 3 S21: -0.0420 S22: -0.0936 S23: 0.0668 REMARK 3 S31: 0.0596 S32: 0.1023 S33: -0.0000 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 372 THROUGH 466 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.7018 12.1650 -20.2271 REMARK 3 T TENSOR REMARK 3 T11: 0.3709 T22: 0.2886 REMARK 3 T33: 0.2707 T12: 0.0282 REMARK 3 T13: -0.1642 T23: -0.1921 REMARK 3 L TENSOR REMARK 3 L11: 0.3565 L22: 0.2283 REMARK 3 L33: 0.3337 L12: 0.2904 REMARK 3 L13: 0.0335 L23: 0.0795 REMARK 3 S TENSOR REMARK 3 S11: 0.1151 S12: 0.3830 S13: -0.0611 REMARK 3 S21: -0.0396 S22: 0.0432 S23: 0.2632 REMARK 3 S31: 0.1782 S32: -0.0148 S33: 0.2834 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 467 THROUGH 509 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.8239 -31.6464 -22.0632 REMARK 3 T TENSOR REMARK 3 T11: 1.6260 T22: 0.6206 REMARK 3 T33: 1.2607 T12: -0.0919 REMARK 3 T13: -0.3223 T23: -0.1439 REMARK 3 L TENSOR REMARK 3 L11: 0.0016 L22: 0.0045 REMARK 3 L33: -0.0003 L12: 0.0017 REMARK 3 L13: -0.0063 L23: -0.0014 REMARK 3 S TENSOR REMARK 3 S11: 0.0468 S12: 0.0039 S13: -0.1963 REMARK 3 S21: 0.0372 S22: -0.0814 S23: -0.0656 REMARK 3 S31: 0.1472 S32: 0.0883 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4KDM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-APR-13. REMARK 100 THE DEPOSITION ID IS D_1000079205. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 73995 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.496 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CACODYLATE PH6.0 15% W/V REMARK 280 PEG 4,000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 121.92400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 33770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 61030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -139.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O3 NAG G 1 O HOH A 753 1.88 REMARK 500 O HOH C 735 O HOH C 742 1.89 REMARK 500 OD1 ASP E 58 O HOH E 726 1.90 REMARK 500 OE1 GLU E 38 O HOH E 725 1.92 REMARK 500 ND2 ASN E 27 C2 NAG E 601 1.92 REMARK 500 NE ARG E 212 O HOH E 703 1.92 REMARK 500 ND2 ASN A 197 O HOH A 712 1.92 REMARK 500 O ALA C 138 O HOH C 705 1.94 REMARK 500 OE1 GLU A 38 O HOH A 727 1.98 REMARK 500 O ALA E 318 O HOH E 730 1.98 REMARK 500 OG1 THR A 199 O HOH A 752 1.99 REMARK 500 O HOH E 710 O HOH E 733 2.02 REMARK 500 OE1 GLU C 38 O HOH C 734 2.03 REMARK 500 O GLU B 419 O HOH B 608 2.04 REMARK 500 OE2 GLU F 403 O HOH F 604 2.05 REMARK 500 O HOH A 733 O HOH A 737 2.08 REMARK 500 O GLY D 347 O HOH D 607 2.08 REMARK 500 NH2 ARG D 461 O GLU F 466 2.10 REMARK 500 O GLU C 130 O HOH C 703 2.11 REMARK 500 O HOH A 735 O HOH A 742 2.13 REMARK 500 NH1 ARG A 212 O HOH A 732 2.14 REMARK 500 NH1 ARG E 57 OD1 ASP E 72 2.15 REMARK 500 OG SER E 145 O HOH E 732 2.16 REMARK 500 N LEU A 179 O HOH A 703 2.16 REMARK 500 O MET D 393 O HOH D 617 2.17 REMARK 500 OE1 GLU B 431 O HOH B 605 2.17 REMARK 500 OE2 GLU D 403 O HOH D 612 2.18 REMARK 500 OE2 GLU C 73 OH TYR C 141 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O TYR C 141 NZ LYS E 144 1655 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 460 CB - CA - C ANGL. DEV. = 13.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 57 -78.58 -70.94 REMARK 500 ASP A 92 -98.73 -120.83 REMARK 500 TYR A 141 -69.06 -101.59 REMARK 500 SER A 146 -149.72 -148.41 REMARK 500 ASP A 158 -133.10 57.09 REMARK 500 ASN A 240 -0.46 74.30 REMARK 500 GLU A 255 -52.64 -122.38 REMARK 500 SER A 266 -131.67 -140.14 REMARK 500 ASN A 277 91.60 22.74 REMARK 500 ASN B 362 -167.05 -125.23 REMARK 500 ARG B 461 -125.48 60.99 REMARK 500 ASP B 479 -168.15 -69.54 REMARK 500 SER B 508 103.52 -56.60 REMARK 500 ARG C 57 -73.70 -73.13 REMARK 500 ASP C 92 -99.00 -121.15 REMARK 500 TYR C 141 -74.02 -102.80 REMARK 500 SER C 146 -147.51 -147.24 REMARK 500 ASP C 158 -130.77 50.56 REMARK 500 GLU C 255 -52.50 -121.36 REMARK 500 SER C 266 -130.34 -140.35 REMARK 500 ASN C 277 91.68 22.96 REMARK 500 GLU D 345 78.03 -100.58 REMARK 500 ASN D 362 -166.50 -122.94 REMARK 500 ARG D 461 -128.33 53.17 REMARK 500 ASP D 479 -173.72 -68.27 REMARK 500 SER D 508 103.03 -55.15 REMARK 500 ARG E 57 -76.51 -69.77 REMARK 500 ASP E 92 -102.03 -122.51 REMARK 500 TYR E 141 -73.32 -99.97 REMARK 500 SER E 146 -149.91 -147.80 REMARK 500 ASP E 158 -123.41 56.31 REMARK 500 ASN E 240 -1.20 74.21 REMARK 500 GLU E 255 -52.73 -122.11 REMARK 500 SER E 266 -131.53 -140.11 REMARK 500 ASN E 277 92.65 23.46 REMARK 500 ARG E 314 136.69 -170.20 REMARK 500 GLU F 345 79.67 -100.05 REMARK 500 ASN F 362 -163.85 -126.96 REMARK 500 ARG F 461 -129.87 53.83 REMARK 500 ASP F 479 -170.49 -67.44 REMARK 500 SER F 508 102.35 -57.94 REMARK 500 REMARK 500 REMARK: NULL DBREF 4KDM A 5 325 UNP Q6DQ33 Q6DQ33_9INFA 17 337 DBREF 4KDM B 335 509 UNP Q6DQ33 Q6DQ33_9INFA 347 521 DBREF 4KDM C 5 325 UNP Q6DQ33 Q6DQ33_9INFA 17 337 DBREF 4KDM D 335 509 UNP Q6DQ33 Q6DQ33_9INFA 347 521 DBREF 4KDM E 5 325 UNP Q6DQ33 Q6DQ33_9INFA 17 337 DBREF 4KDM F 335 509 UNP Q6DQ33 Q6DQ33_9INFA 347 521 SEQADV 4KDM GLN A 4 UNP Q6DQ33 EXPRESSION TAG SEQADV 4KDM ASP A 158 UNP Q6DQ33 ASN 170 ENGINEERED MUTATION SEQADV 4KDM LYS A 224 UNP Q6DQ33 ASN 236 ENGINEERED MUTATION SEQADV 4KDM LEU A 226 UNP Q6DQ33 GLN 238 ENGINEERED MUTATION SEQADV 4KDM ILE A 319 UNP Q6DQ33 THR 331 ENGINEERED MUTATION SEQADV 4KDM GLN C 4 UNP Q6DQ33 EXPRESSION TAG SEQADV 4KDM ASP C 158 UNP Q6DQ33 ASN 170 ENGINEERED MUTATION SEQADV 4KDM LYS C 224 UNP Q6DQ33 ASN 236 ENGINEERED MUTATION SEQADV 4KDM LEU C 226 UNP Q6DQ33 GLN 238 ENGINEERED MUTATION SEQADV 4KDM ILE C 319 UNP Q6DQ33 THR 331 ENGINEERED MUTATION SEQADV 4KDM GLN E 4 UNP Q6DQ33 EXPRESSION TAG SEQADV 4KDM ASP E 158 UNP Q6DQ33 ASN 170 ENGINEERED MUTATION SEQADV 4KDM LYS E 224 UNP Q6DQ33 ASN 236 ENGINEERED MUTATION SEQADV 4KDM LEU E 226 UNP Q6DQ33 GLN 238 ENGINEERED MUTATION SEQADV 4KDM ILE E 319 UNP Q6DQ33 THR 331 ENGINEERED MUTATION SEQRES 1 A 322 GLN ASP GLN ILE CYS ILE GLY TYR HIS ALA ASN ASN SER SEQRES 2 A 322 THR GLU GLN VAL ASP THR ILE MET GLU LYS ASN VAL THR SEQRES 3 A 322 VAL THR HIS ALA GLN ASP ILE LEU GLU LYS LYS HIS ASN SEQRES 4 A 322 GLY LYS LEU CYS ASP LEU ASP GLY VAL LYS PRO LEU ILE SEQRES 5 A 322 LEU ARG ASP CYS SER VAL ALA GLY TRP LEU LEU GLY ASN SEQRES 6 A 322 PRO MET CYS ASP GLU PHE ILE ASN VAL PRO GLU TRP SER SEQRES 7 A 322 TYR ILE VAL GLU LYS ALA ASN PRO VAL ASN ASP LEU CYS SEQRES 8 A 322 TYR PRO GLY ASP PHE ASN ASP TYR GLU GLU LEU LYS HIS SEQRES 9 A 322 LEU LEU SER ARG ILE ASN HIS PHE GLU LYS ILE GLN ILE SEQRES 10 A 322 ILE PRO LYS SER SER TRP SER SER HIS GLU ALA SER LEU SEQRES 11 A 322 GLY VAL SER SER ALA CYS PRO TYR GLN GLY LYS SER SER SEQRES 12 A 322 PHE PHE ARG ASN VAL VAL TRP LEU ILE LYS LYS ASP SER SEQRES 13 A 322 THR TYR PRO THR ILE LYS ARG SER TYR ASN ASN THR ASN SEQRES 14 A 322 GLN GLU ASP LEU LEU VAL LEU TRP GLY ILE HIS HIS PRO SEQRES 15 A 322 ASN ASP ALA ALA GLU GLN THR LYS LEU TYR GLN ASN PRO SEQRES 16 A 322 THR THR TYR ILE SER VAL GLY THR SER THR LEU ASN GLN SEQRES 17 A 322 ARG LEU VAL PRO ARG ILE ALA THR ARG SER LYS VAL LYS SEQRES 18 A 322 GLY LEU SER GLY ARG MET GLU PHE PHE TRP THR ILE LEU SEQRES 19 A 322 LYS PRO ASN ASP ALA ILE ASN PHE GLU SER ASN GLY ASN SEQRES 20 A 322 PHE ILE ALA PRO GLU TYR ALA TYR LYS ILE VAL LYS LYS SEQRES 21 A 322 GLY ASP SER THR ILE MET LYS SER GLU LEU GLU TYR GLY SEQRES 22 A 322 ASN CYS ASN THR LYS CYS GLN THR PRO MET GLY ALA ILE SEQRES 23 A 322 ASN SER SER MET PRO PHE HIS ASN ILE HIS PRO LEU THR SEQRES 24 A 322 ILE GLY GLU CYS PRO LYS TYR VAL LYS SER ASN ARG LEU SEQRES 25 A 322 VAL LEU ALA ILE GLY LEU ARG ASN SER PRO SEQRES 1 B 175 GLY LEU PHE GLY ALA ILE ALA GLY PHE ILE GLU GLY GLY SEQRES 2 B 175 TRP GLN GLY MET VAL ASP GLY TRP TYR GLY TYR HIS HIS SEQRES 3 B 175 SER ASN GLU GLN GLY SER GLY TYR ALA ALA ASP LYS GLU SEQRES 4 B 175 SER THR GLN LYS ALA ILE ASP GLY VAL THR ASN LYS VAL SEQRES 5 B 175 ASN SER ILE ILE ASP LYS MET ASN THR GLN PHE GLU ALA SEQRES 6 B 175 VAL GLY ARG GLU PHE ASN ASN LEU GLU ARG ARG ILE GLU SEQRES 7 B 175 ASN LEU ASN LYS LYS MET GLU ASP GLY PHE LEU ASP VAL SEQRES 8 B 175 TRP THR TYR ASN ALA GLU LEU LEU VAL LEU MET GLU ASN SEQRES 9 B 175 GLU ARG THR LEU ASP PHE HIS ASP SER ASN VAL LYS ASN SEQRES 10 B 175 LEU TYR ASP LYS VAL ARG LEU GLN LEU ARG ASP ASN ALA SEQRES 11 B 175 LYS GLU LEU GLY ASN GLY CYS PHE GLU PHE TYR HIS LYS SEQRES 12 B 175 CYS ASP ASN GLU CYS MET GLU SER VAL ARG ASN GLY THR SEQRES 13 B 175 TYR ASP TYR PRO GLN TYR SER GLU GLU ALA ARG LEU LYS SEQRES 14 B 175 ARG GLU GLU ILE SER GLY SEQRES 1 C 322 GLN ASP GLN ILE CYS ILE GLY TYR HIS ALA ASN ASN SER SEQRES 2 C 322 THR GLU GLN VAL ASP THR ILE MET GLU LYS ASN VAL THR SEQRES 3 C 322 VAL THR HIS ALA GLN ASP ILE LEU GLU LYS LYS HIS ASN SEQRES 4 C 322 GLY LYS LEU CYS ASP LEU ASP GLY VAL LYS PRO LEU ILE SEQRES 5 C 322 LEU ARG ASP CYS SER VAL ALA GLY TRP LEU LEU GLY ASN SEQRES 6 C 322 PRO MET CYS ASP GLU PHE ILE ASN VAL PRO GLU TRP SER SEQRES 7 C 322 TYR ILE VAL GLU LYS ALA ASN PRO VAL ASN ASP LEU CYS SEQRES 8 C 322 TYR PRO GLY ASP PHE ASN ASP TYR GLU GLU LEU LYS HIS SEQRES 9 C 322 LEU LEU SER ARG ILE ASN HIS PHE GLU LYS ILE GLN ILE SEQRES 10 C 322 ILE PRO LYS SER SER TRP SER SER HIS GLU ALA SER LEU SEQRES 11 C 322 GLY VAL SER SER ALA CYS PRO TYR GLN GLY LYS SER SER SEQRES 12 C 322 PHE PHE ARG ASN VAL VAL TRP LEU ILE LYS LYS ASP SER SEQRES 13 C 322 THR TYR PRO THR ILE LYS ARG SER TYR ASN ASN THR ASN SEQRES 14 C 322 GLN GLU ASP LEU LEU VAL LEU TRP GLY ILE HIS HIS PRO SEQRES 15 C 322 ASN ASP ALA ALA GLU GLN THR LYS LEU TYR GLN ASN PRO SEQRES 16 C 322 THR THR TYR ILE SER VAL GLY THR SER THR LEU ASN GLN SEQRES 17 C 322 ARG LEU VAL PRO ARG ILE ALA THR ARG SER LYS VAL LYS SEQRES 18 C 322 GLY LEU SER GLY ARG MET GLU PHE PHE TRP THR ILE LEU SEQRES 19 C 322 LYS PRO ASN ASP ALA ILE ASN PHE GLU SER ASN GLY ASN SEQRES 20 C 322 PHE ILE ALA PRO GLU TYR ALA TYR LYS ILE VAL LYS LYS SEQRES 21 C 322 GLY ASP SER THR ILE MET LYS SER GLU LEU GLU TYR GLY SEQRES 22 C 322 ASN CYS ASN THR LYS CYS GLN THR PRO MET GLY ALA ILE SEQRES 23 C 322 ASN SER SER MET PRO PHE HIS ASN ILE HIS PRO LEU THR SEQRES 24 C 322 ILE GLY GLU CYS PRO LYS TYR VAL LYS SER ASN ARG LEU SEQRES 25 C 322 VAL LEU ALA ILE GLY LEU ARG ASN SER PRO SEQRES 1 D 175 GLY LEU PHE GLY ALA ILE ALA GLY PHE ILE GLU GLY GLY SEQRES 2 D 175 TRP GLN GLY MET VAL ASP GLY TRP TYR GLY TYR HIS HIS SEQRES 3 D 175 SER ASN GLU GLN GLY SER GLY TYR ALA ALA ASP LYS GLU SEQRES 4 D 175 SER THR GLN LYS ALA ILE ASP GLY VAL THR ASN LYS VAL SEQRES 5 D 175 ASN SER ILE ILE ASP LYS MET ASN THR GLN PHE GLU ALA SEQRES 6 D 175 VAL GLY ARG GLU PHE ASN ASN LEU GLU ARG ARG ILE GLU SEQRES 7 D 175 ASN LEU ASN LYS LYS MET GLU ASP GLY PHE LEU ASP VAL SEQRES 8 D 175 TRP THR TYR ASN ALA GLU LEU LEU VAL LEU MET GLU ASN SEQRES 9 D 175 GLU ARG THR LEU ASP PHE HIS ASP SER ASN VAL LYS ASN SEQRES 10 D 175 LEU TYR ASP LYS VAL ARG LEU GLN LEU ARG ASP ASN ALA SEQRES 11 D 175 LYS GLU LEU GLY ASN GLY CYS PHE GLU PHE TYR HIS LYS SEQRES 12 D 175 CYS ASP ASN GLU CYS MET GLU SER VAL ARG ASN GLY THR SEQRES 13 D 175 TYR ASP TYR PRO GLN TYR SER GLU GLU ALA ARG LEU LYS SEQRES 14 D 175 ARG GLU GLU ILE SER GLY SEQRES 1 E 322 GLN ASP GLN ILE CYS ILE GLY TYR HIS ALA ASN ASN SER SEQRES 2 E 322 THR GLU GLN VAL ASP THR ILE MET GLU LYS ASN VAL THR SEQRES 3 E 322 VAL THR HIS ALA GLN ASP ILE LEU GLU LYS LYS HIS ASN SEQRES 4 E 322 GLY LYS LEU CYS ASP LEU ASP GLY VAL LYS PRO LEU ILE SEQRES 5 E 322 LEU ARG ASP CYS SER VAL ALA GLY TRP LEU LEU GLY ASN SEQRES 6 E 322 PRO MET CYS ASP GLU PHE ILE ASN VAL PRO GLU TRP SER SEQRES 7 E 322 TYR ILE VAL GLU LYS ALA ASN PRO VAL ASN ASP LEU CYS SEQRES 8 E 322 TYR PRO GLY ASP PHE ASN ASP TYR GLU GLU LEU LYS HIS SEQRES 9 E 322 LEU LEU SER ARG ILE ASN HIS PHE GLU LYS ILE GLN ILE SEQRES 10 E 322 ILE PRO LYS SER SER TRP SER SER HIS GLU ALA SER LEU SEQRES 11 E 322 GLY VAL SER SER ALA CYS PRO TYR GLN GLY LYS SER SER SEQRES 12 E 322 PHE PHE ARG ASN VAL VAL TRP LEU ILE LYS LYS ASP SER SEQRES 13 E 322 THR TYR PRO THR ILE LYS ARG SER TYR ASN ASN THR ASN SEQRES 14 E 322 GLN GLU ASP LEU LEU VAL LEU TRP GLY ILE HIS HIS PRO SEQRES 15 E 322 ASN ASP ALA ALA GLU GLN THR LYS LEU TYR GLN ASN PRO SEQRES 16 E 322 THR THR TYR ILE SER VAL GLY THR SER THR LEU ASN GLN SEQRES 17 E 322 ARG LEU VAL PRO ARG ILE ALA THR ARG SER LYS VAL LYS SEQRES 18 E 322 GLY LEU SER GLY ARG MET GLU PHE PHE TRP THR ILE LEU SEQRES 19 E 322 LYS PRO ASN ASP ALA ILE ASN PHE GLU SER ASN GLY ASN SEQRES 20 E 322 PHE ILE ALA PRO GLU TYR ALA TYR LYS ILE VAL LYS LYS SEQRES 21 E 322 GLY ASP SER THR ILE MET LYS SER GLU LEU GLU TYR GLY SEQRES 22 E 322 ASN CYS ASN THR LYS CYS GLN THR PRO MET GLY ALA ILE SEQRES 23 E 322 ASN SER SER MET PRO PHE HIS ASN ILE HIS PRO LEU THR SEQRES 24 E 322 ILE GLY GLU CYS PRO LYS TYR VAL LYS SER ASN ARG LEU SEQRES 25 E 322 VAL LEU ALA ILE GLY LEU ARG ASN SER PRO SEQRES 1 F 175 GLY LEU PHE GLY ALA ILE ALA GLY PHE ILE GLU GLY GLY SEQRES 2 F 175 TRP GLN GLY MET VAL ASP GLY TRP TYR GLY TYR HIS HIS SEQRES 3 F 175 SER ASN GLU GLN GLY SER GLY TYR ALA ALA ASP LYS GLU SEQRES 4 F 175 SER THR GLN LYS ALA ILE ASP GLY VAL THR ASN LYS VAL SEQRES 5 F 175 ASN SER ILE ILE ASP LYS MET ASN THR GLN PHE GLU ALA SEQRES 6 F 175 VAL GLY ARG GLU PHE ASN ASN LEU GLU ARG ARG ILE GLU SEQRES 7 F 175 ASN LEU ASN LYS LYS MET GLU ASP GLY PHE LEU ASP VAL SEQRES 8 F 175 TRP THR TYR ASN ALA GLU LEU LEU VAL LEU MET GLU ASN SEQRES 9 F 175 GLU ARG THR LEU ASP PHE HIS ASP SER ASN VAL LYS ASN SEQRES 10 F 175 LEU TYR ASP LYS VAL ARG LEU GLN LEU ARG ASP ASN ALA SEQRES 11 F 175 LYS GLU LEU GLY ASN GLY CYS PHE GLU PHE TYR HIS LYS SEQRES 12 F 175 CYS ASP ASN GLU CYS MET GLU SER VAL ARG ASN GLY THR SEQRES 13 F 175 TYR ASP TYR PRO GLN TYR SER GLU GLU ALA ARG LEU LYS SEQRES 14 F 175 ARG GLU GLU ILE SER GLY MODRES 4KDM ASN C 169 ASN GLYCOSYLATION SITE MODRES 4KDM ASN C 27 ASN GLYCOSYLATION SITE MODRES 4KDM ASN A 169 ASN GLYCOSYLATION SITE MODRES 4KDM ASN A 27 ASN GLYCOSYLATION SITE MODRES 4KDM ASN E 169 ASN GLYCOSYLATION SITE MODRES 4KDM ASN E 27 ASN GLYCOSYLATION SITE HET NAG G 1 14 HET NAG G 2 14 HET NAG H 1 14 HET NAG H 2 14 HET NAG I 1 14 HET NAG I 2 14 HET NAG A 601 14 HET NAG C 601 14 HET NAG E 601 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE FORMUL 7 NAG 9(C8 H15 N O6) FORMUL 13 HOH *170(H2 O) HELIX 1 1 SER A 60 LEU A 66 1 7 HELIX 2 2 ASP A 101 SER A 110 1 10 HELIX 3 3 PRO A 122 TRP A 126 5 5 HELIX 4 4 ASP A 187 TYR A 195 1 9 HELIX 5 5 ASP B 371 LYS B 392 1 22 HELIX 6 6 GLU B 408 ARG B 461 1 54 HELIX 7 7 ASP B 479 GLY B 489 1 11 HELIX 8 8 ASP B 492 GLN B 495 5 4 HELIX 9 9 TYR B 496 SER B 508 1 13 HELIX 10 10 SER C 60 LEU C 66 1 7 HELIX 11 11 ASP C 101 SER C 110 1 10 HELIX 12 12 PRO C 122 TRP C 126 5 5 HELIX 13 13 ASP C 187 TYR C 195 1 9 HELIX 14 14 ASP D 371 LYS D 392 1 22 HELIX 15 15 GLU D 408 ARG D 461 1 54 HELIX 16 16 ASP D 479 GLY D 489 1 11 HELIX 17 17 ASP D 492 SER D 508 1 17 HELIX 18 18 SER E 60 LEU E 66 1 7 HELIX 19 19 ASP E 101 SER E 110 1 10 HELIX 20 20 PRO E 122 TRP E 126 5 5 HELIX 21 21 ASP E 187 TYR E 195 1 9 HELIX 22 22 ASP F 371 LYS F 392 1 22 HELIX 23 23 GLU F 408 ARG F 461 1 54 HELIX 24 24 ASP F 479 GLY F 489 1 11 HELIX 25 25 TYR F 493 SER F 508 1 16 SHEET 1 A 5 GLY B 365 ALA B 370 0 SHEET 2 A 5 TYR B 356 ASN B 362 -1 N ASN B 362 O GLY B 365 SHEET 3 A 5 GLN A 6 TYR A 11 -1 N GLY A 10 O GLY B 357 SHEET 4 A 5 CYS B 471 PHE B 474 -1 O PHE B 472 N ILE A 7 SHEET 5 A 5 ALA B 464 GLU B 466 -1 N LYS B 465 O GLU B 473 SHEET 1 B 2 GLN A 19 VAL A 20 0 SHEET 2 B 2 VAL A 28 THR A 29 -1 O VAL A 28 N VAL A 20 SHEET 1 C 2 ALA A 33 ASP A 35 0 SHEET 2 C 2 VAL A 316 ALA A 318 -1 O LEU A 317 N GLN A 34 SHEET 1 D 3 LEU A 37 GLU A 38 0 SHEET 2 D 3 PHE A 295 HIS A 296 1 O PHE A 295 N GLU A 38 SHEET 3 D 3 LYS A 308 TYR A 309 1 O LYS A 308 N HIS A 296 SHEET 1 E 2 LEU A 45 LEU A 48 0 SHEET 2 E 2 TYR A 275 THR A 280 1 O CYS A 278 N ASP A 47 SHEET 1 F 3 LEU A 54 ILE A 55 0 SHEET 2 F 3 ILE A 83 GLU A 85 1 O VAL A 84 N LEU A 54 SHEET 3 F 3 ILE A 268 LYS A 270 1 O MET A 269 N ILE A 83 SHEET 1 G 5 GLY A 97 PHE A 99 0 SHEET 2 G 5 ARG A 229 LEU A 237 1 O PHE A 232 N ASP A 98 SHEET 3 G 5 ASP A 175 HIS A 184 -1 N TRP A 180 O PHE A 233 SHEET 4 G 5 TYR A 256 VAL A 261 -1 O ILE A 260 N ASP A 175 SHEET 5 G 5 HIS A 114 GLN A 119 -1 N GLU A 116 O LYS A 259 SHEET 1 H 5 GLY A 97 PHE A 99 0 SHEET 2 H 5 ARG A 229 LEU A 237 1 O PHE A 232 N ASP A 98 SHEET 3 H 5 ASP A 175 HIS A 184 -1 N TRP A 180 O PHE A 233 SHEET 4 H 5 PHE A 251 PRO A 254 -1 O ILE A 252 N GLY A 181 SHEET 5 H 5 VAL A 151 TRP A 153 -1 N VAL A 152 O ALA A 253 SHEET 1 I 2 HIS A 129 GLU A 130 0 SHEET 2 I 2 ILE A 155 LYS A 156 -1 O ILE A 155 N GLU A 130 SHEET 1 J 4 ILE A 164 ASN A 169 0 SHEET 2 J 4 ALA A 242 SER A 247 -1 O PHE A 245 N ARG A 166 SHEET 3 J 4 ILE A 202 GLY A 205 -1 N SER A 203 O GLU A 246 SHEET 4 J 4 ASN A 210 LEU A 213 -1 O LEU A 213 N ILE A 202 SHEET 1 K 3 CYS A 282 GLN A 283 0 SHEET 2 K 3 ILE A 303 GLY A 304 -1 O ILE A 303 N GLN A 283 SHEET 3 K 3 GLU B 398 ALA B 399 -1 O GLU B 398 N GLY A 304 SHEET 1 L 5 GLY D 365 ALA D 370 0 SHEET 2 L 5 TYR D 356 ASN D 362 -1 N ASN D 362 O GLY D 365 SHEET 3 L 5 GLN C 6 TYR C 11 -1 N CYS C 8 O HIS D 359 SHEET 4 L 5 CYS D 471 PHE D 474 -1 O PHE D 472 N ILE C 7 SHEET 5 L 5 ALA D 464 GLU D 466 -1 N LYS D 465 O GLU D 473 SHEET 1 M 2 GLN C 19 VAL C 20 0 SHEET 2 M 2 VAL C 28 THR C 29 -1 O VAL C 28 N VAL C 20 SHEET 1 N 2 ALA C 33 ASP C 35 0 SHEET 2 N 2 VAL C 316 ALA C 318 -1 O LEU C 317 N GLN C 34 SHEET 1 O 3 LEU C 37 GLU C 38 0 SHEET 2 O 3 PHE C 295 HIS C 296 1 O PHE C 295 N GLU C 38 SHEET 3 O 3 LYS C 308 TYR C 309 1 O LYS C 308 N HIS C 296 SHEET 1 P 2 LEU C 45 LEU C 48 0 SHEET 2 P 2 TYR C 275 THR C 280 1 O CYS C 278 N ASP C 47 SHEET 1 Q 3 LEU C 54 ILE C 55 0 SHEET 2 Q 3 ILE C 83 GLU C 85 1 O VAL C 84 N LEU C 54 SHEET 3 Q 3 ILE C 268 LYS C 270 1 O MET C 269 N ILE C 83 SHEET 1 R 5 GLY C 97 PHE C 99 0 SHEET 2 R 5 ARG C 229 LEU C 237 1 O PHE C 232 N ASP C 98 SHEET 3 R 5 ASP C 175 HIS C 184 -1 N HIS C 184 O ARG C 229 SHEET 4 R 5 TYR C 256 VAL C 261 -1 O ILE C 260 N ASP C 175 SHEET 5 R 5 HIS C 114 GLN C 119 -1 N GLU C 116 O LYS C 259 SHEET 1 S 5 GLY C 97 PHE C 99 0 SHEET 2 S 5 ARG C 229 LEU C 237 1 O PHE C 232 N ASP C 98 SHEET 3 S 5 ASP C 175 HIS C 184 -1 N HIS C 184 O ARG C 229 SHEET 4 S 5 PHE C 251 PRO C 254 -1 O ILE C 252 N GLY C 181 SHEET 5 S 5 VAL C 151 TRP C 153 -1 N VAL C 152 O ALA C 253 SHEET 1 T 2 SER C 136 PRO C 140 0 SHEET 2 T 2 SER C 145 SER C 146 -1 O SER C 146 N SER C 136 SHEET 1 U 4 ILE C 164 ASN C 169 0 SHEET 2 U 4 ALA C 242 SER C 247 -1 O PHE C 245 N ARG C 166 SHEET 3 U 4 ILE C 202 GLY C 205 -1 N SER C 203 O GLU C 246 SHEET 4 U 4 ASN C 210 LEU C 213 -1 O LEU C 213 N ILE C 202 SHEET 1 V 3 CYS C 282 GLN C 283 0 SHEET 2 V 3 ILE C 303 GLY C 304 -1 O ILE C 303 N GLN C 283 SHEET 3 V 3 GLU D 398 ALA D 399 -1 O GLU D 398 N GLY C 304 SHEET 1 W 5 GLY F 365 ALA F 370 0 SHEET 2 W 5 TYR F 356 ASN F 362 -1 N ASN F 362 O GLY F 365 SHEET 3 W 5 GLN E 6 TYR E 11 -1 N GLY E 10 O GLY F 357 SHEET 4 W 5 CYS F 471 PHE F 474 -1 O PHE F 472 N ILE E 7 SHEET 5 W 5 ALA F 464 GLU F 466 -1 N LYS F 465 O GLU F 473 SHEET 1 X 2 GLN E 19 VAL E 20 0 SHEET 2 X 2 VAL E 28 THR E 29 -1 O VAL E 28 N VAL E 20 SHEET 1 Y 2 ALA E 33 ASP E 35 0 SHEET 2 Y 2 VAL E 316 ALA E 318 -1 O LEU E 317 N GLN E 34 SHEET 1 Z 3 LEU E 37 GLU E 38 0 SHEET 2 Z 3 PHE E 295 HIS E 296 1 O PHE E 295 N GLU E 38 SHEET 3 Z 3 LYS E 308 TYR E 309 1 O LYS E 308 N HIS E 296 SHEET 1 AA 2 LEU E 45 LEU E 48 0 SHEET 2 AA 2 TYR E 275 THR E 280 1 O CYS E 278 N ASP E 47 SHEET 1 AB 3 LEU E 54 ILE E 55 0 SHEET 2 AB 3 ILE E 83 GLU E 85 1 O VAL E 84 N LEU E 54 SHEET 3 AB 3 ILE E 268 LYS E 270 1 O MET E 269 N ILE E 83 SHEET 1 AC 5 GLY E 97 PHE E 99 0 SHEET 2 AC 5 ARG E 229 LEU E 237 1 O PHE E 232 N ASP E 98 SHEET 3 AC 5 ASP E 175 HIS E 184 -1 N HIS E 184 O ARG E 229 SHEET 4 AC 5 TYR E 256 VAL E 261 -1 O ILE E 260 N ASP E 175 SHEET 5 AC 5 HIS E 114 GLN E 119 -1 N GLU E 116 O LYS E 259 SHEET 1 AD 5 GLY E 97 PHE E 99 0 SHEET 2 AD 5 ARG E 229 LEU E 237 1 O PHE E 232 N ASP E 98 SHEET 3 AD 5 ASP E 175 HIS E 184 -1 N HIS E 184 O ARG E 229 SHEET 4 AD 5 PHE E 251 PRO E 254 -1 O ILE E 252 N GLY E 181 SHEET 5 AD 5 VAL E 151 TRP E 153 -1 N VAL E 152 O ALA E 253 SHEET 1 AE 2 SER E 136 PRO E 140 0 SHEET 2 AE 2 SER E 145 SER E 146 -1 O SER E 146 N SER E 136 SHEET 1 AF 4 ILE E 164 ASN E 169 0 SHEET 2 AF 4 ALA E 242 SER E 247 -1 O PHE E 245 N ARG E 166 SHEET 3 AF 4 ILE E 202 GLY E 205 -1 N SER E 203 O GLU E 246 SHEET 4 AF 4 ASN E 210 LEU E 213 -1 O LEU E 213 N ILE E 202 SHEET 1 AG 3 CYS E 282 GLN E 283 0 SHEET 2 AG 3 ILE E 303 GLU E 305 -1 O ILE E 303 N GLN E 283 SHEET 3 AG 3 PHE F 397 ALA F 399 -1 O GLU F 398 N GLY E 304 SSBOND 1 CYS A 8 CYS B 471 1555 1555 2.03 SSBOND 2 CYS A 46 CYS A 278 1555 1555 2.04 SSBOND 3 CYS A 59 CYS A 71 1555 1555 2.03 SSBOND 4 CYS A 94 CYS A 139 1555 1555 2.04 SSBOND 5 CYS A 282 CYS A 306 1555 1555 2.03 SSBOND 6 CYS B 478 CYS B 482 1555 1555 2.04 SSBOND 7 CYS C 8 CYS D 471 1555 1555 2.03 SSBOND 8 CYS C 46 CYS C 278 1555 1555 2.04 SSBOND 9 CYS C 59 CYS C 71 1555 1555 2.03 SSBOND 10 CYS C 94 CYS C 139 1555 1555 2.04 SSBOND 11 CYS C 282 CYS C 306 1555 1555 2.03 SSBOND 12 CYS D 478 CYS D 482 1555 1555 2.03 SSBOND 13 CYS E 8 CYS F 471 1555 1555 2.03 SSBOND 14 CYS E 46 CYS E 278 1555 1555 2.04 SSBOND 15 CYS E 59 CYS E 71 1555 1555 2.04 SSBOND 16 CYS E 94 CYS E 139 1555 1555 2.03 SSBOND 17 CYS E 282 CYS E 306 1555 1555 2.03 SSBOND 18 CYS F 478 CYS F 482 1555 1555 2.03 LINK ND2 ASN A 27 C1 NAG A 601 1555 1555 1.44 LINK ND2 ASN A 169 C1 NAG G 1 1555 1555 1.44 LINK ND2 ASN C 27 C1 NAG C 601 1555 1555 1.44 LINK ND2 ASN C 169 C1 NAG H 1 1555 1555 1.43 LINK ND2 ASN E 27 C1 NAG E 601 1555 1555 1.45 LINK ND2 ASN E 169 C1 NAG I 1 1555 1555 1.44 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.44 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.44 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.44 CISPEP 1 VAL B 400 GLY B 401 0 -1.62 CISPEP 2 VAL D 400 GLY D 401 0 -2.47 CISPEP 3 VAL F 400 GLY F 401 0 -2.48 CRYST1 66.758 243.848 71.614 90.00 110.01 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014979 0.000000 0.005455 0.00000 SCALE2 0.000000 0.004101 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014861 0.00000