HEADER FLUORESCENT PROTEIN 13-MAY-13 4KPI TITLE ROTATIONAL ORDER-DISORDER STRUCTURE OF REVERSIBLY PHOTOSWITCHABLE RED TITLE 2 FLUORESCENT PROTEIN RSTAGRFP COMPND MOL_ID: 1; COMPND 2 MOLECULE: REVERSIBLY PHOTOSWITCHABLE RED FLUORESCENT PROTEIN COMPND 3 RSTAGRFP; COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: XL1 BLUE; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PQE30 KEYWDS BETA-BARREL, ORDER-DISORDER STRUCTURE, RED FLUORESCENT PROTEIN, KEYWDS 2 REVERSIBLY PHOTOSWITCHABLE FLUORESCENT PROTEIN, FLUORESCENT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.PLETNEV REVDAT 4 06-DEC-23 4KPI 1 REMARK REVDAT 3 20-SEP-23 4KPI 1 LINK REVDAT 2 15-NOV-17 4KPI 1 REMARK REVDAT 1 26-FEB-14 4KPI 0 JRNL AUTH S.PLETNEV,F.V.SUBACH,V.V.VERKHUSHA,Z.DAUTER JRNL TITL THE ROTATIONAL ORDER-DISORDER STRUCTURE OF THE REVERSIBLY JRNL TITL 2 PHOTOSWITCHABLE RED FLUORESCENT PROTEIN RSTAGRFP. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 70 31 2014 JRNL REFN ISSN 0907-4449 JRNL PMID 24419376 JRNL DOI 10.1107/S1399004713024644 REMARK 2 REMARK 2 RESOLUTION. 1.58 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1090 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.58 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.31 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 88.4 REMARK 3 NUMBER OF REFLECTIONS : 14283 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.279 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 711 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.3184 - 2.7019 1.00 3213 155 0.2433 0.2789 REMARK 3 2 2.7019 - 2.1448 1.00 3055 154 0.2309 0.2768 REMARK 3 3 2.1448 - 1.8737 0.99 3024 155 0.1878 0.2750 REMARK 3 4 1.8737 - 1.7024 0.97 2907 170 0.2057 0.3020 REMARK 3 5 1.7024 - 1.5804 0.46 1373 77 0.1936 0.2376 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.710 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 1830 REMARK 3 ANGLE : 1.789 2473 REMARK 3 CHIRALITY : 0.083 260 REMARK 3 PLANARITY : 0.008 320 REMARK 3 DIHEDRAL : 15.918 684 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE CRYSTAL WITH ROTATIONAL ORDER REMARK 3 -DISORDER PATHOLOGY IS COMPOSED OF TETRAMERS WITH 222 SYMMETRY REMARK 3 INCORPORATED INTO THE LATTICE IN TWO DIFFERENT WAYS, ROTATED 90 REMARK 3 DEGREES WITH RESPECT TO EACH OTHER AROUND THE CRYSTAL C-AXIS, REMARK 3 WITH TETRAMER AXES COINCIDENT WITH CRYSTALLOGRAPHIC 2-FOLD AXES. REMARK 3 THE RANDOM DISTRIBUTION OF ALTERNATIVELY ORIENTED TETRAMERS IN REMARK 3 THE CRYSTAL CREATES THE ROTATIONAL ORDER-DISORDER STRUCTURE WITH REMARK 3 STATISTICALLY AVERAGED I422 SYMMETRY IN WHICH ONE TETRAMER REMARK 3 OVERLAPS WITH 90 DEGREE ROTATED TETRAMER IN THE SAME PHYSICAL REMARK 3 SPACE. REMARK 4 REMARK 4 4KPI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000079631. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15284 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.580 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.4 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.04600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.58 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 62.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.59600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3U8A REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM NITRATE 20% PEG 3350, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 46.34850 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 46.34850 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 26.56050 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 46.34850 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 46.34850 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 26.56050 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 46.34850 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 46.34850 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 26.56050 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 46.34850 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 46.34850 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 26.56050 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 46.34850 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 46.34850 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 26.56050 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 46.34850 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 46.34850 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 26.56050 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 46.34850 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 46.34850 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 26.56050 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 46.34850 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 46.34850 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 26.56050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 344 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 346 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 347 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 373 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -11 REMARK 465 ARG A -10 REMARK 465 GLY A -9 REMARK 465 SER A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLY A 229 REMARK 465 HIS A 230 REMARK 465 LYS A 231 REMARK 465 LEU A 232 REMARK 465 ASN A 233 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG CYS A 222 O HOH A 357 1.35 REMARK 500 H GLY A 166 O HOH A 319 1.38 REMARK 500 H THR A 38 O HOH A 353 1.52 REMARK 500 OG1 THR A 177 O HOH A 345 1.99 REMARK 500 OG1 THR A 38 O HOH A 353 2.00 REMARK 500 O PHE A 79 O HOH A 354 2.02 REMARK 500 ND2 ASN A 182 O HOH A 358 2.03 REMARK 500 O HOH A 365 O HOH A 370 2.04 REMARK 500 O THR A 38 O HOH A 353 2.05 REMARK 500 N THR A 177 O HOH A 345 2.07 REMARK 500 O PRO A 127 O HOH A 351 2.10 REMARK 500 NH2 ARG A 122 O HOH A 306 2.12 REMARK 500 N GLN A 82 O HOH A 354 2.14 REMARK 500 N GLY A 130 O HOH A 360 2.14 REMARK 500 O HOH A 327 O HOH A 366 2.17 REMARK 500 O HOH A 314 O HOH A 351 2.17 REMARK 500 N THR A 38 O HOH A 353 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASN A 125 O HOH A 316 3555 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 190 C - N - CA ANGL. DEV. = 9.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 21 -15.39 87.46 REMARK 500 PHE A 69 48.45 -104.78 REMARK 500 ALA A 184 -65.22 -28.65 REMARK 500 PRO A 190 -166.07 -109.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3U8A RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MONOMERIC REVERSIBLY PHOTOSWITCHABLE RED REMARK 900 FLUORESCENT PROTEIN RSTAGRFP IN THE OFF STATE REMARK 900 RELATED ID: 3U8C RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MONOMERIC REVERSIBLY PHOTOSWITCHABLE RED REMARK 900 FLUORESCENT PROTEIN RSTAGRFP IN THE ON STATE DBREF 4KPI A -11 233 PDB 4KPI 4KPI -11 233 SEQRES 1 A 243 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER MET SEQRES 2 A 243 SER GLU LEU ILE LYS GLU ASN MET HIS MET LYS LEU TYR SEQRES 3 A 243 MET GLU GLY THR VAL ASN ASN HIS HIS PHE LYS CYS THR SEQRES 4 A 243 SER GLU GLY GLU GLY LYS PRO TYR GLU GLY THR GLN THR SEQRES 5 A 243 MET ARG ILE LYS VAL VAL GLU GLY GLY PRO LEU PRO PHE SEQRES 6 A 243 ALA PHE ASP ILE LEU ALA THR SER PHE NRQ SER ARG THR SEQRES 7 A 243 PHE ILE ASN HIS THR GLN GLY ILE PRO ASP PHE TRP LYS SEQRES 8 A 243 GLN SER PHE PRO GLU GLY PHE THR TRP GLU ARG VAL THR SEQRES 9 A 243 THR TYR GLU ASP GLY GLY VAL LEU THR ALA THR GLN ASP SEQRES 10 A 243 THR SER LEU GLN ASP GLY CYS LEU ILE TYR ASN VAL LYS SEQRES 11 A 243 ILE ARG GLY VAL ASN PHE PRO SER ASN GLY PRO VAL MET SEQRES 12 A 243 GLN LYS LYS THR LEU GLY TRP GLU ALA ALA THR GLU MET SEQRES 13 A 243 LEU TYR PRO ALA ASP GLY GLY LEU GLU GLY ARG GLY ASP SEQRES 14 A 243 MET ALA LEU LYS LEU VAL GLY GLY GLY HIS LEU ILE CYS SEQRES 15 A 243 ASN LEU LYS THR THR TYR ARG SER LYS ASN PRO ALA LYS SEQRES 16 A 243 ASN LEU LYS MET PRO GLY VAL TYR PHE VAL ASP HIS ARG SEQRES 17 A 243 LEU GLU ARG ILE LYS GLU ALA ASP LYS GLU THR TYR VAL SEQRES 18 A 243 GLU GLN HIS GLU VAL ALA VAL ALA ARG TYR CYS ASP LEU SEQRES 19 A 243 PRO SER LYS LEU GLY HIS LYS LEU ASN MODRES 4KPI NRQ A 63 MET MODRES 4KPI NRQ A 63 TYR MODRES 4KPI NRQ A 63 GLY HET NRQ A 63 23 HETNAM NRQ {(4Z)-4-(4-HYDROXYBENZYLIDENE)-2-[3-(METHYLTHIO) HETNAM 2 NRQ PROPANIMIDOYL]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1- HETNAM 3 NRQ YL}ACETIC ACID HETSYN NRQ CHROMOPHORE (MET-TYR-GLY) FORMUL 1 NRQ C16 H17 N3 O4 S FORMUL 2 HOH *76(H2 O) HELIX 1 1 ALA A 54 PHE A 62 5 9 HELIX 2 2 SER A 66 ILE A 70 5 5 HELIX 3 3 TRP A 80 PHE A 84 5 5 HELIX 4 4 PRO A 183 LEU A 187 5 5 SHEET 1 A11 ASN A 71 HIS A 72 0 SHEET 2 A11 TYR A 210 ARG A 220 1 O ALA A 217 N ASN A 71 SHEET 3 A11 THR A 38 GLU A 47 -1 N ILE A 43 O VAL A 211 SHEET 4 A11 HIS A 22 LYS A 33 -1 N GLU A 31 O THR A 40 SHEET 5 A11 MET A 9 VAL A 19 -1 N VAL A 19 O HIS A 22 SHEET 6 A11 CYS A 114 VAL A 124 1 O LEU A 115 N LYS A 12 SHEET 7 A11 VAL A 101 GLN A 111 -1 N THR A 103 O ARG A 122 SHEET 8 A11 PHE A 88 TYR A 96 -1 N PHE A 88 O THR A 108 SHEET 9 A11 HIS A 169 SER A 180 -1 O ARG A 179 N THR A 89 SHEET 10 A11 GLY A 153 LEU A 164 -1 N LEU A 154 O TYR A 178 SHEET 11 A11 THR A 137 TRP A 140 -1 N GLY A 139 O LYS A 163 SHEET 1 B 6 ASN A 71 HIS A 72 0 SHEET 2 B 6 TYR A 210 ARG A 220 1 O ALA A 217 N ASN A 71 SHEET 3 B 6 TYR A 193 ALA A 205 -1 N LYS A 203 O GLU A 212 SHEET 4 B 6 ALA A 143 ALA A 150 -1 N LEU A 147 O TYR A 193 SHEET 5 B 6 GLY A 153 LEU A 164 -1 O GLU A 155 N TYR A 148 SHEET 6 B 6 THR A 137 TRP A 140 -1 N GLY A 139 O LYS A 163 LINK C PHE A 62 N1 NRQ A 63 1555 1555 1.49 LINK C3 NRQ A 63 N SER A 66 1555 1555 1.32 CISPEP 1 GLY A 49 PRO A 50 0 -6.05 CISPEP 2 PHE A 84 PRO A 85 0 11.65 CRYST1 92.697 92.697 53.121 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010788 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010788 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018825 0.00000