HEADER HYDROLASE/SUBSTRATE 10-MAY-13 4KNL TITLE CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS HYDROLASE AMIA IN COMPLEX TITLE 2 WITH ITS LIGAND COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIFUNCTIONAL AUTOLYSIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: UNP RESIDUES 198-421; COMPND 5 EC: 3.5.1.28,3.2.1.96; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: MURAMYL TETRAPEPTIDE; COMPND 9 CHAIN: F, G; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS NCTC 8325; SOURCE 3 ORGANISM_TAXID: 93061; SOURCE 4 STRAIN: NCTC 8325; SOURCE 5 GENE: ATL, NAG, SAOUHSC_00994; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-4T3; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630 KEYWDS PEPTIDOGLYCAN, LIGAND COMPLEX, AUTOLYSIN, AMIDASE, N-ACETYLMURAMOYL- KEYWDS 2 L-ALANINE AMIDASE, HYDROLASE-SUBSTRATE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR F.M.BUETTNER,T.STEHLE REVDAT 6 15-NOV-23 4KNL 1 LINK ATOM REVDAT 5 20-SEP-23 4KNL 1 REMARK REVDAT 4 01-MAR-23 4KNL 1 COMPND SOURCE REMARK DBREF REVDAT 4 2 1 SEQRES HETSYN LINK ATOM REVDAT 3 29-JUL-20 4KNL 1 REMARK SEQADV HETNAM LINK REVDAT 3 2 1 SITE REVDAT 2 03-DEC-14 4KNL 1 JRNL REVDAT 1 12-MAR-14 4KNL 0 JRNL AUTH F.M.BUTTNER,S.ZOLL,M.NEGA,F.GOTZ,T.STEHLE JRNL TITL STRUCTURE-FUNCTION ANALYSIS OF STAPHYLOCOCCUS AUREUS AMIDASE JRNL TITL 2 REVEALS THE DETERMINANTS OF PEPTIDOGLYCAN RECOGNITION AND JRNL TITL 3 CLEAVAGE. JRNL REF J.BIOL.CHEM. V. 289 11083 2014 JRNL REFN ISSN 0021-9258 JRNL PMID 24599952 JRNL DOI 10.1074/JBC.M114.557306 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.21 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 122657 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6129 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.2319 - 4.8146 0.99 3971 208 0.1798 0.2034 REMARK 3 2 4.8146 - 3.8219 0.99 3919 206 0.1383 0.1498 REMARK 3 3 3.8219 - 3.3390 0.99 3906 205 0.1448 0.1585 REMARK 3 4 3.3390 - 3.0337 1.00 3913 206 0.1520 0.1594 REMARK 3 5 3.0337 - 2.8163 1.00 3896 206 0.1606 0.1797 REMARK 3 6 2.8163 - 2.6503 1.00 3901 204 0.1592 0.1791 REMARK 3 7 2.6503 - 2.5176 1.00 3875 204 0.1565 0.1784 REMARK 3 8 2.5176 - 2.4080 1.00 3911 205 0.1614 0.2114 REMARK 3 9 2.4080 - 2.3153 0.99 3885 204 0.1570 0.2018 REMARK 3 10 2.3153 - 2.2354 1.00 3888 205 0.1611 0.1888 REMARK 3 11 2.2354 - 2.1655 1.00 3901 206 0.1516 0.1737 REMARK 3 12 2.1655 - 2.1036 1.00 3900 205 0.1505 0.2000 REMARK 3 13 2.1036 - 2.0482 1.00 3885 202 0.1554 0.1985 REMARK 3 14 2.0482 - 1.9982 1.00 3864 204 0.1620 0.2125 REMARK 3 15 1.9982 - 1.9528 1.00 3905 206 0.1599 0.1905 REMARK 3 16 1.9528 - 1.9112 1.00 3891 204 0.1759 0.2375 REMARK 3 17 1.9112 - 1.8730 1.00 3896 206 0.1711 0.2053 REMARK 3 18 1.8730 - 1.8377 1.00 3881 204 0.1845 0.2310 REMARK 3 19 1.8377 - 1.8048 1.00 3873 203 0.1926 0.2348 REMARK 3 20 1.8048 - 1.7743 1.00 3883 204 0.2065 0.2424 REMARK 3 21 1.7743 - 1.7456 1.00 3865 204 0.2162 0.2574 REMARK 3 22 1.7456 - 1.7188 1.00 3880 204 0.2248 0.2726 REMARK 3 23 1.7188 - 1.6935 1.00 3860 203 0.2348 0.2599 REMARK 3 24 1.6935 - 1.6696 1.00 3907 206 0.2282 0.2516 REMARK 3 25 1.6696 - 1.6471 1.00 3871 204 0.2312 0.2742 REMARK 3 26 1.6471 - 1.6257 0.99 3872 204 0.2364 0.2565 REMARK 3 27 1.6257 - 1.6054 0.99 3890 204 0.2568 0.2774 REMARK 3 28 1.6054 - 1.5860 0.99 3845 203 0.2675 0.3149 REMARK 3 29 1.5860 - 1.5676 0.99 3818 201 0.2815 0.3219 REMARK 3 30 1.5676 - 1.5500 0.97 3776 199 0.3113 0.3129 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 6879 REMARK 3 ANGLE : 1.382 9390 REMARK 3 CHIRALITY : 0.095 965 REMARK 3 PLANARITY : 0.008 1239 REMARK 3 DIHEDRAL : 15.229 2390 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 32 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 213 THROUGH 223 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.0551 4.9915 82.9532 REMARK 3 T TENSOR REMARK 3 T11: 0.2145 T22: 0.2696 REMARK 3 T33: 0.4887 T12: 0.1309 REMARK 3 T13: -0.0645 T23: -0.0637 REMARK 3 L TENSOR REMARK 3 L11: 0.8593 L22: 2.1293 REMARK 3 L33: 1.3590 L12: -1.2048 REMARK 3 L13: -0.9064 L23: 0.8672 REMARK 3 S TENSOR REMARK 3 S11: 0.0916 S12: 0.0956 S13: -0.0875 REMARK 3 S21: 0.0582 S22: -0.0410 S23: -1.1147 REMARK 3 S31: 0.0437 S32: 0.6590 S33: 0.1231 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 224 THROUGH 301 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.2093 12.2634 78.2249 REMARK 3 T TENSOR REMARK 3 T11: 0.1502 T22: 0.1323 REMARK 3 T33: 0.2232 T12: 0.0061 REMARK 3 T13: 0.0097 T23: -0.0168 REMARK 3 L TENSOR REMARK 3 L11: 1.0862 L22: 0.5347 REMARK 3 L33: 0.4597 L12: 0.5509 REMARK 3 L13: 0.3969 L23: 0.3700 REMARK 3 S TENSOR REMARK 3 S11: 0.0428 S12: -0.1486 S13: 0.1252 REMARK 3 S21: 0.0636 S22: -0.0694 S23: 0.0555 REMARK 3 S31: -0.0368 S32: -0.0978 S33: 0.0327 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 302 THROUGH 366 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.3373 11.9842 75.3694 REMARK 3 T TENSOR REMARK 3 T11: 0.1607 T22: 0.1299 REMARK 3 T33: 0.2275 T12: -0.0024 REMARK 3 T13: 0.0032 T23: -0.0107 REMARK 3 L TENSOR REMARK 3 L11: 0.9099 L22: 0.7273 REMARK 3 L33: 0.6039 L12: 0.5133 REMARK 3 L13: 0.3725 L23: 0.2797 REMARK 3 S TENSOR REMARK 3 S11: 0.0170 S12: 0.0323 S13: -0.0284 REMARK 3 S21: -0.0228 S22: 0.0021 S23: -0.0167 REMARK 3 S31: -0.0226 S32: 0.0462 S33: -0.0183 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 367 THROUGH 417 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.2210 15.5285 77.1841 REMARK 3 T TENSOR REMARK 3 T11: 0.1261 T22: 0.1050 REMARK 3 T33: 0.2191 T12: -0.0130 REMARK 3 T13: 0.0044 T23: -0.0192 REMARK 3 L TENSOR REMARK 3 L11: 1.6076 L22: 0.5771 REMARK 3 L33: 1.5950 L12: 0.5602 REMARK 3 L13: 0.3146 L23: 0.0959 REMARK 3 S TENSOR REMARK 3 S11: 0.0139 S12: 0.0351 S13: -0.0132 REMARK 3 S21: -0.0114 S22: 0.0332 S23: -0.0335 REMARK 3 S31: -0.0211 S32: 0.1331 S33: -0.0386 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 213 THROUGH 223 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.8704 3.8023 32.7878 REMARK 3 T TENSOR REMARK 3 T11: 0.2648 T22: 0.3676 REMARK 3 T33: 0.4290 T12: -0.0132 REMARK 3 T13: -0.0528 T23: 0.0482 REMARK 3 L TENSOR REMARK 3 L11: 2.6587 L22: 2.0165 REMARK 3 L33: 2.1486 L12: 1.4230 REMARK 3 L13: 0.0671 L23: -0.8321 REMARK 3 S TENSOR REMARK 3 S11: 0.4968 S12: 0.0125 S13: -0.3036 REMARK 3 S21: -0.2719 S22: -0.4180 S23: 0.7204 REMARK 3 S31: 0.1714 S32: -0.4068 S33: -0.0444 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 224 THROUGH 238 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.2862 5.5764 24.2372 REMARK 3 T TENSOR REMARK 3 T11: 0.3210 T22: 0.5314 REMARK 3 T33: 0.2246 T12: 0.0939 REMARK 3 T13: -0.0505 T23: -0.0299 REMARK 3 L TENSOR REMARK 3 L11: 5.2411 L22: 1.8960 REMARK 3 L33: 4.6137 L12: -1.4254 REMARK 3 L13: 0.9131 L23: 1.1725 REMARK 3 S TENSOR REMARK 3 S11: 0.2822 S12: 0.9866 S13: -0.3828 REMARK 3 S21: 0.1790 S22: -0.0751 S23: 0.0531 REMARK 3 S31: 0.2438 S32: 0.0567 S33: -0.1922 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 239 THROUGH 251 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.6667 7.1273 42.2510 REMARK 3 T TENSOR REMARK 3 T11: 0.1929 T22: 0.2905 REMARK 3 T33: 0.3003 T12: 0.0170 REMARK 3 T13: -0.0078 T23: 0.0612 REMARK 3 L TENSOR REMARK 3 L11: 3.2822 L22: 2.7477 REMARK 3 L33: 3.5797 L12: 1.0027 REMARK 3 L13: -0.1741 L23: 2.3702 REMARK 3 S TENSOR REMARK 3 S11: -0.1143 S12: 0.4651 S13: 0.2034 REMARK 3 S21: -0.1676 S22: 0.0328 S23: -0.0684 REMARK 3 S31: -0.1068 S32: 0.3506 S33: 0.0660 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 252 THROUGH 273 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4789 13.4799 43.5158 REMARK 3 T TENSOR REMARK 3 T11: 0.1737 T22: 0.2345 REMARK 3 T33: 0.2610 T12: 0.0167 REMARK 3 T13: 0.0028 T23: 0.0777 REMARK 3 L TENSOR REMARK 3 L11: 1.7941 L22: 1.3697 REMARK 3 L33: 0.1860 L12: -0.4489 REMARK 3 L13: 0.4844 L23: 0.2573 REMARK 3 S TENSOR REMARK 3 S11: 0.0116 S12: 0.5023 S13: 0.3469 REMARK 3 S21: -0.2098 S22: -0.1141 S23: -0.1794 REMARK 3 S31: -0.0334 S32: 0.1451 S33: 0.0539 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 274 THROUGH 283 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.3433 15.3284 33.1915 REMARK 3 T TENSOR REMARK 3 T11: 0.2003 T22: 0.6255 REMARK 3 T33: 0.4188 T12: -0.0046 REMARK 3 T13: 0.0587 T23: 0.2403 REMARK 3 L TENSOR REMARK 3 L11: 4.0836 L22: 1.1922 REMARK 3 L33: 2.7534 L12: -0.8698 REMARK 3 L13: 0.7878 L23: -1.4695 REMARK 3 S TENSOR REMARK 3 S11: -0.0424 S12: 0.9277 S13: 0.5376 REMARK 3 S21: -0.0732 S22: -0.1975 S23: -0.5772 REMARK 3 S31: -0.1277 S32: 0.4069 S33: 0.2229 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 284 THROUGH 312 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.4214 11.3595 40.0011 REMARK 3 T TENSOR REMARK 3 T11: 0.1325 T22: 0.3064 REMARK 3 T33: 0.2620 T12: 0.0223 REMARK 3 T13: 0.0163 T23: 0.0935 REMARK 3 L TENSOR REMARK 3 L11: 0.6973 L22: 3.1941 REMARK 3 L33: 4.1471 L12: -0.7171 REMARK 3 L13: -0.8172 L23: 0.5556 REMARK 3 S TENSOR REMARK 3 S11: 0.1315 S12: 0.6331 S13: 0.3243 REMARK 3 S21: -0.1805 S22: -0.1749 S23: -0.4130 REMARK 3 S31: -0.1357 S32: 0.1202 S33: 0.0015 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 313 THROUGH 351 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.2890 11.3579 35.3487 REMARK 3 T TENSOR REMARK 3 T11: 0.1740 T22: 0.3301 REMARK 3 T33: 0.1833 T12: 0.0539 REMARK 3 T13: 0.0151 T23: 0.0484 REMARK 3 L TENSOR REMARK 3 L11: 2.1248 L22: 1.4153 REMARK 3 L33: 2.5297 L12: -0.7297 REMARK 3 L13: 0.8240 L23: -0.6598 REMARK 3 S TENSOR REMARK 3 S11: 0.1118 S12: 0.6967 S13: 0.1251 REMARK 3 S21: -0.2394 S22: -0.1414 S23: -0.0845 REMARK 3 S31: -0.0097 S32: 0.0788 S33: 0.0580 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 352 THROUGH 366 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.0400 11.7868 46.6636 REMARK 3 T TENSOR REMARK 3 T11: 0.2332 T22: 0.2132 REMARK 3 T33: 0.2318 T12: 0.0325 REMARK 3 T13: 0.0112 T23: 0.0007 REMARK 3 L TENSOR REMARK 3 L11: 5.7153 L22: 5.6967 REMARK 3 L33: 0.8790 L12: -5.5939 REMARK 3 L13: 2.0660 L23: -2.2046 REMARK 3 S TENSOR REMARK 3 S11: -0.1266 S12: -0.0822 S13: -0.0645 REMARK 3 S21: 0.2533 S22: 0.1439 S23: 0.2721 REMARK 3 S31: -0.1332 S32: -0.1747 S33: -0.0383 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 367 THROUGH 395 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.6589 22.0624 39.1365 REMARK 3 T TENSOR REMARK 3 T11: 0.1843 T22: 0.2457 REMARK 3 T33: 0.2791 T12: 0.0394 REMARK 3 T13: -0.0086 T23: 0.0873 REMARK 3 L TENSOR REMARK 3 L11: 2.1052 L22: 2.2306 REMARK 3 L33: 3.7186 L12: -0.2748 REMARK 3 L13: 0.9612 L23: 0.6101 REMARK 3 S TENSOR REMARK 3 S11: -0.0244 S12: 0.5653 S13: 0.6568 REMARK 3 S21: -0.0520 S22: -0.0553 S23: -0.1727 REMARK 3 S31: -0.2776 S32: 0.0201 S33: 0.1279 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 396 THROUGH 417 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.8931 4.6254 36.2913 REMARK 3 T TENSOR REMARK 3 T11: 0.1796 T22: 0.2374 REMARK 3 T33: 0.2024 T12: 0.0243 REMARK 3 T13: -0.0372 T23: -0.0180 REMARK 3 L TENSOR REMARK 3 L11: 3.4526 L22: 8.9096 REMARK 3 L33: 4.5675 L12: 0.0806 REMARK 3 L13: -0.1675 L23: -3.1884 REMARK 3 S TENSOR REMARK 3 S11: 0.1598 S12: 0.3485 S13: -0.3375 REMARK 3 S21: -0.4274 S22: -0.0456 S23: 0.3396 REMARK 3 S31: 0.3675 S32: -0.1191 S33: -0.1078 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 213 THROUGH 223 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.4927 -2.5663 82.6717 REMARK 3 T TENSOR REMARK 3 T11: 0.2043 T22: 0.3837 REMARK 3 T33: 0.4168 T12: 0.1025 REMARK 3 T13: 0.1609 T23: 0.0344 REMARK 3 L TENSOR REMARK 3 L11: 2.7235 L22: 4.8967 REMARK 3 L33: 1.3301 L12: -1.9530 REMARK 3 L13: 1.3777 L23: -0.0996 REMARK 3 S TENSOR REMARK 3 S11: 0.2413 S12: -0.0673 S13: 0.1644 REMARK 3 S21: 0.4351 S22: 0.1695 S23: 0.4483 REMARK 3 S31: -0.4285 S32: -0.6882 S33: -0.0724 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 224 THROUGH 251 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.2389 -5.4848 81.3413 REMARK 3 T TENSOR REMARK 3 T11: 0.1893 T22: 0.2051 REMARK 3 T33: 0.2475 T12: -0.0011 REMARK 3 T13: 0.0184 T23: -0.0351 REMARK 3 L TENSOR REMARK 3 L11: 2.0233 L22: 0.7465 REMARK 3 L33: 0.6476 L12: 1.0051 REMARK 3 L13: -0.9354 L23: -0.5659 REMARK 3 S TENSOR REMARK 3 S11: 0.1955 S12: -0.2985 S13: 0.2706 REMARK 3 S21: 0.1787 S22: -0.0630 S23: 0.0627 REMARK 3 S31: -0.0680 S32: 0.0116 S33: -0.1587 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 252 THROUGH 273 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.1568 -11.1099 70.1266 REMARK 3 T TENSOR REMARK 3 T11: 0.1616 T22: 0.1256 REMARK 3 T33: 0.1871 T12: 0.0081 REMARK 3 T13: 0.0214 T23: -0.0474 REMARK 3 L TENSOR REMARK 3 L11: 2.9098 L22: 0.2946 REMARK 3 L33: 1.2730 L12: 0.6106 REMARK 3 L13: 0.3456 L23: 0.3984 REMARK 3 S TENSOR REMARK 3 S11: 0.0285 S12: 0.0151 S13: -0.1123 REMARK 3 S21: -0.1104 S22: 0.1409 S23: 0.1781 REMARK 3 S31: 0.1989 S32: -0.1701 S33: -0.2033 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 274 THROUGH 301 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.7084 -13.0592 77.5358 REMARK 3 T TENSOR REMARK 3 T11: 0.1249 T22: 0.1105 REMARK 3 T33: 0.1862 T12: 0.0037 REMARK 3 T13: -0.0113 T23: 0.0082 REMARK 3 L TENSOR REMARK 3 L11: 3.1511 L22: 2.7057 REMARK 3 L33: 1.7397 L12: -0.2000 REMARK 3 L13: -0.6940 L23: 0.6670 REMARK 3 S TENSOR REMARK 3 S11: 0.0890 S12: -0.1505 S13: -0.1126 REMARK 3 S21: -0.0132 S22: -0.0066 S23: -0.2082 REMARK 3 S31: 0.1143 S32: 0.0044 S33: -0.0988 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 302 THROUGH 352 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.4110 -9.2466 76.0966 REMARK 3 T TENSOR REMARK 3 T11: 0.1519 T22: 0.1384 REMARK 3 T33: 0.1852 T12: -0.0197 REMARK 3 T13: 0.0064 T23: -0.0178 REMARK 3 L TENSOR REMARK 3 L11: 1.5801 L22: 0.6659 REMARK 3 L33: 1.2263 L12: 0.3414 REMARK 3 L13: -0.5665 L23: -0.5903 REMARK 3 S TENSOR REMARK 3 S11: 0.0583 S12: -0.1053 S13: 0.0765 REMARK 3 S21: 0.0459 S22: -0.0370 S23: 0.0923 REMARK 3 S31: 0.0418 S32: -0.0456 S33: -0.0226 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 353 THROUGH 366 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.5366 -10.2777 67.7152 REMARK 3 T TENSOR REMARK 3 T11: 0.1874 T22: 0.2484 REMARK 3 T33: 0.2482 T12: -0.0495 REMARK 3 T13: -0.0076 T23: 0.0084 REMARK 3 L TENSOR REMARK 3 L11: 1.7282 L22: 5.9032 REMARK 3 L33: 2.6613 L12: 1.2227 REMARK 3 L13: -0.5005 L23: -2.6134 REMARK 3 S TENSOR REMARK 3 S11: -0.1502 S12: 0.2625 S13: 0.0682 REMARK 3 S21: -0.2786 S22: 0.3847 S23: 0.4717 REMARK 3 S31: 0.2205 S32: -0.2455 S33: -0.2424 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 367 THROUGH 395 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.9385 -20.0946 73.6522 REMARK 3 T TENSOR REMARK 3 T11: 0.1788 T22: 0.1571 REMARK 3 T33: 0.2525 T12: -0.0702 REMARK 3 T13: -0.0107 T23: -0.0304 REMARK 3 L TENSOR REMARK 3 L11: 1.9061 L22: 0.7064 REMARK 3 L33: 3.2049 L12: -0.2442 REMARK 3 L13: -0.9883 L23: -0.5213 REMARK 3 S TENSOR REMARK 3 S11: -0.0380 S12: 0.0928 S13: -0.4059 REMARK 3 S21: -0.1236 S22: -0.0079 S23: 0.0625 REMARK 3 S31: 0.2505 S32: -0.1014 S33: 0.0555 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 396 THROUGH 419 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.6776 -2.5264 79.8666 REMARK 3 T TENSOR REMARK 3 T11: 0.1438 T22: 0.1948 REMARK 3 T33: 0.2176 T12: 0.0035 REMARK 3 T13: 0.0316 T23: -0.0121 REMARK 3 L TENSOR REMARK 3 L11: 2.9939 L22: 3.6219 REMARK 3 L33: 4.9241 L12: -0.4752 REMARK 3 L13: -0.4617 L23: -0.2695 REMARK 3 S TENSOR REMARK 3 S11: 0.0798 S12: -0.1967 S13: 0.2397 REMARK 3 S21: 0.2105 S22: 0.0356 S23: 0.1265 REMARK 3 S31: -0.3759 S32: -0.2630 S33: -0.1045 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 214 THROUGH 223 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.8892 -5.8660 33.7311 REMARK 3 T TENSOR REMARK 3 T11: 0.2690 T22: 0.5632 REMARK 3 T33: 0.6245 T12: -0.0129 REMARK 3 T13: 0.0637 T23: -0.0586 REMARK 3 L TENSOR REMARK 3 L11: 3.2427 L22: 2.1532 REMARK 3 L33: 4.5484 L12: 2.4350 REMARK 3 L13: 0.0706 L23: -1.1586 REMARK 3 S TENSOR REMARK 3 S11: 0.3964 S12: 0.7840 S13: -0.1744 REMARK 3 S21: 0.0480 S22: -0.2424 S23: -0.2584 REMARK 3 S31: -0.3275 S32: 0.0586 S33: -0.1356 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 224 THROUGH 238 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.8838 -8.0227 25.3978 REMARK 3 T TENSOR REMARK 3 T11: 0.3545 T22: 0.6440 REMARK 3 T33: 0.3499 T12: 0.0261 REMARK 3 T13: 0.1313 T23: 0.0186 REMARK 3 L TENSOR REMARK 3 L11: 4.6128 L22: 1.8342 REMARK 3 L33: 2.3248 L12: -1.2765 REMARK 3 L13: -1.9411 L23: 0.2835 REMARK 3 S TENSOR REMARK 3 S11: 0.1629 S12: 1.2074 S13: 0.4528 REMARK 3 S21: -0.4817 S22: 0.0462 S23: -0.4118 REMARK 3 S31: -0.1752 S32: 0.1884 S33: -0.2305 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 239 THROUGH 251 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.5497 -6.2532 44.1145 REMARK 3 T TENSOR REMARK 3 T11: 0.1850 T22: 0.2145 REMARK 3 T33: 0.2083 T12: 0.0112 REMARK 3 T13: 0.0019 T23: -0.0051 REMARK 3 L TENSOR REMARK 3 L11: 3.2445 L22: 1.6152 REMARK 3 L33: 3.0581 L12: 0.0621 REMARK 3 L13: -0.8908 L23: -0.4662 REMARK 3 S TENSOR REMARK 3 S11: 0.0504 S12: 0.4222 S13: 0.0608 REMARK 3 S21: -0.0741 S22: 0.0258 S23: 0.0200 REMARK 3 S31: -0.0902 S32: -0.1227 S33: -0.0843 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 252 THROUGH 273 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.8889 -11.9878 46.2842 REMARK 3 T TENSOR REMARK 3 T11: 0.1415 T22: 0.1728 REMARK 3 T33: 0.1632 T12: -0.0013 REMARK 3 T13: 0.0091 T23: 0.0147 REMARK 3 L TENSOR REMARK 3 L11: 3.0817 L22: 0.9271 REMARK 3 L33: 1.4802 L12: -0.5646 REMARK 3 L13: 0.6739 L23: -0.4734 REMARK 3 S TENSOR REMARK 3 S11: 0.0653 S12: 0.2250 S13: -0.1906 REMARK 3 S21: -0.0568 S22: 0.0397 S23: -0.1909 REMARK 3 S31: 0.1344 S32: 0.1318 S33: -0.1337 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 274 THROUGH 284 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.2012 -16.1954 37.3761 REMARK 3 T TENSOR REMARK 3 T11: 0.2171 T22: 0.2535 REMARK 3 T33: 0.2305 T12: -0.0080 REMARK 3 T13: -0.0421 T23: -0.0509 REMARK 3 L TENSOR REMARK 3 L11: 6.5422 L22: 5.2111 REMARK 3 L33: 3.8591 L12: 1.2216 REMARK 3 L13: -2.2105 L23: -0.9747 REMARK 3 S TENSOR REMARK 3 S11: 0.2278 S12: 0.1014 S13: -0.2937 REMARK 3 S21: -0.1763 S22: -0.0373 S23: 0.0727 REMARK 3 S31: 0.2132 S32: 0.0369 S33: -0.2280 REMARK 3 TLS GROUP : 28 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 285 THROUGH 301 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.8576 -12.2845 39.1404 REMARK 3 T TENSOR REMARK 3 T11: 0.1112 T22: 0.1973 REMARK 3 T33: 0.1223 T12: 0.0214 REMARK 3 T13: -0.0142 T23: -0.0278 REMARK 3 L TENSOR REMARK 3 L11: 2.8264 L22: 5.2667 REMARK 3 L33: 4.5315 L12: 1.1190 REMARK 3 L13: -1.3321 L23: -2.0439 REMARK 3 S TENSOR REMARK 3 S11: 0.1405 S12: 0.3950 S13: -0.0202 REMARK 3 S21: -0.2083 S22: 0.0216 S23: 0.1117 REMARK 3 S31: 0.0829 S32: 0.0438 S33: -0.1407 REMARK 3 TLS GROUP : 29 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 302 THROUGH 352 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.7153 -10.4529 40.2659 REMARK 3 T TENSOR REMARK 3 T11: 0.1665 T22: 0.2407 REMARK 3 T33: 0.1666 T12: 0.0264 REMARK 3 T13: 0.0087 T23: -0.0078 REMARK 3 L TENSOR REMARK 3 L11: 2.1485 L22: 1.7437 REMARK 3 L33: 1.4255 L12: -0.3948 REMARK 3 L13: -0.1577 L23: 0.3588 REMARK 3 S TENSOR REMARK 3 S11: 0.0742 S12: 0.4204 S13: -0.0374 REMARK 3 S21: -0.2202 S22: -0.0274 S23: -0.1704 REMARK 3 S31: 0.0750 S32: 0.1460 S33: -0.0438 REMARK 3 TLS GROUP : 30 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 353 THROUGH 366 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.5986 -11.2111 48.7952 REMARK 3 T TENSOR REMARK 3 T11: 0.1646 T22: 0.2608 REMARK 3 T33: 0.2808 T12: 0.0271 REMARK 3 T13: 0.0098 T23: 0.0158 REMARK 3 L TENSOR REMARK 3 L11: 4.6988 L22: 8.5388 REMARK 3 L33: 2.4143 L12: -3.7728 REMARK 3 L13: 0.5946 L23: -0.8437 REMARK 3 S TENSOR REMARK 3 S11: -0.0915 S12: -0.1058 S13: 0.1516 REMARK 3 S21: 0.2864 S22: -0.0841 S23: -1.0796 REMARK 3 S31: 0.1243 S32: 0.3452 S33: 0.1579 REMARK 3 TLS GROUP : 31 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 367 THROUGH 395 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.8562 -21.2340 43.3858 REMARK 3 T TENSOR REMARK 3 T11: 0.1931 T22: 0.2234 REMARK 3 T33: 0.2722 T12: 0.0695 REMARK 3 T13: -0.0124 T23: -0.0445 REMARK 3 L TENSOR REMARK 3 L11: 1.7388 L22: 1.9113 REMARK 3 L33: 5.7317 L12: -0.4538 REMARK 3 L13: 0.0246 L23: 0.6004 REMARK 3 S TENSOR REMARK 3 S11: 0.1317 S12: 0.3626 S13: -0.3440 REMARK 3 S21: -0.1481 S22: -0.0003 S23: -0.0746 REMARK 3 S31: 0.4960 S32: 0.1891 S33: -0.1082 REMARK 3 TLS GROUP : 32 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 396 THROUGH 417 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.8877 -4.8197 37.0267 REMARK 3 T TENSOR REMARK 3 T11: 0.2110 T22: 0.3754 REMARK 3 T33: 0.3107 T12: 0.0081 REMARK 3 T13: 0.0856 T23: 0.0224 REMARK 3 L TENSOR REMARK 3 L11: 1.9929 L22: 6.2243 REMARK 3 L33: 2.5876 L12: 0.3706 REMARK 3 L13: 0.6190 L23: 1.4663 REMARK 3 S TENSOR REMARK 3 S11: 0.0119 S12: 0.3679 S13: 0.2075 REMARK 3 S21: -0.3018 S22: 0.1290 S23: -0.8069 REMARK 3 S31: -0.1491 S32: 0.2880 S33: -0.1207 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4KNL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000079562. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00605 REMARK 200 MONOCHROMATOR : FIXED-EXIT LN2 COOLED DOUBLE REMARK 200 CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 122961 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 48.210 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4KNK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES/IMIDAZOLE, PH 6.5, 0.02 M REMARK 280 SODIUM FORMATE, 0.02 M AMMONIUM ACETATE, 0.02 M SODIUM CITRATE, REMARK 280 0.02 M RACEMIC SODIUM/POTASSIUM TARTRATE, 0.02 M SODIUM OXAMATE, REMARK 280 12.5% W/V PEG1000, 12.5% W/V PEG3350, 12.5% W/V MPD, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 41.41500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2440 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 REMARK 400 THE MURAMYL TETRAPEPTIDE IS PEPTIDE-LIKE, A MEMBER OF UNKNOWN CLASS. REMARK 400 REMARK 400 GROUP: 1 REMARK 400 NAME: MURAMYL TETRAPEPTIDE REMARK 400 CHAIN: F, G REMARK 400 COMPONENT_1: PEPTIDE LIKE POLYMER REMARK 400 DESCRIPTION: NULL REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 197 REMARK 465 SER A 198 REMARK 465 ALA A 199 REMARK 465 SER A 200 REMARK 465 ALA A 201 REMARK 465 GLN A 202 REMARK 465 PRO A 203 REMARK 465 ARG A 204 REMARK 465 SER A 205 REMARK 465 VAL A 206 REMARK 465 ALA A 207 REMARK 465 ALA A 208 REMARK 465 THR A 209 REMARK 465 PRO A 210 REMARK 465 LYS A 211 REMARK 465 THR A 212 REMARK 465 GLY A 418 REMARK 465 THR A 419 REMARK 465 GLN A 420 REMARK 465 SER A 421 REMARK 465 GLY B 197 REMARK 465 SER B 198 REMARK 465 ALA B 199 REMARK 465 SER B 200 REMARK 465 ALA B 201 REMARK 465 GLN B 202 REMARK 465 PRO B 203 REMARK 465 ARG B 204 REMARK 465 SER B 205 REMARK 465 VAL B 206 REMARK 465 ALA B 207 REMARK 465 ALA B 208 REMARK 465 THR B 209 REMARK 465 PRO B 210 REMARK 465 LYS B 211 REMARK 465 THR B 212 REMARK 465 GLY B 418 REMARK 465 THR B 419 REMARK 465 GLN B 420 REMARK 465 SER B 421 REMARK 465 GLY C 197 REMARK 465 SER C 198 REMARK 465 ALA C 199 REMARK 465 SER C 200 REMARK 465 ALA C 201 REMARK 465 GLN C 202 REMARK 465 PRO C 203 REMARK 465 ARG C 204 REMARK 465 SER C 205 REMARK 465 VAL C 206 REMARK 465 ALA C 207 REMARK 465 ALA C 208 REMARK 465 THR C 209 REMARK 465 PRO C 210 REMARK 465 LYS C 211 REMARK 465 THR C 212 REMARK 465 GLN C 420 REMARK 465 SER C 421 REMARK 465 GLY D 197 REMARK 465 SER D 198 REMARK 465 ALA D 199 REMARK 465 SER D 200 REMARK 465 ALA D 201 REMARK 465 GLN D 202 REMARK 465 PRO D 203 REMARK 465 ARG D 204 REMARK 465 SER D 205 REMARK 465 VAL D 206 REMARK 465 ALA D 207 REMARK 465 ALA D 208 REMARK 465 THR D 209 REMARK 465 PRO D 210 REMARK 465 LYS D 211 REMARK 465 THR D 212 REMARK 465 SER D 213 REMARK 465 GLY D 418 REMARK 465 THR D 419 REMARK 465 GLN D 420 REMARK 465 SER D 421 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 216 CG CD CE NZ REMARK 470 LYS A 231 CD CE NZ REMARK 470 LYS A 235 CD CE NZ REMARK 470 LYS A 238 CD CE NZ REMARK 470 ARG A 271 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 355 CE NZ REMARK 470 LYS A 413 CE NZ REMARK 470 LYS B 216 CD CE NZ REMARK 470 LYS B 231 CG CD CE NZ REMARK 470 LYS B 235 CD CE NZ REMARK 470 LYS B 238 CG CD CE NZ REMARK 470 ARG B 271 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 355 CE NZ REMARK 470 LYS B 413 CE NZ REMARK 470 LYS C 216 CD CE NZ REMARK 470 LYS C 231 CD CE NZ REMARK 470 LYS C 235 CD CE NZ REMARK 470 LYS C 238 CG CD CE NZ REMARK 470 ARG C 271 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 355 CD CE NZ REMARK 470 LYS D 216 CG CD CE NZ REMARK 470 LYS D 231 CG CD CE NZ REMARK 470 LYS D 235 CD CE NZ REMARK 470 LYS D 238 CD CE NZ REMARK 470 ARG D 271 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 355 CD CE NZ REMARK 470 LYS D 413 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 649 O HOH C 742 2.15 REMARK 500 O HOH B 627 O HOH B 702 2.17 REMARK 500 O HOH B 680 O HOH B 689 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 223 103.00 -161.88 REMARK 500 ASP A 295 -157.96 -133.44 REMARK 500 VAL A 312 22.43 -144.05 REMARK 500 ASP A 362 -4.25 -141.67 REMARK 500 ARG B 258 51.78 -118.88 REMARK 500 ALA B 288 142.75 -170.62 REMARK 500 ASP B 295 -157.86 -130.78 REMARK 500 VAL B 312 17.68 -145.28 REMARK 500 SER C 223 105.79 -165.11 REMARK 500 ASP C 295 -158.81 -128.87 REMARK 500 VAL C 312 16.97 -146.01 REMARK 500 ASP D 242 81.78 -150.84 REMARK 500 ASP D 295 -157.26 -129.45 REMARK 500 ASP D 362 -8.24 -140.30 REMARK 500 ZGL F 3 116.94 -120.32 REMARK 500 ZGL G 3 120.91 -117.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ZGL F 3 ALY F 4 140.39 REMARK 500 ZGL G 3 ALY G 4 139.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ZGL F 3 -14.24 REMARK 500 ZGL G 3 -12.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 504 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 305 OG1 REMARK 620 2 HOH A 620 O 90.3 REMARK 620 3 HOH A 626 O 84.8 95.8 REMARK 620 4 HOH A 645 O 104.1 165.6 86.4 REMARK 620 5 HOH A 649 O 101.5 98.8 164.1 77.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 502 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 357 OD1 REMARK 620 2 SER A 358 O 87.9 REMARK 620 3 ASP A 362 OD2 137.3 118.5 REMARK 620 4 ASP A 362 OD1 172.6 90.3 49.3 REMARK 620 5 ASN A 364 O 97.7 92.1 112.9 75.1 REMARK 620 6 HOH A 700 O 74.5 161.6 79.1 106.4 85.1 REMARK 620 7 HOH A 709 O 74.1 85.8 75.2 113.0 171.5 94.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 504 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 305 OG1 REMARK 620 2 HOH B 617 O 109.5 REMARK 620 3 HOH B 623 O 83.1 87.8 REMARK 620 4 HOH B 626 O 90.4 160.1 93.7 REMARK 620 5 HOH B 640 O 102.2 85.7 172.7 91.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 502 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 357 OD1 REMARK 620 2 SER B 358 O 90.9 REMARK 620 3 ASP B 362 OD2 134.9 123.3 REMARK 620 4 ASP B 362 OD1 171.9 89.6 50.1 REMARK 620 5 ASN B 364 O 94.6 92.1 110.8 77.3 REMARK 620 6 HOH B 690 O 74.5 82.6 81.2 113.6 167.8 REMARK 620 7 HOH B 694 O 74.0 162.0 74.8 104.0 79.7 102.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C 505 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR C 305 OG1 REMARK 620 2 HOH C 612 O 99.9 REMARK 620 3 HOH C 614 O 86.6 94.2 REMARK 620 4 HOH C 616 O 97.2 94.9 169.4 REMARK 620 5 HOH C 619 O 108.2 151.9 86.7 82.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C 502 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 357 OD1 REMARK 620 2 SER C 358 O 89.7 REMARK 620 3 ASP C 362 OD2 137.1 118.8 REMARK 620 4 ASP C 362 OD1 172.4 88.5 49.5 REMARK 620 5 ASN C 364 O 95.7 96.7 110.5 77.2 REMARK 620 6 HOH C 680 O 74.8 164.3 75.7 106.5 82.5 REMARK 620 7 HOH C 716 O 80.7 82.8 72.7 106.3 176.4 97.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA D 503 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR D 305 OG1 REMARK 620 2 HOH D 615 O 97.4 REMARK 620 3 HOH D 616 O 98.3 94.3 REMARK 620 4 HOH D 619 O 85.4 95.6 169.0 REMARK 620 5 HOH D 627 O 110.9 151.6 83.1 85.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA D 502 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 357 OD1 REMARK 620 2 SER D 358 O 86.3 REMARK 620 3 ASP D 362 OD2 138.4 120.4 REMARK 620 4 ASP D 362 OD1 170.6 86.7 50.9 REMARK 620 5 ASN D 364 O 99.4 92.8 109.5 74.7 REMARK 620 6 HOH D 661 O 73.4 83.4 78.5 112.0 172.0 REMARK 620 7 HOH D 707 O 76.3 162.6 74.3 110.6 90.3 91.3 REMARK 620 N 1 2 3 4 5 6 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4KNK RELATED DB: PDB REMARK 900 STRUCTURE OF AMIA WITHOUT LIGAND REMARK 900 RELATED ID: 3LAT RELATED DB: PDB REMARK 900 STRUCTURE OF HOMOLOGOUS PROTEIN AMIE FROM S. EPIDERMIDIS WITHOUT REMARK 900 LIGAND DBREF 4KNL A 198 421 UNP Q2FZK7 ATL_STAA8 198 421 DBREF 4KNL B 198 421 UNP Q2FZK7 ATL_STAA8 198 421 DBREF 4KNL C 198 421 UNP Q2FZK7 ATL_STAA8 198 421 DBREF 4KNL D 198 421 UNP Q2FZK7 ATL_STAA8 198 421 DBREF 4KNL F 2 6 PDB 4KNL 4KNL 2 6 DBREF 4KNL G 2 6 PDB 4KNL 4KNL 2 6 SEQADV 4KNL GLY A 197 UNP Q2FZK7 EXPRESSION TAG SEQADV 4KNL GLY B 197 UNP Q2FZK7 EXPRESSION TAG SEQADV 4KNL GLY C 197 UNP Q2FZK7 EXPRESSION TAG SEQADV 4KNL GLY D 197 UNP Q2FZK7 EXPRESSION TAG SEQRES 1 A 225 GLY SER ALA SER ALA GLN PRO ARG SER VAL ALA ALA THR SEQRES 2 A 225 PRO LYS THR SER LEU PRO LYS TYR LYS PRO GLN VAL ASN SEQRES 3 A 225 SER SER ILE ASN ASP TYR ILE CYS LYS ASN ASN LEU LYS SEQRES 4 A 225 ALA PRO LYS ILE GLU GLU ASP TYR THR SER TYR PHE PRO SEQRES 5 A 225 LYS TYR ALA TYR ARG ASN GLY VAL GLY ARG PRO GLU GLY SEQRES 6 A 225 ILE VAL VAL HIS ASP THR ALA ASN ASP ARG SER THR ILE SEQRES 7 A 225 ASN GLY GLU ILE SER TYR MET LYS ASN ASN TYR GLN ASN SEQRES 8 A 225 ALA PHE VAL HIS ALA PHE VAL ASP GLY ASP ARG ILE ILE SEQRES 9 A 225 GLU THR ALA PRO THR ASP TYR LEU SER TRP GLY VAL GLY SEQRES 10 A 225 ALA VAL GLY ASN PRO ARG PHE ILE ASN VAL GLU ILE VAL SEQRES 11 A 225 HIS THR HIS ASP TYR ALA SER PHE ALA ARG SER MET ASN SEQRES 12 A 225 ASN TYR ALA ASP TYR ALA ALA THR GLN LEU GLN TYR TYR SEQRES 13 A 225 GLY LEU LYS PRO ASP SER ALA GLU TYR ASP GLY ASN GLY SEQRES 14 A 225 THR VAL TRP THR HIS TYR ALA VAL SER LYS TYR LEU GLY SEQRES 15 A 225 GLY THR ASP HIS ALA ASP PRO HIS GLY TYR LEU ARG SER SEQRES 16 A 225 HIS ASN TYR SER TYR ASP GLN LEU TYR ASP LEU ILE ASN SEQRES 17 A 225 GLU LYS TYR LEU ILE LYS MET GLY LYS VAL ALA PRO TRP SEQRES 18 A 225 GLY THR GLN SER SEQRES 1 B 225 GLY SER ALA SER ALA GLN PRO ARG SER VAL ALA ALA THR SEQRES 2 B 225 PRO LYS THR SER LEU PRO LYS TYR LYS PRO GLN VAL ASN SEQRES 3 B 225 SER SER ILE ASN ASP TYR ILE CYS LYS ASN ASN LEU LYS SEQRES 4 B 225 ALA PRO LYS ILE GLU GLU ASP TYR THR SER TYR PHE PRO SEQRES 5 B 225 LYS TYR ALA TYR ARG ASN GLY VAL GLY ARG PRO GLU GLY SEQRES 6 B 225 ILE VAL VAL HIS ASP THR ALA ASN ASP ARG SER THR ILE SEQRES 7 B 225 ASN GLY GLU ILE SER TYR MET LYS ASN ASN TYR GLN ASN SEQRES 8 B 225 ALA PHE VAL HIS ALA PHE VAL ASP GLY ASP ARG ILE ILE SEQRES 9 B 225 GLU THR ALA PRO THR ASP TYR LEU SER TRP GLY VAL GLY SEQRES 10 B 225 ALA VAL GLY ASN PRO ARG PHE ILE ASN VAL GLU ILE VAL SEQRES 11 B 225 HIS THR HIS ASP TYR ALA SER PHE ALA ARG SER MET ASN SEQRES 12 B 225 ASN TYR ALA ASP TYR ALA ALA THR GLN LEU GLN TYR TYR SEQRES 13 B 225 GLY LEU LYS PRO ASP SER ALA GLU TYR ASP GLY ASN GLY SEQRES 14 B 225 THR VAL TRP THR HIS TYR ALA VAL SER LYS TYR LEU GLY SEQRES 15 B 225 GLY THR ASP HIS ALA ASP PRO HIS GLY TYR LEU ARG SER SEQRES 16 B 225 HIS ASN TYR SER TYR ASP GLN LEU TYR ASP LEU ILE ASN SEQRES 17 B 225 GLU LYS TYR LEU ILE LYS MET GLY LYS VAL ALA PRO TRP SEQRES 18 B 225 GLY THR GLN SER SEQRES 1 C 225 GLY SER ALA SER ALA GLN PRO ARG SER VAL ALA ALA THR SEQRES 2 C 225 PRO LYS THR SER LEU PRO LYS TYR LYS PRO GLN VAL ASN SEQRES 3 C 225 SER SER ILE ASN ASP TYR ILE CYS LYS ASN ASN LEU LYS SEQRES 4 C 225 ALA PRO LYS ILE GLU GLU ASP TYR THR SER TYR PHE PRO SEQRES 5 C 225 LYS TYR ALA TYR ARG ASN GLY VAL GLY ARG PRO GLU GLY SEQRES 6 C 225 ILE VAL VAL HIS ASP THR ALA ASN ASP ARG SER THR ILE SEQRES 7 C 225 ASN GLY GLU ILE SER TYR MET LYS ASN ASN TYR GLN ASN SEQRES 8 C 225 ALA PHE VAL HIS ALA PHE VAL ASP GLY ASP ARG ILE ILE SEQRES 9 C 225 GLU THR ALA PRO THR ASP TYR LEU SER TRP GLY VAL GLY SEQRES 10 C 225 ALA VAL GLY ASN PRO ARG PHE ILE ASN VAL GLU ILE VAL SEQRES 11 C 225 HIS THR HIS ASP TYR ALA SER PHE ALA ARG SER MET ASN SEQRES 12 C 225 ASN TYR ALA ASP TYR ALA ALA THR GLN LEU GLN TYR TYR SEQRES 13 C 225 GLY LEU LYS PRO ASP SER ALA GLU TYR ASP GLY ASN GLY SEQRES 14 C 225 THR VAL TRP THR HIS TYR ALA VAL SER LYS TYR LEU GLY SEQRES 15 C 225 GLY THR ASP HIS ALA ASP PRO HIS GLY TYR LEU ARG SER SEQRES 16 C 225 HIS ASN TYR SER TYR ASP GLN LEU TYR ASP LEU ILE ASN SEQRES 17 C 225 GLU LYS TYR LEU ILE LYS MET GLY LYS VAL ALA PRO TRP SEQRES 18 C 225 GLY THR GLN SER SEQRES 1 D 225 GLY SER ALA SER ALA GLN PRO ARG SER VAL ALA ALA THR SEQRES 2 D 225 PRO LYS THR SER LEU PRO LYS TYR LYS PRO GLN VAL ASN SEQRES 3 D 225 SER SER ILE ASN ASP TYR ILE CYS LYS ASN ASN LEU LYS SEQRES 4 D 225 ALA PRO LYS ILE GLU GLU ASP TYR THR SER TYR PHE PRO SEQRES 5 D 225 LYS TYR ALA TYR ARG ASN GLY VAL GLY ARG PRO GLU GLY SEQRES 6 D 225 ILE VAL VAL HIS ASP THR ALA ASN ASP ARG SER THR ILE SEQRES 7 D 225 ASN GLY GLU ILE SER TYR MET LYS ASN ASN TYR GLN ASN SEQRES 8 D 225 ALA PHE VAL HIS ALA PHE VAL ASP GLY ASP ARG ILE ILE SEQRES 9 D 225 GLU THR ALA PRO THR ASP TYR LEU SER TRP GLY VAL GLY SEQRES 10 D 225 ALA VAL GLY ASN PRO ARG PHE ILE ASN VAL GLU ILE VAL SEQRES 11 D 225 HIS THR HIS ASP TYR ALA SER PHE ALA ARG SER MET ASN SEQRES 12 D 225 ASN TYR ALA ASP TYR ALA ALA THR GLN LEU GLN TYR TYR SEQRES 13 D 225 GLY LEU LYS PRO ASP SER ALA GLU TYR ASP GLY ASN GLY SEQRES 14 D 225 THR VAL TRP THR HIS TYR ALA VAL SER LYS TYR LEU GLY SEQRES 15 D 225 GLY THR ASP HIS ALA ASP PRO HIS GLY TYR LEU ARG SER SEQRES 16 D 225 HIS ASN TYR SER TYR ASP GLN LEU TYR ASP LEU ILE ASN SEQRES 17 D 225 GLU LYS TYR LEU ILE LYS MET GLY LYS VAL ALA PRO TRP SEQRES 18 D 225 GLY THR GLN SER SEQRES 1 F 5 ALA ZGL ALY DAL NH2 SEQRES 1 G 5 ALA ZGL ALY DAL NH2 MODRES 4KNL ALY F 4 LYS N(6)-ACETYLLYSINE MODRES 4KNL ALY G 4 LYS N(6)-ACETYLLYSINE HET ZGL F 3 9 HET ALY F 4 12 HET DAL F 5 5 HET NH2 F 6 1 HET ZGL G 3 9 HET ALY G 4 12 HET DAL G 5 5 HET NH2 G 6 1 HET IMD A 501 5 HET NA A 502 1 HET FMT A 503 3 HET NA A 504 1 HET IMD B 501 5 HET NA B 502 1 HET FMT B 503 3 HET NA B 504 1 HET OXM B 505 6 HET IMD C 501 5 HET NA C 502 1 HET MPD C 503 8 HET TAR C 504 10 HET NA C 505 1 HET IMD D 501 5 HET NA D 502 1 HET NA D 503 1 HET MUB F 1 19 HET MUB G 1 19 HETNAM ZGL D-ALPHA-GLUTAMINE HETNAM ALY N(6)-ACETYLLYSINE HETNAM DAL D-ALANINE HETNAM NH2 AMINO GROUP HETNAM IMD IMIDAZOLE HETNAM NA SODIUM ION HETNAM FMT FORMIC ACID HETNAM OXM OXAMIC ACID HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM TAR D(-)-TARTARIC ACID HETNAM MUB N-ACETYL-ALPHA-MURAMIC ACID HETSYN ZGL ISO-D-GLUTAMINE HETSYN MUB N-ACETYL-MURAMIC ACID; N-ACETYLMURAMIC ACID FORMUL 5 ZGL 2(C5 H10 N2 O3) FORMUL 5 ALY 2(C8 H16 N2 O3) FORMUL 5 DAL 2(C3 H7 N O2) FORMUL 5 NH2 2(H2 N) FORMUL 7 IMD 4(C3 H5 N2 1+) FORMUL 8 NA 8(NA 1+) FORMUL 9 FMT 2(C H2 O2) FORMUL 15 OXM C2 H3 N O3 FORMUL 18 MPD C6 H14 O2 FORMUL 19 TAR C4 H6 O6 FORMUL 24 MUB 2(C11 H19 N O8) FORMUL 26 HOH *630(H2 O) HELIX 1 1 SER A 223 ASN A 232 1 10 HELIX 2 2 THR A 273 ASN A 284 1 12 HELIX 3 3 VAL A 312 ASN A 317 1 6 HELIX 4 4 ASP A 330 GLY A 353 1 24 HELIX 5 5 HIS A 370 LEU A 377 1 8 HELIX 6 6 PRO A 385 HIS A 392 1 8 HELIX 7 7 SER A 395 MET A 411 1 17 HELIX 8 8 SER B 223 ASN B 232 1 10 HELIX 9 9 THR B 273 ASN B 284 1 12 HELIX 10 10 VAL B 312 ASN B 317 1 6 HELIX 11 11 ASP B 330 TYR B 352 1 23 HELIX 12 12 HIS B 370 LEU B 377 1 8 HELIX 13 13 PRO B 385 HIS B 392 1 8 HELIX 14 14 SER B 395 MET B 411 1 17 HELIX 15 15 SER C 223 ASN C 232 1 10 HELIX 16 16 THR C 273 ASN C 284 1 12 HELIX 17 17 VAL C 312 ASN C 317 1 6 HELIX 18 18 ASP C 330 GLY C 353 1 24 HELIX 19 19 HIS C 370 LEU C 377 1 8 HELIX 20 20 PRO C 385 HIS C 392 1 8 HELIX 21 21 SER C 395 MET C 411 1 17 HELIX 22 22 SER D 223 ASN D 232 1 10 HELIX 23 23 THR D 273 ASN D 284 1 12 HELIX 24 24 VAL D 312 ASN D 317 1 6 HELIX 25 25 ASP D 330 GLY D 353 1 24 HELIX 26 26 HIS D 370 LEU D 377 1 8 HELIX 27 27 PRO D 385 HIS D 392 1 8 HELIX 28 28 SER D 395 MET D 411 1 17 SHEET 1 A12 VAL A 367 THR A 369 0 SHEET 2 A12 GLY A 261 ASP A 266 1 N ILE A 262 O TRP A 368 SHEET 3 A12 PHE A 320 ILE A 325 1 O ILE A 321 N VAL A 263 SHEET 4 A12 ALA A 292 VAL A 294 1 N ALA A 292 O GLU A 324 SHEET 5 A12 ILE A 299 GLU A 301 -1 O ILE A 300 N PHE A 293 SHEET 6 A12 ILE A 239 GLU A 241 1 N GLU A 240 O GLU A 301 SHEET 7 A12 ILE C 239 GLU C 241 -1 O ILE C 239 N GLU A 241 SHEET 8 A12 ILE C 299 GLU C 301 1 O GLU C 301 N GLU C 240 SHEET 9 A12 ALA C 292 VAL C 294 -1 N PHE C 293 O ILE C 300 SHEET 10 A12 PHE C 320 ILE C 325 1 O GLU C 324 N ALA C 292 SHEET 11 A12 GLY C 261 ASP C 266 1 N VAL C 263 O ILE C 321 SHEET 12 A12 VAL C 367 THR C 369 1 O TRP C 368 N ILE C 262 SHEET 1 B12 VAL B 367 THR B 369 0 SHEET 2 B12 GLY B 261 ASP B 266 1 N ILE B 262 O TRP B 368 SHEET 3 B12 PHE B 320 ILE B 325 1 O ILE B 321 N VAL B 263 SHEET 4 B12 ALA B 292 VAL B 294 1 N ALA B 292 O GLU B 324 SHEET 5 B12 ILE B 299 GLU B 301 -1 O ILE B 300 N PHE B 293 SHEET 6 B12 ILE B 239 GLU B 241 1 N GLU B 240 O GLU B 301 SHEET 7 B12 ILE D 239 GLU D 241 -1 O ILE D 239 N GLU B 241 SHEET 8 B12 ILE D 299 GLU D 301 1 O GLU D 301 N GLU D 240 SHEET 9 B12 ALA D 292 VAL D 294 -1 N PHE D 293 O ILE D 300 SHEET 10 B12 PHE D 320 ILE D 325 1 O GLU D 324 N ALA D 292 SHEET 11 B12 GLY D 261 ASP D 266 1 N VAL D 263 O ILE D 321 SHEET 12 B12 VAL D 367 THR D 369 1 O TRP D 368 N VAL D 264 LINK C10 MUB F 1 N ALA F 2 1555 1555 1.34 LINK C ALA F 2 N ZGL F 3 1555 1555 1.34 LINK C ZGL F 3 N ALY F 4 1555 1555 1.35 LINK C ALY F 4 N DAL F 5 1555 1555 1.33 LINK C DAL F 5 N NH2 F 6 1555 1555 1.34 LINK C10 MUB G 1 N ALA G 2 1555 1555 1.34 LINK C ALA G 2 N ZGL G 3 1555 1555 1.33 LINK C ZGL G 3 N ALY G 4 1555 1555 1.33 LINK C ALY G 4 N DAL G 5 1555 1555 1.33 LINK C DAL G 5 N NH2 G 6 1555 1555 1.33 LINK OG1 THR A 305 NA NA A 504 1555 1555 2.38 LINK OD1 ASP A 357 NA NA A 502 1555 1555 2.60 LINK O SER A 358 NA NA A 502 1555 1555 2.29 LINK OD2 ASP A 362 NA NA A 502 1555 1555 2.56 LINK OD1 ASP A 362 NA NA A 502 1555 1555 2.67 LINK O ASN A 364 NA NA A 502 1555 1555 2.30 LINK NA NA A 502 O HOH A 700 1555 1555 2.76 LINK NA NA A 502 O HOH A 709 1555 1555 2.50 LINK NA NA A 504 O HOH A 620 1555 1555 2.39 LINK NA NA A 504 O HOH A 626 1555 1555 2.26 LINK NA NA A 504 O HOH A 645 1555 1555 2.34 LINK NA NA A 504 O HOH A 649 1555 1555 2.25 LINK OG1 THR B 305 NA NA B 504 1555 1555 2.41 LINK OD1 ASP B 357 NA NA B 502 1555 1555 2.57 LINK O SER B 358 NA NA B 502 1555 1555 2.30 LINK OD2 ASP B 362 NA NA B 502 1555 1555 2.56 LINK OD1 ASP B 362 NA NA B 502 1555 1555 2.60 LINK O ASN B 364 NA NA B 502 1555 1555 2.32 LINK NA NA B 502 O HOH B 690 1555 1555 2.59 LINK NA NA B 502 O HOH B 694 1555 1555 2.75 LINK NA NA B 504 O HOH B 617 1555 1555 2.32 LINK NA NA B 504 O HOH B 623 1555 1555 2.35 LINK NA NA B 504 O HOH B 626 1555 1555 2.66 LINK NA NA B 504 O HOH B 640 1555 1555 2.26 LINK OG1 THR C 305 NA NA C 505 1555 1555 2.25 LINK OD1 ASP C 357 NA NA C 502 1555 1555 2.52 LINK O SER C 358 NA NA C 502 1555 1555 2.36 LINK OD2 ASP C 362 NA NA C 502 1555 1555 2.55 LINK OD1 ASP C 362 NA NA C 502 1555 1555 2.63 LINK O ASN C 364 NA NA C 502 1555 1555 2.37 LINK NA NA C 502 O HOH C 680 1555 1555 2.70 LINK NA NA C 502 O HOH C 716 1555 1555 2.41 LINK NA NA C 505 O HOH C 612 1555 1555 2.41 LINK NA NA C 505 O HOH C 614 1555 1555 2.33 LINK NA NA C 505 O HOH C 616 1555 1555 2.30 LINK NA NA C 505 O HOH C 619 1555 1555 2.23 LINK OG1 THR D 305 NA NA D 503 1555 1555 2.27 LINK OD1 ASP D 357 NA NA D 502 1555 1555 2.69 LINK O SER D 358 NA NA D 502 1555 1555 2.43 LINK OD2 ASP D 362 NA NA D 502 1555 1555 2.37 LINK OD1 ASP D 362 NA NA D 502 1555 1555 2.67 LINK O ASN D 364 NA NA D 502 1555 1555 2.31 LINK NA NA D 502 O HOH D 661 1555 1555 2.51 LINK NA NA D 502 O HOH D 707 1555 1555 2.53 LINK NA NA D 503 O HOH D 615 1555 1555 2.49 LINK NA NA D 503 O HOH D 616 1555 1555 2.34 LINK NA NA D 503 O HOH D 619 1555 1555 2.35 LINK NA NA D 503 O HOH D 627 1555 1555 2.43 CISPEP 1 ASP A 384 PRO A 385 0 7.02 CISPEP 2 ASP B 384 PRO B 385 0 2.50 CISPEP 3 ASP C 384 PRO C 385 0 1.12 CISPEP 4 ASP D 384 PRO D 385 0 5.22 CRYST1 67.810 82.830 77.430 90.00 96.18 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014747 0.000000 0.001597 0.00000 SCALE2 0.000000 0.012073 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012990 0.00000