data_4KP0 # _entry.id 4KP0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4KP0 pdb_00004kp0 10.2210/pdb4kp0/pdb RCSB RCSB079613 ? ? WWPDB D_1000079613 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4KP0 _pdbx_database_status.recvd_initial_deposition_date 2013-05-12 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kakuda, S.' 1 'Takimoto-Kamimura, M.' 2 # _citation.id primary _citation.title 'Crystal structure of a complex of human chymase with its benzimidazole derived inhibitor' _citation.journal_abbrev 'J.SYNCHROTRON RADIAT.' _citation.journal_volume 20 _citation.page_first 914 _citation.page_last 918 _citation.year 2013 _citation.journal_id_ASTM JSYRES _citation.country DK _citation.journal_id_ISSN 0909-0495 _citation.journal_id_CSD 1210 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24121339 _citation.pdbx_database_id_DOI 10.1107/S0909049513020748 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Matsumoto, Y.' 1 ? primary 'Kakuda, S.' 2 ? primary 'Koizumi, M.' 3 ? primary 'Mizuno, T.' 4 ? primary 'Muroga, Y.' 5 ? primary 'Kawamura, T.' 6 ? primary 'Takimoto-Kamimura, M.' 7 ? # _cell.entry_id 4KP0 _cell.length_a 56.920 _cell.length_b 56.920 _cell.length_c 177.490 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4KP0 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Chymase 25066.969 1 3.4.21.39 ? ? ? 2 non-polymer syn '4-({1-[(4-methyl-1-benzothiophen-3-yl)methyl]-1H-benzimidazol-2-yl}sulfanyl)butanoic acid' 396.526 1 ? ? ? ? 3 water nat water 18.015 12 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Alpha-chymase, Mast cell protease I' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAGRSITVTLGAHNITEEEDTWQKLEVIKQFRHPK YNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFRDF DHNLQLCVGNPRKTKSAFKGDSGGPLLCAGVAQGIVSYGRSDAKPPAVFTRISHYRPWINQILQAN ; _entity_poly.pdbx_seq_one_letter_code_can ;IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAGRSITVTLGAHNITEEEDTWQKLEVIKQFRHPK YNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFRDF DHNLQLCVGNPRKTKSAFKGDSGGPLLCAGVAQGIVSYGRSDAKPPAVFTRISHYRPWINQILQAN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 ILE n 1 3 GLY n 1 4 GLY n 1 5 THR n 1 6 GLU n 1 7 CYS n 1 8 LYS n 1 9 PRO n 1 10 HIS n 1 11 SER n 1 12 ARG n 1 13 PRO n 1 14 TYR n 1 15 MET n 1 16 ALA n 1 17 TYR n 1 18 LEU n 1 19 GLU n 1 20 ILE n 1 21 VAL n 1 22 THR n 1 23 SER n 1 24 ASN n 1 25 GLY n 1 26 PRO n 1 27 SER n 1 28 LYS n 1 29 PHE n 1 30 CYS n 1 31 GLY n 1 32 GLY n 1 33 PHE n 1 34 LEU n 1 35 ILE n 1 36 ARG n 1 37 ARG n 1 38 ASN n 1 39 PHE n 1 40 VAL n 1 41 LEU n 1 42 THR n 1 43 ALA n 1 44 ALA n 1 45 HIS n 1 46 CYS n 1 47 ALA n 1 48 GLY n 1 49 ARG n 1 50 SER n 1 51 ILE n 1 52 THR n 1 53 VAL n 1 54 THR n 1 55 LEU n 1 56 GLY n 1 57 ALA n 1 58 HIS n 1 59 ASN n 1 60 ILE n 1 61 THR n 1 62 GLU n 1 63 GLU n 1 64 GLU n 1 65 ASP n 1 66 THR n 1 67 TRP n 1 68 GLN n 1 69 LYS n 1 70 LEU n 1 71 GLU n 1 72 VAL n 1 73 ILE n 1 74 LYS n 1 75 GLN n 1 76 PHE n 1 77 ARG n 1 78 HIS n 1 79 PRO n 1 80 LYS n 1 81 TYR n 1 82 ASN n 1 83 THR n 1 84 SER n 1 85 THR n 1 86 LEU n 1 87 HIS n 1 88 HIS n 1 89 ASP n 1 90 ILE n 1 91 MET n 1 92 LEU n 1 93 LEU n 1 94 LYS n 1 95 LEU n 1 96 LYS n 1 97 GLU n 1 98 LYS n 1 99 ALA n 1 100 SER n 1 101 LEU n 1 102 THR n 1 103 LEU n 1 104 ALA n 1 105 VAL n 1 106 GLY n 1 107 THR n 1 108 LEU n 1 109 PRO n 1 110 PHE n 1 111 PRO n 1 112 SER n 1 113 GLN n 1 114 PHE n 1 115 ASN n 1 116 PHE n 1 117 VAL n 1 118 PRO n 1 119 PRO n 1 120 GLY n 1 121 ARG n 1 122 MET n 1 123 CYS n 1 124 ARG n 1 125 VAL n 1 126 ALA n 1 127 GLY n 1 128 TRP n 1 129 GLY n 1 130 ARG n 1 131 THR n 1 132 GLY n 1 133 VAL n 1 134 LEU n 1 135 LYS n 1 136 PRO n 1 137 GLY n 1 138 SER n 1 139 ASP n 1 140 THR n 1 141 LEU n 1 142 GLN n 1 143 GLU n 1 144 VAL n 1 145 LYS n 1 146 LEU n 1 147 ARG n 1 148 LEU n 1 149 MET n 1 150 ASP n 1 151 PRO n 1 152 GLN n 1 153 ALA n 1 154 CYS n 1 155 SER n 1 156 HIS n 1 157 PHE n 1 158 ARG n 1 159 ASP n 1 160 PHE n 1 161 ASP n 1 162 HIS n 1 163 ASN n 1 164 LEU n 1 165 GLN n 1 166 LEU n 1 167 CYS n 1 168 VAL n 1 169 GLY n 1 170 ASN n 1 171 PRO n 1 172 ARG n 1 173 LYS n 1 174 THR n 1 175 LYS n 1 176 SER n 1 177 ALA n 1 178 PHE n 1 179 LYS n 1 180 GLY n 1 181 ASP n 1 182 SER n 1 183 GLY n 1 184 GLY n 1 185 PRO n 1 186 LEU n 1 187 LEU n 1 188 CYS n 1 189 ALA n 1 190 GLY n 1 191 VAL n 1 192 ALA n 1 193 GLN n 1 194 GLY n 1 195 ILE n 1 196 VAL n 1 197 SER n 1 198 TYR n 1 199 GLY n 1 200 ARG n 1 201 SER n 1 202 ASP n 1 203 ALA n 1 204 LYS n 1 205 PRO n 1 206 PRO n 1 207 ALA n 1 208 VAL n 1 209 PHE n 1 210 THR n 1 211 ARG n 1 212 ILE n 1 213 SER n 1 214 HIS n 1 215 TYR n 1 216 ARG n 1 217 PRO n 1 218 TRP n 1 219 ILE n 1 220 ASN n 1 221 GLN n 1 222 ILE n 1 223 LEU n 1 224 GLN n 1 225 ALA n 1 226 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CMA1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'fall armyworm' _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type baculovirus _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CMA1_HUMAN _struct_ref.pdbx_db_accession P23946 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAGRSITVTLGAHNITEEEDTWQKLEVIKQFRHPK YNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFRDF DHNLQLCVGNPRKTKSAFKGDSGGPLLCAGVAQGIVSYGRSDAKPPAVFTRISHYRPWINQILQAN ; _struct_ref.pdbx_align_begin 22 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4KP0 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 226 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P23946 _struct_ref_seq.db_align_beg 22 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 247 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 16 _struct_ref_seq.pdbx_auth_seq_align_end 245 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 KPK non-polymer . '4-({1-[(4-methyl-1-benzothiophen-3-yl)methyl]-1H-benzimidazol-2-yl}sulfanyl)butanoic acid' ? 'C21 H20 N2 O2 S2' 396.526 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4KP0 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.87 _exptl_crystal.density_percent_sol 57.11 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pdbx_details '100mM sodium citrate, 15% PEG1500, 20% 2-propanol, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE AR-NW12A' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline AR-NW12A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.000 # _reflns.entry_id 4KP0 _reflns.observed_criterion_sigma_I 3 _reflns.observed_criterion_sigma_F 3 _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 2.80 _reflns.number_obs ? _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 15.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.80 _reflns_shell.d_res_low 2.90 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 30.3 _reflns_shell.pdbx_redundancy 13.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 27558 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4KP0 _refine.ls_number_reflns_obs 7391 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 41.0 _refine.ls_d_res_high 2.80 _refine.ls_percent_reflns_obs 100.0 _refine.ls_R_factor_obs 0.2415 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2258 _refine.ls_R_factor_R_free 0.3302 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 352 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1KLT' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1709 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 27 _refine_hist.number_atoms_solvent 12 _refine_hist.number_atoms_total 1748 _refine_hist.d_res_high 2.80 _refine_hist.d_res_low 41.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.0122 ? ? ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.697 ? ? ? ? 'X-RAY DIFFRACTION' # _struct.entry_id 4KP0 _struct.title 'Crystal Structure of the human Chymase with TJK002' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4KP0 _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'Hydrolase, Protease, Serine protease, benzimidazole, HYDROLASE-HYDROLASE INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 43 ? ALA A 47 ? ALA A 55 ALA A 59 5 ? 5 HELX_P HELX_P2 2 TYR A 215 ? LEU A 223 ? TYR A 234 LEU A 242 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 30 SG ? ? ? 1_555 A CYS 46 SG ? ? A CYS 42 A CYS 58 1_555 ? ? ? ? ? ? ? 2.043 ? ? disulf2 disulf ? ? A CYS 123 SG ? ? ? 1_555 A CYS 188 SG ? ? A CYS 136 A CYS 201 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf3 disulf ? ? A CYS 154 SG ? ? ? 1_555 A CYS 167 SG ? ? A CYS 168 A CYS 182 1_555 ? ? ? ? ? ? ? 2.070 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PRO 119 A . ? PRO 132 A GLY 120 A ? GLY 133 A 1 -21.66 2 PRO 205 A . ? PRO 224 A PRO 206 A ? PRO 225 A 1 5.22 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 5 ? GLU A 6 ? THR A 20 GLU A 21 A 2 GLN A 142 ? ARG A 147 ? GLN A 156 ARG A 161 A 3 MET A 122 ? GLY A 127 ? MET A 135 GLY A 140 A 4 PRO A 185 ? CYS A 188 ? PRO A 198 CYS A 201 A 5 VAL A 191 ? TYR A 198 ? VAL A 208 TYR A 215 A 6 ALA A 207 ? ARG A 211 ? ALA A 226 ARG A 230 A 7 GLN A 165 ? VAL A 168 ? GLN A 180 VAL A 183 B 1 MET A 15 ? VAL A 21 ? MET A 30 VAL A 36 B 2 LYS A 28 ? ARG A 36 ? LYS A 40 ARG A 48 B 3 PHE A 39 ? THR A 42 ? PHE A 51 THR A 54 B 4 MET A 91 ? LEU A 95 ? MET A 104 LEU A 108 B 5 GLN A 68 ? ARG A 77 ? GLN A 81 ARG A 90 B 6 SER A 50 ? LEU A 55 ? SER A 63 LEU A 68 B 7 MET A 15 ? VAL A 21 ? MET A 30 VAL A 36 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 5 ? N THR A 20 O GLU A 143 ? O GLU A 157 A 2 3 O VAL A 144 ? O VAL A 158 N VAL A 125 ? N VAL A 138 A 3 4 N ARG A 124 ? N ARG A 137 O LEU A 187 ? O LEU A 200 A 4 5 N CYS A 188 ? N CYS A 201 O VAL A 191 ? O VAL A 208 A 5 6 N ILE A 195 ? N ILE A 212 O THR A 210 ? O THR A 229 A 6 7 O PHE A 209 ? O PHE A 228 N LEU A 166 ? N LEU A 181 B 1 2 N LEU A 18 ? N LEU A 33 O CYS A 30 ? O CYS A 42 B 2 3 N ILE A 35 ? N ILE A 47 O PHE A 39 ? O PHE A 51 B 3 4 N THR A 42 ? N THR A 54 O MET A 91 ? O MET A 104 B 4 5 O LEU A 92 ? O LEU A 105 N PHE A 76 ? N PHE A 89 B 5 6 O GLN A 68 ? O GLN A 81 N LEU A 55 ? N LEU A 68 B 6 7 O THR A 54 ? O THR A 67 N TYR A 17 ? N TYR A 32 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id KPK _struct_site.pdbx_auth_seq_id 301 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 11 _struct_site.details 'BINDING SITE FOR RESIDUE KPK A 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 11 HIS A 45 ? HIS A 57 . ? 1_555 ? 2 AC1 11 ASP A 65 ? ASP A 78 . ? 5_544 ? 3 AC1 11 ALA A 177 ? ALA A 190 . ? 1_555 ? 4 AC1 11 PHE A 178 ? PHE A 191 . ? 1_555 ? 5 AC1 11 LYS A 179 ? LYS A 192 . ? 1_555 ? 6 AC1 11 GLY A 180 ? GLY A 193 . ? 1_555 ? 7 AC1 11 SER A 182 ? SER A 195 . ? 1_555 ? 8 AC1 11 VAL A 196 ? VAL A 213 . ? 1_555 ? 9 AC1 11 SER A 197 ? SER A 214 . ? 1_555 ? 10 AC1 11 GLY A 199 ? GLY A 216 . ? 1_555 ? 11 AC1 11 ARG A 200 ? ARG A 217 . ? 1_555 ? # _database_PDB_matrix.entry_id 4KP0 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4KP0 _atom_sites.fract_transf_matrix[1][1] 0.017569 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017569 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005634 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 16 16 ILE ILE A . n A 1 2 ILE 2 17 17 ILE ILE A . n A 1 3 GLY 3 18 18 GLY GLY A . n A 1 4 GLY 4 19 19 GLY GLY A . n A 1 5 THR 5 20 20 THR THR A . n A 1 6 GLU 6 21 21 GLU GLU A . n A 1 7 CYS 7 22 22 CYS CYS A . n A 1 8 LYS 8 23 23 LYS LYS A . n A 1 9 PRO 9 24 24 PRO PRO A . n A 1 10 HIS 10 25 25 HIS HIS A . n A 1 11 SER 11 26 26 SER SER A . n A 1 12 ARG 12 27 27 ARG ARG A . n A 1 13 PRO 13 28 28 PRO PRO A . n A 1 14 TYR 14 29 29 TYR TYR A . n A 1 15 MET 15 30 30 MET MET A . n A 1 16 ALA 16 31 31 ALA ALA A . n A 1 17 TYR 17 32 32 TYR TYR A . n A 1 18 LEU 18 33 33 LEU LEU A . n A 1 19 GLU 19 34 34 GLU GLU A . n A 1 20 ILE 20 35 35 ILE ILE A . n A 1 21 VAL 21 36 36 VAL VAL A . n A 1 22 THR 22 36 36 THR THR A A n A 1 23 SER 23 36 36 SER SER A B n A 1 24 ASN 24 36 36 ASN ASN A C n A 1 25 GLY 25 37 37 GLY GLY A . n A 1 26 PRO 26 38 38 PRO PRO A . n A 1 27 SER 27 39 39 SER SER A . n A 1 28 LYS 28 40 40 LYS LYS A . n A 1 29 PHE 29 41 41 PHE PHE A . n A 1 30 CYS 30 42 42 CYS CYS A . n A 1 31 GLY 31 43 43 GLY GLY A . n A 1 32 GLY 32 44 44 GLY GLY A . n A 1 33 PHE 33 45 45 PHE PHE A . n A 1 34 LEU 34 46 46 LEU LEU A . n A 1 35 ILE 35 47 47 ILE ILE A . n A 1 36 ARG 36 48 48 ARG ARG A . n A 1 37 ARG 37 49 49 ARG ARG A . n A 1 38 ASN 38 50 50 ASN ASN A . n A 1 39 PHE 39 51 51 PHE PHE A . n A 1 40 VAL 40 52 52 VAL VAL A . n A 1 41 LEU 41 53 53 LEU LEU A . n A 1 42 THR 42 54 54 THR THR A . n A 1 43 ALA 43 55 55 ALA ALA A . n A 1 44 ALA 44 56 56 ALA ALA A . n A 1 45 HIS 45 57 57 HIS HIS A . n A 1 46 CYS 46 58 58 CYS CYS A . n A 1 47 ALA 47 59 59 ALA ALA A . n A 1 48 GLY 48 60 60 GLY GLY A . n A 1 49 ARG 49 61 61 ARG ARG A . n A 1 50 SER 50 63 63 SER SER A . n A 1 51 ILE 51 64 64 ILE ILE A . n A 1 52 THR 52 65 65 THR THR A . n A 1 53 VAL 53 66 66 VAL VAL A . n A 1 54 THR 54 67 67 THR THR A . n A 1 55 LEU 55 68 68 LEU LEU A . n A 1 56 GLY 56 69 69 GLY GLY A . n A 1 57 ALA 57 70 70 ALA ALA A . n A 1 58 HIS 58 71 71 HIS HIS A . n A 1 59 ASN 59 72 72 ASN ASN A . n A 1 60 ILE 60 73 73 ILE ILE A . n A 1 61 THR 61 74 74 THR THR A . n A 1 62 GLU 62 75 75 GLU GLU A . n A 1 63 GLU 63 76 76 GLU GLU A . n A 1 64 GLU 64 77 77 GLU GLU A . n A 1 65 ASP 65 78 78 ASP ASP A . n A 1 66 THR 66 79 79 THR THR A . n A 1 67 TRP 67 80 80 TRP TRP A . n A 1 68 GLN 68 81 81 GLN GLN A . n A 1 69 LYS 69 82 82 LYS LYS A . n A 1 70 LEU 70 83 83 LEU LEU A . n A 1 71 GLU 71 84 84 GLU GLU A . n A 1 72 VAL 72 85 85 VAL VAL A . n A 1 73 ILE 73 86 86 ILE ILE A . n A 1 74 LYS 74 87 87 LYS LYS A . n A 1 75 GLN 75 88 88 GLN GLN A . n A 1 76 PHE 76 89 89 PHE PHE A . n A 1 77 ARG 77 90 90 ARG ARG A . n A 1 78 HIS 78 91 91 HIS HIS A . n A 1 79 PRO 79 92 92 PRO PRO A . n A 1 80 LYS 80 93 93 LYS LYS A . n A 1 81 TYR 81 94 94 TYR TYR A . n A 1 82 ASN 82 95 95 ASN ASN A . n A 1 83 THR 83 96 96 THR THR A . n A 1 84 SER 84 97 97 SER SER A . n A 1 85 THR 85 98 98 THR THR A . n A 1 86 LEU 86 99 99 LEU LEU A . n A 1 87 HIS 87 100 100 HIS HIS A . n A 1 88 HIS 88 101 101 HIS HIS A . n A 1 89 ASP 89 102 102 ASP ASP A . n A 1 90 ILE 90 103 103 ILE ILE A . n A 1 91 MET 91 104 104 MET MET A . n A 1 92 LEU 92 105 105 LEU LEU A . n A 1 93 LEU 93 106 106 LEU LEU A . n A 1 94 LYS 94 107 107 LYS LYS A . n A 1 95 LEU 95 108 108 LEU LEU A . n A 1 96 LYS 96 109 109 LYS LYS A . n A 1 97 GLU 97 110 110 GLU GLU A . n A 1 98 LYS 98 111 111 LYS LYS A . n A 1 99 ALA 99 112 112 ALA ALA A . n A 1 100 SER 100 113 113 SER SER A . n A 1 101 LEU 101 114 114 LEU LEU A . n A 1 102 THR 102 115 115 THR THR A . n A 1 103 LEU 103 116 116 LEU LEU A . n A 1 104 ALA 104 117 117 ALA ALA A . n A 1 105 VAL 105 118 118 VAL VAL A . n A 1 106 GLY 106 119 119 GLY GLY A . n A 1 107 THR 107 120 120 THR THR A . n A 1 108 LEU 108 121 121 LEU LEU A . n A 1 109 PRO 109 122 122 PRO PRO A . n A 1 110 PHE 110 123 123 PHE PHE A . n A 1 111 PRO 111 124 ? ? ? A . n A 1 112 SER 112 125 ? ? ? A . n A 1 113 GLN 113 126 ? ? ? A . n A 1 114 PHE 114 127 ? ? ? A . n A 1 115 ASN 115 128 ? ? ? A . n A 1 116 PHE 116 129 ? ? ? A . n A 1 117 VAL 117 130 130 VAL VAL A . n A 1 118 PRO 118 131 131 PRO PRO A . n A 1 119 PRO 119 132 132 PRO PRO A . n A 1 120 GLY 120 133 133 GLY GLY A . n A 1 121 ARG 121 134 134 ARG ARG A . n A 1 122 MET 122 135 135 MET MET A . n A 1 123 CYS 123 136 136 CYS CYS A . n A 1 124 ARG 124 137 137 ARG ARG A . n A 1 125 VAL 125 138 138 VAL VAL A . n A 1 126 ALA 126 139 139 ALA ALA A . n A 1 127 GLY 127 140 140 GLY GLY A . n A 1 128 TRP 128 141 141 TRP TRP A . n A 1 129 GLY 129 142 142 GLY GLY A . n A 1 130 ARG 130 143 143 ARG ARG A . n A 1 131 THR 131 144 144 THR THR A . n A 1 132 GLY 132 145 145 GLY GLY A . n A 1 133 VAL 133 146 146 VAL VAL A . n A 1 134 LEU 134 147 147 LEU LEU A . n A 1 135 LYS 135 148 148 LYS LYS A . n A 1 136 PRO 136 150 150 PRO PRO A . n A 1 137 GLY 137 151 151 GLY GLY A . n A 1 138 SER 138 152 152 SER SER A . n A 1 139 ASP 139 153 153 ASP ASP A . n A 1 140 THR 140 154 154 THR THR A . n A 1 141 LEU 141 155 155 LEU LEU A . n A 1 142 GLN 142 156 156 GLN GLN A . n A 1 143 GLU 143 157 157 GLU GLU A . n A 1 144 VAL 144 158 158 VAL VAL A . n A 1 145 LYS 145 159 159 LYS LYS A . n A 1 146 LEU 146 160 160 LEU LEU A . n A 1 147 ARG 147 161 161 ARG ARG A . n A 1 148 LEU 148 162 162 LEU LEU A . n A 1 149 MET 149 163 163 MET MET A . n A 1 150 ASP 150 164 164 ASP ASP A . n A 1 151 PRO 151 165 165 PRO PRO A . n A 1 152 GLN 152 166 166 GLN GLN A . n A 1 153 ALA 153 167 167 ALA ALA A . n A 1 154 CYS 154 168 168 CYS CYS A . n A 1 155 SER 155 169 169 SER SER A . n A 1 156 HIS 156 172 172 HIS HIS A . n A 1 157 PHE 157 173 173 PHE PHE A . n A 1 158 ARG 158 174 174 ARG ARG A . n A 1 159 ASP 159 175 175 ASP ASP A . n A 1 160 PHE 160 176 176 PHE PHE A . n A 1 161 ASP 161 177 177 ASP ASP A . n A 1 162 HIS 162 178 178 HIS HIS A . n A 1 163 ASN 163 178 178 ASN ASN A A n A 1 164 LEU 164 179 179 LEU LEU A . n A 1 165 GLN 165 180 180 GLN GLN A . n A 1 166 LEU 166 181 181 LEU LEU A . n A 1 167 CYS 167 182 182 CYS CYS A . n A 1 168 VAL 168 183 183 VAL VAL A . n A 1 169 GLY 169 184 184 GLY GLY A . n A 1 170 ASN 170 185 185 ASN ASN A . n A 1 171 PRO 171 186 186 PRO PRO A . n A 1 172 ARG 172 186 186 ARG ARG A A n A 1 173 LYS 173 186 186 LYS LYS A B n A 1 174 THR 174 187 187 THR THR A . n A 1 175 LYS 175 188 188 LYS LYS A . n A 1 176 SER 176 189 189 SER SER A . n A 1 177 ALA 177 190 190 ALA ALA A . n A 1 178 PHE 178 191 191 PHE PHE A . n A 1 179 LYS 179 192 192 LYS LYS A . n A 1 180 GLY 180 193 193 GLY GLY A . n A 1 181 ASP 181 194 194 ASP ASP A . n A 1 182 SER 182 195 195 SER SER A . n A 1 183 GLY 183 196 196 GLY GLY A . n A 1 184 GLY 184 197 197 GLY GLY A . n A 1 185 PRO 185 198 198 PRO PRO A . n A 1 186 LEU 186 199 199 LEU LEU A . n A 1 187 LEU 187 200 200 LEU LEU A . n A 1 188 CYS 188 201 201 CYS CYS A . n A 1 189 ALA 189 202 202 ALA ALA A . n A 1 190 GLY 190 207 207 GLY GLY A . n A 1 191 VAL 191 208 208 VAL VAL A . n A 1 192 ALA 192 209 209 ALA ALA A . n A 1 193 GLN 193 210 210 GLN GLN A . n A 1 194 GLY 194 211 211 GLY GLY A . n A 1 195 ILE 195 212 212 ILE ILE A . n A 1 196 VAL 196 213 213 VAL VAL A . n A 1 197 SER 197 214 214 SER SER A . n A 1 198 TYR 198 215 215 TYR TYR A . n A 1 199 GLY 199 216 216 GLY GLY A . n A 1 200 ARG 200 217 217 ARG ARG A . n A 1 201 SER 201 218 218 SER SER A . n A 1 202 ASP 202 219 219 ASP ASP A . n A 1 203 ALA 203 220 220 ALA ALA A . n A 1 204 LYS 204 221 221 LYS LYS A . n A 1 205 PRO 205 224 224 PRO PRO A . n A 1 206 PRO 206 225 225 PRO PRO A . n A 1 207 ALA 207 226 226 ALA ALA A . n A 1 208 VAL 208 227 227 VAL VAL A . n A 1 209 PHE 209 228 228 PHE PHE A . n A 1 210 THR 210 229 229 THR THR A . n A 1 211 ARG 211 230 230 ARG ARG A . n A 1 212 ILE 212 231 231 ILE ILE A . n A 1 213 SER 213 232 232 SER SER A . n A 1 214 HIS 214 233 233 HIS HIS A . n A 1 215 TYR 215 234 234 TYR TYR A . n A 1 216 ARG 216 235 235 ARG ARG A . n A 1 217 PRO 217 236 236 PRO PRO A . n A 1 218 TRP 218 237 237 TRP TRP A . n A 1 219 ILE 219 238 238 ILE ILE A . n A 1 220 ASN 220 239 239 ASN ASN A . n A 1 221 GLN 221 240 240 GLN GLN A . n A 1 222 ILE 222 241 241 ILE ILE A . n A 1 223 LEU 223 242 242 LEU LEU A . n A 1 224 GLN 224 243 243 GLN GLN A . n A 1 225 ALA 225 244 244 ALA ALA A . n A 1 226 ASN 226 245 245 ASN ASN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 KPK 1 301 37 KPK MOL A . C 3 HOH 1 401 38 HOH HOH A . C 3 HOH 2 402 39 HOH HOH A . C 3 HOH 3 403 40 HOH HOH A . C 3 HOH 4 404 41 HOH HOH A . C 3 HOH 5 405 42 HOH HOH A . C 3 HOH 6 406 43 HOH HOH A . C 3 HOH 7 407 44 HOH HOH A . C 3 HOH 8 408 45 HOH HOH A . C 3 HOH 9 409 46 HOH HOH A . C 3 HOH 10 410 47 HOH HOH A . C 3 HOH 11 411 48 HOH HOH A . C 3 HOH 12 412 49 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-10-30 2 'Structure model' 1 1 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.50109 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C A PRO 131 ? ? N A PRO 132 ? ? CA A PRO 132 ? ? 134.71 119.30 15.41 1.50 Y 2 1 C A PRO 131 ? ? N A PRO 132 ? ? CD A PRO 132 ? ? 112.89 128.40 -15.51 2.10 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 36 C ? -74.08 -129.81 2 1 PRO A 38 ? ? -53.50 -119.76 3 1 SER A 39 ? ? 42.16 87.72 4 1 HIS A 71 ? ? -125.78 -63.16 5 1 PHE A 89 ? ? -106.70 73.41 6 1 PRO A 122 ? ? -48.05 103.20 7 1 PRO A 132 ? ? -45.90 -108.75 8 1 PRO A 165 ? ? -56.49 -9.24 9 1 ARG A 174 ? ? -39.32 -35.90 10 1 ALA A 202 ? ? 35.62 62.88 11 1 SER A 214 ? ? -123.81 -64.96 12 1 ALA A 220 ? ? 84.96 -11.84 13 1 ALA A 244 ? ? -77.19 -167.30 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A PRO 124 ? A PRO 111 2 1 Y 1 A SER 125 ? A SER 112 3 1 Y 1 A GLN 126 ? A GLN 113 4 1 Y 1 A PHE 127 ? A PHE 114 5 1 Y 1 A ASN 128 ? A ASN 115 6 1 Y 1 A PHE 129 ? A PHE 116 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 KPK O27 O N N 183 KPK C24 C N N 184 KPK O26 O N N 185 KPK C20 C N N 186 KPK C16 C N N 187 KPK C12 C N N 188 KPK S8 S N N 189 KPK C3 C Y N 190 KPK N7 N Y N 191 KPK C5 C Y N 192 KPK C10 C Y N 193 KPK C15 C Y N 194 KPK C11 C Y N 195 KPK C6 C Y N 196 KPK C2 C Y N 197 KPK N1 N Y N 198 KPK C4 C N N 199 KPK C9 C Y N 200 KPK C14 C Y N 201 KPK S19 S Y N 202 KPK C17 C Y N 203 KPK C21 C Y N 204 KPK C25 C Y N 205 KPK C22 C Y N 206 KPK C18 C Y N 207 KPK C13 C Y N 208 KPK C23 C N N 209 KPK H1 H N N 210 KPK H2 H N N 211 KPK H3 H N N 212 KPK H4 H N N 213 KPK H5 H N N 214 KPK H6 H N N 215 KPK H7 H N N 216 KPK H8 H N N 217 KPK H9 H N N 218 KPK H10 H N N 219 KPK H11 H N N 220 KPK H12 H N N 221 KPK H13 H N N 222 KPK H14 H N N 223 KPK H15 H N N 224 KPK H16 H N N 225 KPK H17 H N N 226 KPK H18 H N N 227 KPK H19 H N N 228 KPK H20 H N N 229 LEU N N N N 230 LEU CA C N S 231 LEU C C N N 232 LEU O O N N 233 LEU CB C N N 234 LEU CG C N N 235 LEU CD1 C N N 236 LEU CD2 C N N 237 LEU OXT O N N 238 LEU H H N N 239 LEU H2 H N N 240 LEU HA H N N 241 LEU HB2 H N N 242 LEU HB3 H N N 243 LEU HG H N N 244 LEU HD11 H N N 245 LEU HD12 H N N 246 LEU HD13 H N N 247 LEU HD21 H N N 248 LEU HD22 H N N 249 LEU HD23 H N N 250 LEU HXT H N N 251 LYS N N N N 252 LYS CA C N S 253 LYS C C N N 254 LYS O O N N 255 LYS CB C N N 256 LYS CG C N N 257 LYS CD C N N 258 LYS CE C N N 259 LYS NZ N N N 260 LYS OXT O N N 261 LYS H H N N 262 LYS H2 H N N 263 LYS HA H N N 264 LYS HB2 H N N 265 LYS HB3 H N N 266 LYS HG2 H N N 267 LYS HG3 H N N 268 LYS HD2 H N N 269 LYS HD3 H N N 270 LYS HE2 H N N 271 LYS HE3 H N N 272 LYS HZ1 H N N 273 LYS HZ2 H N N 274 LYS HZ3 H N N 275 LYS HXT H N N 276 MET N N N N 277 MET CA C N S 278 MET C C N N 279 MET O O N N 280 MET CB C N N 281 MET CG C N N 282 MET SD S N N 283 MET CE C N N 284 MET OXT O N N 285 MET H H N N 286 MET H2 H N N 287 MET HA H N N 288 MET HB2 H N N 289 MET HB3 H N N 290 MET HG2 H N N 291 MET HG3 H N N 292 MET HE1 H N N 293 MET HE2 H N N 294 MET HE3 H N N 295 MET HXT H N N 296 PHE N N N N 297 PHE CA C N S 298 PHE C C N N 299 PHE O O N N 300 PHE CB C N N 301 PHE CG C Y N 302 PHE CD1 C Y N 303 PHE CD2 C Y N 304 PHE CE1 C Y N 305 PHE CE2 C Y N 306 PHE CZ C Y N 307 PHE OXT O N N 308 PHE H H N N 309 PHE H2 H N N 310 PHE HA H N N 311 PHE HB2 H N N 312 PHE HB3 H N N 313 PHE HD1 H N N 314 PHE HD2 H N N 315 PHE HE1 H N N 316 PHE HE2 H N N 317 PHE HZ H N N 318 PHE HXT H N N 319 PRO N N N N 320 PRO CA C N S 321 PRO C C N N 322 PRO O O N N 323 PRO CB C N N 324 PRO CG C N N 325 PRO CD C N N 326 PRO OXT O N N 327 PRO H H N N 328 PRO HA H N N 329 PRO HB2 H N N 330 PRO HB3 H N N 331 PRO HG2 H N N 332 PRO HG3 H N N 333 PRO HD2 H N N 334 PRO HD3 H N N 335 PRO HXT H N N 336 SER N N N N 337 SER CA C N S 338 SER C C N N 339 SER O O N N 340 SER CB C N N 341 SER OG O N N 342 SER OXT O N N 343 SER H H N N 344 SER H2 H N N 345 SER HA H N N 346 SER HB2 H N N 347 SER HB3 H N N 348 SER HG H N N 349 SER HXT H N N 350 THR N N N N 351 THR CA C N S 352 THR C C N N 353 THR O O N N 354 THR CB C N R 355 THR OG1 O N N 356 THR CG2 C N N 357 THR OXT O N N 358 THR H H N N 359 THR H2 H N N 360 THR HA H N N 361 THR HB H N N 362 THR HG1 H N N 363 THR HG21 H N N 364 THR HG22 H N N 365 THR HG23 H N N 366 THR HXT H N N 367 TRP N N N N 368 TRP CA C N S 369 TRP C C N N 370 TRP O O N N 371 TRP CB C N N 372 TRP CG C Y N 373 TRP CD1 C Y N 374 TRP CD2 C Y N 375 TRP NE1 N Y N 376 TRP CE2 C Y N 377 TRP CE3 C Y N 378 TRP CZ2 C Y N 379 TRP CZ3 C Y N 380 TRP CH2 C Y N 381 TRP OXT O N N 382 TRP H H N N 383 TRP H2 H N N 384 TRP HA H N N 385 TRP HB2 H N N 386 TRP HB3 H N N 387 TRP HD1 H N N 388 TRP HE1 H N N 389 TRP HE3 H N N 390 TRP HZ2 H N N 391 TRP HZ3 H N N 392 TRP HH2 H N N 393 TRP HXT H N N 394 TYR N N N N 395 TYR CA C N S 396 TYR C C N N 397 TYR O O N N 398 TYR CB C N N 399 TYR CG C Y N 400 TYR CD1 C Y N 401 TYR CD2 C Y N 402 TYR CE1 C Y N 403 TYR CE2 C Y N 404 TYR CZ C Y N 405 TYR OH O N N 406 TYR OXT O N N 407 TYR H H N N 408 TYR H2 H N N 409 TYR HA H N N 410 TYR HB2 H N N 411 TYR HB3 H N N 412 TYR HD1 H N N 413 TYR HD2 H N N 414 TYR HE1 H N N 415 TYR HE2 H N N 416 TYR HH H N N 417 TYR HXT H N N 418 VAL N N N N 419 VAL CA C N S 420 VAL C C N N 421 VAL O O N N 422 VAL CB C N N 423 VAL CG1 C N N 424 VAL CG2 C N N 425 VAL OXT O N N 426 VAL H H N N 427 VAL H2 H N N 428 VAL HA H N N 429 VAL HB H N N 430 VAL HG11 H N N 431 VAL HG12 H N N 432 VAL HG13 H N N 433 VAL HG21 H N N 434 VAL HG22 H N N 435 VAL HG23 H N N 436 VAL HXT H N N 437 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 KPK C16 C20 sing N N 173 KPK C16 C12 sing N N 174 KPK C20 C24 sing N N 175 KPK C12 S8 sing N N 176 KPK C24 O27 doub N N 177 KPK C24 O26 sing N N 178 KPK N7 C3 doub Y N 179 KPK N7 C5 sing Y N 180 KPK S8 C3 sing N N 181 KPK C10 C5 doub Y N 182 KPK C10 C15 sing Y N 183 KPK C3 N1 sing Y N 184 KPK C5 C2 sing Y N 185 KPK C15 C11 doub Y N 186 KPK N1 C2 sing Y N 187 KPK N1 C4 sing N N 188 KPK C2 C6 doub Y N 189 KPK C11 C6 sing Y N 190 KPK C4 C9 sing N N 191 KPK C14 C9 doub Y N 192 KPK C14 S19 sing Y N 193 KPK C9 C13 sing Y N 194 KPK S19 C17 sing Y N 195 KPK C13 C18 sing Y N 196 KPK C13 C17 doub Y N 197 KPK C23 C18 sing N N 198 KPK C18 C22 doub Y N 199 KPK C17 C21 sing Y N 200 KPK C22 C25 sing Y N 201 KPK C21 C25 doub Y N 202 KPK O26 H1 sing N N 203 KPK C20 H2 sing N N 204 KPK C20 H3 sing N N 205 KPK C16 H4 sing N N 206 KPK C16 H5 sing N N 207 KPK C12 H6 sing N N 208 KPK C12 H7 sing N N 209 KPK C10 H8 sing N N 210 KPK C15 H9 sing N N 211 KPK C11 H10 sing N N 212 KPK C6 H11 sing N N 213 KPK C4 H12 sing N N 214 KPK C4 H13 sing N N 215 KPK C14 H14 sing N N 216 KPK C21 H15 sing N N 217 KPK C25 H16 sing N N 218 KPK C22 H17 sing N N 219 KPK C23 H18 sing N N 220 KPK C23 H19 sing N N 221 KPK C23 H20 sing N N 222 LEU N CA sing N N 223 LEU N H sing N N 224 LEU N H2 sing N N 225 LEU CA C sing N N 226 LEU CA CB sing N N 227 LEU CA HA sing N N 228 LEU C O doub N N 229 LEU C OXT sing N N 230 LEU CB CG sing N N 231 LEU CB HB2 sing N N 232 LEU CB HB3 sing N N 233 LEU CG CD1 sing N N 234 LEU CG CD2 sing N N 235 LEU CG HG sing N N 236 LEU CD1 HD11 sing N N 237 LEU CD1 HD12 sing N N 238 LEU CD1 HD13 sing N N 239 LEU CD2 HD21 sing N N 240 LEU CD2 HD22 sing N N 241 LEU CD2 HD23 sing N N 242 LEU OXT HXT sing N N 243 LYS N CA sing N N 244 LYS N H sing N N 245 LYS N H2 sing N N 246 LYS CA C sing N N 247 LYS CA CB sing N N 248 LYS CA HA sing N N 249 LYS C O doub N N 250 LYS C OXT sing N N 251 LYS CB CG sing N N 252 LYS CB HB2 sing N N 253 LYS CB HB3 sing N N 254 LYS CG CD sing N N 255 LYS CG HG2 sing N N 256 LYS CG HG3 sing N N 257 LYS CD CE sing N N 258 LYS CD HD2 sing N N 259 LYS CD HD3 sing N N 260 LYS CE NZ sing N N 261 LYS CE HE2 sing N N 262 LYS CE HE3 sing N N 263 LYS NZ HZ1 sing N N 264 LYS NZ HZ2 sing N N 265 LYS NZ HZ3 sing N N 266 LYS OXT HXT sing N N 267 MET N CA sing N N 268 MET N H sing N N 269 MET N H2 sing N N 270 MET CA C sing N N 271 MET CA CB sing N N 272 MET CA HA sing N N 273 MET C O doub N N 274 MET C OXT sing N N 275 MET CB CG sing N N 276 MET CB HB2 sing N N 277 MET CB HB3 sing N N 278 MET CG SD sing N N 279 MET CG HG2 sing N N 280 MET CG HG3 sing N N 281 MET SD CE sing N N 282 MET CE HE1 sing N N 283 MET CE HE2 sing N N 284 MET CE HE3 sing N N 285 MET OXT HXT sing N N 286 PHE N CA sing N N 287 PHE N H sing N N 288 PHE N H2 sing N N 289 PHE CA C sing N N 290 PHE CA CB sing N N 291 PHE CA HA sing N N 292 PHE C O doub N N 293 PHE C OXT sing N N 294 PHE CB CG sing N N 295 PHE CB HB2 sing N N 296 PHE CB HB3 sing N N 297 PHE CG CD1 doub Y N 298 PHE CG CD2 sing Y N 299 PHE CD1 CE1 sing Y N 300 PHE CD1 HD1 sing N N 301 PHE CD2 CE2 doub Y N 302 PHE CD2 HD2 sing N N 303 PHE CE1 CZ doub Y N 304 PHE CE1 HE1 sing N N 305 PHE CE2 CZ sing Y N 306 PHE CE2 HE2 sing N N 307 PHE CZ HZ sing N N 308 PHE OXT HXT sing N N 309 PRO N CA sing N N 310 PRO N CD sing N N 311 PRO N H sing N N 312 PRO CA C sing N N 313 PRO CA CB sing N N 314 PRO CA HA sing N N 315 PRO C O doub N N 316 PRO C OXT sing N N 317 PRO CB CG sing N N 318 PRO CB HB2 sing N N 319 PRO CB HB3 sing N N 320 PRO CG CD sing N N 321 PRO CG HG2 sing N N 322 PRO CG HG3 sing N N 323 PRO CD HD2 sing N N 324 PRO CD HD3 sing N N 325 PRO OXT HXT sing N N 326 SER N CA sing N N 327 SER N H sing N N 328 SER N H2 sing N N 329 SER CA C sing N N 330 SER CA CB sing N N 331 SER CA HA sing N N 332 SER C O doub N N 333 SER C OXT sing N N 334 SER CB OG sing N N 335 SER CB HB2 sing N N 336 SER CB HB3 sing N N 337 SER OG HG sing N N 338 SER OXT HXT sing N N 339 THR N CA sing N N 340 THR N H sing N N 341 THR N H2 sing N N 342 THR CA C sing N N 343 THR CA CB sing N N 344 THR CA HA sing N N 345 THR C O doub N N 346 THR C OXT sing N N 347 THR CB OG1 sing N N 348 THR CB CG2 sing N N 349 THR CB HB sing N N 350 THR OG1 HG1 sing N N 351 THR CG2 HG21 sing N N 352 THR CG2 HG22 sing N N 353 THR CG2 HG23 sing N N 354 THR OXT HXT sing N N 355 TRP N CA sing N N 356 TRP N H sing N N 357 TRP N H2 sing N N 358 TRP CA C sing N N 359 TRP CA CB sing N N 360 TRP CA HA sing N N 361 TRP C O doub N N 362 TRP C OXT sing N N 363 TRP CB CG sing N N 364 TRP CB HB2 sing N N 365 TRP CB HB3 sing N N 366 TRP CG CD1 doub Y N 367 TRP CG CD2 sing Y N 368 TRP CD1 NE1 sing Y N 369 TRP CD1 HD1 sing N N 370 TRP CD2 CE2 doub Y N 371 TRP CD2 CE3 sing Y N 372 TRP NE1 CE2 sing Y N 373 TRP NE1 HE1 sing N N 374 TRP CE2 CZ2 sing Y N 375 TRP CE3 CZ3 doub Y N 376 TRP CE3 HE3 sing N N 377 TRP CZ2 CH2 doub Y N 378 TRP CZ2 HZ2 sing N N 379 TRP CZ3 CH2 sing Y N 380 TRP CZ3 HZ3 sing N N 381 TRP CH2 HH2 sing N N 382 TRP OXT HXT sing N N 383 TYR N CA sing N N 384 TYR N H sing N N 385 TYR N H2 sing N N 386 TYR CA C sing N N 387 TYR CA CB sing N N 388 TYR CA HA sing N N 389 TYR C O doub N N 390 TYR C OXT sing N N 391 TYR CB CG sing N N 392 TYR CB HB2 sing N N 393 TYR CB HB3 sing N N 394 TYR CG CD1 doub Y N 395 TYR CG CD2 sing Y N 396 TYR CD1 CE1 sing Y N 397 TYR CD1 HD1 sing N N 398 TYR CD2 CE2 doub Y N 399 TYR CD2 HD2 sing N N 400 TYR CE1 CZ doub Y N 401 TYR CE1 HE1 sing N N 402 TYR CE2 CZ sing Y N 403 TYR CE2 HE2 sing N N 404 TYR CZ OH sing N N 405 TYR OH HH sing N N 406 TYR OXT HXT sing N N 407 VAL N CA sing N N 408 VAL N H sing N N 409 VAL N H2 sing N N 410 VAL CA C sing N N 411 VAL CA CB sing N N 412 VAL CA HA sing N N 413 VAL C O doub N N 414 VAL C OXT sing N N 415 VAL CB CG1 sing N N 416 VAL CB CG2 sing N N 417 VAL CB HB sing N N 418 VAL CG1 HG11 sing N N 419 VAL CG1 HG12 sing N N 420 VAL CG1 HG13 sing N N 421 VAL CG2 HG21 sing N N 422 VAL CG2 HG22 sing N N 423 VAL CG2 HG23 sing N N 424 VAL OXT HXT sing N N 425 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '4-({1-[(4-methyl-1-benzothiophen-3-yl)methyl]-1H-benzimidazol-2-yl}sulfanyl)butanoic acid' KPK 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1KLT _pdbx_initial_refinement_model.details 'PDB ENTRY 1KLT' #