HEADER LYASE 10-MAY-13 4KNP TITLE CRYSTAL STRUCTURE OF A PUTATIVE ENOYL-COA HYDRATASE (PSI-NYSGRC- TITLE 2 019597) FROM MYCOBACTERIUM AVIUM PARATUBERCULOSIS K-10 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENOYL-COA HYDRATASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM AVIUM SUBSP. PARATUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 262316; SOURCE 4 STRAIN: K-10; SOURCE 5 GENE: ECHA7, MAP_0909C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PSGC KEYWDS ENOYL-COA, HYDRATASE, PROTEIN STRUCTURE INITIATIVE, NYSGRC, KEYWDS 2 STRUCTURAL GENOMICS, PSI-BIOLOGY, NEW YORK STRUCTURAL GENOMICS KEYWDS 3 RESEARCH CONSORTIUM, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR P.R.KUMAR,M.AHMED,J.ATTONITO,R.BHOSLE,S.CHAMALA,S.CHOWDHURY, AUTHOR 2 A.S.GLENN,J.HAMMONDS,B.HILLERICH,J.D.LOVE,R.SEIDEL,M.STEAD,R.TORO, AUTHOR 3 S.R.WASSERMAN,S.C.ALMO,NEW YORK STRUCTURAL GENOMICS RESEARCH AUTHOR 4 CONSORTIUM (NYSGRC) REVDAT 5 20-NOV-24 4KNP 1 REMARK REVDAT 4 06-DEC-23 4KNP 1 REMARK REVDAT 3 20-SEP-23 4KNP 1 SEQADV LINK REVDAT 2 15-NOV-17 4KNP 1 REMARK REVDAT 1 22-MAY-13 4KNP 0 JRNL AUTH P.R.KUMAR,B.HILLERICH,J.LOVE,R.SEIDEL,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE ENOYL-COA HYDRATASE FROM JRNL TITL 2 MYCOBACTERIUM AVIUM PARATUBERCULOSIS K-10 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.46 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 17650 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.135 REMARK 3 R VALUE (WORKING SET) : 0.133 REMARK 3 FREE R VALUE : 0.165 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 896 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 18.5433 - 3.4434 0.95 2807 127 0.1065 0.1411 REMARK 3 2 3.4434 - 2.7359 0.95 2784 151 0.1235 0.1518 REMARK 3 3 2.7359 - 2.3909 0.95 2785 150 0.1435 0.1736 REMARK 3 4 2.3909 - 2.1727 0.95 2811 145 0.1600 0.1823 REMARK 3 5 2.1727 - 2.0171 0.95 2777 150 0.1880 0.2058 REMARK 3 6 2.0171 - 1.8983 0.94 2772 173 0.2244 0.2462 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.3600 REMARK 3 OPERATOR: H,-H-K,-L REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1899 REMARK 3 ANGLE : 1.083 2578 REMARK 3 CHIRALITY : 0.071 301 REMARK 3 PLANARITY : 0.005 344 REMARK 3 DIHEDRAL : 13.579 694 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 16 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.2152 45.8411 30.2408 REMARK 3 T TENSOR REMARK 3 T11: 0.2690 T22: 0.2312 REMARK 3 T33: 0.2466 T12: 0.1362 REMARK 3 T13: 0.0293 T23: 0.0183 REMARK 3 L TENSOR REMARK 3 L11: 6.8591 L22: 8.9896 REMARK 3 L33: 2.7770 L12: 5.2598 REMARK 3 L13: 1.3068 L23: 0.7683 REMARK 3 S TENSOR REMARK 3 S11: -0.0178 S12: 0.0550 S13: 0.3174 REMARK 3 S21: 0.0124 S22: 0.0326 S23: 0.4887 REMARK 3 S31: -0.4245 S32: -0.2959 S33: -0.0103 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 61 THROUGH 94 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.1279 43.8685 28.9815 REMARK 3 T TENSOR REMARK 3 T11: 0.2697 T22: 0.2603 REMARK 3 T33: 0.2597 T12: 0.0654 REMARK 3 T13: 0.0480 T23: -0.0034 REMARK 3 L TENSOR REMARK 3 L11: 1.4767 L22: 0.5442 REMARK 3 L33: 2.0047 L12: -0.6546 REMARK 3 L13: 1.1227 L23: -0.0307 REMARK 3 S TENSOR REMARK 3 S11: -0.0128 S12: -0.1153 S13: 0.4552 REMARK 3 S21: -0.0826 S22: -0.0755 S23: 0.2155 REMARK 3 S31: -0.1312 S32: -0.0368 S33: 0.1158 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 95 THROUGH 182 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.5267 40.1884 31.3275 REMARK 3 T TENSOR REMARK 3 T11: 0.2091 T22: 0.1487 REMARK 3 T33: 0.2231 T12: 0.0303 REMARK 3 T13: 0.0414 T23: 0.0202 REMARK 3 L TENSOR REMARK 3 L11: 2.6664 L22: 0.4563 REMARK 3 L33: 0.9654 L12: 0.0881 REMARK 3 L13: 0.0638 L23: -0.0474 REMARK 3 S TENSOR REMARK 3 S11: 0.0897 S12: -0.0218 S13: 0.2891 REMARK 3 S21: -0.0676 S22: -0.0155 S23: 0.0136 REMARK 3 S31: -0.2025 S32: -0.0143 S33: -0.0629 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 183 THROUGH 262 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.8325 36.3515 31.1387 REMARK 3 T TENSOR REMARK 3 T11: 0.1925 T22: 0.1310 REMARK 3 T33: 0.2372 T12: 0.0673 REMARK 3 T13: 0.0180 T23: 0.0096 REMARK 3 L TENSOR REMARK 3 L11: 2.6825 L22: 1.6225 REMARK 3 L33: 1.4112 L12: 0.9978 REMARK 3 L13: 0.2374 L23: 0.1681 REMARK 3 S TENSOR REMARK 3 S11: 0.0505 S12: 0.0026 S13: 0.1209 REMARK 3 S21: -0.0746 S22: 0.0125 S23: -0.0043 REMARK 3 S31: -0.0747 S32: 0.0100 S33: -0.0554 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4KNP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000079566. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-MAR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97931 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17650 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 27.9300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 0.91300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MR-SAD REMARK 200 SOFTWARE USED: PHENIX 1.8.2_1309 REMARK 200 STARTING MODEL: 3OC7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN (20 MM HEPES, PH 7.5, 150 MM REMARK 280 NACL, 10% GLYCEROL, 5MM DTT; RESERVOIR (0.2M CALCIUM ACETATE, 40% REMARK 280 PEG 300, 0.1M SODIUM CACODYLATE, PH(6.5) - MCSG1 #46); REMARK 280 CRYOPROTECTION (XYLITOL), VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K, PH 8.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.48550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 23.37431 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 30.45467 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 40.48550 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 23.37431 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 30.45467 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 40.48550 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 23.37431 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 30.45467 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 46.74863 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 60.90933 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 46.74863 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 60.90933 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 46.74863 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 60.90933 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 80.97100 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 40.48550 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 70.12294 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 SER A -2 REMARK 465 SER A -1 REMARK 465 GLY A 0 REMARK 465 VAL A 1 REMARK 465 ASP A 2 REMARK 465 LEU A 3 REMARK 465 GLY A 4 REMARK 465 THR A 5 REMARK 465 GLU A 6 REMARK 465 ASN A 7 REMARK 465 LEU A 8 REMARK 465 TYR A 9 REMARK 465 PHE A 10 REMARK 465 GLN A 11 REMARK 465 SER A 12 REMARK 465 MSE A 13 REMARK 465 ASP A 14 REMARK 465 SER A 83 REMARK 465 GLU A 84 REMARK 465 ALA A 85 REMARK 465 GLY A 86 REMARK 465 SER A 87 REMARK 465 GLY A 88 REMARK 465 GLY A 89 REMARK 465 SER A 90 REMARK 465 PRO A 91 REMARK 465 SER A 92 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 326 O HOH A 359 8654 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 28 47.89 -77.84 REMARK 500 ALA A 129 -129.59 50.82 REMARK 500 VAL A 158 -165.15 -122.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGRC-019597 RELATED DB: TARGETTRACK DBREF 4KNP A 13 275 UNP Q742C8 Q742C8_MYCPA 1 263 SEQADV 4KNP MSE A -9 UNP Q742C8 EXPRESSION TAG SEQADV 4KNP HIS A -8 UNP Q742C8 EXPRESSION TAG SEQADV 4KNP HIS A -7 UNP Q742C8 EXPRESSION TAG SEQADV 4KNP HIS A -6 UNP Q742C8 EXPRESSION TAG SEQADV 4KNP HIS A -5 UNP Q742C8 EXPRESSION TAG SEQADV 4KNP HIS A -4 UNP Q742C8 EXPRESSION TAG SEQADV 4KNP HIS A -3 UNP Q742C8 EXPRESSION TAG SEQADV 4KNP SER A -2 UNP Q742C8 EXPRESSION TAG SEQADV 4KNP SER A -1 UNP Q742C8 EXPRESSION TAG SEQADV 4KNP GLY A 0 UNP Q742C8 EXPRESSION TAG SEQADV 4KNP VAL A 1 UNP Q742C8 EXPRESSION TAG SEQADV 4KNP ASP A 2 UNP Q742C8 EXPRESSION TAG SEQADV 4KNP LEU A 3 UNP Q742C8 EXPRESSION TAG SEQADV 4KNP GLY A 4 UNP Q742C8 EXPRESSION TAG SEQADV 4KNP THR A 5 UNP Q742C8 EXPRESSION TAG SEQADV 4KNP GLU A 6 UNP Q742C8 EXPRESSION TAG SEQADV 4KNP ASN A 7 UNP Q742C8 EXPRESSION TAG SEQADV 4KNP LEU A 8 UNP Q742C8 EXPRESSION TAG SEQADV 4KNP TYR A 9 UNP Q742C8 EXPRESSION TAG SEQADV 4KNP PHE A 10 UNP Q742C8 EXPRESSION TAG SEQADV 4KNP GLN A 11 UNP Q742C8 EXPRESSION TAG SEQADV 4KNP SER A 12 UNP Q742C8 EXPRESSION TAG SEQRES 1 A 285 MSE HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 285 GLY THR GLU ASN LEU TYR PHE GLN SER MSE ASP ALA LEU SEQRES 3 A 285 VAL ASP TYR ALA GLY PRO ALA ALA THR GLY GLY PRO VAL SEQRES 4 A 285 ALA ARG LEU THR LEU ASN SER PRO HIS ASN ARG ASN ALA SEQRES 5 A 285 LEU SER SER ALA LEU VAL SER GLN LEU HIS GLN GLY LEU SEQRES 6 A 285 ARG ASP ALA SER SER ASP PRO ALA VAL ARG VAL VAL VAL SEQRES 7 A 285 LEU ALA HIS THR GLY GLY THR PHE CYS ALA GLY ALA ASP SEQRES 8 A 285 LEU SER GLU ALA GLY SER GLY GLY SER PRO SER SER ALA SEQRES 9 A 285 TYR ASP MSE ALA VAL GLU ARG ALA ARG GLU MSE ALA ALA SEQRES 10 A 285 LEU MSE ARG ALA ILE VAL GLU SER ARG LEU PRO VAL ILE SEQRES 11 A 285 ALA ALA ILE ASP GLY HIS VAL ARG ALA GLY GLY PHE GLY SEQRES 12 A 285 LEU VAL GLY ALA CYS ASP ILE ALA VAL ALA GLY PRO ARG SEQRES 13 A 285 SER SER PHE ALA LEU THR GLU ALA ARG ILE GLY VAL ALA SEQRES 14 A 285 PRO ALA ILE ILE SER LEU THR LEU LEU PRO LYS LEU SER SEQRES 15 A 285 ALA ARG ALA ALA ALA ARG TYR TYR LEU THR GLY GLU LYS SEQRES 16 A 285 PHE ASP ALA ARG ARG ALA GLU GLU ILE GLY LEU ILE THR SEQRES 17 A 285 MSE ALA ALA GLU ASP VAL ASP ALA ALA VAL ASP GLN LEU SEQRES 18 A 285 VAL ALA ASP VAL GLY ARG GLY SER PRO GLN GLY LEU ALA SEQRES 19 A 285 ALA SER LYS ALA LEU THR THR ALA ALA VAL LEU GLU ARG SEQRES 20 A 285 PHE ASP ARG ASP ALA GLU ARG LEU ALA GLU GLU SER ALA SEQRES 21 A 285 ARG LEU PHE VAL SER ASP GLU ALA ARG GLU GLY MSE LEU SEQRES 22 A 285 ALA PHE LEU GLU LYS ARG SER PRO ASN TRP THR SER MODRES 4KNP MSE A 97 MET SELENOMETHIONINE MODRES 4KNP MSE A 105 MET SELENOMETHIONINE MODRES 4KNP MSE A 109 MET SELENOMETHIONINE MODRES 4KNP MSE A 199 MET SELENOMETHIONINE MODRES 4KNP MSE A 262 MET SELENOMETHIONINE HET MSE A 97 8 HET MSE A 105 8 HET MSE A 109 8 HET MSE A 199 8 HET MSE A 262 16 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 2 HOH *74(H2 O) HELIX 1 1 GLY A 21 GLY A 26 1 6 HELIX 2 2 SER A 36 ARG A 40 5 5 HELIX 3 3 SER A 44 ASP A 61 1 18 HELIX 4 4 ALA A 94 SER A 115 1 22 HELIX 5 5 ALA A 129 CYS A 138 1 10 HELIX 6 6 THR A 152 GLY A 157 5 6 HELIX 7 7 ILE A 163 LEU A 168 1 6 HELIX 8 8 SER A 172 GLY A 183 1 12 HELIX 9 9 ASP A 187 ILE A 194 1 8 HELIX 10 10 ASP A 203 ARG A 217 1 15 HELIX 11 11 SER A 219 SER A 255 1 37 HELIX 12 12 SER A 255 GLU A 267 1 13 SHEET 1 A 6 LEU A 16 ALA A 20 0 SHEET 2 A 6 VAL A 29 ASN A 35 -1 O ASN A 35 N LEU A 16 SHEET 3 A 6 VAL A 66 HIS A 71 1 O VAL A 68 N LEU A 32 SHEET 4 A 6 VAL A 119 ILE A 123 1 O ILE A 120 N VAL A 67 SHEET 5 A 6 ILE A 140 ALA A 143 1 O VAL A 142 N ILE A 123 SHEET 6 A 6 MSE A 199 ALA A 200 1 O MSE A 199 N ALA A 143 SHEET 1 B 4 THR A 75 CYS A 77 0 SHEET 2 B 4 HIS A 126 ARG A 128 1 O ARG A 128 N CYS A 77 SHEET 3 B 4 SER A 148 ALA A 150 1 O SER A 148 N VAL A 127 SHEET 4 B 4 LYS A 185 PHE A 186 -1 O PHE A 186 N PHE A 149 LINK C ASP A 96 N MSE A 97 1555 1555 1.33 LINK C MSE A 97 N ALA A 98 1555 1555 1.33 LINK C GLU A 104 N MSE A 105 1555 1555 1.33 LINK C MSE A 105 N ALA A 106 1555 1555 1.33 LINK C LEU A 108 N MSE A 109 1555 1555 1.34 LINK C MSE A 109 N ARG A 110 1555 1555 1.32 LINK C THR A 198 N MSE A 199 1555 1555 1.33 LINK C MSE A 199 N ALA A 200 1555 1555 1.33 LINK C GLY A 261 N AMSE A 262 1555 1555 1.33 LINK C GLY A 261 N BMSE A 262 1555 1555 1.33 LINK C AMSE A 262 N LEU A 263 1555 1555 1.33 LINK C BMSE A 262 N LEU A 263 1555 1555 1.33 CRYST1 80.971 80.971 91.364 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012350 0.007130 0.000000 0.00000 SCALE2 0.000000 0.014261 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010945 0.00000