HEADER TRANSPORT PROTEIN 14-MAY-13 4KPT
TITLE CRYSTAL STRUCTURE OF SUBSTRATE BINDING DOMAIN 1 (SBD1) OF ABC
TITLE 2 TRANSPORTER GLNPQ FROM LACTOCOCCUS LACTIS
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: GLUTAMINE ABC TRANSPORTER PERMEASE AND SUBSTRATE BINDING
COMPND 3 PROTEIN PROTEIN;
COMPND 4 CHAIN: A, B;
COMPND 5 FRAGMENT: SUBSTRATE BINDING DOMAIN 1, UNP RESIDUES 1-251;
COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: LACTOCOCCUS LACTIS SUBSP. LACTIS;
SOURCE 3 ORGANISM_TAXID: 272623;
SOURCE 4 STRAIN: IL1403;
SOURCE 5 GENE: GLNP, L165, LL1759;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS GLUTAMINE BINDING PROTEIN, AMINO ACID TRANSPORT, TRANSPORT PROTEIN,
KEYWDS 2 EXTRACELLULAR
EXPDTA X-RAY DIFFRACTION
AUTHOR A.VUJICIC ZAGAR,A.GUSKOV,G.K.SCHUURMAN-WOLTERS,D.J.SLOTBOOM,B.POOLMAN
REVDAT 3 28-FEB-24 4KPT 1 REMARK
REVDAT 2 20-NOV-13 4KPT 1 JRNL
REVDAT 1 11-SEP-13 4KPT 0
JRNL AUTH F.FULYANI,G.K.SCHUURMAN-WOLTERS,A.V.ZAGAR,A.GUSKOV,
JRNL AUTH 2 D.J.SLOTBOOM,B.POOLMAN
JRNL TITL FUNCTIONAL DIVERSITY OF TANDEM SUBSTRATE-BINDING DOMAINS IN
JRNL TITL 2 ABC TRANSPORTERS FROM PATHOGENIC BACTERIA.
JRNL REF STRUCTURE V. 21 1879 2013
JRNL REFN ISSN 0969-2126
JRNL PMID 23994008
JRNL DOI 10.1016/J.STR.2013.07.020
REMARK 2
REMARK 2 RESOLUTION. 1.40 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2)
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : ML
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 17.94
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960
REMARK 3 COMPLETENESS FOR RANGE (%) : 93.6
REMARK 3 NUMBER OF REFLECTIONS : 76731
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.142
REMARK 3 R VALUE (WORKING SET) : 0.140
REMARK 3 FREE R VALUE : 0.188
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030
REMARK 3 FREE R VALUE TEST SET COUNT : 3857
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 1.4171 - 1.4000 0.93 2489 161 0.2285 0.2594
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL
REMARK 3 SOLVENT RADIUS : 1.11
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.400
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : 0.009 3789
REMARK 3 ANGLE : 1.245 5069
REMARK 3 CHIRALITY : 0.068 534
REMARK 3 PLANARITY : 0.006 631
REMARK 3 DIHEDRAL : 15.378 1495
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : NULL
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 4KPT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-MAY-13.
REMARK 100 THE DEPOSITION ID IS D_1000079642.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 27-FEB-10
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 6
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : ESRF
REMARK 200 BEAMLINE : ID23-1
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.9724
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : SCALA
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 76748
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400
REMARK 200 RESOLUTION RANGE LOW (A) : 17.943
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.500
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 93.5
REMARK 200 DATA REDUNDANCY : NULL
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.48
REMARK 200 COMPLETENESS FOR SHELL (%) : 92.9
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : 0.29200
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.500
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 37.52
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.97
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 40% PEG 400, 5% PEG 3000, 0.1M MES, PH
REMARK 280 6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 281K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1, 2
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350
REMARK 350 BIOMOLECULE: 2
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A 1
REMARK 465 LYS A 2
REMARK 465 LYS A 3
REMARK 465 LEU A 4
REMARK 465 PHE A 5
REMARK 465 PHE A 6
REMARK 465 ALA A 7
REMARK 465 LEU A 8
REMARK 465 ALA A 9
REMARK 465 MET A 10
REMARK 465 MET A 11
REMARK 465 LEU A 12
REMARK 465 ALA A 13
REMARK 465 THR A 14
REMARK 465 VAL A 15
REMARK 465 THR A 16
REMARK 465 ALA A 17
REMARK 465 PHE A 18
REMARK 465 LEU A 19
REMARK 465 VAL A 20
REMARK 465 ALA A 21
REMARK 465 PRO A 22
REMARK 465 SER A 23
REMARK 465 VAL A 24
REMARK 465 LYS A 25
REMARK 465 ALA A 26
REMARK 465 GLU A 27
REMARK 465 THR A 28
REMARK 465 MET B 1
REMARK 465 LYS B 2
REMARK 465 LYS B 3
REMARK 465 LEU B 4
REMARK 465 PHE B 5
REMARK 465 PHE B 6
REMARK 465 ALA B 7
REMARK 465 LEU B 8
REMARK 465 ALA B 9
REMARK 465 MET B 10
REMARK 465 MET B 11
REMARK 465 LEU B 12
REMARK 465 ALA B 13
REMARK 465 THR B 14
REMARK 465 VAL B 15
REMARK 465 THR B 16
REMARK 465 ALA B 17
REMARK 465 PHE B 18
REMARK 465 LEU B 19
REMARK 465 VAL B 20
REMARK 465 ALA B 21
REMARK 465 PRO B 22
REMARK 465 SER B 23
REMARK 465 VAL B 24
REMARK 465 LYS B 25
REMARK 465 ALA B 26
REMARK 465 GLU B 27
REMARK 465 THR B 28
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O4 PEG A 307 O4 PEG A 311 2.00
REMARK 500 O1 PG4 B 305 O HOH B 460 2.05
REMARK 500 O HOH A 565 O HOH A 667 2.11
REMARK 500 OD1 ASP A 241 O HOH A 618 2.11
REMARK 500 O HOH B 485 O HOH B 626 2.16
REMARK 500 O HOH A 633 O HOH A 646 2.16
REMARK 500 O HOH B 488 O HOH B 617 2.17
REMARK 500 O HOH A 662 O HOH A 663 2.18
REMARK 500 O HOH A 629 O HOH A 654 2.18
REMARK 500 O ALA A 251 O HOH A 659 2.18
REMARK 500 NE2 GLN A 59 O HOH A 639 2.18
REMARK 500 OD2 ASP A 131 O HOH A 635 2.19
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375
REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.
REMARK 500
REMARK 500 DISTANCE CUTOFF:
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE
REMARK 500 OD2 ASP A 225 OG1 THR B 222 1544 1.99
REMARK 500 NZ LYS A 125 O4 PEG A 310 1556 2.10
REMARK 500 O HOH B 559 O HOH B 579 1554 2.17
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 SER A 37 100.85 -170.07
REMARK 500 ALA A 93 51.82 -166.75
REMARK 500 SER B 37 102.49 -168.30
REMARK 500 TYR B 38 69.79 -150.69
REMARK 500 ALA B 93 48.99 -167.33
REMARK 500 SER B 127 -0.27 -148.51
REMARK 500
REMARK 500 REMARK: NULL
REMARK 610
REMARK 610 MISSING HETEROATOM
REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 610 I=INSERTION CODE):
REMARK 610 M RES C SSEQI
REMARK 610 PG4 B 302
REMARK 610 PG4 B 306
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MES A 301
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE P6G A 302
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 303
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ETE A 304
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE P6G A 305
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 306
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 307
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC8
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 308
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC9
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 309
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 310
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 311
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 312
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MES B 301
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 B 302
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 303
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 304
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC8
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 B 305
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC9
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 B 306
REMARK 800
REMARK 800 SITE_IDENTIFIER: CC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 307
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 4KQP RELATED DB: PDB
REMARK 900 SUBSTRATE BINDING DOMAIN 2 (SBD2) IN CLOSED CONFORMATION
REMARK 900 RELATED ID: 4KR5 RELATED DB: PDB
DBREF 4KPT A 1 251 UNP Q9CES5 Q9CES5_LACLA 1 251
DBREF 4KPT B 1 251 UNP Q9CES5 Q9CES5_LACLA 1 251
SEQRES 1 A 251 MET LYS LYS LEU PHE PHE ALA LEU ALA MET MET LEU ALA
SEQRES 2 A 251 THR VAL THR ALA PHE LEU VAL ALA PRO SER VAL LYS ALA
SEQRES 3 A 251 GLU THR THR VAL LYS ILE ALA SER ASP SER SER TYR ALA
SEQRES 4 A 251 PRO PHE GLU PHE GLN ASN GLY GLN LYS LYS TRP VAL GLY
SEQRES 5 A 251 ILE ASP VAL ASP ILE MET GLN GLU VAL ALA LYS ILE ASN
SEQRES 6 A 251 ASP TRP LYS LEU GLU MET SER TYR PRO GLY PHE ASP ALA
SEQRES 7 A 251 ALA LEU GLN ASN LEU LYS ALA GLY GLN VAL ASP GLY ILE
SEQRES 8 A 251 ILE ALA GLY MET THR ILE THR ASP GLU ARG LYS GLU THR
SEQRES 9 A 251 PHE ASP PHE SER ASN PRO TYR TYR THR SER ALA LEU THR
SEQRES 10 A 251 ILE ALA THR THR LYS ASP SER LYS LEU SER ASP TYR SER
SEQRES 11 A 251 ASP LEU LYS GLY LYS ALA VAL GLY ALA LYS ASN GLY THR
SEQRES 12 A 251 ALA ALA GLN THR TRP LEU GLN GLU ASN GLN LYS LYS TYR
SEQRES 13 A 251 GLY TYR THR ILE LYS THR TYR SER ASP GLY VAL HIS MET
SEQRES 14 A 251 PHE ALA ALA LEU SER SER GLY ASN ILE ALA GLY ALA MET
SEQRES 15 A 251 ASP GLU VAL PRO VAL ILE SER TYR ALA MET LYS GLN GLY
SEQRES 16 A 251 GLN ASP LEU ALA MET ASN PHE PRO SER ILE SER LEU PRO
SEQRES 17 A 251 GLY GLY TYR GLY PHE ALA VAL MET LYS GLY LYS ASN SER
SEQRES 18 A 251 THR LEU VAL ASP GLY PHE ASN LYS ALA LEU ALA GLU MET
SEQRES 19 A 251 LYS SER ASN GLY ASP TYR ASP LYS ILE LEU LYS LYS TYR
SEQRES 20 A 251 GLY ILE THR ALA
SEQRES 1 B 251 MET LYS LYS LEU PHE PHE ALA LEU ALA MET MET LEU ALA
SEQRES 2 B 251 THR VAL THR ALA PHE LEU VAL ALA PRO SER VAL LYS ALA
SEQRES 3 B 251 GLU THR THR VAL LYS ILE ALA SER ASP SER SER TYR ALA
SEQRES 4 B 251 PRO PHE GLU PHE GLN ASN GLY GLN LYS LYS TRP VAL GLY
SEQRES 5 B 251 ILE ASP VAL ASP ILE MET GLN GLU VAL ALA LYS ILE ASN
SEQRES 6 B 251 ASP TRP LYS LEU GLU MET SER TYR PRO GLY PHE ASP ALA
SEQRES 7 B 251 ALA LEU GLN ASN LEU LYS ALA GLY GLN VAL ASP GLY ILE
SEQRES 8 B 251 ILE ALA GLY MET THR ILE THR ASP GLU ARG LYS GLU THR
SEQRES 9 B 251 PHE ASP PHE SER ASN PRO TYR TYR THR SER ALA LEU THR
SEQRES 10 B 251 ILE ALA THR THR LYS ASP SER LYS LEU SER ASP TYR SER
SEQRES 11 B 251 ASP LEU LYS GLY LYS ALA VAL GLY ALA LYS ASN GLY THR
SEQRES 12 B 251 ALA ALA GLN THR TRP LEU GLN GLU ASN GLN LYS LYS TYR
SEQRES 13 B 251 GLY TYR THR ILE LYS THR TYR SER ASP GLY VAL HIS MET
SEQRES 14 B 251 PHE ALA ALA LEU SER SER GLY ASN ILE ALA GLY ALA MET
SEQRES 15 B 251 ASP GLU VAL PRO VAL ILE SER TYR ALA MET LYS GLN GLY
SEQRES 16 B 251 GLN ASP LEU ALA MET ASN PHE PRO SER ILE SER LEU PRO
SEQRES 17 B 251 GLY GLY TYR GLY PHE ALA VAL MET LYS GLY LYS ASN SER
SEQRES 18 B 251 THR LEU VAL ASP GLY PHE ASN LYS ALA LEU ALA GLU MET
SEQRES 19 B 251 LYS SER ASN GLY ASP TYR ASP LYS ILE LEU LYS LYS TYR
SEQRES 20 B 251 GLY ILE THR ALA
HET MES A 301 12
HET P6G A 302 19
HET PG4 A 303 13
HET ETE A 304 14
HET P6G A 305 19
HET PEG A 306 7
HET PEG A 307 7
HET PEG A 308 7
HET PEG A 309 7
HET PEG A 310 7
HET PEG A 311 7
HET PG4 A 312 13
HET MES B 301 12
HET PG4 B 302 10
HET PEG B 303 7
HET PEG B 304 7
HET PG4 B 305 13
HET PG4 B 306 10
HET PEG B 307 7
HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID
HETNAM P6G HEXAETHYLENE GLYCOL
HETNAM PG4 TETRAETHYLENE GLYCOL
HETNAM ETE 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL
HETNAM PEG DI(HYDROXYETHYL)ETHER
HETSYN P6G POLYETHYLENE GLYCOL PEG400
FORMUL 3 MES 2(C6 H13 N O4 S)
FORMUL 4 P6G 2(C12 H26 O7)
FORMUL 5 PG4 5(C8 H18 O5)
FORMUL 6 ETE C9 H20 O5
FORMUL 8 PEG 9(C4 H10 O3)
FORMUL 22 HOH *517(H2 O)
HELIX 1 1 GLY A 52 ASP A 66 1 15
HELIX 2 2 GLY A 75 ALA A 85 1 11
HELIX 3 3 GLU A 100 GLU A 103 5 4
HELIX 4 4 ASP A 128 LEU A 132 5 5
HELIX 5 5 THR A 143 GLY A 157 1 15
HELIX 6 6 ASP A 165 SER A 175 1 11
HELIX 7 7 VAL A 185 GLN A 194 1 10
HELIX 8 8 ASN A 220 GLY A 238 1 19
HELIX 9 9 GLY A 238 TYR A 247 1 10
HELIX 10 10 GLY B 52 ASN B 65 1 14
HELIX 11 11 GLY B 75 ALA B 85 1 11
HELIX 12 12 GLU B 100 GLU B 103 5 4
HELIX 13 13 ASP B 128 LYS B 133 5 6
HELIX 14 14 THR B 143 GLY B 157 1 15
HELIX 15 15 ASP B 165 SER B 175 1 11
HELIX 16 16 VAL B 185 GLN B 194 1 10
HELIX 17 17 ASN B 220 GLY B 238 1 19
HELIX 18 18 GLY B 238 TYR B 247 1 10
SHEET 1 A 3 LEU A 69 SER A 72 0
SHEET 2 A 3 VAL A 30 ALA A 33 1 N VAL A 30 O GLU A 70
SHEET 3 A 3 GLY A 90 ILE A 91 1 O GLY A 90 N ALA A 33
SHEET 1 B 2 PHE A 43 GLN A 44 0
SHEET 2 B 2 TRP A 50 VAL A 51 -1 O VAL A 51 N PHE A 43
SHEET 1 C 2 PHE A 105 PHE A 107 0
SHEET 2 C 2 ALA A 214 MET A 216 -1 O VAL A 215 N ASP A 106
SHEET 1 D 5 THR A 159 TYR A 163 0
SHEET 2 D 5 ALA A 136 LYS A 140 1 N VAL A 137 O THR A 159
SHEET 3 D 5 GLY A 180 GLU A 184 1 O MET A 182 N GLY A 138
SHEET 4 D 5 ALA A 115 THR A 120 -1 N ALA A 119 O ALA A 181
SHEET 5 D 5 ALA A 199 MET A 200 -1 O ALA A 199 N THR A 120
SHEET 1 E 5 THR A 159 TYR A 163 0
SHEET 2 E 5 ALA A 136 LYS A 140 1 N VAL A 137 O THR A 159
SHEET 3 E 5 GLY A 180 GLU A 184 1 O MET A 182 N GLY A 138
SHEET 4 E 5 ALA A 115 THR A 120 -1 N ALA A 119 O ALA A 181
SHEET 5 E 5 ILE A 205 SER A 206 -1 O ILE A 205 N LEU A 116
SHEET 1 F 3 LEU B 69 SER B 72 0
SHEET 2 F 3 VAL B 30 ALA B 33 1 N VAL B 30 O GLU B 70
SHEET 3 F 3 GLY B 90 ILE B 91 1 O GLY B 90 N ALA B 33
SHEET 1 G 2 PHE B 43 GLN B 44 0
SHEET 2 G 2 TRP B 50 VAL B 51 -1 O VAL B 51 N PHE B 43
SHEET 1 H 2 PHE B 105 PHE B 107 0
SHEET 2 H 2 ALA B 214 MET B 216 -1 O VAL B 215 N ASP B 106
SHEET 1 I 5 THR B 159 TYR B 163 0
SHEET 2 I 5 ALA B 136 LYS B 140 1 N VAL B 137 O THR B 159
SHEET 3 I 5 GLY B 180 GLU B 184 1 O MET B 182 N GLY B 138
SHEET 4 I 5 ALA B 115 ALA B 119 -1 N ALA B 119 O ALA B 181
SHEET 5 I 5 ILE B 205 SER B 206 -1 O ILE B 205 N LEU B 116
CISPEP 1 ALA A 39 PRO A 40 0 3.39
CISPEP 2 ALA B 39 PRO B 40 0 1.87
SITE 1 AC1 8 ASP A 35 TYR A 38 ALA A 93 GLY A 94
SITE 2 AC1 8 MET A 95 THR A 96 ARG A 101 HOH A 658
SITE 1 AC2 9 ASN A 141 GLY A 142 GLN A 146 SER A 164
SITE 2 AC2 9 PEG A 306 HOH A 424 ASN B 141 GLY B 142
SITE 3 AC2 9 SER B 164
SITE 1 AC3 3 LYS A 84 THR A 104 HOH A 657
SITE 1 AC4 8 ILE A 97 THR A 98 ASP A 99 LYS A 102
SITE 2 AC4 8 PHE A 107 SER A 108 HOH A 439 HOH B 513
SITE 1 AC5 6 GLN A 44 ASN A 45 GLY A 46 LYS A 48
SITE 2 AC5 6 GLN B 150 GLN B 194
SITE 1 AC6 8 LYS A 140 ASN A 141 GLY A 142 SER A 164
SITE 2 AC6 8 ASP A 165 P6G A 302 HOH A 656 SER B 164
SITE 1 AC7 9 THR A 113 SER A 114 ALA A 115 SER A 204
SITE 2 AC7 9 SER A 206 PEG A 311 HOH A 545 HOH A 552
SITE 3 AC7 9 HOH A 674
SITE 1 AC8 5 GLY A 176 ILE A 178 ALA A 179 HOH A 445
SITE 2 AC8 5 HOH A 451
SITE 1 AC9 4 ALA A 144 THR A 147 TRP A 148 SER A 206
SITE 1 BC1 9 THR A 29 VAL A 30 ASP A 89 LYS A 125
SITE 2 BC1 9 ASN A 220 THR A 222 LEU A 223 PG4 A 312
SITE 3 BC1 9 LYS B 229
SITE 1 BC2 10 THR A 117 VAL A 185 MET A 200 PHE A 202
SITE 2 BC2 10 PRO A 203 SER A 204 PEG A 307 HOH A 477
SITE 3 BC2 10 HOH A 674 LYS B 235
SITE 1 BC3 9 THR A 29 ASN A 65 ASP A 66 PEG A 310
SITE 2 BC3 9 HOH A 524 HOH A 640 ILE B 64 ASN B 65
SITE 3 BC3 9 ASP B 66
SITE 1 BC4 7 TYR B 38 ALA B 93 GLY B 94 MET B 95
SITE 2 BC4 7 THR B 96 ARG B 101 HOH B 411
SITE 1 BC5 10 TRP B 50 VAL B 51 ASP B 56 GLN B 59
SITE 2 BC5 10 THR B 98 ASP B 99 GLU B 100 LYS B 246
SITE 3 BC5 10 TYR B 247 HOH B 524
SITE 1 BC6 5 SER B 36 SER B 37 PHE B 43 GLN B 44
SITE 2 BC6 5 TRP B 50
SITE 1 BC7 4 THR B 121 SER B 174 GLY B 176 HOH B 482
SITE 1 BC8 10 TYR B 38 ALA B 39 LYS B 140 ASP B 183
SITE 2 BC8 10 GLU B 184 VAL B 187 HOH B 460 HOH B 462
SITE 3 BC8 10 HOH B 496 HOH B 632
SITE 1 BC9 8 LYS B 49 PHE B 76 GLU B 100 ARG B 101
SITE 2 BC9 8 GLU B 103 THR B 104 PHE B 105 PEG B 307
SITE 1 CC1 5 LEU B 80 GLN B 81 LYS B 84 PHE B 105
SITE 2 CC1 5 PG4 B 306
CRYST1 35.100 55.629 55.735 93.99 89.71 97.98 P 1 2
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.028490 0.003993 0.000135 0.00000
SCALE2 0.000000 0.018152 0.001265 0.00000
SCALE3 0.000000 0.000000 0.017986 0.00000