HEADER TRANSPORT PROTEIN 14-MAY-13 4KPT TITLE CRYSTAL STRUCTURE OF SUBSTRATE BINDING DOMAIN 1 (SBD1) OF ABC TITLE 2 TRANSPORTER GLNPQ FROM LACTOCOCCUS LACTIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTAMINE ABC TRANSPORTER PERMEASE AND SUBSTRATE BINDING COMPND 3 PROTEIN PROTEIN; COMPND 4 CHAIN: A, B; COMPND 5 FRAGMENT: SUBSTRATE BINDING DOMAIN 1, UNP RESIDUES 1-251; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTOCOCCUS LACTIS SUBSP. LACTIS; SOURCE 3 ORGANISM_TAXID: 272623; SOURCE 4 STRAIN: IL1403; SOURCE 5 GENE: GLNP, L165, LL1759; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GLUTAMINE BINDING PROTEIN, AMINO ACID TRANSPORT, TRANSPORT PROTEIN, KEYWDS 2 EXTRACELLULAR EXPDTA X-RAY DIFFRACTION AUTHOR A.VUJICIC ZAGAR,A.GUSKOV,G.K.SCHUURMAN-WOLTERS,D.J.SLOTBOOM,B.POOLMAN REVDAT 3 28-FEB-24 4KPT 1 REMARK REVDAT 2 20-NOV-13 4KPT 1 JRNL REVDAT 1 11-SEP-13 4KPT 0 JRNL AUTH F.FULYANI,G.K.SCHUURMAN-WOLTERS,A.V.ZAGAR,A.GUSKOV, JRNL AUTH 2 D.J.SLOTBOOM,B.POOLMAN JRNL TITL FUNCTIONAL DIVERSITY OF TANDEM SUBSTRATE-BINDING DOMAINS IN JRNL TITL 2 ABC TRANSPORTERS FROM PATHOGENIC BACTERIA. JRNL REF STRUCTURE V. 21 1879 2013 JRNL REFN ISSN 0969-2126 JRNL PMID 23994008 JRNL DOI 10.1016/J.STR.2013.07.020 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 17.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.6 REMARK 3 NUMBER OF REFLECTIONS : 76731 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.142 REMARK 3 R VALUE (WORKING SET) : 0.140 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 3857 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 1.4171 - 1.4000 0.93 2489 161 0.2285 0.2594 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.400 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 3789 REMARK 3 ANGLE : 1.245 5069 REMARK 3 CHIRALITY : 0.068 534 REMARK 3 PLANARITY : 0.006 631 REMARK 3 DIHEDRAL : 15.378 1495 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4KPT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000079642. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-FEB-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9724 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 76748 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 17.943 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.29200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40% PEG 400, 5% PEG 3000, 0.1M MES, PH REMARK 280 6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 281K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 LYS A 3 REMARK 465 LEU A 4 REMARK 465 PHE A 5 REMARK 465 PHE A 6 REMARK 465 ALA A 7 REMARK 465 LEU A 8 REMARK 465 ALA A 9 REMARK 465 MET A 10 REMARK 465 MET A 11 REMARK 465 LEU A 12 REMARK 465 ALA A 13 REMARK 465 THR A 14 REMARK 465 VAL A 15 REMARK 465 THR A 16 REMARK 465 ALA A 17 REMARK 465 PHE A 18 REMARK 465 LEU A 19 REMARK 465 VAL A 20 REMARK 465 ALA A 21 REMARK 465 PRO A 22 REMARK 465 SER A 23 REMARK 465 VAL A 24 REMARK 465 LYS A 25 REMARK 465 ALA A 26 REMARK 465 GLU A 27 REMARK 465 THR A 28 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 LYS B 3 REMARK 465 LEU B 4 REMARK 465 PHE B 5 REMARK 465 PHE B 6 REMARK 465 ALA B 7 REMARK 465 LEU B 8 REMARK 465 ALA B 9 REMARK 465 MET B 10 REMARK 465 MET B 11 REMARK 465 LEU B 12 REMARK 465 ALA B 13 REMARK 465 THR B 14 REMARK 465 VAL B 15 REMARK 465 THR B 16 REMARK 465 ALA B 17 REMARK 465 PHE B 18 REMARK 465 LEU B 19 REMARK 465 VAL B 20 REMARK 465 ALA B 21 REMARK 465 PRO B 22 REMARK 465 SER B 23 REMARK 465 VAL B 24 REMARK 465 LYS B 25 REMARK 465 ALA B 26 REMARK 465 GLU B 27 REMARK 465 THR B 28 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O4 PEG A 307 O4 PEG A 311 2.00 REMARK 500 O1 PG4 B 305 O HOH B 460 2.05 REMARK 500 O HOH A 565 O HOH A 667 2.11 REMARK 500 OD1 ASP A 241 O HOH A 618 2.11 REMARK 500 O HOH B 485 O HOH B 626 2.16 REMARK 500 O HOH A 633 O HOH A 646 2.16 REMARK 500 O HOH B 488 O HOH B 617 2.17 REMARK 500 O HOH A 662 O HOH A 663 2.18 REMARK 500 O HOH A 629 O HOH A 654 2.18 REMARK 500 O ALA A 251 O HOH A 659 2.18 REMARK 500 NE2 GLN A 59 O HOH A 639 2.18 REMARK 500 OD2 ASP A 131 O HOH A 635 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP A 225 OG1 THR B 222 1544 1.99 REMARK 500 NZ LYS A 125 O4 PEG A 310 1556 2.10 REMARK 500 O HOH B 559 O HOH B 579 1554 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 37 100.85 -170.07 REMARK 500 ALA A 93 51.82 -166.75 REMARK 500 SER B 37 102.49 -168.30 REMARK 500 TYR B 38 69.79 -150.69 REMARK 500 ALA B 93 48.99 -167.33 REMARK 500 SER B 127 -0.27 -148.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PG4 B 302 REMARK 610 PG4 B 306 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MES A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE P6G A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ETE A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE P6G A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 312 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MES B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 307 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4KQP RELATED DB: PDB REMARK 900 SUBSTRATE BINDING DOMAIN 2 (SBD2) IN CLOSED CONFORMATION REMARK 900 RELATED ID: 4KR5 RELATED DB: PDB DBREF 4KPT A 1 251 UNP Q9CES5 Q9CES5_LACLA 1 251 DBREF 4KPT B 1 251 UNP Q9CES5 Q9CES5_LACLA 1 251 SEQRES 1 A 251 MET LYS LYS LEU PHE PHE ALA LEU ALA MET MET LEU ALA SEQRES 2 A 251 THR VAL THR ALA PHE LEU VAL ALA PRO SER VAL LYS ALA SEQRES 3 A 251 GLU THR THR VAL LYS ILE ALA SER ASP SER SER TYR ALA SEQRES 4 A 251 PRO PHE GLU PHE GLN ASN GLY GLN LYS LYS TRP VAL GLY SEQRES 5 A 251 ILE ASP VAL ASP ILE MET GLN GLU VAL ALA LYS ILE ASN SEQRES 6 A 251 ASP TRP LYS LEU GLU MET SER TYR PRO GLY PHE ASP ALA SEQRES 7 A 251 ALA LEU GLN ASN LEU LYS ALA GLY GLN VAL ASP GLY ILE SEQRES 8 A 251 ILE ALA GLY MET THR ILE THR ASP GLU ARG LYS GLU THR SEQRES 9 A 251 PHE ASP PHE SER ASN PRO TYR TYR THR SER ALA LEU THR SEQRES 10 A 251 ILE ALA THR THR LYS ASP SER LYS LEU SER ASP TYR SER SEQRES 11 A 251 ASP LEU LYS GLY LYS ALA VAL GLY ALA LYS ASN GLY THR SEQRES 12 A 251 ALA ALA GLN THR TRP LEU GLN GLU ASN GLN LYS LYS TYR SEQRES 13 A 251 GLY TYR THR ILE LYS THR TYR SER ASP GLY VAL HIS MET SEQRES 14 A 251 PHE ALA ALA LEU SER SER GLY ASN ILE ALA GLY ALA MET SEQRES 15 A 251 ASP GLU VAL PRO VAL ILE SER TYR ALA MET LYS GLN GLY SEQRES 16 A 251 GLN ASP LEU ALA MET ASN PHE PRO SER ILE SER LEU PRO SEQRES 17 A 251 GLY GLY TYR GLY PHE ALA VAL MET LYS GLY LYS ASN SER SEQRES 18 A 251 THR LEU VAL ASP GLY PHE ASN LYS ALA LEU ALA GLU MET SEQRES 19 A 251 LYS SER ASN GLY ASP TYR ASP LYS ILE LEU LYS LYS TYR SEQRES 20 A 251 GLY ILE THR ALA SEQRES 1 B 251 MET LYS LYS LEU PHE PHE ALA LEU ALA MET MET LEU ALA SEQRES 2 B 251 THR VAL THR ALA PHE LEU VAL ALA PRO SER VAL LYS ALA SEQRES 3 B 251 GLU THR THR VAL LYS ILE ALA SER ASP SER SER TYR ALA SEQRES 4 B 251 PRO PHE GLU PHE GLN ASN GLY GLN LYS LYS TRP VAL GLY SEQRES 5 B 251 ILE ASP VAL ASP ILE MET GLN GLU VAL ALA LYS ILE ASN SEQRES 6 B 251 ASP TRP LYS LEU GLU MET SER TYR PRO GLY PHE ASP ALA SEQRES 7 B 251 ALA LEU GLN ASN LEU LYS ALA GLY GLN VAL ASP GLY ILE SEQRES 8 B 251 ILE ALA GLY MET THR ILE THR ASP GLU ARG LYS GLU THR SEQRES 9 B 251 PHE ASP PHE SER ASN PRO TYR TYR THR SER ALA LEU THR SEQRES 10 B 251 ILE ALA THR THR LYS ASP SER LYS LEU SER ASP TYR SER SEQRES 11 B 251 ASP LEU LYS GLY LYS ALA VAL GLY ALA LYS ASN GLY THR SEQRES 12 B 251 ALA ALA GLN THR TRP LEU GLN GLU ASN GLN LYS LYS TYR SEQRES 13 B 251 GLY TYR THR ILE LYS THR TYR SER ASP GLY VAL HIS MET SEQRES 14 B 251 PHE ALA ALA LEU SER SER GLY ASN ILE ALA GLY ALA MET SEQRES 15 B 251 ASP GLU VAL PRO VAL ILE SER TYR ALA MET LYS GLN GLY SEQRES 16 B 251 GLN ASP LEU ALA MET ASN PHE PRO SER ILE SER LEU PRO SEQRES 17 B 251 GLY GLY TYR GLY PHE ALA VAL MET LYS GLY LYS ASN SER SEQRES 18 B 251 THR LEU VAL ASP GLY PHE ASN LYS ALA LEU ALA GLU MET SEQRES 19 B 251 LYS SER ASN GLY ASP TYR ASP LYS ILE LEU LYS LYS TYR SEQRES 20 B 251 GLY ILE THR ALA HET MES A 301 12 HET P6G A 302 19 HET PG4 A 303 13 HET ETE A 304 14 HET P6G A 305 19 HET PEG A 306 7 HET PEG A 307 7 HET PEG A 308 7 HET PEG A 309 7 HET PEG A 310 7 HET PEG A 311 7 HET PG4 A 312 13 HET MES B 301 12 HET PG4 B 302 10 HET PEG B 303 7 HET PEG B 304 7 HET PG4 B 305 13 HET PG4 B 306 10 HET PEG B 307 7 HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETNAM P6G HEXAETHYLENE GLYCOL HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM ETE 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN P6G POLYETHYLENE GLYCOL PEG400 FORMUL 3 MES 2(C6 H13 N O4 S) FORMUL 4 P6G 2(C12 H26 O7) FORMUL 5 PG4 5(C8 H18 O5) FORMUL 6 ETE C9 H20 O5 FORMUL 8 PEG 9(C4 H10 O3) FORMUL 22 HOH *517(H2 O) HELIX 1 1 GLY A 52 ASP A 66 1 15 HELIX 2 2 GLY A 75 ALA A 85 1 11 HELIX 3 3 GLU A 100 GLU A 103 5 4 HELIX 4 4 ASP A 128 LEU A 132 5 5 HELIX 5 5 THR A 143 GLY A 157 1 15 HELIX 6 6 ASP A 165 SER A 175 1 11 HELIX 7 7 VAL A 185 GLN A 194 1 10 HELIX 8 8 ASN A 220 GLY A 238 1 19 HELIX 9 9 GLY A 238 TYR A 247 1 10 HELIX 10 10 GLY B 52 ASN B 65 1 14 HELIX 11 11 GLY B 75 ALA B 85 1 11 HELIX 12 12 GLU B 100 GLU B 103 5 4 HELIX 13 13 ASP B 128 LYS B 133 5 6 HELIX 14 14 THR B 143 GLY B 157 1 15 HELIX 15 15 ASP B 165 SER B 175 1 11 HELIX 16 16 VAL B 185 GLN B 194 1 10 HELIX 17 17 ASN B 220 GLY B 238 1 19 HELIX 18 18 GLY B 238 TYR B 247 1 10 SHEET 1 A 3 LEU A 69 SER A 72 0 SHEET 2 A 3 VAL A 30 ALA A 33 1 N VAL A 30 O GLU A 70 SHEET 3 A 3 GLY A 90 ILE A 91 1 O GLY A 90 N ALA A 33 SHEET 1 B 2 PHE A 43 GLN A 44 0 SHEET 2 B 2 TRP A 50 VAL A 51 -1 O VAL A 51 N PHE A 43 SHEET 1 C 2 PHE A 105 PHE A 107 0 SHEET 2 C 2 ALA A 214 MET A 216 -1 O VAL A 215 N ASP A 106 SHEET 1 D 5 THR A 159 TYR A 163 0 SHEET 2 D 5 ALA A 136 LYS A 140 1 N VAL A 137 O THR A 159 SHEET 3 D 5 GLY A 180 GLU A 184 1 O MET A 182 N GLY A 138 SHEET 4 D 5 ALA A 115 THR A 120 -1 N ALA A 119 O ALA A 181 SHEET 5 D 5 ALA A 199 MET A 200 -1 O ALA A 199 N THR A 120 SHEET 1 E 5 THR A 159 TYR A 163 0 SHEET 2 E 5 ALA A 136 LYS A 140 1 N VAL A 137 O THR A 159 SHEET 3 E 5 GLY A 180 GLU A 184 1 O MET A 182 N GLY A 138 SHEET 4 E 5 ALA A 115 THR A 120 -1 N ALA A 119 O ALA A 181 SHEET 5 E 5 ILE A 205 SER A 206 -1 O ILE A 205 N LEU A 116 SHEET 1 F 3 LEU B 69 SER B 72 0 SHEET 2 F 3 VAL B 30 ALA B 33 1 N VAL B 30 O GLU B 70 SHEET 3 F 3 GLY B 90 ILE B 91 1 O GLY B 90 N ALA B 33 SHEET 1 G 2 PHE B 43 GLN B 44 0 SHEET 2 G 2 TRP B 50 VAL B 51 -1 O VAL B 51 N PHE B 43 SHEET 1 H 2 PHE B 105 PHE B 107 0 SHEET 2 H 2 ALA B 214 MET B 216 -1 O VAL B 215 N ASP B 106 SHEET 1 I 5 THR B 159 TYR B 163 0 SHEET 2 I 5 ALA B 136 LYS B 140 1 N VAL B 137 O THR B 159 SHEET 3 I 5 GLY B 180 GLU B 184 1 O MET B 182 N GLY B 138 SHEET 4 I 5 ALA B 115 ALA B 119 -1 N ALA B 119 O ALA B 181 SHEET 5 I 5 ILE B 205 SER B 206 -1 O ILE B 205 N LEU B 116 CISPEP 1 ALA A 39 PRO A 40 0 3.39 CISPEP 2 ALA B 39 PRO B 40 0 1.87 SITE 1 AC1 8 ASP A 35 TYR A 38 ALA A 93 GLY A 94 SITE 2 AC1 8 MET A 95 THR A 96 ARG A 101 HOH A 658 SITE 1 AC2 9 ASN A 141 GLY A 142 GLN A 146 SER A 164 SITE 2 AC2 9 PEG A 306 HOH A 424 ASN B 141 GLY B 142 SITE 3 AC2 9 SER B 164 SITE 1 AC3 3 LYS A 84 THR A 104 HOH A 657 SITE 1 AC4 8 ILE A 97 THR A 98 ASP A 99 LYS A 102 SITE 2 AC4 8 PHE A 107 SER A 108 HOH A 439 HOH B 513 SITE 1 AC5 6 GLN A 44 ASN A 45 GLY A 46 LYS A 48 SITE 2 AC5 6 GLN B 150 GLN B 194 SITE 1 AC6 8 LYS A 140 ASN A 141 GLY A 142 SER A 164 SITE 2 AC6 8 ASP A 165 P6G A 302 HOH A 656 SER B 164 SITE 1 AC7 9 THR A 113 SER A 114 ALA A 115 SER A 204 SITE 2 AC7 9 SER A 206 PEG A 311 HOH A 545 HOH A 552 SITE 3 AC7 9 HOH A 674 SITE 1 AC8 5 GLY A 176 ILE A 178 ALA A 179 HOH A 445 SITE 2 AC8 5 HOH A 451 SITE 1 AC9 4 ALA A 144 THR A 147 TRP A 148 SER A 206 SITE 1 BC1 9 THR A 29 VAL A 30 ASP A 89 LYS A 125 SITE 2 BC1 9 ASN A 220 THR A 222 LEU A 223 PG4 A 312 SITE 3 BC1 9 LYS B 229 SITE 1 BC2 10 THR A 117 VAL A 185 MET A 200 PHE A 202 SITE 2 BC2 10 PRO A 203 SER A 204 PEG A 307 HOH A 477 SITE 3 BC2 10 HOH A 674 LYS B 235 SITE 1 BC3 9 THR A 29 ASN A 65 ASP A 66 PEG A 310 SITE 2 BC3 9 HOH A 524 HOH A 640 ILE B 64 ASN B 65 SITE 3 BC3 9 ASP B 66 SITE 1 BC4 7 TYR B 38 ALA B 93 GLY B 94 MET B 95 SITE 2 BC4 7 THR B 96 ARG B 101 HOH B 411 SITE 1 BC5 10 TRP B 50 VAL B 51 ASP B 56 GLN B 59 SITE 2 BC5 10 THR B 98 ASP B 99 GLU B 100 LYS B 246 SITE 3 BC5 10 TYR B 247 HOH B 524 SITE 1 BC6 5 SER B 36 SER B 37 PHE B 43 GLN B 44 SITE 2 BC6 5 TRP B 50 SITE 1 BC7 4 THR B 121 SER B 174 GLY B 176 HOH B 482 SITE 1 BC8 10 TYR B 38 ALA B 39 LYS B 140 ASP B 183 SITE 2 BC8 10 GLU B 184 VAL B 187 HOH B 460 HOH B 462 SITE 3 BC8 10 HOH B 496 HOH B 632 SITE 1 BC9 8 LYS B 49 PHE B 76 GLU B 100 ARG B 101 SITE 2 BC9 8 GLU B 103 THR B 104 PHE B 105 PEG B 307 SITE 1 CC1 5 LEU B 80 GLN B 81 LYS B 84 PHE B 105 SITE 2 CC1 5 PG4 B 306 CRYST1 35.100 55.629 55.735 93.99 89.71 97.98 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028490 0.003993 0.000135 0.00000 SCALE2 0.000000 0.018152 0.001265 0.00000 SCALE3 0.000000 0.000000 0.017986 0.00000