HEADER TRANSFERASE/SIGNALING PROTEIN 13-MAY-13 4KP4 TITLE DECIPHERING CIS-TRANS DIRECTIONALITY AND VISUALIZING TITLE 2 AUTOPHOSPHORYLATION IN HISTIDINE KINASES. COMPND MOL_ID: 1; COMPND 2 MOLECULE: OSMOLARITY SENSOR PROTEIN ENVZ, HISTIDINE KINASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SENSOR HISTIDINE KINASE; COMPND 5 EC: 2.7.13.3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI, THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 83333, 243274; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: ENVZ, THEMADRAFT_0449, TM_0853, B3404, JW3367, OMPB, PERA, SOURCE 6 TPO; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FOUR HELIX-BUNDLE, BERGERAT FOLD, KINASE AND PHOSPHOTRANSFERASE, ATP KEYWDS 2 BINDING, TRANSFERASE-SIGNALING PROTEIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR P.CASINO,L.MIGUEL-ROMERO,A.MARINA REVDAT 5 28-FEB-24 4KP4 1 REMARK LINK REVDAT 4 15-NOV-17 4KP4 1 REMARK REVDAT 3 16-AUG-17 4KP4 1 SOURCE REMARK REVDAT 2 19-FEB-14 4KP4 1 JRNL REVDAT 1 12-FEB-14 4KP4 0 JRNL AUTH P.CASINO,L.MIGUEL-ROMERO,A.MARINA JRNL TITL VISUALIZING AUTOPHOSPHORYLATION IN HISTIDINE KINASES. JRNL REF NAT COMMUN V. 5 3258 2014 JRNL REFN ESSN 2041-1723 JRNL PMID 24500224 JRNL DOI 10.1038/NCOMMS4258 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 19482 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1034 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1439 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.25 REMARK 3 BIN R VALUE (WORKING SET) : 0.3180 REMARK 3 BIN FREE R VALUE SET COUNT : 75 REMARK 3 BIN FREE R VALUE : 0.3820 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3366 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 54 REMARK 3 SOLVENT ATOMS : 19 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 106.1 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.38000 REMARK 3 B22 (A**2) : -1.38000 REMARK 3 B33 (A**2) : 4.49000 REMARK 3 B12 (A**2) : -1.38000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.462 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.303 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.237 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 27.484 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3475 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3313 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4716 ; 1.286 ; 1.985 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7612 ; 0.752 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 434 ; 5.619 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 158 ;35.672 ;24.051 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 589 ;18.834 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;19.001 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 530 ; 0.066 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3921 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 760 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1742 ; 4.980 ; 8.680 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1741 ; 4.979 ; 8.680 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2174 ; 7.668 ;13.020 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1733 ; 6.031 ; 9.541 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 231 A 1441 REMARK 3 ORIGIN FOR THE GROUP (A): -40.9013 46.5057 4.6801 REMARK 3 T TENSOR REMARK 3 T11: 0.0811 T22: 0.0621 REMARK 3 T33: 0.3075 T12: -0.0447 REMARK 3 T13: -0.0334 T23: 0.0516 REMARK 3 L TENSOR REMARK 3 L11: 0.8708 L22: 0.0327 REMARK 3 L33: 1.0951 L12: -0.0096 REMARK 3 L13: 0.1525 L23: -0.0701 REMARK 3 S TENSOR REMARK 3 S11: -0.0341 S12: -0.0143 S13: 0.0744 REMARK 3 S21: -0.0221 S22: 0.0390 S23: -0.0170 REMARK 3 S31: -0.0137 S32: 0.0072 S33: -0.0049 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 231 B 1439 REMARK 3 ORIGIN FOR THE GROUP (A): -50.3854 30.1971 -15.9880 REMARK 3 T TENSOR REMARK 3 T11: 0.1045 T22: 0.0483 REMARK 3 T33: 0.2182 T12: -0.0382 REMARK 3 T13: -0.0247 T23: 0.0314 REMARK 3 L TENSOR REMARK 3 L11: 0.2269 L22: 1.8501 REMARK 3 L33: 0.4584 L12: -0.0607 REMARK 3 L13: -0.0970 L23: 0.4942 REMARK 3 S TENSOR REMARK 3 S11: -0.0387 S12: 0.0845 S13: -0.0162 REMARK 3 S21: -0.2697 S22: 0.1122 S23: -0.0099 REMARK 3 S31: -0.0255 S32: -0.0191 S33: -0.0734 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4KP4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JUN-13. REMARK 100 THE DEPOSITION ID IS D_1000079617. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-FEB-13; 12-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : DIAMOND; ESRF REMARK 200 BEAMLINE : I24; ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978900; 0.979080 REMARK 200 MONOCHROMATOR : DOUBLE-CRYSTAL; CHANNEL-CUT REMARK 200 SILICON REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL; PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M; DECTRIS PILATUS REMARK 200 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20516 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 29.580 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 10.60 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : 10.70 REMARK 200 R MERGE FOR SHELL (I) : 0.93900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 74.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2% PEG 1000, 2% PEG 4000, 0.03M SODIUM REMARK 280 ACETATE, HEPES PH 7.5, AMMONIUM SULFATE 1.5M, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 86.72867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 43.36433 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 65.04650 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 21.68217 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 108.41083 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 86.72867 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 43.36433 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 21.68217 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 65.04650 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 108.41083 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -77.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 223 REMARK 465 ALA A 224 REMARK 465 ALA A 225 REMARK 465 GLY A 226 REMARK 465 VAL A 227 REMARK 465 LYS A 228 REMARK 465 GLN A 229 REMARK 465 LEU A 230 REMARK 465 ARG A 1442 REMARK 465 ALA A 1443 REMARK 465 GLN A 1444 REMARK 465 GLY A 1445 REMARK 465 THR A 1446 REMARK 465 THR A 1447 REMARK 465 LYS A 1448 REMARK 465 GLU A 1449 REMARK 465 GLY A 1450 REMARK 465 MET B 223 REMARK 465 ALA B 224 REMARK 465 ALA B 225 REMARK 465 GLY B 226 REMARK 465 VAL B 227 REMARK 465 LYS B 228 REMARK 465 GLN B 229 REMARK 465 LEU B 230 REMARK 465 VAL B 1440 REMARK 465 THR B 1441 REMARK 465 ARG B 1442 REMARK 465 ALA B 1443 REMARK 465 GLN B 1444 REMARK 465 GLY B 1445 REMARK 465 THR B 1446 REMARK 465 THR B 1447 REMARK 465 LYS B 1448 REMARK 465 GLU B 1449 REMARK 465 GLY B 1450 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A1441 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A1392 NE - CZ - NH2 ANGL. DEV. = 4.5 DEGREES REMARK 500 LEU B1266 N - CA - CB ANGL. DEV. = 13.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A1295 109.56 -54.55 REMARK 500 PRO A1364 -53.33 -21.85 REMARK 500 THR A1402 -16.50 -142.24 REMARK 500 PRO B1325 43.25 -86.31 REMARK 500 ASP B1374 43.60 -100.81 REMARK 500 PRO B1380 -19.03 -45.08 REMARK 500 HIS B1385 42.28 -84.63 REMARK 500 ALA B1396 6.55 59.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A1347 OD1 REMARK 620 2 ANP A1501 O2G 130.0 REMARK 620 3 ANP A1501 O2B 106.8 78.3 REMARK 620 4 ANP A1501 O1A 126.5 103.4 77.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ANP A 1501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1502 DBREF 4KP4 A 223 253 UNP P0AEJ4 ENVZ_ECOLI 223 253 DBREF 4KP4 A 271 290 UNP Q9WZV7 Q9WZV7_THEMA 271 290 DBREF 4KP4 A 1266 1450 UNP P0AEJ4 ENVZ_ECOLI 266 450 DBREF 4KP4 B 223 253 UNP P0AEJ4 ENVZ_ECOLI 223 253 DBREF 4KP4 B 271 290 UNP Q9WZV7 Q9WZV7_THEMA 271 290 DBREF 4KP4 B 1266 1450 UNP P0AEJ4 ENVZ_ECOLI 266 450 SEQRES 1 A 236 MET ALA ALA GLY VAL LYS GLN LEU ALA ASP ASP ARG THR SEQRES 2 A 236 LEU LEU MET ALA GLY VAL SER HIS ASP LEU ARG THR PRO SEQRES 3 A 236 LEU THR ARG ILE ARG ALA TYR ALA GLU THR ILE TYR ASN SEQRES 4 A 236 SER LEU GLY GLU LEU ASP LEU SER THR LEU LYS GLU LEU SEQRES 5 A 236 ALA GLU SER ILE ASN LYS ASP ILE GLU GLU CYS ASN ALA SEQRES 6 A 236 ILE ILE GLU GLN PHE ILE ASP TYR LEU ARG THR GLY GLN SEQRES 7 A 236 GLU MET PRO MET GLU MET ALA ASP LEU ASN ALA VAL LEU SEQRES 8 A 236 GLY GLU VAL ILE ALA ALA GLU SER GLY TYR GLU ARG GLU SEQRES 9 A 236 ILE GLU THR ALA LEU TYR PRO GLY SER ILE GLU VAL LYS SEQRES 10 A 236 MET HIS PRO LEU SER ILE LYS ARG ALA VAL ALA ASN MET SEQRES 11 A 236 VAL VAL ASN ALA ALA ARG TYR GLY ASN GLY TRP ILE LYS SEQRES 12 A 236 VAL SER SER GLY THR GLU PRO ASN ARG ALA TRP PHE GLN SEQRES 13 A 236 VAL GLU ASP ASP GLY PRO GLY ILE ALA PRO GLU GLN ARG SEQRES 14 A 236 LYS HIS LEU PHE GLN PRO PHE VAL ARG GLY ASP SER ALA SEQRES 15 A 236 ARG THR ILE SER GLY THR GLY LEU GLY LEU ALA ILE VAL SEQRES 16 A 236 GLN ARG ILE VAL ASP ASN HIS ASN GLY MET LEU GLU LEU SEQRES 17 A 236 GLY THR SER GLU ARG GLY GLY LEU SER ILE ARG ALA TRP SEQRES 18 A 236 LEU PRO VAL PRO VAL THR ARG ALA GLN GLY THR THR LYS SEQRES 19 A 236 GLU GLY SEQRES 1 B 236 MET ALA ALA GLY VAL LYS GLN LEU ALA ASP ASP ARG THR SEQRES 2 B 236 LEU LEU MET ALA GLY VAL SER HIS ASP LEU ARG THR PRO SEQRES 3 B 236 LEU THR ARG ILE ARG ALA TYR ALA GLU THR ILE TYR ASN SEQRES 4 B 236 SER LEU GLY GLU LEU ASP LEU SER THR LEU LYS GLU LEU SEQRES 5 B 236 ALA GLU SER ILE ASN LYS ASP ILE GLU GLU CYS ASN ALA SEQRES 6 B 236 ILE ILE GLU GLN PHE ILE ASP TYR LEU ARG THR GLY GLN SEQRES 7 B 236 GLU MET PRO MET GLU MET ALA ASP LEU ASN ALA VAL LEU SEQRES 8 B 236 GLY GLU VAL ILE ALA ALA GLU SER GLY TYR GLU ARG GLU SEQRES 9 B 236 ILE GLU THR ALA LEU TYR PRO GLY SER ILE GLU VAL LYS SEQRES 10 B 236 MET HIS PRO LEU SER ILE LYS ARG ALA VAL ALA ASN MET SEQRES 11 B 236 VAL VAL ASN ALA ALA ARG TYR GLY ASN GLY TRP ILE LYS SEQRES 12 B 236 VAL SER SER GLY THR GLU PRO ASN ARG ALA TRP PHE GLN SEQRES 13 B 236 VAL GLU ASP ASP GLY PRO GLY ILE ALA PRO GLU GLN ARG SEQRES 14 B 236 LYS HIS LEU PHE GLN PRO PHE VAL ARG GLY ASP SER ALA SEQRES 15 B 236 ARG THR ILE SER GLY THR GLY LEU GLY LEU ALA ILE VAL SEQRES 16 B 236 GLN ARG ILE VAL ASP ASN HIS ASN GLY MET LEU GLU LEU SEQRES 17 B 236 GLY THR SER GLU ARG GLY GLY LEU SER ILE ARG ALA TRP SEQRES 18 B 236 LEU PRO VAL PRO VAL THR ARG ALA GLN GLY THR THR LYS SEQRES 19 B 236 GLU GLY HET ANP A1501 31 HET MG A1502 1 HET SO4 A1503 5 HET PEG A1504 7 HET SO4 B1501 5 HET SO4 B1502 5 HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER HETNAM MG MAGNESIUM ION HETNAM SO4 SULFATE ION HETNAM PEG DI(HYDROXYETHYL)ETHER FORMUL 3 ANP C10 H17 N6 O12 P3 FORMUL 4 MG MG 2+ FORMUL 5 SO4 3(O4 S 2-) FORMUL 6 PEG C4 H10 O3 FORMUL 9 HOH *19(H2 O) HELIX 1 1 ALA A 231 LEU A 280 1 33 HELIX 2 2 ASP A 284 GLY A 1291 1 33 HELIX 3 3 LEU A 1301 SER A 1313 1 13 HELIX 4 4 HIS A 1333 GLY A 1352 1 20 HELIX 5 5 ALA A 1379 GLU A 1381 5 3 HELIX 6 6 GLN A 1382 PHE A 1387 1 6 HELIX 7 7 GLY A 1393 THR A 1398 1 6 HELIX 8 8 LEU A 1404 ASN A 1415 1 12 HELIX 9 9 ASP B 232 LEU B 245 1 14 HELIX 10 10 LEU B 245 SER B 279 1 18 HELIX 11 11 ASP B 284 GLY B 1291 1 33 HELIX 12 12 LEU B 1301 GLU B 1312 1 12 HELIX 13 13 HIS B 1333 GLY B 1352 1 20 HELIX 14 14 ARG B 1383 PHE B 1387 5 5 HELIX 15 15 SER B 1400 HIS B 1416 1 17 SHEET 1 A 2 GLU A1297 ASP A1300 0 SHEET 2 A 2 GLU A1329 MET A1332 -1 O MET A1332 N GLU A1297 SHEET 1 B 5 GLU A1320 ALA A1322 0 SHEET 2 B 5 ILE A1356 GLU A1363 1 O ILE A1356 N GLU A1320 SHEET 3 B 5 ARG A1366 ASP A1373 -1 O ARG A1366 N GLU A1363 SHEET 4 B 5 LEU A1430 PRO A1437 -1 O LEU A1436 N ALA A1367 SHEET 5 B 5 MET A1419 THR A1424 -1 N MET A1419 O TRP A1435 SHEET 1 C 2 GLU B1297 ASP B1300 0 SHEET 2 C 2 GLU B1329 MET B1332 -1 O MET B1332 N GLU B1297 SHEET 1 D 5 GLU B1318 ALA B1322 0 SHEET 2 D 5 TRP B1355 THR B1362 1 O ILE B1356 N GLU B1320 SHEET 3 D 5 ARG B1366 ASP B1373 -1 O GLN B1370 N SER B1359 SHEET 4 D 5 LEU B1430 PRO B1437 -1 O ALA B1434 N PHE B1369 SHEET 5 D 5 MET B1419 THR B1424 -1 N GLY B1423 O SER B1431 LINK OD1 ASN A1347 MG MG A1502 1555 1555 1.93 LINK O2G ANP A1501 MG MG A1502 1555 1555 2.43 LINK O2B ANP A1501 MG MG A1502 1555 1555 2.36 LINK O1A ANP A1501 MG MG A1502 1555 1555 2.61 SITE 1 AC1 18 HIS A 243 ASN A1347 ARG A1350 TYR A1351 SITE 2 AC1 18 ASP A1373 GLY A1377 ILE A1378 ARG A1392 SITE 3 AC1 18 GLY A1393 ALA A1396 GLY A1401 THR A1402 SITE 4 AC1 18 GLY A1403 LEU A1404 GLY A1405 LEU A1406 SITE 5 AC1 18 LEU A1430 MG A1502 SITE 1 AC2 3 ASN A1347 ARG A1350 ANP A1501 SITE 1 AC3 3 ARG A1383 GLY A1423 THR A1424 SITE 1 AC4 4 ARG A1366 MET A1419 GLY B1326 SER B1327 SITE 1 AC5 7 ARG B1350 ILE B1399 SER B1400 GLY B1401 SITE 2 AC5 7 THR B1402 HOH B1602 HOH B1603 CRYST1 163.686 163.686 130.093 90.00 90.00 120.00 P 65 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006109 0.003527 0.000000 0.00000 SCALE2 0.000000 0.007054 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007687 0.00000