HEADER TRANSFERASE 08-MAY-13 4KMI TITLE CRYSTAL STRUCTURE OF 4-O-BETA-D-MANNOSYL-D-GLUCOSE PHOSPHORYLASE MGP TITLE 2 COMPLEXED WITH PO4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 4-O-BETA-D-MANNOSYL-D-GLUCOSE PHOSPHORYLASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MGP, MANNOSYLGLUCOSE PHOSPHORYLASE; COMPND 5 EC: 2.4.1.281; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES FRAGILIS; SOURCE 3 ORGANISM_TAXID: 272559; SOURCE 4 STRAIN: NCTC 9343; SOURCE 5 GENE: BF0772; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-23A(+) KEYWDS 5-BLADED BETA PROPELLER FOLD, PHOSPHORYLASE, MANNAN BIODEGRADATION, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.NAKAE,S.ITO,M.HIGA,T.SENOURA,J.WASAKI,A.HIJIKATA,M.SHIONYU,S.ITO, AUTHOR 2 T.SHIRAI REVDAT 3 08-NOV-23 4KMI 1 REMARK REVDAT 2 20-NOV-13 4KMI 1 JRNL REVDAT 1 04-SEP-13 4KMI 0 JRNL AUTH S.NAKAE,S.ITO,M.HIGA,T.SENOURA,J.WASAKI,A.HIJIKATA, JRNL AUTH 2 M.SHIONYU,S.ITO,T.SHIRAI JRNL TITL STRUCTURE OF NOVEL ENZYME IN MANNAN BIODEGRADATION PROCESS JRNL TITL 2 4-O-BETA-D-MANNOSYL-D-GLUCOSE PHOSPHORYLASE MGP JRNL REF J.MOL.BIOL. V. 425 4468 2013 JRNL REFN ISSN 0022-2836 JRNL PMID 23954514 JRNL DOI 10.1016/J.JMB.2013.08.002 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.47 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 72274 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 3646 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.4790 - 5.3276 1.00 2658 139 0.2418 0.2566 REMARK 3 2 5.3276 - 4.2309 1.00 2657 111 0.1855 0.2063 REMARK 3 3 4.2309 - 3.6968 1.00 2621 148 0.1777 0.2000 REMARK 3 4 3.6968 - 3.3590 1.00 2662 134 0.1816 0.1971 REMARK 3 5 3.3590 - 3.1184 1.00 2647 126 0.1882 0.2466 REMARK 3 6 3.1184 - 2.9347 1.00 2648 127 0.1954 0.2327 REMARK 3 7 2.9347 - 2.7878 1.00 2634 161 0.1955 0.2174 REMARK 3 8 2.7878 - 2.6665 1.00 2612 144 0.1897 0.2456 REMARK 3 9 2.6665 - 2.5638 1.00 2641 144 0.1960 0.2404 REMARK 3 10 2.5638 - 2.4754 1.00 2654 148 0.1857 0.2540 REMARK 3 11 2.4754 - 2.3980 1.00 2656 136 0.1888 0.2592 REMARK 3 12 2.3980 - 2.3295 1.00 2617 140 0.1801 0.2389 REMARK 3 13 2.3295 - 2.2682 1.00 2667 120 0.1755 0.2415 REMARK 3 14 2.2682 - 2.2128 1.00 2654 134 0.1767 0.2262 REMARK 3 15 2.2128 - 2.1625 1.00 2613 136 0.1775 0.2461 REMARK 3 16 2.1625 - 2.1165 1.00 2670 135 0.1750 0.2452 REMARK 3 17 2.1165 - 2.0742 1.00 2639 142 0.1614 0.2063 REMARK 3 18 2.0742 - 2.0350 1.00 2663 140 0.1672 0.2236 REMARK 3 19 2.0350 - 1.9987 1.00 2611 138 0.1756 0.2173 REMARK 3 20 1.9987 - 1.9648 1.00 2620 156 0.1861 0.2394 REMARK 3 21 1.9648 - 1.9331 1.00 2642 158 0.1868 0.2497 REMARK 3 22 1.9331 - 1.9034 1.00 2655 137 0.1890 0.2812 REMARK 3 23 1.9034 - 1.8754 1.00 2614 135 0.1977 0.2393 REMARK 3 24 1.8754 - 1.8490 1.00 2623 162 0.2020 0.2363 REMARK 3 25 1.8490 - 1.8240 1.00 2610 149 0.2153 0.2936 REMARK 3 26 1.8240 - 1.8003 1.00 2640 146 0.2401 0.3057 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.810 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 6250 REMARK 3 ANGLE : 1.146 8492 REMARK 3 CHIRALITY : 0.079 912 REMARK 3 PLANARITY : 0.005 1094 REMARK 3 DIHEDRAL : 13.244 2274 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4KMI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000079523. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-NOV-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.15 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL38B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 72284 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.36200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: 1VKD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0M AMMONIUM SULFATE, 2.0M AMMONIUM REMARK 280 DIPHOSPHATE, PH 5.15, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 41.23450 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 23.80675 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 102.57633 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 41.23450 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 23.80675 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 102.57633 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 41.23450 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 23.80675 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 102.57633 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 47.61350 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 205.15267 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 47.61350 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 205.15267 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 47.61350 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 205.15267 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 36290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 81110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -358.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 787 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 909 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 718 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 754 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 212 REMARK 465 GLY A 213 REMARK 465 PHE A 214 REMARK 465 ILE A 215 REMARK 465 ASP A 216 REMARK 465 THR A 217 REMARK 465 GLY A 218 REMARK 465 SER A 219 REMARK 465 MET B 1 REMARK 465 ASP B 212 REMARK 465 GLY B 213 REMARK 465 PHE B 214 REMARK 465 ILE B 215 REMARK 465 ASP B 216 REMARK 465 THR B 217 REMARK 465 GLY B 218 REMARK 465 SER B 219 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 73 74.50 11.62 REMARK 500 ASP A 131 60.94 64.05 REMARK 500 ARG A 209 81.14 -152.21 REMARK 500 HIS A 233 55.33 -142.26 REMARK 500 ASN B 73 72.57 13.33 REMARK 500 ASP B 131 61.78 62.53 REMARK 500 HIS B 233 56.11 -146.18 REMARK 500 PRO B 296 -7.57 -59.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD B 404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3WAS RELATED DB: PDB REMARK 900 RELATED ID: 3WAT RELATED DB: PDB REMARK 900 RELATED ID: 3WAU RELATED DB: PDB DBREF 4KMI A 1 390 UNP Q5LH68 MGP_BACFN 1 390 DBREF 4KMI B 1 390 UNP Q5LH68 MGP_BACFN 1 390 SEQRES 1 A 390 MET SER LEU PHE ASN ASP LYS VAL ALA LYS LEU LEU ALA SEQRES 2 A 390 GLY HIS GLU ALA LEU LEU MET ARG LYS ASN GLU PRO VAL SEQRES 3 A 390 GLU GLU GLY ASN GLY VAL ILE THR ARG TYR ARG TYR PRO SEQRES 4 A 390 VAL LEU THR ALA ALA HIS THR PRO VAL PHE TRP ARG TYR SEQRES 5 A 390 ASP LEU ASN GLU GLU THR ASN PRO PHE LEU MET GLU ARG SEQRES 6 A 390 ILE GLY MET ASN ALA THR LEU ASN ALA GLY ALA ILE LYS SEQRES 7 A 390 TRP ASP GLY LYS TYR LEU MET LEU VAL ARG VAL GLU GLY SEQRES 8 A 390 ALA ASP ARG LYS SER PHE PHE ALA VAL ALA GLU SER PRO SEQRES 9 A 390 ASN GLY ILE ASP ASN PHE ARG PHE TRP GLU TYR PRO VAL SEQRES 10 A 390 THR LEU PRO GLU ASP VAL VAL PRO ALA THR ASN VAL TYR SEQRES 11 A 390 ASP MET ARG LEU THR ALA HIS GLU ASP GLY TRP ILE TYR SEQRES 12 A 390 GLY ILE PHE CYS ALA GLU ARG HIS ASP ASP ASN ALA PRO SEQRES 13 A 390 ILE GLY ASP LEU SER SER ALA THR ALA THR ALA GLY ILE SEQRES 14 A 390 ALA ARG THR LYS ASP LEU LYS ASN TRP GLU ARG LEU PRO SEQRES 15 A 390 ASP LEU LYS THR LYS SER GLN GLN ARG ASN VAL VAL LEU SEQRES 16 A 390 HIS PRO GLU PHE VAL ASP GLY LYS TYR ALA LEU TYR THR SEQRES 17 A 390 ARG PRO GLN ASP GLY PHE ILE ASP THR GLY SER GLY GLY SEQRES 18 A 390 GLY ILE GLY TRP ALA LEU ILE ASP ASP ILE THR HIS ALA SEQRES 19 A 390 GLU VAL GLY GLU GLU LYS ILE ILE ASP LYS ARG TYR TYR SEQRES 20 A 390 HIS THR ILE LYS GLU VAL LYS ASN GLY GLU GLY PRO HIS SEQRES 21 A 390 PRO ILE LYS THR PRO GLN GLY TRP LEU HIS LEU ALA HIS SEQRES 22 A 390 GLY VAL ARG ASN CYS ALA ALA GLY LEU ARG TYR VAL LEU SEQRES 23 A 390 TYR MET TYR MET THR SER LEU ASP ASP PRO THR ARG LEU SEQRES 24 A 390 ILE ALA SER PRO ALA GLY TYR PHE MET ALA PRO VAL GLY SEQRES 25 A 390 GLU GLU ARG ILE GLY ASP VAL SER ASN VAL LEU PHE SER SEQRES 26 A 390 ASN GLY TRP ILE ALA ASP ASP ASP GLY LYS VAL PHE ILE SEQRES 27 A 390 TYR TYR ALA SER SER ASP THR ARG MET HIS VAL ALA THR SEQRES 28 A 390 SER THR ILE GLU ARG LEU VAL ASP TYR CYS LEU HIS THR SEQRES 29 A 390 PRO GLN ASP GLY PHE SER SER SER ALA SER VAL GLU ILE SEQRES 30 A 390 LEU LYS ASN LEU ILE GLU ARG ASN LEU ARG LEU MET LYS SEQRES 1 B 390 MET SER LEU PHE ASN ASP LYS VAL ALA LYS LEU LEU ALA SEQRES 2 B 390 GLY HIS GLU ALA LEU LEU MET ARG LYS ASN GLU PRO VAL SEQRES 3 B 390 GLU GLU GLY ASN GLY VAL ILE THR ARG TYR ARG TYR PRO SEQRES 4 B 390 VAL LEU THR ALA ALA HIS THR PRO VAL PHE TRP ARG TYR SEQRES 5 B 390 ASP LEU ASN GLU GLU THR ASN PRO PHE LEU MET GLU ARG SEQRES 6 B 390 ILE GLY MET ASN ALA THR LEU ASN ALA GLY ALA ILE LYS SEQRES 7 B 390 TRP ASP GLY LYS TYR LEU MET LEU VAL ARG VAL GLU GLY SEQRES 8 B 390 ALA ASP ARG LYS SER PHE PHE ALA VAL ALA GLU SER PRO SEQRES 9 B 390 ASN GLY ILE ASP ASN PHE ARG PHE TRP GLU TYR PRO VAL SEQRES 10 B 390 THR LEU PRO GLU ASP VAL VAL PRO ALA THR ASN VAL TYR SEQRES 11 B 390 ASP MET ARG LEU THR ALA HIS GLU ASP GLY TRP ILE TYR SEQRES 12 B 390 GLY ILE PHE CYS ALA GLU ARG HIS ASP ASP ASN ALA PRO SEQRES 13 B 390 ILE GLY ASP LEU SER SER ALA THR ALA THR ALA GLY ILE SEQRES 14 B 390 ALA ARG THR LYS ASP LEU LYS ASN TRP GLU ARG LEU PRO SEQRES 15 B 390 ASP LEU LYS THR LYS SER GLN GLN ARG ASN VAL VAL LEU SEQRES 16 B 390 HIS PRO GLU PHE VAL ASP GLY LYS TYR ALA LEU TYR THR SEQRES 17 B 390 ARG PRO GLN ASP GLY PHE ILE ASP THR GLY SER GLY GLY SEQRES 18 B 390 GLY ILE GLY TRP ALA LEU ILE ASP ASP ILE THR HIS ALA SEQRES 19 B 390 GLU VAL GLY GLU GLU LYS ILE ILE ASP LYS ARG TYR TYR SEQRES 20 B 390 HIS THR ILE LYS GLU VAL LYS ASN GLY GLU GLY PRO HIS SEQRES 21 B 390 PRO ILE LYS THR PRO GLN GLY TRP LEU HIS LEU ALA HIS SEQRES 22 B 390 GLY VAL ARG ASN CYS ALA ALA GLY LEU ARG TYR VAL LEU SEQRES 23 B 390 TYR MET TYR MET THR SER LEU ASP ASP PRO THR ARG LEU SEQRES 24 B 390 ILE ALA SER PRO ALA GLY TYR PHE MET ALA PRO VAL GLY SEQRES 25 B 390 GLU GLU ARG ILE GLY ASP VAL SER ASN VAL LEU PHE SER SEQRES 26 B 390 ASN GLY TRP ILE ALA ASP ASP ASP GLY LYS VAL PHE ILE SEQRES 27 B 390 TYR TYR ALA SER SER ASP THR ARG MET HIS VAL ALA THR SEQRES 28 B 390 SER THR ILE GLU ARG LEU VAL ASP TYR CYS LEU HIS THR SEQRES 29 B 390 PRO GLN ASP GLY PHE SER SER SER ALA SER VAL GLU ILE SEQRES 30 B 390 LEU LYS ASN LEU ILE GLU ARG ASN LEU ARG LEU MET LYS HET PO4 A 401 5 HET PO4 A 402 5 HET PO4 A 403 5 HET MPD A 404 8 HET PO4 B 401 5 HET PO4 B 402 5 HET PO4 B 403 5 HET MPD B 404 8 HETNAM PO4 PHOSPHATE ION HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL FORMUL 3 PO4 6(O4 P 3-) FORMUL 6 MPD 2(C6 H14 O2) FORMUL 11 HOH *940(H2 O) HELIX 1 1 SER A 2 ARG A 21 1 20 HELIX 2 2 THR A 42 THR A 46 5 5 HELIX 3 3 PRO A 47 TYR A 52 1 6 HELIX 4 4 ASP A 230 ALA A 234 5 5 HELIX 5 5 VAL A 311 ILE A 316 5 6 HELIX 6 6 ILE A 354 THR A 364 1 11 HELIX 7 7 SER A 370 LYS A 390 1 21 HELIX 8 8 LEU B 3 ARG B 21 1 19 HELIX 9 9 THR B 42 THR B 46 5 5 HELIX 10 10 PRO B 47 TYR B 52 1 6 HELIX 11 11 ASP B 230 ALA B 234 5 5 HELIX 12 12 VAL B 311 ILE B 316 5 6 HELIX 13 13 ILE B 354 THR B 364 1 11 HELIX 14 14 SER B 370 LYS B 390 1 21 SHEET 1 A 4 THR A 34 ARG A 35 0 SHEET 2 A 4 ARG A 346 THR A 353 -1 O THR A 351 N THR A 34 SHEET 3 A 4 LYS A 335 SER A 342 -1 N ILE A 338 O ALA A 350 SHEET 4 A 4 LEU A 323 ALA A 330 -1 N ILE A 329 O PHE A 337 SHEET 1 B 4 MET A 68 TRP A 79 0 SHEET 2 B 4 LYS A 82 GLY A 91 -1 O ARG A 88 N LEU A 72 SHEET 3 B 4 SER A 96 SER A 103 -1 O SER A 103 N TYR A 83 SHEET 4 B 4 ARG A 111 PHE A 112 -1 O ARG A 111 N GLU A 102 SHEET 1 C 4 ASN A 128 ALA A 136 0 SHEET 2 C 4 ILE A 142 HIS A 151 -1 O GLU A 149 N ASN A 128 SHEET 3 C 4 ALA A 163 THR A 172 -1 O ALA A 170 N GLY A 144 SHEET 4 C 4 TRP A 178 ARG A 180 -1 O GLU A 179 N ARG A 171 SHEET 1 D 2 GLN A 189 GLN A 190 0 SHEET 2 D 2 PRO A 210 GLN A 211 -1 O GLN A 211 N GLN A 189 SHEET 1 E 4 VAL A 194 LEU A 195 0 SHEET 2 E 4 TYR A 204 THR A 208 -1 O TYR A 207 N VAL A 194 SHEET 3 E 4 GLY A 222 ILE A 228 -1 O ILE A 228 N TYR A 204 SHEET 4 E 4 LYS A 240 LYS A 244 -1 O ILE A 242 N ILE A 223 SHEET 1 F 3 LYS A 254 GLU A 257 0 SHEET 2 F 3 GLY A 267 CYS A 278 -1 O VAL A 275 N LYS A 254 SHEET 3 F 3 ILE A 262 THR A 264 -1 N ILE A 262 O LEU A 269 SHEET 1 G 4 LYS A 254 GLU A 257 0 SHEET 2 G 4 GLY A 267 CYS A 278 -1 O VAL A 275 N LYS A 254 SHEET 3 G 4 GLY A 281 THR A 291 -1 O TYR A 287 N ALA A 272 SHEET 4 G 4 LEU A 299 ALA A 301 -1 O ILE A 300 N MET A 290 SHEET 1 H 4 THR B 34 ARG B 35 0 SHEET 2 H 4 ARG B 346 THR B 353 -1 O THR B 351 N THR B 34 SHEET 3 H 4 LYS B 335 SER B 342 -1 N ILE B 338 O ALA B 350 SHEET 4 H 4 LEU B 323 ALA B 330 -1 N PHE B 324 O ALA B 341 SHEET 1 I 4 MET B 68 TRP B 79 0 SHEET 2 I 4 LYS B 82 GLY B 91 -1 O ARG B 88 N LEU B 72 SHEET 3 I 4 SER B 96 SER B 103 -1 O PHE B 97 N VAL B 89 SHEET 4 I 4 ARG B 111 PHE B 112 -1 O ARG B 111 N GLU B 102 SHEET 1 J 4 ASN B 128 ALA B 136 0 SHEET 2 J 4 ILE B 142 HIS B 151 -1 O CYS B 147 N TYR B 130 SHEET 3 J 4 ALA B 163 THR B 172 -1 O THR B 164 N ARG B 150 SHEET 4 J 4 TRP B 178 ARG B 180 -1 O GLU B 179 N ARG B 171 SHEET 1 K 2 GLN B 189 GLN B 190 0 SHEET 2 K 2 PRO B 210 GLN B 211 -1 O GLN B 211 N GLN B 189 SHEET 1 L 4 VAL B 194 LEU B 195 0 SHEET 2 L 4 TYR B 204 THR B 208 -1 O TYR B 207 N VAL B 194 SHEET 3 L 4 GLY B 222 ILE B 228 -1 O ILE B 228 N TYR B 204 SHEET 4 L 4 GLU B 239 LYS B 244 -1 O ILE B 242 N ILE B 223 SHEET 1 M 3 LYS B 254 GLU B 257 0 SHEET 2 M 3 GLY B 267 CYS B 278 -1 O VAL B 275 N LYS B 254 SHEET 3 M 3 ILE B 262 THR B 264 -1 N ILE B 262 O LEU B 269 SHEET 1 N 4 LYS B 254 GLU B 257 0 SHEET 2 N 4 GLY B 267 CYS B 278 -1 O VAL B 275 N LYS B 254 SHEET 3 N 4 GLY B 281 THR B 291 -1 O THR B 291 N TRP B 268 SHEET 4 N 4 LEU B 299 ALA B 301 -1 O ILE B 300 N MET B 290 SITE 1 AC1 9 ARG A 191 ASN A 192 ARG A 209 LYS A 254 SITE 2 AC1 9 HIS A 273 TYR A 284 PHE A 324 HOH A 763 SITE 3 AC1 9 HOH A 910 SITE 1 AC2 5 VAL A 311 GLY A 312 ARG A 315 HOH A 537 SITE 2 AC2 5 HOH A 675 SITE 1 AC3 9 HIS A 15 GLU A 16 LEU A 19 PRO A 47 SITE 2 AC3 9 ARG A 111 HOH A 564 HOH A 745 HOH A 773 SITE 3 AC3 9 HOH A 869 SITE 1 AC4 10 ARG A 88 ARG A 94 ASN A 128 TYR A 130 SITE 2 AC4 10 GLU A 149 HIS A 248 ARG A 276 HOH A 615 SITE 3 AC4 10 HOH A 715 HOH A 751 SITE 1 AC5 9 ARG B 191 ASN B 192 ARG B 209 LYS B 254 SITE 2 AC5 9 HIS B 273 TYR B 284 PHE B 324 HOH B 752 SITE 3 AC5 9 HOH B 863 SITE 1 AC6 5 VAL B 311 GLY B 312 ARG B 315 HOH B 563 SITE 2 AC6 5 HOH B 805 SITE 1 AC7 9 HIS B 15 GLU B 16 LEU B 19 PRO B 47 SITE 2 AC7 9 PHE B 49 ARG B 111 HOH B 573 HOH B 827 SITE 3 AC7 9 HOH B 906 SITE 1 AC8 9 ARG B 88 ARG B 94 ASN B 128 TYR B 130 SITE 2 AC8 9 GLU B 149 HIS B 248 ARG B 276 HOH B 584 SITE 3 AC8 9 HOH B 645 CRYST1 82.469 82.469 307.729 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012126 0.007001 0.000000 0.00000 SCALE2 0.000000 0.014002 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003250 0.00000