HEADER TRANSFERASE 12-MAY-13 4KOV TITLE CRYSTAL STRUCTURE OF A GNAT SUPERFAMILY ACETYLTRANSFERASE PA4794 IN TITLE 2 COMPLEX WITH CEFUROXIME COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: PAO1; SOURCE 5 GENE: PA4794; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: P11 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS, MCSG, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.A.MAJOREK,M.CHRUSZCZ,Z.OTWINOWSKI,A.JOACHIMIAK,W.MINOR,MIDWEST AUTHOR 2 CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 5 20-SEP-23 4KOV 1 REMARK REVDAT 4 13-APR-22 4KOV 1 AUTHOR JRNL REMARK SEQADV REVDAT 3 13-NOV-13 4KOV 1 JRNL REVDAT 2 18-SEP-13 4KOV 1 JRNL REVDAT 1 05-JUN-13 4KOV 0 JRNL AUTH K.A.MAJOREK,M.L.KUHN,M.CHRUSZCZ,W.F.ANDERSON,W.MINOR JRNL TITL STRUCTURAL, FUNCTIONAL, AND INHIBITION STUDIES OF A JRNL TITL 2 GCN5-RELATED N-ACETYLTRANSFERASE (GNAT) SUPERFAMILY PROTEIN JRNL TITL 3 PA4794: A NEW C-TERMINAL LYSINE PROTEIN ACETYLTRANSFERASE JRNL TITL 4 FROM PSEUDOMONAS AERUGINOSA. JRNL REF J.BIOL.CHEM. V. 288 30223 2013 JRNL REFN ISSN 0021-9258 JRNL PMID 24003232 JRNL DOI 10.1074/JBC.M113.501353 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.38 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 22861 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1227 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1637 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.89 REMARK 3 BIN R VALUE (WORKING SET) : 0.2500 REMARK 3 BIN FREE R VALUE SET COUNT : 109 REMARK 3 BIN FREE R VALUE : 0.2750 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1237 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 76 REMARK 3 SOLVENT ATOMS : 161 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.85000 REMARK 3 B22 (A**2) : -0.43000 REMARK 3 B33 (A**2) : 1.28000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.081 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.082 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.059 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.311 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.960 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1431 ; 0.019 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1365 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1936 ; 1.965 ; 1.982 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3118 ; 0.920 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 179 ; 5.498 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 67 ;35.860 ;22.687 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 220 ;14.464 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;19.957 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 202 ; 0.120 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1650 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 355 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 33 REMARK 3 ORIGIN FOR THE GROUP (A): 14.5850 14.9240 1.2660 REMARK 3 T TENSOR REMARK 3 T11: 0.2505 T22: 0.1160 REMARK 3 T33: 0.0313 T12: 0.0298 REMARK 3 T13: 0.0240 T23: 0.0245 REMARK 3 L TENSOR REMARK 3 L11: 1.0463 L22: 3.8694 REMARK 3 L33: 3.0279 L12: -1.4229 REMARK 3 L13: 0.6612 L23: -1.0783 REMARK 3 S TENSOR REMARK 3 S11: 0.1128 S12: 0.1051 S13: 0.1040 REMARK 3 S21: -0.3204 S22: -0.1869 S23: -0.1309 REMARK 3 S31: 0.1217 S32: 0.1345 S33: 0.0741 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 34 A 88 REMARK 3 ORIGIN FOR THE GROUP (A): 12.3670 14.0180 7.8160 REMARK 3 T TENSOR REMARK 3 T11: 0.2362 T22: 0.0929 REMARK 3 T33: 0.0130 T12: 0.0322 REMARK 3 T13: 0.0137 T23: 0.0127 REMARK 3 L TENSOR REMARK 3 L11: 1.0990 L22: 1.6484 REMARK 3 L33: 2.5726 L12: -0.3695 REMARK 3 L13: 0.7795 L23: -0.3327 REMARK 3 S TENSOR REMARK 3 S11: 0.0100 S12: 0.0123 S13: 0.0792 REMARK 3 S21: -0.0840 S22: 0.0361 S23: -0.0084 REMARK 3 S31: 0.1481 S32: -0.1311 S33: -0.0461 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 89 A 109 REMARK 3 ORIGIN FOR THE GROUP (A): 18.1070 19.2550 16.4100 REMARK 3 T TENSOR REMARK 3 T11: 0.2788 T22: 0.0770 REMARK 3 T33: 0.0263 T12: 0.0383 REMARK 3 T13: -0.0093 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 4.8449 L22: 3.5894 REMARK 3 L33: 6.1739 L12: 1.3136 REMARK 3 L13: -3.5381 L23: -2.4523 REMARK 3 S TENSOR REMARK 3 S11: 0.0595 S12: 0.0159 S13: 0.3098 REMARK 3 S21: 0.3124 S22: 0.0724 S23: 0.0390 REMARK 3 S31: -0.2930 S32: -0.1246 S33: -0.1320 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 110 A 139 REMARK 3 ORIGIN FOR THE GROUP (A): 25.0920 6.8780 14.3370 REMARK 3 T TENSOR REMARK 3 T11: 0.2757 T22: 0.0792 REMARK 3 T33: 0.0304 T12: 0.0314 REMARK 3 T13: -0.0014 T23: 0.0024 REMARK 3 L TENSOR REMARK 3 L11: 1.6112 L22: 2.1127 REMARK 3 L33: 1.7049 L12: -0.9401 REMARK 3 L13: -0.7224 L23: 1.6431 REMARK 3 S TENSOR REMARK 3 S11: 0.0735 S12: -0.0278 S13: 0.1284 REMARK 3 S21: -0.0175 S22: 0.0903 S23: -0.2231 REMARK 3 S31: -0.1536 S32: -0.0598 S33: -0.1639 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 140 A 159 REMARK 3 ORIGIN FOR THE GROUP (A): 21.3060 0.6180 10.9450 REMARK 3 T TENSOR REMARK 3 T11: 0.2982 T22: 0.1138 REMARK 3 T33: 0.0540 T12: 0.0159 REMARK 3 T13: -0.0097 T23: 0.0158 REMARK 3 L TENSOR REMARK 3 L11: 1.3475 L22: 3.4707 REMARK 3 L33: 3.9234 L12: 0.1635 REMARK 3 L13: 0.5611 L23: 2.5730 REMARK 3 S TENSOR REMARK 3 S11: -0.0105 S12: -0.1149 S13: -0.1229 REMARK 3 S21: -0.0812 S22: 0.1315 S23: 0.0194 REMARK 3 S31: -0.1387 S32: -0.0847 S33: -0.1209 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4KOV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000079608. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-NOV-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9790 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24348 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : 0.05500 REMARK 200 FOR THE DATA SET : 42.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : 0.66000 REMARK 200 R SYM FOR SHELL (I) : 0.66000 REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000 MOLREP REMARK 200 STARTING MODEL: 2I6C REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M AMMONIUM SULFATE, 0.1M BIS-TRIS PH REMARK 280 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 29.31050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.23600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.31050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.23600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -49.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 58.62100 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 PRO A 160 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 2 CG CD OE1 NE2 REMARK 470 LYS A 32 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 13 CB - CG - CD1 ANGL. DEV. = -10.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 30 73.40 -158.18 REMARK 500 TYR A 30 73.40 -159.04 REMARK 500 ASP A 74 -79.49 -131.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE KOV A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 209 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 210 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 211 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 212 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3PGP RELATED DB: PDB REMARK 900 IN COMPLEX WITH ACCOA REMARK 900 RELATED ID: 4KLV RELATED DB: PDB REMARK 900 IN COMPLEX WITH 4-METHYLUMBELLIFERYL PHOSPHATE REMARK 900 RELATED ID: 4KLW RELATED DB: PDB REMARK 900 IN COMPLEX WITH 2-(AMINOCARBONYL)BENZOATE REMARK 900 RELATED ID: 4KOR RELATED DB: PDB REMARK 900 IN COMPLEX WITH 7-AMINOCEPHALOSPORANIC ACID REMARK 900 RELATED ID: 4KOS RELATED DB: PDB REMARK 900 IN COMPLEX WITH CEFMETAZOLE REMARK 900 RELATED ID: 4KOT RELATED DB: PDB REMARK 900 IN COMPLEX WITH CEFOTAXIME REMARK 900 RELATED ID: 4KOU RELATED DB: PDB REMARK 900 IN COMPLEX WITH CEFIXIME REMARK 900 RELATED ID: 4KOV RELATED DB: PDB REMARK 900 IN COMPLEX WITH CEFUROXIME REMARK 900 RELATED ID: 4KOW RELATED DB: PDB REMARK 900 IN COMPLEX WITH CEFOXITIN REMARK 900 RELATED ID: 4KOX RELATED DB: PDB REMARK 900 IN COMPLEX WITH CEFALOTIN REMARK 900 RELATED ID: 4KOY RELATED DB: PDB REMARK 900 IN COMPLEX WITH CEPHALOSPORIN C REMARK 900 RELATED ID: 4KUA RELATED DB: PDB REMARK 900 APO FORM REMARK 900 RELATED ID: 4KUB RELATED DB: PDB REMARK 900 IN COMPLEX WITH COA REMARK 900 RELATED ID: MCSG-APC102304 RELATED DB: TARGETTRACK DBREF 4KOV A 1 160 UNP Q9HV14 Q9HV14_PSEAE 1 160 SEQADV 4KOV GLY A -1 UNP Q9HV14 EXPRESSION TAG SEQADV 4KOV HIS A 0 UNP Q9HV14 EXPRESSION TAG SEQRES 1 A 162 GLY HIS MET GLN LEU SER HIS ARG PRO ALA GLU THR GLY SEQRES 2 A 162 ASP LEU GLU THR VAL ALA GLY PHE PRO GLN ASP ARG ASP SEQRES 3 A 162 GLU LEU PHE TYR CYS TYR PRO LYS ALA ILE TRP PRO PHE SEQRES 4 A 162 SER VAL ALA GLN LEU ALA ALA ALA ILE ALA GLU ARG ARG SEQRES 5 A 162 GLY SER THR VAL ALA VAL HIS ASP GLY GLN VAL LEU GLY SEQRES 6 A 162 PHE ALA ASN PHE TYR GLN TRP GLN HIS GLY ASP PHE CYS SEQRES 7 A 162 ALA LEU GLY ASN MET MET VAL ALA PRO ALA ALA ARG GLY SEQRES 8 A 162 LEU GLY VAL ALA ARG TYR LEU ILE GLY VAL MET GLU ASN SEQRES 9 A 162 LEU ALA ARG GLU GLN TYR LYS ALA ARG LEU MET LYS ILE SEQRES 10 A 162 SER CYS PHE ASN ALA ASN ALA ALA GLY LEU LEU LEU TYR SEQRES 11 A 162 THR GLN LEU GLY TYR GLN PRO ARG ALA ILE ALA GLU ARG SEQRES 12 A 162 HIS ASP PRO ASP GLY ARG ARG VAL ALA LEU ILE GLN MET SEQRES 13 A 162 ASP LYS PRO LEU GLU PRO HET SO4 A 201 5 HET SO4 A 202 5 HET SO4 A 203 5 HET KOV A 204 29 HET EDO A 205 4 HET EDO A 206 4 HET EDO A 207 4 HET EDO A 208 4 HET EDO A 209 8 HET EDO A 210 8 HET EDO A 211 8 HET EDO A 212 4 HETNAM SO4 SULFATE ION HETNAM KOV (6R,7R)-3-[(CARBAMOYLOXY)METHYL]-7-{[(2Z)-2-(FURAN-2- HETNAM 2 KOV YL)-2-(METHOXYIMINO)ACETYL]AMINO}-8-OXO-5-THIA-1- HETNAM 3 KOV AZABICYCLO[4.2.0]OCT-2-ENE-2-CARBOXYLIC ACID HETNAM EDO 1,2-ETHANEDIOL HETSYN KOV CEFUROXIME HETSYN EDO ETHYLENE GLYCOL FORMUL 2 SO4 3(O4 S 2-) FORMUL 5 KOV C16 H16 N4 O8 S FORMUL 6 EDO 8(C2 H6 O2) FORMUL 14 HOH *161(H2 O) HELIX 1 1 GLU A 9 GLY A 11 5 3 HELIX 2 2 ASP A 12 GLY A 18 1 7 HELIX 3 3 ASP A 22 TYR A 30 1 9 HELIX 4 4 SER A 38 ARG A 49 1 12 HELIX 5 5 PRO A 85 ARG A 88 5 4 HELIX 6 6 GLY A 91 LYS A 109 1 19 HELIX 7 7 ASN A 121 LEU A 131 1 11 SHEET 1 A 7 SER A 4 PRO A 7 0 SHEET 2 A 7 ARG A 50 HIS A 57 -1 O VAL A 54 N ARG A 6 SHEET 3 A 7 GLN A 60 GLN A 71 -1 O LEU A 62 N ALA A 55 SHEET 4 A 7 PHE A 75 VAL A 83 -1 O GLY A 79 N ASN A 66 SHEET 5 A 7 LEU A 112 PHE A 118 1 O LYS A 114 N CYS A 76 SHEET 6 A 7 ARG A 148 PRO A 157 -1 O MET A 154 N ILE A 115 SHEET 7 A 7 GLN A 134 HIS A 142 -1 N ARG A 136 O GLN A 153 CISPEP 1 TRP A 35 PRO A 36 0 -0.34 SITE 1 AC1 10 GLY A 89 LEU A 90 GLY A 91 VAL A 92 SITE 2 AC1 10 ALA A 93 ARG A 94 LEU A 127 HOH A 334 SITE 3 AC1 10 HOH A 407 HOH A 456 SITE 1 AC2 7 GLN A 60 ARG A 141 HIS A 142 KOV A 204 SITE 2 AC2 7 HOH A 424 HOH A 425 HOH A 433 SITE 1 AC3 6 ARG A 50 GLY A 51 TYR A 108 HOH A 346 SITE 2 AC3 6 HOH A 412 HOH A 442 SITE 1 AC4 19 TYR A 28 CYS A 29 PRO A 31 ARG A 49 SITE 2 AC4 19 TYR A 68 GLY A 79 ASN A 80 MET A 81 SITE 3 AC4 19 ILE A 115 SER A 116 TYR A 128 ARG A 141 SITE 4 AC4 19 LEU A 151 SO4 A 202 HOH A 302 HOH A 306 SITE 5 AC4 19 HOH A 319 HOH A 366 HOH A 375 SITE 1 AC5 3 THR A 10 LEU A 13 EDO A 206 SITE 1 AC6 5 GLU A 9 THR A 10 EDO A 205 HOH A 313 SITE 2 AC6 5 HOH A 345 SITE 1 AC7 4 ASP A 24 PHE A 27 ASP A 143 HOH A 321 SITE 1 AC8 2 ARG A 141 GLN A 153 SITE 1 AC9 7 GLU A 25 CYS A 29 MET A 82 VAL A 83 SITE 2 AC9 7 ARG A 88 EDO A 210 HOH A 417 SITE 1 BC1 4 TYR A 28 ASN A 121 EDO A 209 HOH A 437 SITE 1 BC2 11 GLN A 21 ASP A 22 ARG A 23 TRP A 35 SITE 2 BC2 11 ASP A 74 ARG A 111 LEU A 112 HOH A 360 SITE 3 BC2 11 HOH A 370 HOH A 383 HOH A 441 SITE 1 BC3 7 GLU A 14 ALA A 17 GLY A 18 ARG A 111 SITE 2 BC3 7 HOH A 372 HOH A 447 HOH A 448 CRYST1 58.621 76.472 39.473 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017059 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013077 0.000000 0.00000 SCALE3 0.000000 0.000000 0.025334 0.00000