HEADER STRUCTURAL PROTEIN 06-MAY-13 4KKQ TITLE CRYSTAL STRUCTURE OF VIBRIO CHOLERAE RBMA (CRYSTAL FORM 1) COMPND MOL_ID: 1; COMPND 2 MOLECULE: RBMA PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE; SOURCE 3 ORGANISM_TAXID: 593588; SOURCE 4 STRAIN: MJ-1236; SOURCE 5 GENE: VCD_003406; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS FN-III, MATRIX PROTEIN, SECRETED, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.SONDERMANN,K.M.GIGLIO REVDAT 4 28-FEB-24 4KKQ 1 REMARK REVDAT 3 10-JUL-13 4KKQ 1 JRNL REVDAT 2 05-JUN-13 4KKQ 1 JRNL REVDAT 1 22-MAY-13 4KKQ 0 JRNL AUTH K.M.GIGLIO,J.C.FONG,F.H.YILDIZ,H.SONDERMANN JRNL TITL STRUCTURAL BASIS FOR BIOFILM FORMATION VIA THE VIBRIO JRNL TITL 2 CHOLERAE MATRIX PROTEIN RBMA. JRNL REF J.BACTERIOL. V. 195 3277 2013 JRNL REFN ISSN 0021-9193 JRNL PMID 23687270 JRNL DOI 10.1128/JB.00374-13 REMARK 2 REMARK 2 RESOLUTION. 2.16 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.16 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 42327 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.750 REMARK 3 FREE R VALUE TEST SET COUNT : 2010 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.5188 - 5.2080 0.99 3095 158 0.1891 0.2063 REMARK 3 2 5.2080 - 4.1345 1.00 2943 151 0.1366 0.1515 REMARK 3 3 4.1345 - 3.6121 0.99 2887 146 0.1577 0.1719 REMARK 3 4 3.6121 - 3.2820 1.00 2890 141 0.1698 0.2017 REMARK 3 5 3.2820 - 3.0468 1.00 2889 147 0.1970 0.2224 REMARK 3 6 3.0468 - 2.8672 1.00 2849 142 0.2043 0.2047 REMARK 3 7 2.8672 - 2.7236 1.00 2867 147 0.2078 0.2852 REMARK 3 8 2.7236 - 2.6050 1.00 2854 140 0.2033 0.2764 REMARK 3 9 2.6050 - 2.5048 1.00 2835 138 0.2113 0.2669 REMARK 3 10 2.5048 - 2.4183 1.00 2865 145 0.2051 0.2441 REMARK 3 11 2.4183 - 2.3427 1.00 2848 139 0.2020 0.2627 REMARK 3 12 2.3427 - 2.2758 1.00 2857 137 0.2082 0.2604 REMARK 3 13 2.2758 - 2.2159 1.00 2820 146 0.2210 0.2602 REMARK 3 14 2.2159 - 2.1600 0.99 2818 133 0.2318 0.3061 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.980 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3573 REMARK 3 ANGLE : 1.036 4846 REMARK 3 CHIRALITY : 0.075 540 REMARK 3 PLANARITY : 0.004 634 REMARK 3 DIHEDRAL : 13.494 1299 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 38:126) REMARK 3 ORIGIN FOR THE GROUP (A): -30.3117 12.2482 -29.4370 REMARK 3 T TENSOR REMARK 3 T11: 0.5808 T22: 0.4209 REMARK 3 T33: 0.3173 T12: -0.1593 REMARK 3 T13: 0.0003 T23: 0.0743 REMARK 3 L TENSOR REMARK 3 L11: 2.2027 L22: 2.1921 REMARK 3 L33: 3.1200 L12: 0.3272 REMARK 3 L13: -0.6760 L23: 0.8771 REMARK 3 S TENSOR REMARK 3 S11: -0.1100 S12: 0.5582 S13: 0.4561 REMARK 3 S21: -0.7003 S22: 0.0464 S23: -0.0807 REMARK 3 S31: -0.7987 S32: 0.2877 S33: 0.0127 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 127:155) REMARK 3 ORIGIN FOR THE GROUP (A): -31.5361 4.9888 -29.7942 REMARK 3 T TENSOR REMARK 3 T11: 0.4363 T22: 0.3825 REMARK 3 T33: 0.3321 T12: -0.1201 REMARK 3 T13: 0.0254 T23: 0.0256 REMARK 3 L TENSOR REMARK 3 L11: 4.3422 L22: 1.4663 REMARK 3 L33: 2.3157 L12: -0.6469 REMARK 3 L13: 0.1976 L23: 0.1351 REMARK 3 S TENSOR REMARK 3 S11: -0.0028 S12: 0.4039 S13: -0.0531 REMARK 3 S21: -0.4513 S22: 0.0108 S23: -0.0752 REMARK 3 S31: -0.3572 S32: 0.1739 S33: 0.0384 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 156:271) REMARK 3 ORIGIN FOR THE GROUP (A): -30.0858 -16.0886 -27.0562 REMARK 3 T TENSOR REMARK 3 T11: 0.2521 T22: 0.3736 REMARK 3 T33: 0.3246 T12: 0.0489 REMARK 3 T13: -0.0017 T23: -0.0519 REMARK 3 L TENSOR REMARK 3 L11: 1.2419 L22: 1.6429 REMARK 3 L33: 2.7833 L12: 0.7300 REMARK 3 L13: -0.0103 L23: 0.2251 REMARK 3 S TENSOR REMARK 3 S11: -0.0796 S12: 0.2120 S13: -0.1866 REMARK 3 S21: -0.0413 S22: 0.1081 S23: -0.2597 REMARK 3 S31: 0.2128 S32: 0.5365 S33: -0.0119 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN B AND RESID 35:109) REMARK 3 ORIGIN FOR THE GROUP (A): -39.9518 -17.8486 -6.5780 REMARK 3 T TENSOR REMARK 3 T11: 0.3446 T22: 0.4508 REMARK 3 T33: 0.2976 T12: 0.0308 REMARK 3 T13: 0.0316 T23: 0.0878 REMARK 3 L TENSOR REMARK 3 L11: 2.0734 L22: 2.9379 REMARK 3 L33: 2.6993 L12: 0.0100 REMARK 3 L13: 1.1012 L23: 0.4667 REMARK 3 S TENSOR REMARK 3 S11: -0.0747 S12: -0.6757 S13: -0.3062 REMARK 3 S21: 0.3309 S22: 0.0163 S23: 0.1993 REMARK 3 S31: 0.4274 S32: -0.2316 S33: 0.0269 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN B AND RESID 110:114) REMARK 3 ORIGIN FOR THE GROUP (A): -46.7825 -25.1614 -2.1655 REMARK 3 T TENSOR REMARK 3 T11: 0.7810 T22: 0.7843 REMARK 3 T33: 0.6545 T12: -0.1232 REMARK 3 T13: 0.0881 T23: 0.1994 REMARK 3 L TENSOR REMARK 3 L11: 1.9786 L22: 4.9972 REMARK 3 L33: 7.8827 L12: 0.5154 REMARK 3 L13: -1.0980 L23: -0.2792 REMARK 3 S TENSOR REMARK 3 S11: 0.0677 S12: -1.1620 S13: -0.2643 REMARK 3 S21: 0.5523 S22: 0.3356 S23: 1.3520 REMARK 3 S31: 0.4734 S32: -1.2569 S33: -0.4325 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN B AND RESID 115:156) REMARK 3 ORIGIN FOR THE GROUP (A): -31.5212 -13.7550 -7.5166 REMARK 3 T TENSOR REMARK 3 T11: 0.3207 T22: 0.4535 REMARK 3 T33: 0.3129 T12: 0.0729 REMARK 3 T13: -0.0180 T23: 0.0576 REMARK 3 L TENSOR REMARK 3 L11: 3.2776 L22: 1.4285 REMARK 3 L33: 2.3174 L12: 0.5363 REMARK 3 L13: 0.2638 L23: 0.6842 REMARK 3 S TENSOR REMARK 3 S11: 0.0619 S12: -0.1521 S13: 0.0140 REMARK 3 S21: 0.1422 S22: -0.0103 S23: -0.1554 REMARK 3 S31: 0.3181 S32: 0.3983 S33: -0.0505 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN B AND RESID 157:271) REMARK 3 ORIGIN FOR THE GROUP (A): -26.9023 7.8157 -9.2592 REMARK 3 T TENSOR REMARK 3 T11: 0.2614 T22: 0.3135 REMARK 3 T33: 0.2885 T12: -0.0534 REMARK 3 T13: 0.0043 T23: -0.0208 REMARK 3 L TENSOR REMARK 3 L11: 0.9862 L22: 1.2836 REMARK 3 L33: 2.0097 L12: 0.1753 REMARK 3 L13: -0.0671 L23: 0.0647 REMARK 3 S TENSOR REMARK 3 S11: -0.0868 S12: -0.0636 S13: -0.0957 REMARK 3 S21: -0.0734 S22: 0.0271 S23: -0.1631 REMARK 3 S31: -0.1568 S32: 0.3842 S33: 0.0611 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4KKQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000079460. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9771 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45502 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.160 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.16 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS, 10% POLYETHYLENE REMARK 280 GLYCOL 10,000, 25% XYLITOL, PH 6.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.17600 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 58.63350 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 58.63350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.08800 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 58.63350 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 58.63350 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 84.26400 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 58.63350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 58.63350 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 28.08800 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 58.63350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 58.63350 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 84.26400 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 56.17600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 328 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 461 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 31 REMARK 465 VAL A 32 REMARK 465 ASP A 33 REMARK 465 CYS A 34 REMARK 465 GLU A 35 REMARK 465 LEU A 36 REMARK 465 GLN A 37 REMARK 465 GLN A 100 REMARK 465 GLN A 101 REMARK 465 GLU A 102 REMARK 465 SER A 103 REMARK 465 ASP A 104 REMARK 465 ALA A 105 REMARK 465 LEU A 106 REMARK 465 THR A 107 REMARK 465 ASP A 108 REMARK 465 GLU B 31 REMARK 465 VAL B 32 REMARK 465 ASP B 33 REMARK 465 CYS B 34 REMARK 465 GLN B 101 REMARK 465 GLU B 102 REMARK 465 SER B 103 REMARK 465 ASP B 104 REMARK 465 ALA B 105 REMARK 465 LEU B 106 REMARK 465 THR B 107 REMARK 465 ASP B 108 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 ND2 ASN B 54 O HOH B 466 7555 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 98 74.79 -62.34 REMARK 500 ASN A 156 58.96 -111.99 REMARK 500 LEU B 36 74.06 45.62 REMARK 500 ASN B 49 15.78 -143.40 REMARK 500 ALA B 99 -130.08 -143.53 REMARK 500 ARG B 110 156.44 176.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4KKP RELATED DB: PDB REMARK 900 RELATED ID: 4KKR RELATED DB: PDB DBREF 4KKQ A 31 271 UNP C3NSJ9 C3NSJ9_VIBCJ 31 271 DBREF 4KKQ B 31 271 UNP C3NSJ9 C3NSJ9_VIBCJ 31 271 SEQRES 1 A 241 GLU VAL ASP CYS GLU LEU GLN PRO VAL ILE GLU ALA ASN SEQRES 2 A 241 LEU SER LEU ASN GLN ASN GLN LEU ALA SER ASN GLY GLY SEQRES 3 A 241 TYR ILE SER SER GLN LEU GLY ILE ARG ASN GLU SER CYS SEQRES 4 A 241 GLU THR VAL LYS PHE LYS TYR TRP LEU SER ILE LYS GLY SEQRES 5 A 241 PRO GLU GLY ILE TYR PHE PRO ALA LYS ALA VAL VAL GLY SEQRES 6 A 241 VAL ASP THR ALA GLN GLN GLU SER ASP ALA LEU THR ASP SEQRES 7 A 241 GLY ARG MET LEU ASN VAL THR ARG GLY PHE TRP VAL PRO SEQRES 8 A 241 GLU TYR MET ALA ASP GLY LYS TYR THR VAL SER LEU GLN SEQRES 9 A 241 VAL VAL ALA GLU ASN GLY LYS VAL PHE LYS ALA ASN GLN SEQRES 10 A 241 GLU PHE VAL LYS GLY VAL ASP LEU ASN SER LEU PRO GLU SEQRES 11 A 241 LEU ASN GLY LEU THR ILE ASP ILE LYS ASN GLN PHE GLY SEQRES 12 A 241 ILE ASN SER VAL GLU SER THR GLY GLY PHE VAL PRO PHE SEQRES 13 A 241 THR VAL ASP LEU ASN ASN GLY ARG GLU GLY GLU ALA ASN SEQRES 14 A 241 VAL GLU PHE TRP MET THR ALA VAL GLY PRO ASP GLY LEU SEQRES 15 A 241 ILE ILE PRO VAL ASN ALA ARG GLU LYS TRP VAL ILE ALA SEQRES 16 A 241 SER GLY ASP THR TYR SER LYS VAL ARG GLY ILE ASN PHE SEQRES 17 A 241 ASP LYS SER TYR PRO ALA GLY GLU TYR THR ILE ASN ALA SEQRES 18 A 241 GLN VAL VAL ASP ILE VAL SER GLY GLU ARG VAL GLU GLN SEQRES 19 A 241 SER MET THR VAL VAL LYS LYS SEQRES 1 B 241 GLU VAL ASP CYS GLU LEU GLN PRO VAL ILE GLU ALA ASN SEQRES 2 B 241 LEU SER LEU ASN GLN ASN GLN LEU ALA SER ASN GLY GLY SEQRES 3 B 241 TYR ILE SER SER GLN LEU GLY ILE ARG ASN GLU SER CYS SEQRES 4 B 241 GLU THR VAL LYS PHE LYS TYR TRP LEU SER ILE LYS GLY SEQRES 5 B 241 PRO GLU GLY ILE TYR PHE PRO ALA LYS ALA VAL VAL GLY SEQRES 6 B 241 VAL ASP THR ALA GLN GLN GLU SER ASP ALA LEU THR ASP SEQRES 7 B 241 GLY ARG MET LEU ASN VAL THR ARG GLY PHE TRP VAL PRO SEQRES 8 B 241 GLU TYR MET ALA ASP GLY LYS TYR THR VAL SER LEU GLN SEQRES 9 B 241 VAL VAL ALA GLU ASN GLY LYS VAL PHE LYS ALA ASN GLN SEQRES 10 B 241 GLU PHE VAL LYS GLY VAL ASP LEU ASN SER LEU PRO GLU SEQRES 11 B 241 LEU ASN GLY LEU THR ILE ASP ILE LYS ASN GLN PHE GLY SEQRES 12 B 241 ILE ASN SER VAL GLU SER THR GLY GLY PHE VAL PRO PHE SEQRES 13 B 241 THR VAL ASP LEU ASN ASN GLY ARG GLU GLY GLU ALA ASN SEQRES 14 B 241 VAL GLU PHE TRP MET THR ALA VAL GLY PRO ASP GLY LEU SEQRES 15 B 241 ILE ILE PRO VAL ASN ALA ARG GLU LYS TRP VAL ILE ALA SEQRES 16 B 241 SER GLY ASP THR TYR SER LYS VAL ARG GLY ILE ASN PHE SEQRES 17 B 241 ASP LYS SER TYR PRO ALA GLY GLU TYR THR ILE ASN ALA SEQRES 18 B 241 GLN VAL VAL ASP ILE VAL SER GLY GLU ARG VAL GLU GLN SEQRES 19 B 241 SER MET THR VAL VAL LYS LYS FORMUL 3 HOH *322(H2 O) HELIX 1 1 PRO A 209 GLY A 211 5 3 HELIX 2 2 PRO B 209 GLY B 211 5 3 SHEET 1 A 3 GLU A 41 LEU A 46 0 SHEET 2 A 3 GLY A 56 ARG A 65 -1 O GLY A 63 N ASN A 43 SHEET 3 A 3 MET A 111 VAL A 120 -1 O VAL A 114 N LEU A 62 SHEET 1 B 5 GLN A 50 LEU A 51 0 SHEET 2 B 5 VAL A 142 LYS A 151 1 O VAL A 150 N LEU A 51 SHEET 3 B 5 GLY A 127 ALA A 137 -1 N VAL A 131 O GLN A 147 SHEET 4 B 5 LYS A 73 LYS A 81 -1 N SER A 79 O SER A 132 SHEET 5 B 5 TYR A 87 ASP A 97 -1 O VAL A 96 N PHE A 74 SHEET 1 C 4 GLU A 160 LEU A 161 0 SHEET 2 C 4 LEU A 164 ASN A 170 -1 O LEU A 164 N LEU A 161 SHEET 3 C 4 GLY A 182 ASN A 192 -1 O ASP A 189 N ASP A 167 SHEET 4 C 4 THR A 229 PHE A 238 -1 O PHE A 238 N GLY A 182 SHEET 1 D 5 SER A 176 VAL A 177 0 SHEET 2 D 5 ARG A 261 LYS A 270 1 O VAL A 269 N VAL A 177 SHEET 3 D 5 GLY A 245 ASP A 255 -1 N ILE A 249 O MET A 266 SHEET 4 D 5 ALA A 198 VAL A 207 -1 N THR A 205 O ASN A 250 SHEET 5 D 5 ILE A 213 ILE A 224 -1 O ILE A 224 N ALA A 198 SHEET 1 E 3 GLU B 41 LEU B 46 0 SHEET 2 E 3 GLY B 56 ASN B 66 -1 O GLY B 63 N ASN B 43 SHEET 3 E 3 ARG B 110 VAL B 120 -1 O VAL B 114 N LEU B 62 SHEET 1 F 5 GLN B 50 LEU B 51 0 SHEET 2 F 5 VAL B 142 LYS B 151 1 O VAL B 150 N LEU B 51 SHEET 3 F 5 GLY B 127 ALA B 137 -1 N VAL B 131 O GLN B 147 SHEET 4 F 5 VAL B 72 LYS B 81 -1 N SER B 79 O SER B 132 SHEET 5 F 5 TYR B 87 THR B 98 -1 O VAL B 96 N PHE B 74 SHEET 1 G 4 GLU B 160 LEU B 161 0 SHEET 2 G 4 LEU B 164 ASN B 170 -1 O LEU B 164 N LEU B 161 SHEET 3 G 4 GLY B 182 ASN B 192 -1 O ASP B 189 N ASP B 167 SHEET 4 G 4 THR B 229 PHE B 238 -1 O PHE B 238 N GLY B 182 SHEET 1 H 5 SER B 176 VAL B 177 0 SHEET 2 H 5 ARG B 261 LYS B 270 1 O VAL B 269 N VAL B 177 SHEET 3 H 5 GLY B 245 ASP B 255 -1 N ILE B 249 O MET B 266 SHEET 4 H 5 ALA B 198 VAL B 207 -1 N THR B 205 O ASN B 250 SHEET 5 H 5 ILE B 213 ILE B 224 -1 O ILE B 224 N ALA B 198 CISPEP 1 THR B 98 ALA B 99 0 3.01 CRYST1 117.267 117.267 112.352 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008528 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008528 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008901 0.00000