HEADER HYDROLASE 13-MAY-13 4KP9 OBSLTE 12-SEP-18 4KP9 6H8T TITLE CRYSTAL STRUCTURE OF PAPAIN MODIFY BY ACHIRAL RU(II)COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: PAPAIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PAPAYA PROTEINASE I, PPI; COMPND 5 EC: 3.4.22.2; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: PAPAIN; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: PAPAYA PROTEINASE I, PPI; COMPND 10 EC: 3.4.22.2 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CARICA PAPAYA; SOURCE 3 ORGANISM_COMMON: MAMON; SOURCE 4 ORGANISM_TAXID: 3649; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: CARICA PAPAYA; SOURCE 7 ORGANISM_COMMON: MAMON; SOURCE 8 ORGANISM_TAXID: 3649 KEYWDS ARTIFICIAL METALLOENZYME, HYDROLASE, ACHIRAL RU(II) COMPLEX, KEYWDS 2 HYDROXYLATIONS EXPDTA X-RAY DIFFRACTION AUTHOR M.V.CHERRIER,N.MADERN,P.AMARA,M.SALMAIN,J.C.FONTECILLA-CAMPS REVDAT 2 12-SEP-18 4KP9 1 OBSLTE REVDAT 1 25-JUN-14 4KP9 0 JRNL AUTH M.V.CHERRIER,N.MADERN,P.AMARA,M.SALMAIN,J.C.FONTECILLA-CAMPS JRNL TITL X-RAY STRUCTURAL EVIDENCE FOR UNUSUAL RADICAL OH-BASED JRNL TITL 2 TYROSINE HYDROXYLATIONS IN AN ACHIRAL RU(II)-PAPAIN COMPLEX JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6.4_486 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.43 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 23644 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1181 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.4309 - 4.1987 1.00 2972 155 0.2159 0.2375 REMARK 3 2 4.1987 - 3.3333 1.00 2835 149 0.1689 0.2156 REMARK 3 3 3.3333 - 2.9122 1.00 2808 148 0.1835 0.2529 REMARK 3 4 2.9122 - 2.6460 1.00 2788 146 0.2014 0.2823 REMARK 3 5 2.6460 - 2.4564 1.00 2778 147 0.2050 0.2732 REMARK 3 6 2.4564 - 2.3116 1.00 2775 146 0.1848 0.2753 REMARK 3 7 2.3116 - 2.1958 1.00 2735 144 0.1919 0.2490 REMARK 3 8 2.1958 - 2.1002 1.00 2772 146 0.2069 0.2945 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.37 REMARK 3 B_SOL : 59.06 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.420 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.44 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.98890 REMARK 3 B22 (A**2) : -5.84550 REMARK 3 B33 (A**2) : 11.83440 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 3563 REMARK 3 ANGLE : 1.030 4833 REMARK 3 CHIRALITY : 0.070 479 REMARK 3 PLANARITY : 0.005 637 REMARK 3 DIHEDRAL : 16.157 1325 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4KP9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000079622. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-NOV-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8726 REMARK 200 MONOCHROMATOR : SILICON 111 CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23677 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 37.425 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.10400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.8100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.34300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.240 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1PPP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 35% PEG400, 50MM SODIUM ACETATE, 100MM REMARK 280 LITHIUM SULFATE, PH 4.7, VAPOR DIFFUSION, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.51500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.12500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.42500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 43.12500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.51500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.42500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU B 183 O HOH A 488 3444 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 158 4.08 -153.34 REMARK 500 TYR B 78 -74.02 -118.94 REMARK 500 THR B 107 -169.72 -101.38 REMARK 500 GLN B 128 166.27 179.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 THE MODIFIED PART OF 25TH CYS IN CHAIN A (BU1) IS THE RESULT OF THE REMARK 600 DEGRADATION OF THE SAME MODIFIED PART AS 25TH CYS IN CHAIN B (YXX). REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BU1 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE YXZ A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE YXX B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 309 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1PPP RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THESE RESIDUES HAVE BEEN CONFIRMED BY UNP DATABASE (P00784), REMARK 999 REFERENCE 2. DBREF 4KP9 A 1 212 UNP P00784 PAPA1_CARPA 134 345 DBREF 4KP9 B 1 212 UNP P00784 PAPA1_CARPA 134 345 SEQADV 4KP9 GLN A 47 UNP P00784 GLU 180 SEE REMARK 999 SEQADV 4KP9 TXY A 67 UNP P00784 TYR 200 MICROHETEROGENEITY SEQADV 4KP9 GLN A 118 UNP P00784 GLU 251 SEE REMARK 999 SEQADV 4KP9 GLN A 135 UNP P00784 GLU 268 SEE REMARK 999 SEQADV 4KP9 GLN B 47 UNP P00784 GLU 180 SEE REMARK 999 SEQADV 4KP9 GLN B 118 UNP P00784 GLU 251 SEE REMARK 999 SEQADV 4KP9 GLN B 135 UNP P00784 GLU 268 SEE REMARK 999 SEQRES 1 A 212 ILE PRO GLU TYR VAL ASP TRP ARG GLN LYS GLY ALA VAL SEQRES 2 A 212 THR PRO VAL LYS ASN GLN GLY SER CYS GLY SER CYS TRP SEQRES 3 A 212 ALA PHE SER ALA VAL VAL THR ILE GLU GLY ILE ILE LYS SEQRES 4 A 212 ILE ARG THR GLY ASN LEU ASN GLN TYR SER GLU GLN GLU SEQRES 5 A 212 LEU LEU ASP CYS ASP ARG ARG SER OMX GLY CYS ASN GLY SEQRES 6 A 212 GLY TXY PRO TRP SER ALA LEU GLN LEU VAL ALA GLN TYR SEQRES 7 A 212 GLY ILE HIS TYR ARG ASN THR TYR PRO TYR GLU GLY VAL SEQRES 8 A 212 GLN ARG TYR CYS ARG SER ARG GLU LYS GLY PRO TYR ALA SEQRES 9 A 212 ALA LYS THR ASP GLY VAL ARG GLN VAL GLN PRO TYR ASN SEQRES 10 A 212 GLN GLY ALA LEU LEU TYR SER ILE ALA ASN GLN PRO VAL SEQRES 11 A 212 SER VAL VAL LEU GLN ALA ALA GLY LYS ASP PHE GLN LEU SEQRES 12 A 212 TYR ARG GLY GLY ILE PHE VAL GLY PRO CYS GLY ASN LYS SEQRES 13 A 212 VAL ASP HIS ALA VAL ALA ALA VAL GLY TYR GLY PRO ASN SEQRES 14 A 212 TYR ILE LEU ILE LYS ASN SER TRP GLY THR GLY TRP GLY SEQRES 15 A 212 GLU ASN GLY TYR ILE ARG ILE LYS ARG GLY THR GLY ASN SEQRES 16 A 212 SER TYR GLY VAL CYS GLY LEU TYR THR SER SER PHE TYR SEQRES 17 A 212 PRO VAL LYS ASN SEQRES 1 B 212 ILE PRO GLU TYR VAL ASP TRP ARG GLN LYS GLY ALA VAL SEQRES 2 B 212 THR PRO VAL LYS ASN GLN GLY SER CYS GLY SER CYS TRP SEQRES 3 B 212 ALA PHE SER ALA VAL VAL THR ILE GLU GLY ILE ILE LYS SEQRES 4 B 212 ILE ARG THR GLY ASN LEU ASN GLN TYR SER GLU GLN GLU SEQRES 5 B 212 LEU LEU ASP CYS ASP ARG ARG SER TYR GLY CYS ASN GLY SEQRES 6 B 212 GLY TYR PRO TRP SER ALA LEU GLN LEU VAL ALA GLN TYR SEQRES 7 B 212 GLY ILE HIS TYR ARG ASN THR TYR PRO TYR GLU GLY VAL SEQRES 8 B 212 GLN ARG TYR CYS ARG SER ARG GLU LYS GLY PRO TYR ALA SEQRES 9 B 212 ALA LYS THR ASP GLY VAL ARG GLN VAL GLN PRO TYR ASN SEQRES 10 B 212 GLN GLY ALA LEU LEU TYR SER ILE ALA ASN GLN PRO VAL SEQRES 11 B 212 SER VAL VAL LEU GLN ALA ALA GLY LYS ASP PHE GLN LEU SEQRES 12 B 212 TYR ARG GLY GLY ILE PHE VAL GLY PRO CYS GLY ASN LYS SEQRES 13 B 212 VAL ASP HIS ALA VAL ALA ALA VAL GLY TYR GLY PRO ASN SEQRES 14 B 212 TYR ILE LEU ILE LYS ASN SER TRP GLY THR GLY TRP GLY SEQRES 15 B 212 GLU ASN GLY TYR ILE ARG ILE LYS ARG GLY THR GLY ASN SEQRES 16 B 212 SER TYR GLY VAL CYS GLY LEU TYR THR SER SER PHE TYR SEQRES 17 B 212 PRO VAL LYS ASN MODRES 4KP9 OMX A 61 TYR (BETAR)-BETA-HYDROXY-L-TYROSINE MODRES 4KP9 TXY A 67 TYR HET OMX A 61 13 HET TXY A 67 13 HET BU1 A 301 6 HET CL A 302 1 HET ACT A 303 4 HET ACT A 304 4 HET YXZ A 305 21 HET ACT A 306 4 HET YXX B 301 27 HET SO4 B 302 5 HET ACT B 303 4 HET ACT B 304 4 HET ACT B 305 4 HET ACT B 306 4 HET ACT B 307 4 HET ACT B 308 4 HET NA B 309 1 HETNAM OMX (BETAR)-BETA-HYDROXY-L-TYROSINE HETNAM TXY 3-[(5S)-4,5-DIHYDROXYCYCLOHEXA-1,3-DIEN-1-YL]-L-ALANINE HETNAM BU1 1,4-BUTANEDIOL HETNAM CL CHLORIDE ION HETNAM ACT ACETATE ION HETNAM YXZ CHLORO[N,N-DI(PYRIDIN-2-YL-KAPPAN)PENTANE-1,5- HETNAM 2 YXZ DIAMINE]RUTHENIUM HETNAM YXX CHLORO(1-{5-[DI(PYRIDIN-2-YL-KAPPAN) HETNAM 2 YXX AMINO]PENTYL}PYRROLIDINE-2,5-DIONE)RUTHENIUM HETNAM SO4 SULFATE ION HETNAM NA SODIUM ION FORMUL 1 OMX C9 H11 N O4 FORMUL 1 TXY C9 H13 N O4 FORMUL 3 BU1 C4 H10 O2 FORMUL 4 CL CL 1- FORMUL 5 ACT 9(C2 H3 O2 1-) FORMUL 7 YXZ C15 H20 CL N4 RU FORMUL 9 YXX C19 H22 CL N4 O2 RU FORMUL 10 SO4 O4 S 2- FORMUL 17 NA NA 1+ FORMUL 18 HOH *338(H2 O) HELIX 1 1 SER A 24 GLY A 43 1 20 HELIX 2 2 SER A 49 ASP A 57 1 9 HELIX 3 3 OMX A 61 GLY A 65 5 5 HELIX 4 5 ARG A 96 GLY A 101 5 6 HELIX 5 6 ASN A 117 GLN A 128 1 12 HELIX 6 7 GLY A 138 TYR A 144 1 7 HELIX 7 8 GLY A 198 LEU A 202 5 5 HELIX 8 9 ARG B 8 GLY B 11 5 4 HELIX 9 10 SER B 24 GLY B 43 1 20 HELIX 10 11 SER B 49 ASP B 57 1 9 HELIX 11 12 TYR B 61 GLY B 65 5 5 HELIX 12 13 TYR B 67 TYR B 78 1 12 HELIX 13 14 TYR B 82 TYR B 86 5 5 HELIX 14 15 ARG B 96 GLY B 101 5 6 HELIX 15 16 ASN B 117 ALA B 126 1 10 HELIX 16 17 GLY B 138 TYR B 144 1 7 HELIX 17 18 GLY B 198 LEU B 202 5 5 SHEET 1 A 3 VAL A 5 ASP A 6 0 SHEET 2 A 3 HIS A 159 GLY A 167 -1 O TYR A 166 N VAL A 5 SHEET 3 A 3 VAL A 130 LEU A 134 -1 N VAL A 132 O VAL A 161 SHEET 1 B 5 VAL A 5 ASP A 6 0 SHEET 2 B 5 HIS A 159 GLY A 167 -1 O TYR A 166 N VAL A 5 SHEET 3 B 5 TYR A 170 LYS A 174 -1 O LYS A 174 N ALA A 162 SHEET 4 B 5 TYR A 186 LYS A 190 -1 O ILE A 189 N ILE A 171 SHEET 5 B 5 ILE A 148 PHE A 149 1 N PHE A 149 O ARG A 188 SHEET 1 C 2 GLY A 109 GLN A 112 0 SHEET 2 C 2 PHE A 207 VAL A 210 -1 O TYR A 208 N ARG A 111 SHEET 1 D 3 VAL B 5 ASP B 6 0 SHEET 2 D 3 HIS B 159 GLY B 167 -1 O TYR B 166 N VAL B 5 SHEET 3 D 3 VAL B 130 LEU B 134 -1 N VAL B 130 O ALA B 163 SHEET 1 E 5 VAL B 5 ASP B 6 0 SHEET 2 E 5 HIS B 159 GLY B 167 -1 O TYR B 166 N VAL B 5 SHEET 3 E 5 TYR B 170 LYS B 174 -1 O LYS B 174 N ALA B 162 SHEET 4 E 5 TYR B 186 LYS B 190 -1 O ILE B 187 N ILE B 173 SHEET 5 E 5 ILE B 148 PHE B 149 1 N PHE B 149 O ARG B 188 SHEET 1 F 2 GLY B 109 VAL B 113 0 SHEET 2 F 2 SER B 206 VAL B 210 -1 O SER B 206 N VAL B 113 SSBOND 1 CYS A 22 CYS A 63 1555 1555 2.05 SSBOND 2 CYS A 56 CYS A 95 1555 1555 2.06 SSBOND 3 CYS A 153 CYS A 200 1555 1555 2.05 SSBOND 4 CYS B 22 CYS B 63 1555 1555 2.04 SSBOND 5 CYS B 56 CYS B 95 1555 1555 2.05 SSBOND 6 CYS B 153 CYS B 200 1555 1555 2.06 LINK SG CYS A 25 C2 BU1 A 301 1555 1555 1.89 LINK C SER A 60 N OMX A 61 1555 1555 1.33 LINK C OMX A 61 N GLY A 62 1555 1555 1.33 LINK SG CYS B 25 CBD YXX B 301 1555 1555 1.90 LINK C GLY A 66 N ATXY A 67 1555 1555 1.33 LINK C ATXY A 67 N PRO A 68 1555 1555 1.34 CISPEP 1 GLY A 151 PRO A 152 0 2.02 CISPEP 2 GLY B 151 PRO B 152 0 0.00 SITE 1 AC1 7 GLN A 19 GLY A 23 SER A 24 CYS A 25 SITE 2 AC1 7 ASP A 158 HIS A 159 YXZ A 305 SITE 1 AC2 4 ARG A 93 TYR A 94 ASN A 169 LYS A 190 SITE 1 AC3 3 ASN A 18 GLY A 20 HOH A 508 SITE 1 AC4 4 TXY A 67 VAL A 157 HOH A 513 HOH A 561 SITE 1 AC5 8 OMX A 61 GLY A 65 GLY A 66 TXY A 67 SITE 2 AC5 8 BU1 A 301 PRO B 115 TYR B 116 NA B 309 SITE 1 AC6 3 TYR A 82 ASN A 84 HOH A 552 SITE 1 AC7 11 PRO A 115 TYR A 116 CYS B 25 TRP B 26 SITE 2 AC7 11 TYR B 61 GLY B 65 GLY B 66 TYR B 67 SITE 3 AC7 11 ASP B 158 ACT B 308 HOH B 517 SITE 1 AC8 8 GLN A 73 GLY A 109 VAL A 110 ARG A 111 SITE 2 AC8 8 GLY B 109 VAL B 110 ARG B 111 HOH B 545 SITE 1 AC9 2 TYR B 197 NA B 309 SITE 1 BC1 4 VAL B 157 HOH B 488 HOH B 497 HOH B 558 SITE 1 BC2 6 ALA A 137 GLY A 138 LYS A 139 TYR B 103 SITE 2 BC2 6 ALA B 104 HOH B 459 SITE 1 BC3 1 HOH B 560 SITE 1 BC4 2 ARG B 145 HOH B 561 SITE 1 BC5 6 ARG B 8 TYR B 61 GLU B 183 ARG B 188 SITE 2 BC5 6 YXX B 301 HOH B 454 SITE 1 BC6 2 YXZ A 305 ACT B 303 CRYST1 61.030 74.850 86.250 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016385 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013360 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011594 0.00000