HEADER TRANSFERASE/DNA 01-MAY-13 4KHU TITLE TERNARY COMPLEX OF RB69 MUTANT L415F WITH A RIBONUCLEOTIDE AT -1 TITLE 2 POSITION COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GP43; COMPND 5 EC: 2.7.7.7; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA/RNA (5'-D(*AP*CP*A)-R(P*G)- COMPND 10 D(P*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3'); COMPND 11 CHAIN: T; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*CP*C)-3'); COMPND 15 CHAIN: P; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE RB69; SOURCE 3 ORGANISM_TAXID: 12353; SOURCE 4 GENE: 43; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 MOL_ID: 3; SOURCE 10 SYNTHETIC: YES KEYWDS RIBONUCLEOTIDE, TRANSFERASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.R.CLAUSEN,L.C.PEDERSEN REVDAT 3 28-FEB-24 4KHU 1 REMARK SEQADV LINK REVDAT 2 30-OCT-13 4KHU 1 JRNL REVDAT 1 09-OCT-13 4KHU 0 JRNL AUTH A.R.CLAUSEN,M.S.MURRAY,A.R.PASSER,L.C.PEDERSEN,T.A.KUNKEL JRNL TITL STRUCTURE-FUNCTION ANALYSIS OF RIBONUCLEOTIDE BYPASS BY B JRNL TITL 2 FAMILY DNA REPLICASES. JRNL REF PROC.NATL.ACAD.SCI.USA V. 110 16802 2013 JRNL REFN ISSN 0027-8424 JRNL PMID 24082122 JRNL DOI 10.1073/PNAS.1309119110 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7_650) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.62 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 82.8 REMARK 3 NUMBER OF REFLECTIONS : 64642 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.950 REMARK 3 FREE R VALUE TEST SET COUNT : 3199 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 21.6220 - 5.7993 0.99 3416 159 0.2138 0.2520 REMARK 3 2 5.7993 - 4.6178 0.96 3189 180 0.1467 0.1807 REMARK 3 3 4.6178 - 4.0384 0.93 3038 176 0.1350 0.1769 REMARK 3 4 4.0384 - 3.6711 0.95 3110 158 0.1687 0.2051 REMARK 3 5 3.6711 - 3.4091 0.99 3233 169 0.1981 0.2257 REMARK 3 6 3.4091 - 3.2088 0.97 3133 170 0.2060 0.2170 REMARK 3 7 3.2088 - 3.0485 0.88 2855 136 0.2196 0.2841 REMARK 3 8 3.0485 - 2.9161 0.79 2537 128 0.2347 0.2731 REMARK 3 9 2.9161 - 2.8041 0.75 2435 120 0.2567 0.2829 REMARK 3 10 2.8041 - 2.7076 0.73 2344 123 0.2745 0.2987 REMARK 3 11 2.7076 - 2.6230 0.74 2353 141 0.2580 0.3030 REMARK 3 12 2.6230 - 2.5482 0.74 2345 140 0.2767 0.3105 REMARK 3 13 2.5482 - 2.4812 0.73 2357 113 0.2627 0.2977 REMARK 3 14 2.4812 - 2.4207 0.72 2297 127 0.2750 0.3496 REMARK 3 15 2.4207 - 2.3658 0.73 2319 119 0.2542 0.3058 REMARK 3 16 2.3658 - 2.3155 0.78 2475 136 0.2578 0.3713 REMARK 3 17 2.3155 - 2.2692 0.76 2434 123 0.2580 0.2891 REMARK 3 18 2.2692 - 2.2265 0.86 2753 140 0.2269 0.3393 REMARK 3 19 2.2265 - 2.1867 0.87 2756 133 0.2190 0.2454 REMARK 3 20 2.1867 - 2.1497 0.86 2799 126 0.2321 0.3072 REMARK 3 21 2.1497 - 2.1150 0.83 2636 140 0.2580 0.3098 REMARK 3 22 2.1150 - 2.0825 0.77 2448 135 0.2747 0.3562 REMARK 3 23 2.0825 - 2.0520 0.69 2181 107 0.2865 0.4009 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 47.43 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.030 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.46730 REMARK 3 B22 (A**2) : -5.00150 REMARK 3 B33 (A**2) : 5.46880 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 8274 REMARK 3 ANGLE : 1.209 11387 REMARK 3 CHIRALITY : 0.074 1212 REMARK 3 PLANARITY : 0.005 1356 REMARK 3 DIHEDRAL : 12.897 2792 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 1:98) REMARK 3 ORIGIN FOR THE GROUP (A): 28.7811 63.4363 34.0033 REMARK 3 T TENSOR REMARK 3 T11: 0.2133 T22: 0.2308 REMARK 3 T33: 0.4198 T12: -0.0150 REMARK 3 T13: 0.0045 T23: 0.0641 REMARK 3 L TENSOR REMARK 3 L11: 0.1038 L22: 0.6111 REMARK 3 L33: 0.1878 L12: 0.1391 REMARK 3 L13: -0.0423 L23: -0.1193 REMARK 3 S TENSOR REMARK 3 S11: 0.0874 S12: 0.0343 S13: 0.0287 REMARK 3 S21: 0.0861 S22: -0.1001 S23: -0.4047 REMARK 3 S31: -0.0515 S32: 0.0475 S33: 0.0140 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 99:197) REMARK 3 ORIGIN FOR THE GROUP (A): 12.5577 30.7012 52.3804 REMARK 3 T TENSOR REMARK 3 T11: 0.2183 T22: 0.1568 REMARK 3 T33: 0.1770 T12: -0.0117 REMARK 3 T13: -0.0395 T23: 0.0239 REMARK 3 L TENSOR REMARK 3 L11: 0.1173 L22: 0.5032 REMARK 3 L33: 0.5601 L12: -0.0403 REMARK 3 L13: 0.0524 L23: 0.1151 REMARK 3 S TENSOR REMARK 3 S11: 0.0306 S12: 0.0177 S13: -0.0337 REMARK 3 S21: 0.1923 S22: -0.1336 S23: -0.1915 REMARK 3 S31: 0.1209 S32: -0.1019 S33: 0.0014 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 198:270) REMARK 3 ORIGIN FOR THE GROUP (A): 15.6007 46.3235 53.5278 REMARK 3 T TENSOR REMARK 3 T11: 0.2992 T22: 0.2701 REMARK 3 T33: 0.2621 T12: -0.0237 REMARK 3 T13: -0.0660 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 0.2412 L22: 0.2617 REMARK 3 L33: 0.1709 L12: 0.2579 REMARK 3 L13: 0.1071 L23: 0.1085 REMARK 3 S TENSOR REMARK 3 S11: 0.0842 S12: -0.1401 S13: 0.0632 REMARK 3 S21: 0.2645 S22: -0.1503 S23: -0.1266 REMARK 3 S31: -0.1513 S32: 0.0753 S33: 0.0248 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 271:310) REMARK 3 ORIGIN FOR THE GROUP (A): -0.1758 35.2680 40.0103 REMARK 3 T TENSOR REMARK 3 T11: 0.1909 T22: 0.1973 REMARK 3 T33: 0.1782 T12: 0.0084 REMARK 3 T13: 0.0041 T23: -0.0015 REMARK 3 L TENSOR REMARK 3 L11: 0.2038 L22: 0.2481 REMARK 3 L33: 0.1812 L12: -0.0248 REMARK 3 L13: 0.0706 L23: 0.1619 REMARK 3 S TENSOR REMARK 3 S11: 0.0162 S12: 0.0186 S13: 0.0816 REMARK 3 S21: 0.0387 S22: -0.0711 S23: 0.1094 REMARK 3 S31: -0.0126 S32: -0.0667 S33: 0.0330 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 311:416) REMARK 3 ORIGIN FOR THE GROUP (A): 7.6643 46.3914 29.0542 REMARK 3 T TENSOR REMARK 3 T11: 0.0405 T22: 0.0112 REMARK 3 T33: -0.1241 T12: 0.0488 REMARK 3 T13: -0.0377 T23: 0.1019 REMARK 3 L TENSOR REMARK 3 L11: 0.2307 L22: 0.3520 REMARK 3 L33: 0.4274 L12: -0.0982 REMARK 3 L13: 0.2679 L23: -0.0983 REMARK 3 S TENSOR REMARK 3 S11: 0.0138 S12: -0.0871 S13: 0.3128 REMARK 3 S21: -0.1874 S22: -0.0874 S23: -0.2432 REMARK 3 S31: 0.2977 S32: -0.1048 S33: -0.1084 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 417:541) REMARK 3 ORIGIN FOR THE GROUP (A): 9.0189 42.5950 11.6225 REMARK 3 T TENSOR REMARK 3 T11: 0.3665 T22: 0.2247 REMARK 3 T33: 0.1934 T12: 0.0451 REMARK 3 T13: 0.0803 T23: 0.0194 REMARK 3 L TENSOR REMARK 3 L11: 0.4178 L22: 0.4006 REMARK 3 L33: 0.3449 L12: -0.0985 REMARK 3 L13: 0.1459 L23: -0.0395 REMARK 3 S TENSOR REMARK 3 S11: -0.0081 S12: 0.1719 S13: -0.0424 REMARK 3 S21: -0.2468 S22: 0.0088 S23: -0.0760 REMARK 3 S31: 0.2348 S32: 0.0902 S33: 0.0614 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 542:683) REMARK 3 ORIGIN FOR THE GROUP (A): -0.5026 46.5598 6.7202 REMARK 3 T TENSOR REMARK 3 T11: 0.4013 T22: 0.2393 REMARK 3 T33: 0.1387 T12: -0.0024 REMARK 3 T13: 0.0166 T23: 0.0235 REMARK 3 L TENSOR REMARK 3 L11: 0.2869 L22: 0.1644 REMARK 3 L33: 0.1584 L12: -0.1176 REMARK 3 L13: -0.0201 L23: -0.0907 REMARK 3 S TENSOR REMARK 3 S11: -0.0138 S12: 0.1610 S13: -0.0015 REMARK 3 S21: -0.3036 S22: -0.0040 S23: -0.0494 REMARK 3 S31: 0.2178 S32: 0.0595 S33: 0.0017 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 684:724) REMARK 3 ORIGIN FOR THE GROUP (A): -10.0085 34.4611 10.8490 REMARK 3 T TENSOR REMARK 3 T11: 0.4694 T22: 0.2354 REMARK 3 T33: 0.1889 T12: -0.0201 REMARK 3 T13: 0.0046 T23: -0.0042 REMARK 3 L TENSOR REMARK 3 L11: 0.0558 L22: 0.1847 REMARK 3 L33: 0.0278 L12: 0.0057 REMARK 3 L13: 0.0138 L23: 0.0490 REMARK 3 S TENSOR REMARK 3 S11: -0.1041 S12: 0.1169 S13: 0.0016 REMARK 3 S21: -0.2439 S22: 0.0298 S23: -0.0218 REMARK 3 S31: 0.2117 S32: -0.0410 S33: -0.0045 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 725:870) REMARK 3 ORIGIN FOR THE GROUP (A): -20.1870 38.3404 39.1102 REMARK 3 T TENSOR REMARK 3 T11: 0.1982 T22: 0.2363 REMARK 3 T33: 0.2241 T12: -0.0116 REMARK 3 T13: 0.0242 T23: 0.0089 REMARK 3 L TENSOR REMARK 3 L11: 0.4003 L22: 0.6130 REMARK 3 L33: 0.1943 L12: -0.0448 REMARK 3 L13: 0.0652 L23: -0.0771 REMARK 3 S TENSOR REMARK 3 S11: -0.0793 S12: -0.1443 S13: -0.0422 REMARK 3 S21: -0.0109 S22: 0.0058 S23: 0.2361 REMARK 3 S31: 0.0419 S32: -0.0816 S33: 0.0134 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN A AND RESID 871:902) REMARK 3 ORIGIN FOR THE GROUP (A): -32.3606 34.9798 20.1727 REMARK 3 T TENSOR REMARK 3 T11: 0.3032 T22: 0.3259 REMARK 3 T33: 0.3367 T12: -0.0579 REMARK 3 T13: -0.0806 T23: 0.0127 REMARK 3 L TENSOR REMARK 3 L11: 0.3598 L22: 0.0876 REMARK 3 L33: 0.1768 L12: 0.1741 REMARK 3 L13: 0.2437 L23: 0.1278 REMARK 3 S TENSOR REMARK 3 S11: -0.1209 S12: 0.0791 S13: 0.0084 REMARK 3 S21: -0.1205 S22: -0.0560 S23: 0.0889 REMARK 3 S31: -0.0548 S32: -0.0627 S33: 0.0366 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN P AND RESID 102:106) REMARK 3 ORIGIN FOR THE GROUP (A): -35.9478 57.7946 30.2498 REMARK 3 T TENSOR REMARK 3 T11: 0.3161 T22: 0.8587 REMARK 3 T33: 0.9621 T12: -0.0049 REMARK 3 T13: 0.1245 T23: 0.1811 REMARK 3 L TENSOR REMARK 3 L11: 0.2855 L22: 0.1645 REMARK 3 L33: 0.0256 L12: 0.1756 REMARK 3 L13: -0.0419 L23: 0.0073 REMARK 3 S TENSOR REMARK 3 S11: -0.0261 S12: 0.0258 S13: -0.1756 REMARK 3 S21: 0.0504 S22: -0.0399 S23: 0.1748 REMARK 3 S31: 0.1268 S32: -0.2865 S33: 0.0633 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN P AND RESID 107:110) REMARK 3 ORIGIN FOR THE GROUP (A): -19.9752 60.1416 32.2900 REMARK 3 T TENSOR REMARK 3 T11: 0.2337 T22: 0.3674 REMARK 3 T33: 0.7083 T12: 0.0517 REMARK 3 T13: -0.0354 T23: 0.0148 REMARK 3 L TENSOR REMARK 3 L11: 0.6100 L22: 0.2984 REMARK 3 L33: 0.0483 L12: -0.4239 REMARK 3 L13: -0.1716 L23: 0.1198 REMARK 3 S TENSOR REMARK 3 S11: -0.0262 S12: 0.1373 S13: 0.3197 REMARK 3 S21: -0.0412 S22: 0.1065 S23: 0.2755 REMARK 3 S31: -0.1830 S32: -0.2700 S33: -0.0376 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN P AND RESID 111:115) REMARK 3 ORIGIN FOR THE GROUP (A): -9.2076 48.5333 26.7388 REMARK 3 T TENSOR REMARK 3 T11: 0.1944 T22: 0.2724 REMARK 3 T33: 0.2460 T12: -0.0019 REMARK 3 T13: 0.0567 T23: -0.0050 REMARK 3 L TENSOR REMARK 3 L11: 0.1038 L22: 0.0490 REMARK 3 L33: 0.1778 L12: 0.0477 REMARK 3 L13: 0.1254 L23: 0.0280 REMARK 3 S TENSOR REMARK 3 S11: 0.0645 S12: 0.0579 S13: 0.0756 REMARK 3 S21: -0.0073 S22: 0.0347 S23: -0.0927 REMARK 3 S31: 0.0507 S32: -0.0874 S33: -0.0430 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: (CHAIN T AND RESID 1:8) REMARK 3 ORIGIN FOR THE GROUP (A): -2.9707 57.0704 26.1607 REMARK 3 T TENSOR REMARK 3 T11: 0.1442 T22: 0.2277 REMARK 3 T33: 0.2133 T12: 0.0248 REMARK 3 T13: 0.0626 T23: 0.0071 REMARK 3 L TENSOR REMARK 3 L11: 0.0217 L22: 0.0444 REMARK 3 L33: 0.3117 L12: 0.0169 REMARK 3 L13: 0.0773 L23: 0.0652 REMARK 3 S TENSOR REMARK 3 S11: -0.0693 S12: -0.0078 S13: -0.0584 REMARK 3 S21: -0.0098 S22: -0.0251 S23: 0.0218 REMARK 3 S31: -0.1226 S32: 0.0675 S33: -0.0186 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: (CHAIN T AND RESID 9:12) REMARK 3 ORIGIN FOR THE GROUP (A): -23.1447 51.5581 31.8849 REMARK 3 T TENSOR REMARK 3 T11: 0.2762 T22: 0.4266 REMARK 3 T33: 0.4750 T12: 0.0632 REMARK 3 T13: 0.0756 T23: -0.0195 REMARK 3 L TENSOR REMARK 3 L11: 0.3987 L22: 0.0072 REMARK 3 L33: 0.2689 L12: -0.0328 REMARK 3 L13: -0.3292 L23: 0.0285 REMARK 3 S TENSOR REMARK 3 S11: -0.0540 S12: -0.0513 S13: 0.1076 REMARK 3 S21: 0.1056 S22: 0.0170 S23: 0.1643 REMARK 3 S31: 0.0580 S32: -0.1776 S33: 0.0759 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: (CHAIN T AND RESID 13:18) REMARK 3 ORIGIN FOR THE GROUP (A): -37.5394 64.2513 32.8287 REMARK 3 T TENSOR REMARK 3 T11: 0.0544 T22: 0.3386 REMARK 3 T33: 0.6070 T12: 0.1683 REMARK 3 T13: -0.0379 T23: 0.0509 REMARK 3 L TENSOR REMARK 3 L11: 0.3762 L22: 0.1482 REMARK 3 L33: 0.4529 L12: 0.1103 REMARK 3 L13: 0.3826 L23: 0.0172 REMARK 3 S TENSOR REMARK 3 S11: -0.1253 S12: -0.0441 S13: 0.0364 REMARK 3 S21: 0.0960 S22: 0.1057 S23: -0.0012 REMARK 3 S31: 0.1251 S32: 0.1627 S33: 0.0025 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4KHU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000079357. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAY-10 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 300 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64642 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.600 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.50300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.7_650 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM TRIS-HCL, 13% PEG350, 180 MM REMARK 280 CALCIUM CHLORIDE, PH 7.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 40.48850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.93000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 59.67500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 63.93000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.48850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 59.67500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 42100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -91.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, T, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 255 REMARK 465 MET A 256 REMARK 465 TYR A 257 REMARK 465 GLY A 258 REMARK 465 PHE A 903 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 2 CD CE NZ REMARK 470 ARG A 25 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 45 OE1 NE2 REMARK 470 LYS A 48 NZ REMARK 470 LYS A 55 NZ REMARK 470 ARG A 66 NE CZ NH1 NH2 REMARK 470 GLN A 70 CD OE1 NE2 REMARK 470 LYS A 73 CG CD CE NZ REMARK 470 ASN A 98 CG OD1 ND2 REMARK 470 LYS A 102 NZ REMARK 470 ASP A 121 CG OD1 OD2 REMARK 470 LYS A 130 CE NZ REMARK 470 GLU A 160 OE1 OE2 REMARK 470 LYS A 195 CD CE NZ REMARK 470 LYS A 251 CG CD CE NZ REMARK 470 LYS A 302 CG CD CE NZ REMARK 470 LYS A 304 CG CD CE NZ REMARK 470 LYS A 311 CG CD CE NZ REMARK 470 GLU A 314 CG CD OE1 OE2 REMARK 470 LYS A 405 CE NZ REMARK 470 LYS A 483 CD CE NZ REMARK 470 LEU A 508 CG CD1 CD2 REMARK 470 LYS A 529 CD CE NZ REMARK 470 LYS A 531 CG CD CE NZ REMARK 470 LYS A 532 NZ REMARK 470 LYS A 536 CD CE NZ REMARK 470 GLU A 607 OE1 OE2 REMARK 470 GLU A 612 CG CD OE1 OE2 REMARK 470 GLU A 614 CD OE1 OE2 REMARK 470 SER A 639 OG REMARK 470 LYS A 640 CD CE NZ REMARK 470 LYS A 653 CG CD CE NZ REMARK 470 LYS A 696 CG CD CE NZ REMARK 470 LYS A 734 CE NZ REMARK 470 LYS A 800 CD CE NZ REMARK 470 ILE A 819 CG1 CG2 CD1 REMARK 470 LYS A 893 CG CD CE NZ REMARK 470 LYS A 894 CD CE NZ REMARK 470 SER A 896 OG REMARK 470 ASP A 902 CG OD1 OD2 REMARK 470 DC P 115 O3' REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DA T 7 O3' DA T 7 C3' -0.067 REMARK 500 DA T 8 O3' DA T 8 C3' -0.047 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA T 3 O4' - C1' - N9 ANGL. DEV. = 3.2 DEGREES REMARK 500 G T 4 N3 - C2 - N2 ANGL. DEV. = -5.1 DEGREES REMARK 500 DT T 6 N3 - C4 - O4 ANGL. DEV. = 3.7 DEGREES REMARK 500 DA T 7 O4' - C1' - N9 ANGL. DEV. = 7.2 DEGREES REMARK 500 DA T 8 O4' - C4' - C3' ANGL. DEV. = -2.9 DEGREES REMARK 500 DG T 9 O4' - C1' - N9 ANGL. DEV. = 2.7 DEGREES REMARK 500 DG T 12 C5 - C6 - N1 ANGL. DEV. = 3.2 DEGREES REMARK 500 DT T 13 C4 - C5 - C7 ANGL. DEV. = 4.0 DEGREES REMARK 500 DT T 13 C6 - C5 - C7 ANGL. DEV. = -4.4 DEGREES REMARK 500 DC T 15 O4' - C1' - N1 ANGL. DEV. = 5.2 DEGREES REMARK 500 DG T 16 C2 - N3 - C4 ANGL. DEV. = -3.5 DEGREES REMARK 500 DC T 17 O4' - C1' - C2' ANGL. DEV. = -5.3 DEGREES REMARK 500 DC T 17 O4' - C1' - N1 ANGL. DEV. = 7.3 DEGREES REMARK 500 DG T 18 C6 - N1 - C2 ANGL. DEV. = -5.0 DEGREES REMARK 500 DG T 18 C5 - C6 - N1 ANGL. DEV. = 3.5 DEGREES REMARK 500 DG P 102 O4' - C4' - C3' ANGL. DEV. = -4.7 DEGREES REMARK 500 DG P 102 O4' - C1' - N9 ANGL. DEV. = 1.8 DEGREES REMARK 500 DC P 103 C3' - C2' - C1' ANGL. DEV. = -5.8 DEGREES REMARK 500 DC P 103 O4' - C1' - N1 ANGL. DEV. = 2.8 DEGREES REMARK 500 DG P 104 O4' - C4' - C3' ANGL. DEV. = -2.5 DEGREES REMARK 500 DG P 105 O4' - C1' - N9 ANGL. DEV. = -5.2 DEGREES REMARK 500 DA P 106 O4' - C1' - N9 ANGL. DEV. = 4.9 DEGREES REMARK 500 DC P 107 O4' - C4' - C3' ANGL. DEV. = -2.8 DEGREES REMARK 500 DC P 107 C1' - O4' - C4' ANGL. DEV. = -7.0 DEGREES REMARK 500 DT P 108 N3 - C4 - O4 ANGL. DEV. = 4.9 DEGREES REMARK 500 DT P 108 C5 - C4 - O4 ANGL. DEV. = -5.0 DEGREES REMARK 500 DG P 109 O4' - C1' - N9 ANGL. DEV. = 2.2 DEGREES REMARK 500 DT P 111 O5' - P - OP2 ANGL. DEV. = -5.6 DEGREES REMARK 500 DT P 112 O5' - P - OP1 ANGL. DEV. = -5.5 DEGREES REMARK 500 DT P 112 O4' - C4' - C3' ANGL. DEV. = 4.3 DEGREES REMARK 500 DT P 112 O4' - C1' - N1 ANGL. DEV. = 3.7 DEGREES REMARK 500 DA P 113 C4' - C3' - C2' ANGL. DEV. = 5.5 DEGREES REMARK 500 DA P 113 N1 - C2 - N3 ANGL. DEV. = -4.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 97 60.13 -118.68 REMARK 500 ASN A 98 49.11 -74.50 REMARK 500 ASP A 121 48.85 -90.51 REMARK 500 VAL A 211 -62.53 -92.66 REMARK 500 PHE A 221 -63.04 -124.56 REMARK 500 ARG A 246 23.94 48.75 REMARK 500 LYS A 352 61.59 65.72 REMARK 500 SER A 414 61.64 36.59 REMARK 500 ASN A 424 52.42 74.85 REMARK 500 ASP A 511 -168.07 -169.54 REMARK 500 LYS A 531 5.32 -69.47 REMARK 500 ASP A 579 104.01 -164.66 REMARK 500 THR A 622 -66.20 73.79 REMARK 500 ASP A 623 23.92 -150.23 REMARK 500 GLU A 686 -85.14 -102.99 REMARK 500 LYS A 888 39.93 73.14 REMARK 500 LYS A 888 39.37 73.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1004 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 192 OD1 REMARK 620 2 ASP A 192 OD2 48.2 REMARK 620 3 GLU A 196 OE2 73.6 121.7 REMARK 620 4 GLU A 196 OE1 75.7 109.6 47.3 REMARK 620 5 HOH A1101 O 87.4 73.4 111.5 64.3 REMARK 620 6 HOH A1248 O 128.4 83.9 145.6 150.7 97.0 REMARK 620 7 HOH A1472 O 149.2 161.8 76.3 79.4 97.9 81.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1002 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 411 OD2 REMARK 620 2 ASP A 411 OD1 50.7 REMARK 620 3 LEU A 412 O 103.6 67.8 REMARK 620 4 ASP A 623 OD1 81.1 112.5 85.7 REMARK 620 5 TTP A1001 O1B 162.0 145.2 93.1 93.7 REMARK 620 6 TTP A1001 O1A 86.5 125.8 166.2 86.7 76.0 REMARK 620 7 TTP A1001 O2G 103.7 76.0 100.3 171.1 79.5 86.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1008 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 411 OD2 REMARK 620 2 ASP A 623 OD2 93.3 REMARK 620 3 TTP A1001 O1A 80.2 84.2 REMARK 620 4 HOH A1214 O 140.5 79.4 136.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1003 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 505 O REMARK 620 2 ASN A 507 OD1 110.1 REMARK 620 3 LYS A 531 O 168.6 70.5 REMARK 620 4 HOH A1516 O 94.1 151.3 88.8 REMARK 620 5 HOH A1542 O 98.9 63.9 70.9 128.8 REMARK 620 6 HOH A1548 O 59.9 87.3 131.1 92.0 136.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1006 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 660 OE1 REMARK 620 2 ASP A 684 OD2 77.6 REMARK 620 3 HOH A1237 O 74.0 83.7 REMARK 620 4 HOH A1554 O 147.9 70.8 97.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TTP A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1008 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4KHQ RELATED DB: PDB REMARK 900 RELATED ID: 4KHS RELATED DB: PDB REMARK 900 RELATED ID: 4KHW RELATED DB: PDB REMARK 900 RELATED ID: 4KHY RELATED DB: PDB REMARK 900 RELATED ID: 4KI4 RELATED DB: PDB REMARK 900 RELATED ID: 4KI6 RELATED DB: PDB DBREF 4KHU A 1 903 UNP Q38087 DPOL_BPR69 1 903 DBREF 4KHU T 1 18 PDB 4KHU 4KHU 1 18 DBREF 4KHU P 102 115 PDB 4KHU 4KHU 102 115 SEQADV 4KHU ALA A 222 UNP Q38087 ASP 222 ENGINEERED MUTATION SEQADV 4KHU ALA A 327 UNP Q38087 ASP 327 ENGINEERED MUTATION SEQADV 4KHU PHE A 415 UNP Q38087 LEU 415 ENGINEERED MUTATION SEQRES 1 A 903 MET LYS GLU PHE TYR LEU THR VAL GLU GLN ILE GLY ASP SEQRES 2 A 903 SER ILE PHE GLU ARG TYR ILE ASP SER ASN GLY ARG GLU SEQRES 3 A 903 ARG THR ARG GLU VAL GLU TYR LYS PRO SER LEU PHE ALA SEQRES 4 A 903 HIS CYS PRO GLU SER GLN ALA THR LYS TYR PHE ASP ILE SEQRES 5 A 903 TYR GLY LYS PRO CYS THR ARG LYS LEU PHE ALA ASN MET SEQRES 6 A 903 ARG ASP ALA SER GLN TRP ILE LYS ARG MET GLU ASP ILE SEQRES 7 A 903 GLY LEU GLU ALA LEU GLY MET ASP ASP PHE LYS LEU ALA SEQRES 8 A 903 TYR LEU SER ASP THR TYR ASN TYR GLU ILE LYS TYR ASP SEQRES 9 A 903 HIS THR LYS ILE ARG VAL ALA ASN PHE ASP ILE GLU VAL SEQRES 10 A 903 THR SER PRO ASP GLY PHE PRO GLU PRO SER GLN ALA LYS SEQRES 11 A 903 HIS PRO ILE ASP ALA ILE THR HIS TYR ASP SER ILE ASP SEQRES 12 A 903 ASP ARG PHE TYR VAL PHE ASP LEU LEU ASN SER PRO TYR SEQRES 13 A 903 GLY ASN VAL GLU GLU TRP SER ILE GLU ILE ALA ALA LYS SEQRES 14 A 903 LEU GLN GLU GLN GLY GLY ASP GLU VAL PRO SER GLU ILE SEQRES 15 A 903 ILE ASP LYS ILE ILE TYR MET PRO PHE ASP ASN GLU LYS SEQRES 16 A 903 GLU LEU LEU MET GLU TYR LEU ASN PHE TRP GLN GLN LYS SEQRES 17 A 903 THR PRO VAL ILE LEU THR GLY TRP ASN VAL GLU SER PHE SEQRES 18 A 903 ALA ILE PRO TYR VAL TYR ASN ARG ILE LYS ASN ILE PHE SEQRES 19 A 903 GLY GLU SER THR ALA LYS ARG LEU SER PRO HIS ARG LYS SEQRES 20 A 903 THR ARG VAL LYS VAL ILE GLU ASN MET TYR GLY SER ARG SEQRES 21 A 903 GLU ILE ILE THR LEU PHE GLY ILE SER VAL LEU ASP TYR SEQRES 22 A 903 ILE ASP LEU TYR LYS LYS PHE SER PHE THR ASN GLN PRO SEQRES 23 A 903 SER TYR SER LEU ASP TYR ILE SER GLU PHE GLU LEU ASN SEQRES 24 A 903 VAL GLY LYS LEU LYS TYR ASP GLY PRO ILE SER LYS LEU SEQRES 25 A 903 ARG GLU SER ASN HIS GLN ARG TYR ILE SER TYR ASN ILE SEQRES 26 A 903 ILE ALA VAL TYR ARG VAL LEU GLN ILE ASP ALA LYS ARG SEQRES 27 A 903 GLN PHE ILE ASN LEU SER LEU ASP MET GLY TYR TYR ALA SEQRES 28 A 903 LYS ILE GLN ILE GLN SER VAL PHE SER PRO ILE LYS THR SEQRES 29 A 903 TRP ASP ALA ILE ILE PHE ASN SER LEU LYS GLU GLN ASN SEQRES 30 A 903 LYS VAL ILE PRO GLN GLY ARG SER HIS PRO VAL GLN PRO SEQRES 31 A 903 TYR PRO GLY ALA PHE VAL LYS GLU PRO ILE PRO ASN ARG SEQRES 32 A 903 TYR LYS TYR VAL MET SER PHE ASP LEU THR SER PHE TYR SEQRES 33 A 903 PRO SER ILE ILE ARG GLN VAL ASN ILE SER PRO GLU THR SEQRES 34 A 903 ILE ALA GLY THR PHE LYS VAL ALA PRO LEU HIS ASP TYR SEQRES 35 A 903 ILE ASN ALA VAL ALA GLU ARG PRO SER ASP VAL TYR SER SEQRES 36 A 903 CYS SER PRO ASN GLY MET MET TYR TYR LYS ASP ARG ASP SEQRES 37 A 903 GLY VAL VAL PRO THR GLU ILE THR LYS VAL PHE ASN GLN SEQRES 38 A 903 ARG LYS GLU HIS LYS GLY TYR MET LEU ALA ALA GLN ARG SEQRES 39 A 903 ASN GLY GLU ILE ILE LYS GLU ALA LEU HIS ASN PRO ASN SEQRES 40 A 903 LEU SER VAL ASP GLU PRO LEU ASP VAL ASP TYR ARG PHE SEQRES 41 A 903 ASP PHE SER ASP GLU ILE LYS GLU LYS ILE LYS LYS LEU SEQRES 42 A 903 SER ALA LYS SER LEU ASN GLU MET LEU PHE ARG ALA GLN SEQRES 43 A 903 ARG THR GLU VAL ALA GLY MET THR ALA GLN ILE ASN ARG SEQRES 44 A 903 LYS LEU LEU ILE ASN SER LEU TYR GLY ALA LEU GLY ASN SEQRES 45 A 903 VAL TRP PHE ARG TYR TYR ASP LEU ARG ASN ALA THR ALA SEQRES 46 A 903 ILE THR THR PHE GLY GLN MET ALA LEU GLN TRP ILE GLU SEQRES 47 A 903 ARG LYS VAL ASN GLU TYR LEU ASN GLU VAL CYS GLY THR SEQRES 48 A 903 GLU GLY GLU ALA PHE VAL LEU TYR GLY ASP THR ASP SER SEQRES 49 A 903 ILE TYR VAL SER ALA ASP LYS ILE ILE ASP LYS VAL GLY SEQRES 50 A 903 GLU SER LYS PHE ARG ASP THR ASN HIS TRP VAL ASP PHE SEQRES 51 A 903 LEU ASP LYS PHE ALA ARG GLU ARG MET GLU PRO ALA ILE SEQRES 52 A 903 ASP ARG GLY PHE ARG GLU MET CYS GLU TYR MET ASN ASN SEQRES 53 A 903 LYS GLN HIS LEU MET PHE MET ASP ARG GLU ALA ILE ALA SEQRES 54 A 903 GLY PRO PRO LEU GLY SER LYS GLY ILE GLY GLY PHE TRP SEQRES 55 A 903 THR GLY LYS LYS ARG TYR ALA LEU ASN VAL TRP ASP MET SEQRES 56 A 903 GLU GLY THR ARG TYR ALA GLU PRO LYS LEU LYS ILE MET SEQRES 57 A 903 GLY LEU GLU THR GLN LYS SER SER THR PRO LYS ALA VAL SEQRES 58 A 903 GLN LYS ALA LEU LYS GLU CYS ILE ARG ARG MET LEU GLN SEQRES 59 A 903 GLU GLY GLU GLU SER LEU GLN GLU TYR PHE LYS GLU PHE SEQRES 60 A 903 GLU LYS GLU PHE ARG GLN LEU ASN TYR ILE SER ILE ALA SEQRES 61 A 903 SER VAL SER SER ALA ASN ASN ILE ALA LYS TYR ASP VAL SEQRES 62 A 903 GLY GLY PHE PRO GLY PRO LYS CYS PRO PHE HIS ILE ARG SEQRES 63 A 903 GLY ILE LEU THR TYR ASN ARG ALA ILE LYS GLY ASN ILE SEQRES 64 A 903 ASP ALA PRO GLN VAL VAL GLU GLY GLU LYS VAL TYR VAL SEQRES 65 A 903 LEU PRO LEU ARG GLU GLY ASN PRO PHE GLY ASP LYS CYS SEQRES 66 A 903 ILE ALA TRP PRO SER GLY THR GLU ILE THR ASP LEU ILE SEQRES 67 A 903 LYS ASP ASP VAL LEU HIS TRP MET ASP TYR THR VAL LEU SEQRES 68 A 903 LEU GLU LYS THR PHE ILE LYS PRO LEU GLU GLY PHE THR SEQRES 69 A 903 SER ALA ALA LYS LEU ASP TYR GLU LYS LYS ALA SER LEU SEQRES 70 A 903 PHE ASP MET PHE ASP PHE SEQRES 1 T 18 DA DC DA G DG DT DA DA DG DC DA DG DT SEQRES 2 T 18 DC DC DG DC DG SEQRES 1 P 14 DG DC DG DG DA DC DT DG DC DT DT DA DC SEQRES 2 P 14 DC HET TTP A1001 29 HET CA A1002 1 HET CA A1003 1 HET CA A1004 1 HET NA A1005 1 HET NA A1006 1 HET NA A1007 1 HET NA A1008 1 HETNAM TTP THYMIDINE-5'-TRIPHOSPHATE HETNAM CA CALCIUM ION HETNAM NA SODIUM ION FORMUL 4 TTP C10 H17 N2 O14 P3 FORMUL 5 CA 3(CA 2+) FORMUL 8 NA 4(NA 1+) FORMUL 12 HOH *553(H2 O) HELIX 1 1 ASN A 64 GLY A 79 1 16 HELIX 2 2 ASP A 87 TYR A 97 1 11 HELIX 3 3 ASP A 104 ILE A 108 5 5 HELIX 4 4 SER A 163 LYS A 169 1 7 HELIX 5 5 LEU A 170 GLY A 174 5 5 HELIX 6 6 PRO A 179 ASP A 184 1 6 HELIX 7 7 ASN A 193 LYS A 208 1 16 HELIX 8 8 PHE A 221 GLY A 235 1 15 HELIX 9 9 GLY A 235 LYS A 240 1 6 HELIX 10 10 ARG A 241 SER A 243 5 3 HELIX 11 11 ASP A 272 SER A 281 1 10 HELIX 12 12 SER A 289 ASN A 299 1 11 HELIX 13 13 PRO A 308 GLN A 339 1 32 HELIX 14 14 GLN A 339 LYS A 352 1 14 HELIX 15 15 GLN A 354 PHE A 359 5 6 HELIX 16 16 SER A 360 GLN A 376 1 17 HELIX 17 17 SER A 414 ASN A 424 1 11 HELIX 18 18 PRO A 438 ASN A 444 1 7 HELIX 19 19 GLY A 469 LEU A 503 1 35 HELIX 20 20 SER A 523 LYS A 531 1 9 HELIX 21 21 SER A 534 LEU A 570 1 37 HELIX 22 22 ASP A 579 CYS A 609 1 31 HELIX 23 23 ALA A 629 GLY A 637 1 9 HELIX 24 24 GLU A 638 PHE A 641 5 4 HELIX 25 25 ASP A 643 ARG A 658 1 16 HELIX 26 26 ARG A 658 MET A 674 1 17 HELIX 27 27 LEU A 730 LYS A 734 5 5 HELIX 28 28 PRO A 738 GLU A 755 1 18 HELIX 29 29 GLY A 756 PHE A 771 1 16 HELIX 30 30 ARG A 772 LEU A 774 5 3 HELIX 31 31 ASN A 775 ALA A 780 1 6 HELIX 32 32 ILE A 788 LYS A 790 5 3 HELIX 33 33 PRO A 802 LYS A 816 1 15 HELIX 34 34 THR A 855 MET A 866 1 12 HELIX 35 35 ASP A 867 PHE A 876 1 10 HELIX 36 36 PHE A 876 LYS A 888 1 13 HELIX 37 37 SER A 896 PHE A 901 5 6 SHEET 1 A 3 PHE A 4 ILE A 11 0 SHEET 2 A 3 SER A 14 ILE A 20 -1 O SER A 14 N ILE A 11 SHEET 3 A 3 GLU A 26 VAL A 31 -1 O VAL A 31 N ILE A 15 SHEET 1 B 2 SER A 36 HIS A 40 0 SHEET 2 B 2 CYS A 57 LEU A 61 -1 O LYS A 60 N LEU A 37 SHEET 1 C 2 PHE A 50 ASP A 51 0 SHEET 2 C 2 LYS A 378 VAL A 379 1 O VAL A 379 N PHE A 50 SHEET 1 D 6 ILE A 186 PHE A 191 0 SHEET 2 D 6 ARG A 145 LEU A 151 1 N PHE A 146 O ILE A 187 SHEET 3 D 6 ILE A 133 ASP A 140 -1 N ILE A 136 O PHE A 149 SHEET 4 D 6 VAL A 110 VAL A 117 -1 N ASN A 112 O TYR A 139 SHEET 5 D 6 ILE A 212 THR A 214 1 O ILE A 212 N ALA A 111 SHEET 6 D 6 SER A 269 VAL A 270 1 O SER A 269 N LEU A 213 SHEET 1 E 2 ASN A 153 SER A 154 0 SHEET 2 E 2 GLY A 157 ASN A 158 -1 O GLY A 157 N SER A 154 SHEET 1 F 2 THR A 248 ILE A 253 0 SHEET 2 F 2 ARG A 260 LEU A 265 -1 O ILE A 262 N LYS A 251 SHEET 1 G 7 ASN A 402 ARG A 403 0 SHEET 2 G 7 GLY A 700 GLY A 704 -1 O TRP A 702 N ASN A 402 SHEET 3 G 7 ARG A 707 MET A 715 -1 O ARG A 707 N THR A 703 SHEET 4 G 7 MET A 683 ALA A 689 -1 N ILE A 688 O TRP A 713 SHEET 5 G 7 VAL A 407 LEU A 412 -1 N SER A 409 O GLU A 686 SHEET 6 G 7 SER A 624 SER A 628 -1 O VAL A 627 N MET A 408 SHEET 7 G 7 VAL A 617 TYR A 619 -1 N TYR A 619 O TYR A 626 SHEET 1 H 4 ASN A 402 ARG A 403 0 SHEET 2 H 4 GLY A 700 GLY A 704 -1 O TRP A 702 N ASN A 402 SHEET 3 H 4 ARG A 707 MET A 715 -1 O ARG A 707 N THR A 703 SHEET 4 H 4 THR A 718 MET A 728 -1 O MET A 728 N TYR A 708 SHEET 1 I 3 ILE A 430 THR A 433 0 SHEET 2 I 3 MET A 461 TYR A 463 -1 O MET A 462 N ALA A 431 SHEET 3 I 3 SER A 455 CYS A 456 -1 N SER A 455 O TYR A 463 SHEET 1 J 3 SER A 781 SER A 784 0 SHEET 2 J 3 LYS A 829 PRO A 834 -1 O VAL A 830 N SER A 783 SHEET 3 J 3 CYS A 845 PRO A 849 -1 O TRP A 848 N TYR A 831 SHEET 1 K 2 ASP A 792 VAL A 793 0 SHEET 2 K 2 PHE A 796 PRO A 797 -1 O PHE A 796 N VAL A 793 LINK OE2 GLU A 177 NA NA A1007 1555 1555 2.42 LINK OD1 ASP A 192 CA CA A1004 1555 1555 2.69 LINK OD2 ASP A 192 CA CA A1004 1555 1555 2.74 LINK OE2 GLU A 196 CA CA A1004 1555 1555 2.66 LINK OE1 GLU A 196 CA CA A1004 1555 1555 2.83 LINK OD2 ASP A 411 CA CA A1002 1555 1555 2.47 LINK OD1 ASP A 411 CA CA A1002 1555 1555 2.61 LINK OD2 ASP A 411 NA NA A1008 1555 1555 2.43 LINK O LEU A 412 CA CA A1002 1555 1555 2.41 LINK O ASN A 505 CA CA A1003 1555 1555 2.44 LINK OD1 ASN A 507 CA CA A1003 1555 1555 2.98 LINK O LYS A 531 CA CA A1003 1555 1555 2.58 LINK OD1 ASP A 623 CA CA A1002 1555 1555 2.32 LINK OD2 ASP A 623 NA NA A1008 1555 1555 2.52 LINK OE1 GLU A 660 NA NA A1006 1555 1555 3.19 LINK OD2 ASP A 684 NA NA A1006 1555 1555 2.44 LINK O1B TTP A1001 CA CA A1002 1555 1555 2.14 LINK O1A TTP A1001 CA CA A1002 1555 1555 2.21 LINK O2G TTP A1001 CA CA A1002 1555 1555 2.23 LINK O1A TTP A1001 NA NA A1008 1555 1555 2.55 LINK CA CA A1003 O HOH A1516 1555 1555 2.40 LINK CA CA A1003 O HOH A1542 1555 1555 2.41 LINK CA CA A1003 O HOH A1548 1555 1555 3.17 LINK CA CA A1004 O HOH A1101 1555 1555 2.39 LINK CA CA A1004 O HOH A1248 1555 1555 2.43 LINK CA CA A1004 O HOH A1472 1555 1555 2.42 LINK NA NA A1005 O HOH A1556 1555 1555 2.43 LINK NA NA A1006 O HOH A1237 1555 1555 2.43 LINK NA NA A1006 O HOH A1554 1555 1555 2.39 LINK NA NA A1008 O HOH A1214 1555 1555 2.40 SITE 1 AC1 19 ASP A 411 LEU A 412 SER A 414 PHE A 415 SITE 2 AC1 19 TYR A 416 ARG A 482 LYS A 560 ASN A 564 SITE 3 AC1 19 TYR A 567 ASP A 623 CA A1002 NA A1008 SITE 4 AC1 19 HOH A1119 HOH A1197 HOH A1217 HOH A1507 SITE 5 AC1 19 DC P 115 DA T 3 G T 4 SITE 1 AC2 5 ASP A 411 LEU A 412 ASP A 623 TTP A1001 SITE 2 AC2 5 NA A1008 SITE 1 AC3 5 ASN A 505 ASN A 507 LYS A 531 HOH A1516 SITE 2 AC3 5 HOH A1542 SITE 1 AC4 6 ASP A 192 GLU A 196 ASP A 860 HOH A1101 SITE 2 AC4 6 HOH A1248 HOH A1472 SITE 1 AC5 3 GLU A 686 GLU A 716 HOH A1556 SITE 1 AC6 4 GLU A 660 ASP A 684 HOH A1237 HOH A1554 SITE 1 AC7 2 GLU A 172 GLU A 177 SITE 1 AC8 5 ASP A 411 ASP A 623 TTP A1001 CA A1002 SITE 2 AC8 5 HOH A1214 CRYST1 80.977 119.350 127.860 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012349 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008379 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007821 0.00000