data_4KLP # _entry.id 4KLP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4KLP NDB NA2409 RCSB RCSB079495 WWPDB D_1000079495 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2013-09-04 _pdbx_database_PDB_obs_spr.pdb_id 4LVS _pdbx_database_PDB_obs_spr.replace_pdb_id 4KLP _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4KLD . unspecified PDB 4KLE . unspecified PDB 4KLF . unspecified PDB 4KLG . unspecified PDB 4KLH . unspecified PDB 4KLI . unspecified PDB 4KLJ . unspecified PDB 4KLL . unspecified PDB 4KLM . unspecified PDB 4KLO . unspecified PDB 4KLQ . unspecified PDB 4KLS . unspecified PDB 4KLT . unspecified PDB 4KLU . unspecified # _pdbx_database_status.entry_id 4KLP _pdbx_database_status.status_code OBS _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-05-07 _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Freudenthal, B.D.' 1 'Beard, W.A.' 2 'Shock, D.D.' 3 'Wilson, S.H.' 4 # _citation.id primary _citation.title 'Observing a DNA polymerase choose right from wrong.' _citation.journal_abbrev 'Cell(Cambridge,Mass.)' _citation.journal_volume 154 _citation.page_first 157 _citation.page_last 168 _citation.year 2013 _citation.journal_id_ASTM CELLB5 _citation.country US _citation.journal_id_ISSN 0092-8674 _citation.journal_id_CSD 0998 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23827680 _citation.pdbx_database_id_DOI 10.1016/j.cell.2013.05.048 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Freudenthal, B.D.' 1 primary 'Beard, W.A.' 2 primary 'Shock, D.D.' 3 primary 'Wilson, S.H.' 4 # _cell.length_a 54.982 _cell.length_b 78.506 _cell.length_c 55.138 _cell.angle_alpha 90.000 _cell.angle_beta 113.240 _cell.angle_gamma 90.000 _cell.length_a_esd 0.001 _cell.length_b_esd 0.001 _cell.length_c_esd 0.001 _cell.angle_alpha_esd 0.0 _cell.angle_beta_esd 0.001 _cell.angle_gamma_esd 0.0 _cell.entry_id 4KLP _cell.pdbx_unique_axis ? _cell.Z_PDB 2 # _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.entry_id 4KLP _symmetry.Int_Tables_number 4 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase beta' 38241.672 1 '2.7.7.7, 4.2.99.-' ? ? ? 2 polymer syn "5'-D(P*GP*TP*CP*GP*G)-3'" 1536.035 1 ? ? ? ? 3 polymer syn "5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'" 3061.004 1 ? ? ? ? 4 polymer syn "5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*TP*AP*TP*CP*AP*GP*C)-3'" 4884.168 1 ? ? ? ? 5 non-polymer syn ;2'-DEOXYADENOSINE 5'-TRIPHOSPHATE ; 491.182 1 ? ? ? ? 6 non-polymer syn 'MANGANESE (II) ION' 54.938 6 ? ? ? ? 7 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 8 water nat water 18.015 165 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; A ? 2 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DG)(DG)' GTCGG D ? 3 polydeoxyribonucleotide no no '(DG)(DC)(DT)(DG)(DA)(DT)(DG)(DC)(DG)(DC)' GCTGATGCGC P ? 4 polydeoxyribonucleotide no no '(DC)(DC)(DG)(DA)(DC)(DG)(DG)(DC)(DG)(DT)(DA)(DT)(DC)(DA)(DG)(DC)' CCGACGGCGTATCAGC T ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 LYS n 1 4 ARG n 1 5 LYS n 1 6 ALA n 1 7 PRO n 1 8 GLN n 1 9 GLU n 1 10 THR n 1 11 LEU n 1 12 ASN n 1 13 GLY n 1 14 GLY n 1 15 ILE n 1 16 THR n 1 17 ASP n 1 18 MET n 1 19 LEU n 1 20 THR n 1 21 GLU n 1 22 LEU n 1 23 ALA n 1 24 ASN n 1 25 PHE n 1 26 GLU n 1 27 LYS n 1 28 ASN n 1 29 VAL n 1 30 SER n 1 31 GLN n 1 32 ALA n 1 33 ILE n 1 34 HIS n 1 35 LYS n 1 36 TYR n 1 37 ASN n 1 38 ALA n 1 39 TYR n 1 40 ARG n 1 41 LYS n 1 42 ALA n 1 43 ALA n 1 44 SER n 1 45 VAL n 1 46 ILE n 1 47 ALA n 1 48 LYS n 1 49 TYR n 1 50 PRO n 1 51 HIS n 1 52 LYS n 1 53 ILE n 1 54 LYS n 1 55 SER n 1 56 GLY n 1 57 ALA n 1 58 GLU n 1 59 ALA n 1 60 LYS n 1 61 LYS n 1 62 LEU n 1 63 PRO n 1 64 GLY n 1 65 VAL n 1 66 GLY n 1 67 THR n 1 68 LYS n 1 69 ILE n 1 70 ALA n 1 71 GLU n 1 72 LYS n 1 73 ILE n 1 74 ASP n 1 75 GLU n 1 76 PHE n 1 77 LEU n 1 78 ALA n 1 79 THR n 1 80 GLY n 1 81 LYS n 1 82 LEU n 1 83 ARG n 1 84 LYS n 1 85 LEU n 1 86 GLU n 1 87 LYS n 1 88 ILE n 1 89 ARG n 1 90 GLN n 1 91 ASP n 1 92 ASP n 1 93 THR n 1 94 SER n 1 95 SER n 1 96 SER n 1 97 ILE n 1 98 ASN n 1 99 PHE n 1 100 LEU n 1 101 THR n 1 102 ARG n 1 103 VAL n 1 104 SER n 1 105 GLY n 1 106 ILE n 1 107 GLY n 1 108 PRO n 1 109 SER n 1 110 ALA n 1 111 ALA n 1 112 ARG n 1 113 LYS n 1 114 PHE n 1 115 VAL n 1 116 ASP n 1 117 GLU n 1 118 GLY n 1 119 ILE n 1 120 LYS n 1 121 THR n 1 122 LEU n 1 123 GLU n 1 124 ASP n 1 125 LEU n 1 126 ARG n 1 127 LYS n 1 128 ASN n 1 129 GLU n 1 130 ASP n 1 131 LYS n 1 132 LEU n 1 133 ASN n 1 134 HIS n 1 135 HIS n 1 136 GLN n 1 137 ARG n 1 138 ILE n 1 139 GLY n 1 140 LEU n 1 141 LYS n 1 142 TYR n 1 143 PHE n 1 144 GLY n 1 145 ASP n 1 146 PHE n 1 147 GLU n 1 148 LYS n 1 149 ARG n 1 150 ILE n 1 151 PRO n 1 152 ARG n 1 153 GLU n 1 154 GLU n 1 155 MET n 1 156 LEU n 1 157 GLN n 1 158 MET n 1 159 GLN n 1 160 ASP n 1 161 ILE n 1 162 VAL n 1 163 LEU n 1 164 ASN n 1 165 GLU n 1 166 VAL n 1 167 LYS n 1 168 LYS n 1 169 VAL n 1 170 ASP n 1 171 SER n 1 172 GLU n 1 173 TYR n 1 174 ILE n 1 175 ALA n 1 176 THR n 1 177 VAL n 1 178 CYS n 1 179 GLY n 1 180 SER n 1 181 PHE n 1 182 ARG n 1 183 ARG n 1 184 GLY n 1 185 ALA n 1 186 GLU n 1 187 SER n 1 188 SER n 1 189 GLY n 1 190 ASP n 1 191 MET n 1 192 ASP n 1 193 VAL n 1 194 LEU n 1 195 LEU n 1 196 THR n 1 197 HIS n 1 198 PRO n 1 199 SER n 1 200 PHE n 1 201 THR n 1 202 SER n 1 203 GLU n 1 204 SER n 1 205 THR n 1 206 LYS n 1 207 GLN n 1 208 PRO n 1 209 LYS n 1 210 LEU n 1 211 LEU n 1 212 HIS n 1 213 GLN n 1 214 VAL n 1 215 VAL n 1 216 GLU n 1 217 GLN n 1 218 LEU n 1 219 GLN n 1 220 LYS n 1 221 VAL n 1 222 HIS n 1 223 PHE n 1 224 ILE n 1 225 THR n 1 226 ASP n 1 227 THR n 1 228 LEU n 1 229 SER n 1 230 LYS n 1 231 GLY n 1 232 GLU n 1 233 THR n 1 234 LYS n 1 235 PHE n 1 236 MET n 1 237 GLY n 1 238 VAL n 1 239 CYS n 1 240 GLN n 1 241 LEU n 1 242 PRO n 1 243 SER n 1 244 LYS n 1 245 ASN n 1 246 ASP n 1 247 GLU n 1 248 LYS n 1 249 GLU n 1 250 TYR n 1 251 PRO n 1 252 HIS n 1 253 ARG n 1 254 ARG n 1 255 ILE n 1 256 ASP n 1 257 ILE n 1 258 ARG n 1 259 LEU n 1 260 ILE n 1 261 PRO n 1 262 LYS n 1 263 ASP n 1 264 GLN n 1 265 TYR n 1 266 TYR n 1 267 CYS n 1 268 GLY n 1 269 VAL n 1 270 LEU n 1 271 TYR n 1 272 PHE n 1 273 THR n 1 274 GLY n 1 275 SER n 1 276 ASP n 1 277 ILE n 1 278 PHE n 1 279 ASN n 1 280 LYS n 1 281 ASN n 1 282 MET n 1 283 ARG n 1 284 ALA n 1 285 HIS n 1 286 ALA n 1 287 LEU n 1 288 GLU n 1 289 LYS n 1 290 GLY n 1 291 PHE n 1 292 THR n 1 293 ILE n 1 294 ASN n 1 295 GLU n 1 296 TYR n 1 297 THR n 1 298 ILE n 1 299 ARG n 1 300 PRO n 1 301 LEU n 1 302 GLY n 1 303 VAL n 1 304 THR n 1 305 GLY n 1 306 VAL n 1 307 ALA n 1 308 GLY n 1 309 GLU n 1 310 PRO n 1 311 LEU n 1 312 PRO n 1 313 VAL n 1 314 ASP n 1 315 SER n 1 316 GLU n 1 317 LYS n 1 318 ASP n 1 319 ILE n 1 320 PHE n 1 321 ASP n 1 322 TYR n 1 323 ILE n 1 324 GLN n 1 325 TRP n 1 326 LYS n 1 327 TYR n 1 328 ARG n 1 329 GLU n 1 330 PRO n 1 331 LYS n 1 332 ASP n 1 333 ARG n 1 334 SER n 1 335 GLU n 2 1 DG n 2 2 DT n 2 3 DC n 2 4 DG n 2 5 DG n 3 1 DG n 3 2 DC n 3 3 DT n 3 4 DG n 3 5 DA n 3 6 DT n 3 7 DG n 3 8 DC n 3 9 DG n 3 10 DC n 4 1 DC n 4 2 DC n 4 3 DG n 4 4 DA n 4 5 DC n 4 6 DG n 4 7 DG n 4 8 DC n 4 9 DG n 4 10 DT n 4 11 DA n 4 12 DT n 4 13 DC n 4 14 DA n 4 15 DG n 4 16 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Polb _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain Tap56 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pWL11 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DPOLB_HUMAN P06746 1 ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; 1 ? 2 PDB 4KLP 4KLP 2 GTCGG 1 ? 3 PDB 4KLP 4KLP 3 GCTGATGCGC 1 ? 4 PDB 4KLP 4KLP 4 CCGACGGCGTATCAGC 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4KLP A 1 ? 335 ? P06746 1 ? 335 ? 1 335 2 2 4KLP D 1 ? 5 ? 4KLP 1 ? 5 ? 1 5 3 3 4KLP P 1 ? 10 ? 4KLP 1 ? 10 ? 1 10 4 4 4KLP T 1 ? 16 ? 4KLP 1 ? 16 ? 1 16 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 DTP non-polymer . ;2'-DEOXYADENOSINE 5'-TRIPHOSPHATE ; ? 'C10 H16 N5 O12 P3' 491.182 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4KLP _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.29 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 46.32 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.temp 291 _exptl_crystal_grow.pdbx_details '50 mM imidazole, 350 mM sodium chloride, 17% PEG3350, pH 8.0, VAPOR DIFFUSION, temperature 291K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2012-10-07 _diffrn_detector.details 'vertical focusing mirrors' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Rosenbaum-Rock double-crystal Si(111)' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_wavelength_list 1.00 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID # _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 2.000 _reflns.number_obs 26880 _reflns.number_all 29102 _reflns.percent_possible_obs 93.0 _reflns.pdbx_Rmerge_I_obs 0.058 _reflns.pdbx_Rsym_value 0.058 _reflns.pdbx_redundancy 3.5 _reflns.entry_id 4KLP _reflns.pdbx_netI_over_sigmaI 13.600 _reflns.pdbx_chi_squared 1.089 _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.03 _reflns_shell.percent_possible_all 97.8 _reflns_shell.Rmerge_I_obs 0.405 _reflns_shell.pdbx_Rsym_value 0.405 _reflns_shell.meanI_over_sigI_obs 2.518 _reflns_shell.pdbx_redundancy 3.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4KLP _refine.ls_d_res_high 2.002 _refine.ls_d_res_low 39.674 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 84.94 _refine.ls_number_reflns_obs 26880 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2191 _refine.ls_R_factor_R_work 0.2159 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2806 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.99 _refine.ls_number_reflns_R_free 1290 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 39.4888 _refine.solvent_model_param_bsol 33.0260 _refine.solvent_model_param_ksol 0.3470 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.8710 _refine.aniso_B[2][2] -2.7567 _refine.aniso_B[3][3] 3.6276 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 4.4423 _refine.aniso_B[2][3] -0.0000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.2600 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB ENTRY 3C2M' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.7752 _refine.B_iso_max 111.040 _refine.B_iso_min 11.810 _refine.pdbx_overall_phase_error 29.5600 _refine.occupancy_max 1.000 _refine.occupancy_min 0.010 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2598 _refine_hist.pdbx_number_atoms_nucleic_acid 633 _refine_hist.pdbx_number_atoms_ligand 38 _refine_hist.number_atoms_solvent 165 _refine_hist.number_atoms_total 3434 _refine_hist.d_res_high 2.002 _refine_hist.d_res_low 39.674 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 3466 0.014 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 4816 1.178 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 521 0.069 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 513 0.004 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 1355 22.631 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 2.002 2.0427 17 68.0 2208 . 0.2891 0.3415 . 110 . 2318 . . 'X-RAY DIFFRACTION' 2.0427 2.0871 17 76.0 2390 . 0.3218 0.3942 . 127 . 2517 . . 'X-RAY DIFFRACTION' 2.0871 2.1357 17 85.0 2705 . 0.2750 0.3127 . 140 . 2845 . . 'X-RAY DIFFRACTION' 2.1357 2.1891 17 89.0 2860 . 0.2682 0.3289 . 144 . 3004 . . 'X-RAY DIFFRACTION' 2.1891 2.2483 17 46.0 1475 . 0.3482 0.5285 . 81 . 1556 . . 'X-RAY DIFFRACTION' 2.2483 2.3144 17 50.0 1583 . 0.3395 0.3882 . 82 . 1665 . . 'X-RAY DIFFRACTION' 2.3144 2.3891 17 94.0 3016 . 0.2311 0.3034 . 168 . 3184 . . 'X-RAY DIFFRACTION' 2.3891 2.4745 17 95.0 3025 . 0.2322 0.2778 . 164 . 3189 . . 'X-RAY DIFFRACTION' 2.4745 2.5735 17 95.0 3008 . 0.2475 0.3331 . 162 . 3170 . . 'X-RAY DIFFRACTION' 2.5735 2.6906 17 96.0 3050 . 0.2420 0.3466 . 161 . 3211 . . 'X-RAY DIFFRACTION' 2.6906 2.8325 17 96.0 3069 . 0.2310 0.3375 . 167 . 3236 . . 'X-RAY DIFFRACTION' 2.8325 3.0099 17 97.0 3103 . 0.2304 0.2617 . 162 . 3265 . . 'X-RAY DIFFRACTION' 3.0099 3.2422 17 97.0 3071 . 0.2166 0.2989 . 156 . 3227 . . 'X-RAY DIFFRACTION' 3.2422 3.5682 17 96.0 3070 . 0.2019 0.2475 . 168 . 3238 . . 'X-RAY DIFFRACTION' 3.5682 4.0841 17 69.0 2190 . 0.1766 0.2341 . 119 . 2309 . . 'X-RAY DIFFRACTION' 4.0841 5.1438 17 98.0 3142 . 0.1621 0.2325 . 154 . 3296 . . 'X-RAY DIFFRACTION' 5.1438 39.6817 17 97.0 3118 . 0.1968 0.2355 . 157 . 3275 . . 'X-RAY DIFFRACTION' # _struct.entry_id 4KLP _struct.title 'DNA polymerase beta mismatched substrate complex with Mn2+, 2.5 min' _struct.pdbx_descriptor 'DNA polymerase beta (E.C.2.7.7.7, 4.2.99.-)/DNA complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4KLP _struct_keywords.text 'DNA polymerase, TRANSFERASE, LYASE-DNA complex' _struct_keywords.pdbx_keywords 'TRANSFERASE, LYASE/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 6 ? I N N 7 ? J N N 7 ? K N N 6 ? L N N 6 ? M N N 6 ? N N N 8 ? O N N 8 ? P N N 8 ? Q N N 8 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 12 ? VAL A 29 ? ASN A 12 VAL A 29 1 ? 18 HELX_P HELX_P2 2 ALA A 32 ? TYR A 49 ? ALA A 32 TYR A 49 1 ? 18 HELX_P HELX_P3 3 SER A 55 ? LYS A 61 ? SER A 55 LYS A 61 1 ? 7 HELX_P HELX_P4 4 GLY A 66 ? GLY A 80 ? GLY A 66 GLY A 80 1 ? 15 HELX_P HELX_P5 5 LEU A 82 ? ASP A 91 ? LEU A 82 ASP A 91 1 ? 10 HELX_P HELX_P6 6 ASP A 91 ? THR A 101 ? ASP A 91 THR A 101 1 ? 11 HELX_P HELX_P7 7 GLY A 107 ? GLU A 117 ? GLY A 107 GLU A 117 1 ? 11 HELX_P HELX_P8 8 THR A 121 ? ASN A 128 ? THR A 121 ASN A 128 1 ? 8 HELX_P HELX_P9 9 GLU A 129 ? LEU A 132 ? GLU A 129 LEU A 132 5 ? 4 HELX_P HELX_P10 10 ASN A 133 ? TYR A 142 ? ASN A 133 TYR A 142 1 ? 10 HELX_P HELX_P11 11 TYR A 142 ? LYS A 148 ? TYR A 142 LYS A 148 1 ? 7 HELX_P HELX_P12 12 ARG A 152 ? ASP A 170 ? ARG A 152 ASP A 170 1 ? 19 HELX_P HELX_P13 13 GLY A 179 ? ARG A 182 ? GLY A 179 ARG A 182 5 ? 4 HELX_P HELX_P14 14 LYS A 209 ? VAL A 221 ? LYS A 209 VAL A 221 1 ? 13 HELX_P HELX_P15 15 PRO A 261 ? ASP A 263 ? PRO A 261 ASP A 263 5 ? 3 HELX_P HELX_P16 16 GLN A 264 ? GLY A 274 ? GLN A 264 GLY A 274 1 ? 11 HELX_P HELX_P17 17 SER A 275 ? GLU A 288 ? SER A 275 GLU A 288 1 ? 14 HELX_P HELX_P18 18 SER A 315 ? GLN A 324 ? SER A 315 GLN A 324 1 ? 10 HELX_P HELX_P19 19 GLU A 329 ? ARG A 333 ? GLU A 329 ARG A 333 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? M MN . MN ? ? ? 1_555 Q HOH . O ? ? T MN 102 T HOH 220 1_555 ? ? ? ? ? ? ? 1.937 ? metalc2 metalc ? ? E DTP . O2G ? ? ? 1_555 G MN . MN ? ? A DTP 401 A MN 403 1_555 ? ? ? ? ? ? ? 2.019 ? metalc3 metalc ? ? A ASP 190 OD1 ? ? ? 1_555 G MN . MN ? ? A ASP 190 A MN 403 1_555 ? ? ? ? ? ? ? 2.032 ? metalc4 metalc ? ? H MN . MN ? ? ? 1_555 N HOH . O ? ? A MN 404 A HOH 621 1_555 ? ? ? ? ? ? ? 2.096 ? metalc5 metalc ? ? A ASP 192 OD1 ? ? ? 1_555 F MN . MN ? ? A ASP 192 A MN 402 1_555 ? ? ? ? ? ? ? 2.132 ? metalc6 metalc ? ? A ASP 192 OD2 ? ? ? 1_555 G MN . MN ? ? A ASP 192 A MN 403 1_555 ? ? ? ? ? ? ? 2.144 ? metalc7 metalc ? ? A ASP 190 OD2 ? ? ? 1_555 F MN . MN ? ? A ASP 190 A MN 402 1_555 ? ? ? ? ? ? ? 2.178 ? metalc8 metalc ? ? E DTP . O2B ? ? ? 1_555 G MN . MN ? ? A DTP 401 A MN 403 1_555 ? ? ? ? ? ? ? 2.182 ? metalc9 metalc ? ? A ASP 256 OD2 ? ? ? 1_555 F MN . MN ? ? A ASP 256 A MN 402 1_555 ? ? ? ? ? ? ? 2.203 ? metalc10 metalc ? ? H MN . MN ? ? ? 1_555 N HOH . O ? ? A MN 404 A HOH 620 1_555 ? ? ? ? ? ? ? 2.216 ? metalc11 metalc ? ? H MN . MN ? ? ? 1_555 N HOH . O ? ? A MN 404 A HOH 622 1_555 ? ? ? ? ? ? ? 2.234 ? metalc12 metalc ? ? H MN . MN ? ? ? 1_555 N HOH . O ? ? A MN 404 A HOH 619 1_555 ? ? ? ? ? ? ? 2.250 ? metalc13 metalc ? ? E DTP . O2A ? ? ? 1_555 G MN . MN ? ? A DTP 401 A MN 403 1_555 ? ? ? ? ? ? ? 2.268 ? metalc14 metalc ? ? A LEU 62 O ? ? ? 1_555 J NA . NA ? ? A LEU 62 A NA 406 1_555 ? ? ? ? ? ? ? 2.276 ? metalc15 metalc ? ? E DTP . O2A ? ? ? 1_555 F MN . MN ? ? A DTP 401 A MN 402 1_555 ? ? ? ? ? ? ? 2.290 ? metalc16 metalc ? ? A VAL 65 O ? ? ? 1_555 J NA . NA ? ? A VAL 65 A NA 406 1_555 ? ? ? ? ? ? ? 2.326 ? metalc17 metalc ? ? G MN . MN ? ? ? 1_555 N HOH . O ? ? A MN 403 A HOH 503 1_555 ? ? ? ? ? ? ? 2.343 ? metalc18 metalc ? ? F MN . MN ? ? ? 1_555 P HOH . O ? ? A MN 402 P HOH 205 1_555 ? ? ? ? ? ? ? 2.355 ? metalc19 metalc ? ? F MN . MN ? ? ? 1_555 N HOH . O ? ? A MN 402 A HOH 524 1_555 ? ? ? ? ? ? ? 2.357 ? metalc20 metalc ? ? A THR 101 O ? ? ? 1_555 I NA . NA ? ? A THR 101 A NA 405 1_555 ? ? ? ? ? ? ? 2.359 ? metalc21 metalc ? ? C DG 9 OP1 ? ? ? 1_555 I NA . NA ? ? P DG 9 A NA 405 1_555 ? ? ? ? ? ? ? 2.431 ? metalc22 metalc ? ? J NA . NA ? ? ? 1_555 N HOH . O ? ? A NA 406 A HOH 517 1_555 ? ? ? ? ? ? ? 2.443 ? metalc23 metalc ? ? A ILE 106 O ? ? ? 1_555 I NA . NA ? ? A ILE 106 A NA 405 1_555 ? ? ? ? ? ? ? 2.455 ? metalc24 metalc ? ? I NA . NA ? ? ? 1_555 P HOH . O ? ? A NA 405 P HOH 201 1_555 ? ? ? ? ? ? ? 2.471 ? metalc25 metalc ? ? A VAL 103 O ? ? ? 1_555 I NA . NA ? ? A VAL 103 A NA 405 1_555 ? ? ? ? ? ? ? 2.483 ? metalc26 metalc ? ? B DC 3 OP1 ? ? ? 1_555 J NA . NA ? ? D DC 3 A NA 406 1_555 ? ? ? ? ? ? ? 2.513 ? metalc27 metalc ? ? A ASP 124 OD1 ? ? ? 1_555 H MN . MN ? ? A ASP 124 A MN 404 1_555 ? ? ? ? ? ? ? 2.519 ? metalc28 metalc ? ? A LYS 60 O ? ? ? 1_555 J NA . NA ? ? A LYS 60 A NA 406 1_555 ? ? ? ? ? ? ? 2.539 ? metalc29 metalc ? ? K MN . MN ? ? ? 1_555 P HOH . O ? ? P MN 101 P HOH 211 1_555 ? ? ? ? ? ? ? 2.540 ? metalc30 metalc ? ? J NA . NA ? ? ? 1_555 O HOH . O ? ? A NA 406 D HOH 101 1_555 ? ? ? ? ? ? ? 2.589 ? metalc31 metalc ? ? I NA . NA ? ? ? 1_555 N HOH . O ? ? A NA 405 A HOH 513 1_555 ? ? ? ? ? ? ? 2.658 ? hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 D DC 5 N3 ? ? D DG 1 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 D DC 5 O2 ? ? D DG 1 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 D DC 5 N4 ? ? D DG 1 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? B DT 2 N3 ? ? ? 1_555 D DA 4 N1 ? ? D DT 2 T DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? B DT 2 O4 ? ? ? 1_555 D DA 4 N6 ? ? D DT 2 T DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? B DC 3 N3 ? ? ? 1_555 D DG 3 N1 ? ? D DC 3 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? B DC 3 N4 ? ? ? 1_555 D DG 3 O6 ? ? D DC 3 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? B DC 3 O2 ? ? ? 1_555 D DG 3 N2 ? ? D DC 3 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? B DG 4 N1 ? ? ? 1_555 D DC 2 N3 ? ? D DG 4 T DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? B DG 4 N2 ? ? ? 1_555 D DC 2 O2 ? ? D DG 4 T DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? B DG 4 O6 ? ? ? 1_555 D DC 2 N4 ? ? D DG 4 T DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog12 hydrog ? ? B DG 5 N1 ? ? ? 1_555 D DC 1 O2 ? ? D DG 5 T DC 1 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? hydrog13 hydrog ? ? C DG 1 N1 ? ? ? 1_555 D DC 16 N3 ? ? P DG 1 T DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog14 hydrog ? ? C DG 1 N2 ? ? ? 1_555 D DC 16 O2 ? ? P DG 1 T DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? C DG 1 O6 ? ? ? 1_555 D DC 16 N4 ? ? P DG 1 T DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog16 hydrog ? ? C DC 2 N3 ? ? ? 1_555 D DG 15 N1 ? ? P DC 2 T DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog17 hydrog ? ? C DC 2 N4 ? ? ? 1_555 D DG 15 O6 ? ? P DC 2 T DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog18 hydrog ? ? C DC 2 O2 ? ? ? 1_555 D DG 15 N2 ? ? P DC 2 T DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog19 hydrog ? ? C DT 3 N3 ? ? ? 1_555 D DA 14 N1 ? ? P DT 3 T DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog20 hydrog ? ? C DT 3 O4 ? ? ? 1_555 D DA 14 N6 ? ? P DT 3 T DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog21 hydrog ? ? C DG 4 N1 ? ? ? 1_555 D DC 13 N3 ? ? P DG 4 T DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog22 hydrog ? ? C DG 4 N2 ? ? ? 1_555 D DC 13 O2 ? ? P DG 4 T DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog23 hydrog ? ? C DG 4 O6 ? ? ? 1_555 D DC 13 N4 ? ? P DG 4 T DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog24 hydrog ? ? C DA 5 N1 ? ? ? 1_555 D DT 12 N3 ? ? P DA 5 T DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog25 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D DT 12 O4 ? ? P DA 5 T DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog26 hydrog ? ? C DT 6 N3 ? ? ? 1_555 D DA 11 N1 ? ? P DT 6 T DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog27 hydrog ? ? C DT 6 O4 ? ? ? 1_555 D DA 11 N6 ? ? P DT 6 T DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog28 hydrog ? ? C DG 7 N2 ? ? ? 1_555 D DT 10 O2 ? ? P DG 7 T DT 10 1_555 ? ? ? ? ? ? 'DG-DT MISPAIR' ? ? hydrog29 hydrog ? ? C DC 8 N3 ? ? ? 1_555 D DG 9 N1 ? ? P DC 8 T DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog30 hydrog ? ? C DC 8 N4 ? ? ? 1_555 D DG 9 O6 ? ? P DC 8 T DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog31 hydrog ? ? C DC 8 O2 ? ? ? 1_555 D DG 9 N2 ? ? P DC 8 T DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog32 hydrog ? ? C DG 9 N1 ? ? ? 1_555 D DC 8 N3 ? ? P DG 9 T DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog33 hydrog ? ? C DG 9 N2 ? ? ? 1_555 D DC 8 O2 ? ? P DG 9 T DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog34 hydrog ? ? C DG 9 O6 ? ? ? 1_555 D DC 8 N4 ? ? P DG 9 T DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog35 hydrog ? ? C DC 10 N3 ? ? ? 1_555 D DG 7 N1 ? ? P DC 10 T DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog36 hydrog ? ? C DC 10 N4 ? ? ? 1_555 D DG 7 O6 ? ? P DC 10 T DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog37 hydrog ? ? C DC 10 O2 ? ? ? 1_555 D DG 7 N2 ? ? P DC 10 T DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 274 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 274 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 275 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 275 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 4.85 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 150 ? PRO A 151 ? ILE A 150 PRO A 151 A 2 SER A 187 ? SER A 188 ? SER A 187 SER A 188 B 1 ILE A 174 ? CYS A 178 ? ILE A 174 CYS A 178 B 2 MET A 191 ? THR A 196 ? MET A 191 THR A 196 B 3 ARG A 253 ? LEU A 259 ? ARG A 253 LEU A 259 B 4 LYS A 234 ? CYS A 239 ? LYS A 234 CYS A 239 B 5 ILE A 224 ? LYS A 230 ? ILE A 224 LYS A 230 C 1 PHE A 291 ? ILE A 293 ? PHE A 291 ILE A 293 C 2 ILE A 298 ? PRO A 300 ? ILE A 298 PRO A 300 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 150 ? N ILE A 150 O SER A 188 ? O SER A 188 B 1 2 N THR A 176 ? N THR A 176 O LEU A 194 ? O LEU A 194 B 2 3 N VAL A 193 ? N VAL A 193 O ASP A 256 ? O ASP A 256 B 3 4 O ARG A 253 ? O ARG A 253 N CYS A 239 ? N CYS A 239 B 4 5 O MET A 236 ? O MET A 236 N LEU A 228 ? N LEU A 228 C 1 2 N THR A 292 ? N THR A 292 O ARG A 299 ? O ARG A 299 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 20 'BINDING SITE FOR RESIDUE DTP A 401' AC2 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE MN A 402' AC3 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE MN A 403' AC4 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE MN A 404' AC5 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE NA A 405' AC6 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE NA A 406' AC7 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE MN P 101' AC8 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE MN T 101' AC9 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE MN T 102' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 20 GLY A 179 ? GLY A 179 . ? 1_555 ? 2 AC1 20 SER A 180 ? SER A 180 . ? 1_555 ? 3 AC1 20 ARG A 183 ? ARG A 183 . ? 1_555 ? 4 AC1 20 SER A 188 ? SER A 188 . ? 1_555 ? 5 AC1 20 GLY A 189 ? GLY A 189 . ? 1_555 ? 6 AC1 20 ASP A 190 ? ASP A 190 . ? 1_555 ? 7 AC1 20 ASP A 192 ? ASP A 192 . ? 1_555 ? 8 AC1 20 TYR A 271 ? TYR A 271 . ? 1_555 ? 9 AC1 20 PHE A 272 ? PHE A 272 . ? 1_555 ? 10 AC1 20 THR A 273 ? THR A 273 . ? 1_555 ? 11 AC1 20 GLY A 274 ? GLY A 274 . ? 1_555 ? 12 AC1 20 ASP A 276 ? ASP A 276 . ? 1_555 ? 13 AC1 20 ASN A 279 ? ASN A 279 . ? 1_555 ? 14 AC1 20 MN F . ? MN A 402 . ? 1_555 ? 15 AC1 20 MN G . ? MN A 403 . ? 1_555 ? 16 AC1 20 HOH N . ? HOH A 524 . ? 1_555 ? 17 AC1 20 HOH N . ? HOH A 609 . ? 1_555 ? 18 AC1 20 DC C 10 ? DC P 10 . ? 1_555 ? 19 AC1 20 HOH P . ? HOH P 205 . ? 1_555 ? 20 AC1 20 DG D 6 ? DG T 6 . ? 1_555 ? 21 AC2 7 ASP A 190 ? ASP A 190 . ? 1_555 ? 22 AC2 7 ASP A 192 ? ASP A 192 . ? 1_555 ? 23 AC2 7 ASP A 256 ? ASP A 256 . ? 1_555 ? 24 AC2 7 DTP E . ? DTP A 401 . ? 1_555 ? 25 AC2 7 MN G . ? MN A 403 . ? 1_555 ? 26 AC2 7 HOH N . ? HOH A 524 . ? 1_555 ? 27 AC2 7 HOH P . ? HOH P 205 . ? 1_555 ? 28 AC3 5 ASP A 190 ? ASP A 190 . ? 1_555 ? 29 AC3 5 ASP A 192 ? ASP A 192 . ? 1_555 ? 30 AC3 5 DTP E . ? DTP A 401 . ? 1_555 ? 31 AC3 5 MN F . ? MN A 402 . ? 1_555 ? 32 AC3 5 HOH N . ? HOH A 503 . ? 1_555 ? 33 AC4 5 ASP A 124 ? ASP A 124 . ? 1_555 ? 34 AC4 5 HOH N . ? HOH A 619 . ? 1_555 ? 35 AC4 5 HOH N . ? HOH A 620 . ? 1_555 ? 36 AC4 5 HOH N . ? HOH A 621 . ? 1_555 ? 37 AC4 5 HOH N . ? HOH A 622 . ? 1_555 ? 38 AC5 6 THR A 101 ? THR A 101 . ? 1_555 ? 39 AC5 6 VAL A 103 ? VAL A 103 . ? 1_555 ? 40 AC5 6 ILE A 106 ? ILE A 106 . ? 1_555 ? 41 AC5 6 HOH N . ? HOH A 513 . ? 1_555 ? 42 AC5 6 DG C 9 ? DG P 9 . ? 1_555 ? 43 AC5 6 HOH P . ? HOH P 201 . ? 1_555 ? 44 AC6 6 LYS A 60 ? LYS A 60 . ? 1_555 ? 45 AC6 6 LEU A 62 ? LEU A 62 . ? 1_555 ? 46 AC6 6 VAL A 65 ? VAL A 65 . ? 1_555 ? 47 AC6 6 HOH N . ? HOH A 517 . ? 1_555 ? 48 AC6 6 DC B 3 ? DC D 3 . ? 1_555 ? 49 AC6 6 HOH O . ? HOH D 101 . ? 1_555 ? 50 AC7 2 DG C 4 ? DG P 4 . ? 1_555 ? 51 AC7 2 HOH P . ? HOH P 211 . ? 1_555 ? 52 AC8 1 HOH P . ? HOH P 210 . ? 1_555 ? 53 AC9 2 HOH O . ? HOH D 106 . ? 1_555 ? 54 AC9 2 HOH Q . ? HOH T 220 . ? 1_555 ? # _atom_sites.entry_id 4KLP _atom_sites.fract_transf_matrix[1][1] 0.018188 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.007810 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012738 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019738 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C MN N NA O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 SER 2 2 ? ? ? A . n A 1 3 LYS 3 3 ? ? ? A . n A 1 4 ARG 4 4 ? ? ? A . n A 1 5 LYS 5 5 ? ? ? A . n A 1 6 ALA 6 6 ? ? ? A . n A 1 7 PRO 7 7 ? ? ? A . n A 1 8 GLN 8 8 ? ? ? A . n A 1 9 GLU 9 9 ? ? ? A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 MET 18 18 18 MET MET A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ASN 24 24 24 ASN ASN A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 ASN 28 28 28 ASN ASN A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 HIS 34 34 34 HIS HIS A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 TYR 36 36 36 TYR TYR A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 TYR 39 39 39 TYR TYR A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 TYR 49 49 49 TYR TYR A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 HIS 51 51 51 HIS HIS A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 PRO 63 63 63 PRO PRO A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 ILE 73 73 73 ILE ILE A . n A 1 74 ASP 74 74 74 ASP ASP A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 PHE 76 76 76 PHE PHE A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 LYS 87 87 87 LYS LYS A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 ARG 89 89 89 ARG ARG A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 ASP 91 91 91 ASP ASP A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 ILE 97 97 97 ILE ILE A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 PHE 99 99 99 PHE PHE A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 SER 104 104 104 SER SER A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 PRO 108 108 108 PRO PRO A . n A 1 109 SER 109 109 109 SER SER A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 PHE 114 114 114 PHE PHE A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 ASP 116 116 116 ASP ASP A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 GLY 118 118 118 GLY GLY A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 LYS 120 120 120 LYS LYS A . n A 1 121 THR 121 121 121 THR THR A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 GLU 123 123 123 GLU GLU A . n A 1 124 ASP 124 124 124 ASP ASP A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 ARG 126 126 126 ARG ARG A . n A 1 127 LYS 127 127 127 LYS LYS A . n A 1 128 ASN 128 128 128 ASN ASN A . n A 1 129 GLU 129 129 129 GLU GLU A . n A 1 130 ASP 130 130 130 ASP ASP A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 LEU 132 132 132 LEU LEU A . n A 1 133 ASN 133 133 133 ASN ASN A . n A 1 134 HIS 134 134 134 HIS HIS A . n A 1 135 HIS 135 135 135 HIS HIS A . n A 1 136 GLN 136 136 136 GLN GLN A . n A 1 137 ARG 137 137 137 ARG ARG A . n A 1 138 ILE 138 138 138 ILE ILE A . n A 1 139 GLY 139 139 139 GLY GLY A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 LYS 141 141 141 LYS LYS A . n A 1 142 TYR 142 142 142 TYR TYR A . n A 1 143 PHE 143 143 143 PHE PHE A . n A 1 144 GLY 144 144 144 GLY GLY A . n A 1 145 ASP 145 145 145 ASP ASP A . n A 1 146 PHE 146 146 146 PHE PHE A . n A 1 147 GLU 147 147 147 GLU GLU A . n A 1 148 LYS 148 148 148 LYS LYS A . n A 1 149 ARG 149 149 149 ARG ARG A . n A 1 150 ILE 150 150 150 ILE ILE A . n A 1 151 PRO 151 151 151 PRO PRO A . n A 1 152 ARG 152 152 152 ARG ARG A . n A 1 153 GLU 153 153 153 GLU GLU A . n A 1 154 GLU 154 154 154 GLU GLU A . n A 1 155 MET 155 155 155 MET MET A . n A 1 156 LEU 156 156 156 LEU LEU A . n A 1 157 GLN 157 157 157 GLN GLN A . n A 1 158 MET 158 158 158 MET MET A . n A 1 159 GLN 159 159 159 GLN GLN A . n A 1 160 ASP 160 160 160 ASP ASP A . n A 1 161 ILE 161 161 161 ILE ILE A . n A 1 162 VAL 162 162 162 VAL VAL A . n A 1 163 LEU 163 163 163 LEU LEU A . n A 1 164 ASN 164 164 164 ASN ASN A . n A 1 165 GLU 165 165 165 GLU GLU A . n A 1 166 VAL 166 166 166 VAL VAL A . n A 1 167 LYS 167 167 167 LYS LYS A . n A 1 168 LYS 168 168 168 LYS LYS A . n A 1 169 VAL 169 169 169 VAL VAL A . n A 1 170 ASP 170 170 170 ASP ASP A . n A 1 171 SER 171 171 171 SER SER A . n A 1 172 GLU 172 172 172 GLU GLU A . n A 1 173 TYR 173 173 173 TYR TYR A . n A 1 174 ILE 174 174 174 ILE ILE A . n A 1 175 ALA 175 175 175 ALA ALA A . n A 1 176 THR 176 176 176 THR THR A . n A 1 177 VAL 177 177 177 VAL VAL A . n A 1 178 CYS 178 178 178 CYS CYS A . n A 1 179 GLY 179 179 179 GLY GLY A . n A 1 180 SER 180 180 180 SER SER A . n A 1 181 PHE 181 181 181 PHE PHE A . n A 1 182 ARG 182 182 182 ARG ARG A . n A 1 183 ARG 183 183 183 ARG ARG A . n A 1 184 GLY 184 184 184 GLY GLY A . n A 1 185 ALA 185 185 185 ALA ALA A . n A 1 186 GLU 186 186 186 GLU GLU A . n A 1 187 SER 187 187 187 SER SER A . n A 1 188 SER 188 188 188 SER SER A . n A 1 189 GLY 189 189 189 GLY GLY A . n A 1 190 ASP 190 190 190 ASP ASP A . n A 1 191 MET 191 191 191 MET MET A . n A 1 192 ASP 192 192 192 ASP ASP A . n A 1 193 VAL 193 193 193 VAL VAL A . n A 1 194 LEU 194 194 194 LEU LEU A . n A 1 195 LEU 195 195 195 LEU LEU A . n A 1 196 THR 196 196 196 THR THR A . n A 1 197 HIS 197 197 197 HIS HIS A . n A 1 198 PRO 198 198 198 PRO PRO A . n A 1 199 SER 199 199 199 SER SER A . n A 1 200 PHE 200 200 200 PHE PHE A . n A 1 201 THR 201 201 201 THR THR A . n A 1 202 SER 202 202 202 SER SER A . n A 1 203 GLU 203 203 203 GLU GLU A . n A 1 204 SER 204 204 204 SER SER A . n A 1 205 THR 205 205 205 THR THR A . n A 1 206 LYS 206 206 206 LYS LYS A . n A 1 207 GLN 207 207 207 GLN GLN A . n A 1 208 PRO 208 208 208 PRO PRO A . n A 1 209 LYS 209 209 209 LYS LYS A . n A 1 210 LEU 210 210 210 LEU LEU A . n A 1 211 LEU 211 211 211 LEU LEU A . n A 1 212 HIS 212 212 212 HIS HIS A . n A 1 213 GLN 213 213 213 GLN GLN A . n A 1 214 VAL 214 214 214 VAL VAL A . n A 1 215 VAL 215 215 215 VAL VAL A . n A 1 216 GLU 216 216 216 GLU GLU A . n A 1 217 GLN 217 217 217 GLN GLN A . n A 1 218 LEU 218 218 218 LEU LEU A . n A 1 219 GLN 219 219 219 GLN GLN A . n A 1 220 LYS 220 220 220 LYS LYS A . n A 1 221 VAL 221 221 221 VAL VAL A . n A 1 222 HIS 222 222 222 HIS HIS A . n A 1 223 PHE 223 223 223 PHE PHE A . n A 1 224 ILE 224 224 224 ILE ILE A . n A 1 225 THR 225 225 225 THR THR A . n A 1 226 ASP 226 226 226 ASP ASP A . n A 1 227 THR 227 227 227 THR THR A . n A 1 228 LEU 228 228 228 LEU LEU A . n A 1 229 SER 229 229 229 SER SER A . n A 1 230 LYS 230 230 230 LYS LYS A . n A 1 231 GLY 231 231 231 GLY GLY A . n A 1 232 GLU 232 232 232 GLU GLU A . n A 1 233 THR 233 233 233 THR THR A . n A 1 234 LYS 234 234 234 LYS LYS A . n A 1 235 PHE 235 235 235 PHE PHE A . n A 1 236 MET 236 236 236 MET MET A . n A 1 237 GLY 237 237 237 GLY GLY A . n A 1 238 VAL 238 238 238 VAL VAL A . n A 1 239 CYS 239 239 239 CYS CYS A . n A 1 240 GLN 240 240 240 GLN GLN A . n A 1 241 LEU 241 241 241 LEU LEU A . n A 1 242 PRO 242 242 242 PRO PRO A . n A 1 243 SER 243 243 243 SER SER A . n A 1 244 LYS 244 244 244 LYS LYS A . n A 1 245 ASN 245 245 ? ? ? A . n A 1 246 ASP 246 246 ? ? ? A . n A 1 247 GLU 247 247 247 GLU GLU A . n A 1 248 LYS 248 248 248 LYS LYS A . n A 1 249 GLU 249 249 249 GLU GLU A . n A 1 250 TYR 250 250 250 TYR TYR A . n A 1 251 PRO 251 251 251 PRO PRO A . n A 1 252 HIS 252 252 252 HIS HIS A . n A 1 253 ARG 253 253 253 ARG ARG A . n A 1 254 ARG 254 254 254 ARG ARG A . n A 1 255 ILE 255 255 255 ILE ILE A . n A 1 256 ASP 256 256 256 ASP ASP A . n A 1 257 ILE 257 257 257 ILE ILE A . n A 1 258 ARG 258 258 258 ARG ARG A . n A 1 259 LEU 259 259 259 LEU LEU A . n A 1 260 ILE 260 260 260 ILE ILE A . n A 1 261 PRO 261 261 261 PRO PRO A . n A 1 262 LYS 262 262 262 LYS LYS A . n A 1 263 ASP 263 263 263 ASP ASP A . n A 1 264 GLN 264 264 264 GLN GLN A . n A 1 265 TYR 265 265 265 TYR TYR A . n A 1 266 TYR 266 266 266 TYR TYR A . n A 1 267 CYS 267 267 267 CYS CYS A . n A 1 268 GLY 268 268 268 GLY GLY A . n A 1 269 VAL 269 269 269 VAL VAL A . n A 1 270 LEU 270 270 270 LEU LEU A . n A 1 271 TYR 271 271 271 TYR TYR A . n A 1 272 PHE 272 272 272 PHE PHE A . n A 1 273 THR 273 273 273 THR THR A . n A 1 274 GLY 274 274 274 GLY GLY A . n A 1 275 SER 275 275 275 SER SER A . n A 1 276 ASP 276 276 276 ASP ASP A . n A 1 277 ILE 277 277 277 ILE ILE A . n A 1 278 PHE 278 278 278 PHE PHE A . n A 1 279 ASN 279 279 279 ASN ASN A . n A 1 280 LYS 280 280 280 LYS LYS A . n A 1 281 ASN 281 281 281 ASN ASN A . n A 1 282 MET 282 282 282 MET MET A . n A 1 283 ARG 283 283 283 ARG ARG A . n A 1 284 ALA 284 284 284 ALA ALA A . n A 1 285 HIS 285 285 285 HIS HIS A . n A 1 286 ALA 286 286 286 ALA ALA A . n A 1 287 LEU 287 287 287 LEU LEU A . n A 1 288 GLU 288 288 288 GLU GLU A . n A 1 289 LYS 289 289 289 LYS LYS A . n A 1 290 GLY 290 290 290 GLY GLY A . n A 1 291 PHE 291 291 291 PHE PHE A . n A 1 292 THR 292 292 292 THR THR A . n A 1 293 ILE 293 293 293 ILE ILE A . n A 1 294 ASN 294 294 294 ASN ASN A . n A 1 295 GLU 295 295 295 GLU GLU A . n A 1 296 TYR 296 296 296 TYR TYR A . n A 1 297 THR 297 297 297 THR THR A . n A 1 298 ILE 298 298 298 ILE ILE A . n A 1 299 ARG 299 299 299 ARG ARG A . n A 1 300 PRO 300 300 300 PRO PRO A . n A 1 301 LEU 301 301 301 LEU LEU A . n A 1 302 GLY 302 302 302 GLY GLY A . n A 1 303 VAL 303 303 303 VAL VAL A . n A 1 304 THR 304 304 304 THR THR A . n A 1 305 GLY 305 305 305 GLY GLY A . n A 1 306 VAL 306 306 306 VAL VAL A . n A 1 307 ALA 307 307 307 ALA ALA A . n A 1 308 GLY 308 308 308 GLY GLY A . n A 1 309 GLU 309 309 309 GLU GLU A . n A 1 310 PRO 310 310 310 PRO PRO A . n A 1 311 LEU 311 311 311 LEU LEU A . n A 1 312 PRO 312 312 312 PRO PRO A . n A 1 313 VAL 313 313 313 VAL VAL A . n A 1 314 ASP 314 314 314 ASP ASP A . n A 1 315 SER 315 315 315 SER SER A . n A 1 316 GLU 316 316 316 GLU GLU A . n A 1 317 LYS 317 317 317 LYS LYS A . n A 1 318 ASP 318 318 318 ASP ASP A . n A 1 319 ILE 319 319 319 ILE ILE A . n A 1 320 PHE 320 320 320 PHE PHE A . n A 1 321 ASP 321 321 321 ASP ASP A . n A 1 322 TYR 322 322 322 TYR TYR A . n A 1 323 ILE 323 323 323 ILE ILE A . n A 1 324 GLN 324 324 324 GLN GLN A . n A 1 325 TRP 325 325 325 TRP TRP A . n A 1 326 LYS 326 326 326 LYS LYS A . n A 1 327 TYR 327 327 327 TYR TYR A . n A 1 328 ARG 328 328 328 ARG ARG A . n A 1 329 GLU 329 329 329 GLU GLU A . n A 1 330 PRO 330 330 330 PRO PRO A . n A 1 331 LYS 331 331 331 LYS LYS A . n A 1 332 ASP 332 332 332 ASP ASP A . n A 1 333 ARG 333 333 333 ARG ARG A . n A 1 334 SER 334 334 334 SER SER A . n A 1 335 GLU 335 335 335 GLU GLU A . n B 2 1 DG 1 1 1 DG DG D . n B 2 2 DT 2 2 2 DT DT D . n B 2 3 DC 3 3 3 DC DC D . n B 2 4 DG 4 4 4 DG DG D . n B 2 5 DG 5 5 5 DG DG D . n C 3 1 DG 1 1 1 DG DG P . n C 3 2 DC 2 2 2 DC DC P . n C 3 3 DT 3 3 3 DT DT P . n C 3 4 DG 4 4 4 DG DG P . n C 3 5 DA 5 5 5 DA DA P . n C 3 6 DT 6 6 6 DT DT P . n C 3 7 DG 7 7 7 DG DG P . n C 3 8 DC 8 8 8 DC DC P . n C 3 9 DG 9 9 9 DG DG P . n C 3 10 DC 10 10 10 DC DC P . n D 4 1 DC 1 1 1 DC DC T . n D 4 2 DC 2 2 2 DC DC T . n D 4 3 DG 3 3 3 DG DG T . n D 4 4 DA 4 4 4 DA DA T . n D 4 5 DC 5 5 5 DC DC T . n D 4 6 DG 6 6 6 DG DG T . n D 4 7 DG 7 7 7 DG DG T . n D 4 8 DC 8 8 8 DC DC T . n D 4 9 DG 9 9 9 DG DG T . n D 4 10 DT 10 10 10 DT DT T . n D 4 11 DA 11 11 11 DA DA T . n D 4 12 DT 12 12 12 DT DT T . n D 4 13 DC 13 13 13 DC DC T . n D 4 14 DA 14 14 14 DA DA T . n D 4 15 DG 15 15 15 DG DG T . n D 4 16 DC 16 16 16 DC DC T . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 DTP 1 401 0 DTP DTP A . F 6 MN 1 402 1 MN MN A . G 6 MN 1 403 2 MN MN A . H 6 MN 1 404 6 MN Mn A . I 7 NA 1 405 1 NA NA A . J 7 NA 1 406 2 NA NA A . K 6 MN 1 101 4 MN MN P . L 6 MN 1 101 3 MN MN T . M 6 MN 1 102 5 MN MN T . N 8 HOH 1 501 3 HOH HOH A . N 8 HOH 2 502 5 HOH HOH A . N 8 HOH 3 503 6 HOH HOH A . N 8 HOH 4 504 7 HOH HOH A . N 8 HOH 5 505 8 HOH HOH A . N 8 HOH 6 506 10 HOH HOH A . N 8 HOH 7 507 12 HOH HOH A . N 8 HOH 8 508 13 HOH HOH A . N 8 HOH 9 509 15 HOH HOH A . N 8 HOH 10 510 17 HOH HOH A . N 8 HOH 11 511 18 HOH HOH A . N 8 HOH 12 512 20 HOH HOH A . N 8 HOH 13 513 21 HOH HOH A . N 8 HOH 14 514 22 HOH HOH A . N 8 HOH 15 515 23 HOH HOH A . N 8 HOH 16 516 24 HOH HOH A . N 8 HOH 17 517 26 HOH HOH A . N 8 HOH 18 518 27 HOH HOH A . N 8 HOH 19 519 28 HOH HOH A . N 8 HOH 20 520 29 HOH HOH A . N 8 HOH 21 521 31 HOH HOH A . N 8 HOH 22 522 32 HOH HOH A . N 8 HOH 23 523 33 HOH HOH A . N 8 HOH 24 524 34 HOH HOH A . N 8 HOH 25 525 35 HOH HOH A . N 8 HOH 26 526 36 HOH HOH A . N 8 HOH 27 527 40 HOH HOH A . N 8 HOH 28 528 41 HOH HOH A . N 8 HOH 29 529 45 HOH HOH A . N 8 HOH 30 530 46 HOH HOH A . N 8 HOH 31 531 48 HOH HOH A . N 8 HOH 32 532 49 HOH HOH A . N 8 HOH 33 533 50 HOH HOH A . N 8 HOH 34 534 51 HOH HOH A . N 8 HOH 35 535 52 HOH HOH A . N 8 HOH 36 536 53 HOH HOH A . N 8 HOH 37 537 54 HOH HOH A . N 8 HOH 38 538 57 HOH HOH A . N 8 HOH 39 539 58 HOH HOH A . N 8 HOH 40 540 59 HOH HOH A . N 8 HOH 41 541 60 HOH HOH A . N 8 HOH 42 542 61 HOH HOH A . N 8 HOH 43 543 62 HOH HOH A . N 8 HOH 44 544 63 HOH HOH A . N 8 HOH 45 545 64 HOH HOH A . N 8 HOH 46 546 65 HOH HOH A . N 8 HOH 47 547 67 HOH HOH A . N 8 HOH 48 548 68 HOH HOH A . N 8 HOH 49 549 71 HOH HOH A . N 8 HOH 50 550 72 HOH HOH A . N 8 HOH 51 551 73 HOH HOH A . N 8 HOH 52 552 74 HOH HOH A . N 8 HOH 53 553 75 HOH HOH A . N 8 HOH 54 554 76 HOH HOH A . N 8 HOH 55 555 79 HOH HOH A . N 8 HOH 56 556 80 HOH HOH A . N 8 HOH 57 557 82 HOH HOH A . N 8 HOH 58 558 83 HOH HOH A . N 8 HOH 59 559 84 HOH HOH A . N 8 HOH 60 560 86 HOH HOH A . N 8 HOH 61 561 87 HOH HOH A . N 8 HOH 62 562 88 HOH HOH A . N 8 HOH 63 563 89 HOH HOH A . N 8 HOH 64 564 90 HOH HOH A . N 8 HOH 65 565 91 HOH HOH A . N 8 HOH 66 566 92 HOH HOH A . N 8 HOH 67 567 93 HOH HOH A . N 8 HOH 68 568 94 HOH HOH A . N 8 HOH 69 569 96 HOH HOH A . N 8 HOH 70 570 97 HOH HOH A . N 8 HOH 71 571 98 HOH HOH A . N 8 HOH 72 572 99 HOH HOH A . N 8 HOH 73 573 100 HOH HOH A . N 8 HOH 74 574 101 HOH HOH A . N 8 HOH 75 575 102 HOH HOH A . N 8 HOH 76 576 106 HOH HOH A . N 8 HOH 77 577 107 HOH HOH A . N 8 HOH 78 578 108 HOH HOH A . N 8 HOH 79 579 110 HOH HOH A . N 8 HOH 80 580 111 HOH HOH A . N 8 HOH 81 581 113 HOH HOH A . N 8 HOH 82 582 115 HOH HOH A . N 8 HOH 83 583 117 HOH HOH A . N 8 HOH 84 584 118 HOH HOH A . N 8 HOH 85 585 119 HOH HOH A . N 8 HOH 86 586 120 HOH HOH A . N 8 HOH 87 587 121 HOH HOH A . N 8 HOH 88 588 123 HOH HOH A . N 8 HOH 89 589 124 HOH HOH A . N 8 HOH 90 590 125 HOH HOH A . N 8 HOH 91 591 129 HOH HOH A . N 8 HOH 92 592 130 HOH HOH A . N 8 HOH 93 593 131 HOH HOH A . N 8 HOH 94 594 132 HOH HOH A . N 8 HOH 95 595 133 HOH HOH A . N 8 HOH 96 596 135 HOH HOH A . N 8 HOH 97 597 136 HOH HOH A . N 8 HOH 98 598 137 HOH HOH A . N 8 HOH 99 599 138 HOH HOH A . N 8 HOH 100 600 139 HOH HOH A . N 8 HOH 101 601 141 HOH HOH A . N 8 HOH 102 602 144 HOH HOH A . N 8 HOH 103 603 145 HOH HOH A . N 8 HOH 104 604 146 HOH HOH A . N 8 HOH 105 605 147 HOH HOH A . N 8 HOH 106 606 149 HOH HOH A . N 8 HOH 107 607 151 HOH HOH A . N 8 HOH 108 608 152 HOH HOH A . N 8 HOH 109 609 155 HOH HOH A . N 8 HOH 110 610 156 HOH HOH A . N 8 HOH 111 611 159 HOH HOH A . N 8 HOH 112 612 161 HOH HOH A . N 8 HOH 113 613 163 HOH HOH A . N 8 HOH 114 614 166 HOH HOH A . N 8 HOH 115 615 167 HOH HOH A . N 8 HOH 116 616 168 HOH HOH A . N 8 HOH 117 617 169 HOH HOH A . N 8 HOH 118 618 170 HOH HOH A . N 8 HOH 119 619 1 HOH HOH A . N 8 HOH 120 620 2 HOH HOH A . N 8 HOH 121 621 172 HOH HOH A . N 8 HOH 122 622 173 HOH HOH A . O 8 HOH 1 101 11 HOH HOH D . O 8 HOH 2 102 14 HOH HOH D . O 8 HOH 3 103 16 HOH HOH D . O 8 HOH 4 104 19 HOH HOH D . O 8 HOH 5 105 38 HOH HOH D . O 8 HOH 6 106 55 HOH HOH D . O 8 HOH 7 107 70 HOH HOH D . O 8 HOH 8 108 109 HOH HOH D . P 8 HOH 1 201 43 HOH HOH P . P 8 HOH 2 202 44 HOH HOH P . P 8 HOH 3 203 95 HOH HOH P . P 8 HOH 4 204 114 HOH HOH P . P 8 HOH 5 205 127 HOH HOH P . P 8 HOH 6 206 140 HOH HOH P . P 8 HOH 7 207 143 HOH HOH P . P 8 HOH 8 208 157 HOH HOH P . P 8 HOH 9 209 158 HOH HOH P . P 8 HOH 10 210 160 HOH HOH P . P 8 HOH 11 211 165 HOH HOH P . Q 8 HOH 1 201 9 HOH HOH T . Q 8 HOH 2 202 25 HOH HOH T . Q 8 HOH 3 203 30 HOH HOH T . Q 8 HOH 4 204 37 HOH HOH T . Q 8 HOH 5 205 39 HOH HOH T . Q 8 HOH 6 206 42 HOH HOH T . Q 8 HOH 7 207 47 HOH HOH T . Q 8 HOH 8 208 56 HOH HOH T . Q 8 HOH 9 209 66 HOH HOH T . Q 8 HOH 10 210 69 HOH HOH T . Q 8 HOH 11 211 77 HOH HOH T . Q 8 HOH 12 212 78 HOH HOH T . Q 8 HOH 13 213 81 HOH HOH T . Q 8 HOH 14 214 85 HOH HOH T . Q 8 HOH 15 215 103 HOH HOH T . Q 8 HOH 16 216 104 HOH HOH T . Q 8 HOH 17 217 112 HOH HOH T . Q 8 HOH 18 218 116 HOH HOH T . Q 8 HOH 19 219 122 HOH HOH T . Q 8 HOH 20 220 134 HOH HOH T . Q 8 HOH 21 221 142 HOH HOH T . Q 8 HOH 22 222 148 HOH HOH T . Q 8 HOH 23 223 154 HOH HOH T . Q 8 HOH 24 224 164 HOH HOH T . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5840 ? 1 MORE -74 ? 1 'SSA (A^2)' 20570 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O2G ? E DTP . ? A DTP 401 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 86.6 ? 2 O2G ? E DTP . ? A DTP 401 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 171.4 ? 3 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 94.5 ? 4 O2G ? E DTP . ? A DTP 401 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O2B ? E DTP . ? A DTP 401 ? 1_555 88.0 ? 5 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O2B ? E DTP . ? A DTP 401 ? 1_555 173.9 ? 6 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O2B ? E DTP . ? A DTP 401 ? 1_555 90.4 ? 7 O2G ? E DTP . ? A DTP 401 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O2A ? E DTP . ? A DTP 401 ? 1_555 83.6 ? 8 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O2A ? E DTP . ? A DTP 401 ? 1_555 92.9 ? 9 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O2A ? E DTP . ? A DTP 401 ? 1_555 87.8 ? 10 O2B ? E DTP . ? A DTP 401 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O2A ? E DTP . ? A DTP 401 ? 1_555 83.6 ? 11 O2G ? E DTP . ? A DTP 401 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O ? N HOH . ? A HOH 503 ? 1_555 101.7 ? 12 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O ? N HOH . ? A HOH 503 ? 1_555 89.9 ? 13 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O ? N HOH . ? A HOH 503 ? 1_555 86.9 ? 14 O2B ? E DTP . ? A DTP 401 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O ? N HOH . ? A HOH 503 ? 1_555 94.0 ? 15 O2A ? E DTP . ? A DTP 401 ? 1_555 MN ? G MN . ? A MN 403 ? 1_555 O ? N HOH . ? A HOH 503 ? 1_555 174.2 ? 16 O ? N HOH . ? A HOH 621 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O ? N HOH . ? A HOH 620 ? 1_555 90.8 ? 17 O ? N HOH . ? A HOH 621 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O ? N HOH . ? A HOH 622 ? 1_555 90.1 ? 18 O ? N HOH . ? A HOH 620 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O ? N HOH . ? A HOH 622 ? 1_555 85.0 ? 19 O ? N HOH . ? A HOH 621 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O ? N HOH . ? A HOH 619 ? 1_555 89.5 ? 20 O ? N HOH . ? A HOH 620 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O ? N HOH . ? A HOH 619 ? 1_555 167.8 ? 21 O ? N HOH . ? A HOH 622 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O ? N HOH . ? A HOH 619 ? 1_555 82.8 ? 22 O ? N HOH . ? A HOH 621 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 OD1 ? A ASP 124 ? A ASP 124 ? 1_555 157.7 ? 23 O ? N HOH . ? A HOH 620 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 OD1 ? A ASP 124 ? A ASP 124 ? 1_555 87.3 ? 24 O ? N HOH . ? A HOH 622 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 OD1 ? A ASP 124 ? A ASP 124 ? 1_555 67.6 ? 25 O ? N HOH . ? A HOH 619 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 OD1 ? A ASP 124 ? A ASP 124 ? 1_555 87.8 ? 26 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 101.9 ? 27 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 96.5 ? 28 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 93.0 ? 29 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 O2A ? E DTP . ? A DTP 401 ? 1_555 91.5 ? 30 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 O2A ? E DTP . ? A DTP 401 ? 1_555 93.0 ? 31 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 O2A ? E DTP . ? A DTP 401 ? 1_555 168.8 ? 32 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 O ? P HOH . ? P HOH 205 ? 1_555 82.9 ? 33 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 O ? P HOH . ? P HOH 205 ? 1_555 175.0 ? 34 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 O ? P HOH . ? P HOH 205 ? 1_555 85.4 ? 35 O2A ? E DTP . ? A DTP 401 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 O ? P HOH . ? P HOH 205 ? 1_555 87.9 ? 36 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 O ? N HOH . ? A HOH 524 ? 1_555 171.1 ? 37 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 O ? N HOH . ? A HOH 524 ? 1_555 77.7 ? 38 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 O ? N HOH . ? A HOH 524 ? 1_555 92.4 ? 39 O2A ? E DTP . ? A DTP 401 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 O ? N HOH . ? A HOH 524 ? 1_555 79.7 ? 40 O ? P HOH . ? P HOH 205 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 O ? N HOH . ? A HOH 524 ? 1_555 97.7 ? 41 O ? A LEU 62 ? A LEU 62 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? A VAL 65 ? A VAL 65 ? 1_555 95.8 ? 42 O ? A LEU 62 ? A LEU 62 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? N HOH . ? A HOH 517 ? 1_555 88.4 ? 43 O ? A VAL 65 ? A VAL 65 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? N HOH . ? A HOH 517 ? 1_555 174.7 ? 44 O ? A LEU 62 ? A LEU 62 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 OP1 ? B DC 3 ? D DC 3 ? 1_555 94.8 ? 45 O ? A VAL 65 ? A VAL 65 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 OP1 ? B DC 3 ? D DC 3 ? 1_555 80.9 ? 46 O ? N HOH . ? A HOH 517 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 OP1 ? B DC 3 ? D DC 3 ? 1_555 95.5 ? 47 O ? A LEU 62 ? A LEU 62 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? A LYS 60 ? A LYS 60 ? 1_555 95.8 ? 48 O ? A VAL 65 ? A VAL 65 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? A LYS 60 ? A LYS 60 ? 1_555 95.3 ? 49 O ? N HOH . ? A HOH 517 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? A LYS 60 ? A LYS 60 ? 1_555 87.5 ? 50 OP1 ? B DC 3 ? D DC 3 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? A LYS 60 ? A LYS 60 ? 1_555 169.1 ? 51 O ? A LEU 62 ? A LEU 62 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? O HOH . ? D HOH 101 ? 1_555 169.0 ? 52 O ? A VAL 65 ? A VAL 65 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? O HOH . ? D HOH 101 ? 1_555 92.1 ? 53 O ? N HOH . ? A HOH 517 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? O HOH . ? D HOH 101 ? 1_555 83.4 ? 54 OP1 ? B DC 3 ? D DC 3 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? O HOH . ? D HOH 101 ? 1_555 78.9 ? 55 O ? A LYS 60 ? A LYS 60 ? 1_555 NA ? J NA . ? A NA 406 ? 1_555 O ? O HOH . ? D HOH 101 ? 1_555 91.1 ? 56 O ? A THR 101 ? A THR 101 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 166.4 ? 57 O ? A THR 101 ? A THR 101 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? A ILE 106 ? A ILE 106 ? 1_555 94.1 ? 58 OP1 ? C DG 9 ? P DG 9 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? A ILE 106 ? A ILE 106 ? 1_555 97.2 ? 59 O ? A THR 101 ? A THR 101 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? P HOH . ? P HOH 201 ? 1_555 84.1 ? 60 OP1 ? C DG 9 ? P DG 9 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? P HOH . ? P HOH 201 ? 1_555 89.2 ? 61 O ? A ILE 106 ? A ILE 106 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? P HOH . ? P HOH 201 ? 1_555 85.8 ? 62 O ? A THR 101 ? A THR 101 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? A VAL 103 ? A VAL 103 ? 1_555 92.6 ? 63 OP1 ? C DG 9 ? P DG 9 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? A VAL 103 ? A VAL 103 ? 1_555 95.3 ? 64 O ? A ILE 106 ? A ILE 106 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? A VAL 103 ? A VAL 103 ? 1_555 88.0 ? 65 O ? P HOH . ? P HOH 201 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? A VAL 103 ? A VAL 103 ? 1_555 172.8 ? 66 O ? A THR 101 ? A THR 101 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? N HOH . ? A HOH 513 ? 1_555 79.9 ? 67 OP1 ? C DG 9 ? P DG 9 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? N HOH . ? A HOH 513 ? 1_555 88.9 ? 68 O ? A ILE 106 ? A ILE 106 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? N HOH . ? A HOH 513 ? 1_555 173.9 ? 69 O ? P HOH . ? P HOH 201 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? N HOH . ? A HOH 513 ? 1_555 94.2 ? 70 O ? A VAL 103 ? A VAL 103 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? N HOH . ? A HOH 513 ? 1_555 91.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-07-17 2 'Structure model' 1 1 2013-09-04 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # _diffrn_reflns.av_R_equivalents 0.058 _diffrn_reflns.number 93085 _diffrn_reflns.diffrn_id 1 # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 HKL . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 PHENIX 1.7_650 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 3 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 StructureStudio . ? ? ? ? 'data collection' ? ? ? 5 HKL . ? ? ? ? 'data scaling' ? ? ? 6 PHENIX . ? ? ? ? phasing ? ? ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" D DT 2 ? ? "C1'" D DT 2 ? ? N1 D DT 2 ? ? 103.37 108.00 -4.63 0.70 N 2 1 "O4'" P DC 10 ? ? "C1'" P DC 10 ? ? N1 P DC 10 ? ? 110.54 108.30 2.24 0.30 N 3 1 "O4'" T DA 11 ? ? "C1'" T DA 11 ? ? N9 T DA 11 ? ? 102.56 108.00 -5.44 0.70 N 4 1 "C3'" T DC 13 ? ? "C2'" T DC 13 ? ? "C1'" T DC 13 ? ? 97.26 102.40 -5.14 0.80 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 178 ? ? -119.66 -151.42 2 1 GLU A 203 ? ? -106.66 -81.56 3 1 SER A 204 ? ? 45.11 -8.31 4 1 THR A 205 ? ? 45.69 90.30 5 1 LYS A 206 ? ? -31.62 120.85 6 1 LYS A 209 ? ? 83.54 4.42 7 1 HIS A 222 ? ? 53.63 19.27 8 1 LYS A 289 ? ? -141.03 -8.85 9 1 ASN A 294 ? ? -129.44 -165.16 10 1 VAL A 303 ? ? -12.94 -85.44 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A SER 2 ? A SER 2 3 1 Y 1 A LYS 3 ? A LYS 3 4 1 Y 1 A ARG 4 ? A ARG 4 5 1 Y 1 A LYS 5 ? A LYS 5 6 1 Y 1 A ALA 6 ? A ALA 6 7 1 Y 1 A PRO 7 ? A PRO 7 8 1 Y 1 A GLN 8 ? A GLN 8 9 1 Y 1 A GLU 9 ? A GLU 9 10 1 Y 1 A ASN 245 ? A ASN 245 11 1 Y 1 A ASP 246 ? A ASP 246 # _cell_measurement.reflns_used 93085 _cell_measurement.entry_id 4KLP # _diffrn_measurement.details '0.50 degrees, 4.3 sec, detector distance 220.00 mm' _diffrn_measurement.diffrn_id 1 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4KLP 'b-form double helix' 4KLP 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 D DC 5 1_555 -0.460 -0.148 -0.468 -13.392 -0.275 -1.626 1 D_DG1:DC5_T D 1 ? T 5 ? 19 1 1 B DT 2 1_555 D DA 4 1_555 -0.518 -0.166 0.146 -5.303 -8.861 -0.534 2 D_DT2:DA4_T D 2 ? T 4 ? 20 1 1 B DC 3 1_555 D DG 3 1_555 -0.277 -0.265 0.121 3.550 -11.889 -5.695 3 D_DC3:DG3_T D 3 ? T 3 ? 19 1 1 B DG 4 1_555 D DC 2 1_555 0.802 -0.379 0.419 5.180 -11.991 -4.989 4 D_DG4:DC2_T D 4 ? T 2 ? 19 1 1 B DG 5 1_555 D DC 1 1_555 -1.882 0.107 -0.010 -4.847 -7.974 21.819 5 D_DG5:DC1_T D 5 ? T 1 ? ? 1 1 C DG 1 1_555 D DC 16 1_555 -0.260 -0.014 0.046 -7.833 -13.630 2.546 6 P_DG1:DC16_T P 1 ? T 16 ? 19 1 1 C DC 2 1_555 D DG 15 1_555 0.376 -0.228 0.403 -6.004 -12.038 -1.599 7 P_DC2:DG15_T P 2 ? T 15 ? 19 1 1 C DT 3 1_555 D DA 14 1_555 0.076 -0.049 0.112 0.987 -10.426 -0.040 8 P_DT3:DA14_T P 3 ? T 14 ? 20 1 1 C DG 4 1_555 D DC 13 1_555 -0.256 -0.145 -0.004 -6.085 -13.436 -0.136 9 P_DG4:DC13_T P 4 ? T 13 ? 19 1 1 C DA 5 1_555 D DT 12 1_555 0.000 -0.104 0.084 -4.308 -12.429 2.506 10 P_DA5:DT12_T P 5 ? T 12 ? 20 1 1 C DT 6 1_555 D DA 11 1_555 -0.090 -0.116 -0.122 1.448 -3.460 0.653 11 P_DT6:DA11_T P 6 ? T 11 ? 20 1 1 C DG 7 1_555 D DT 10 1_555 -0.125 -0.207 -0.109 -7.485 -10.136 -2.081 12 P_DG7:DT10_T P 7 ? T 10 ? ? ? 1 C DC 8 1_555 D DG 9 1_555 0.291 -0.108 0.031 -3.903 -7.401 -0.404 13 P_DC8:DG9_T P 8 ? T 9 ? 19 1 1 C DG 9 1_555 D DC 8 1_555 -0.489 -0.346 -0.065 -0.100 0.432 -3.199 14 P_DG9:DC8_T P 9 ? T 8 ? 19 1 1 C DC 10 1_555 D DG 7 1_555 0.049 -0.189 -0.568 10.176 1.070 1.023 15 P_DC10:DG7_T P 10 ? T 7 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 1 1_555 D DC 5 1_555 B DT 2 1_555 D DA 4 1_555 -0.632 -0.277 3.110 -3.968 1.569 28.497 -0.894 0.417 3.148 3.165 8.004 28.808 1 DD_DG1DT2:DA4DC5_TT D 1 ? T 5 ? D 2 ? T 4 ? 1 B DT 2 1_555 D DA 4 1_555 B DC 3 1_555 D DG 3 1_555 0.358 0.623 3.140 2.883 -1.070 38.809 1.059 -0.202 3.140 -1.608 -4.330 38.926 2 DD_DT2DC3:DG3DA4_TT D 2 ? T 4 ? D 3 ? T 3 ? 1 B DC 3 1_555 D DG 3 1_555 B DG 4 1_555 D DC 2 1_555 -0.017 1.165 3.375 -0.008 2.377 42.596 1.353 0.023 3.432 3.269 0.011 42.659 3 DD_DC3DG4:DC2DG3_TT D 3 ? T 3 ? D 4 ? T 2 ? 1 B DG 4 1_555 D DC 2 1_555 B DG 5 1_555 D DC 1 1_555 1.189 0.228 3.493 3.678 0.806 29.617 0.260 -1.474 3.615 1.569 -7.158 29.850 4 DD_DG4DG5:DC1DC2_TT D 4 ? T 2 ? D 5 ? T 1 ? 1 C DG 1 1_555 D DC 16 1_555 C DC 2 1_555 D DG 15 1_555 -0.779 -0.302 3.279 -3.477 -1.567 34.977 -0.263 0.762 3.349 -2.598 5.764 35.178 5 PP_DG1DC2:DG15DC16_TT P 1 ? T 16 ? P 2 ? T 15 ? 1 C DC 2 1_555 D DG 15 1_555 C DT 3 1_555 D DA 14 1_555 -0.367 0.268 3.128 3.506 4.534 27.842 -0.450 1.519 3.064 9.299 -7.191 28.414 6 PP_DC2DT3:DA14DG15_TT P 2 ? T 15 ? P 3 ? T 14 ? 1 C DT 3 1_555 D DA 14 1_555 C DG 4 1_555 D DC 13 1_555 0.237 2.100 3.500 0.612 -7.199 49.130 3.047 -0.236 3.184 -8.604 -0.731 49.625 7 PP_DT3DG4:DC13DA14_TT P 3 ? T 14 ? P 4 ? T 13 ? 1 C DG 4 1_555 D DC 13 1_555 C DA 5 1_555 D DT 12 1_555 0.008 0.142 3.204 -2.938 5.114 34.314 -0.528 -0.453 3.180 8.589 4.935 34.802 8 PP_DG4DA5:DT12DC13_TT P 4 ? T 13 ? P 5 ? T 12 ? 1 C DA 5 1_555 D DT 12 1_555 C DT 6 1_555 D DA 11 1_555 0.181 -0.607 3.210 2.114 0.343 27.523 -1.354 0.126 3.207 0.719 -4.434 27.605 9 PP_DA5DT6:DA11DT12_TT P 5 ? T 12 ? P 6 ? T 11 ? 1 C DT 6 1_555 D DA 11 1_555 C DG 7 1_555 D DT 10 1_555 -0.014 -0.218 3.563 -2.449 8.212 38.817 -1.358 -0.289 3.443 12.176 3.632 39.716 10 PP_DT6DG7:DT10DA11_TT P 6 ? T 11 ? P 7 ? T 10 ? 1 C DG 7 1_555 D DT 10 1_555 C DC 8 1_555 D DG 9 1_555 -0.185 -0.343 3.207 -0.391 2.229 31.813 -1.021 0.267 3.179 4.059 0.712 31.891 11 PP_DG7DC8:DG9DT10_TT P 7 ? T 10 ? P 8 ? T 9 ? 1 C DC 8 1_555 D DG 9 1_555 C DG 9 1_555 D DC 8 1_555 0.774 0.404 3.372 2.201 5.675 32.772 -0.286 -0.965 3.435 9.951 -3.860 33.317 12 PP_DC8DG9:DC8DG9_TT P 8 ? T 9 ? P 9 ? T 8 ? 1 C DG 9 1_555 D DC 8 1_555 C DC 10 1_555 D DG 7 1_555 0.695 -0.455 3.086 3.286 5.327 29.477 -1.902 -0.704 3.017 10.323 -6.368 30.120 13 PP_DG9DC10:DG7DC8_TT P 9 ? T 8 ? P 10 ? T 7 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 ;2'-DEOXYADENOSINE 5'-TRIPHOSPHATE ; DTP 6 'MANGANESE (II) ION' MN 7 'SODIUM ION' NA 8 water HOH #