HEADER CELL CYCLE 16-MAY-13 4KR1 TITLE CRYSTAL STRUCTURE OF THE KINETECHORE PROTEIN IML3 FROM BUDDING YEAST COMPND MOL_ID: 1; COMPND 2 MOLECULE: CENTRAL KINETOCHORE SUBUNIT IML3; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: INCREASED MINICHROMOSOME LOSS PROTEIN 3, MINICHROMOSOME COMPND 5 MAINTENANCE PROTEIN 19; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 STRAIN: S288C; SOURCE 6 GENE: IML3, MCM19, YBR107C, YBR0836; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS CHROMOSOME SEGREGATION, KINETOCHORE PROTEIN, CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR Y.TAO,Q.GUO,M.TENG REVDAT 1 18-DEC-13 4KR1 0 JRNL AUTH Q.GUO,Y.TAO,H.LIU,M.TENG,X.LI JRNL TITL STRUCTURAL INSIGHTS INTO THE ROLE OF THE CHL4-IML3 COMPLEX JRNL TITL 2 IN KINETOCHORE ASSEMBLY JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 69 2412 2013 JRNL REFN ISSN 0907-4449 JRNL PMID 24311582 JRNL DOI 10.1107/S0907444913022397 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.21 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 10955 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.238 REMARK 3 R VALUE (WORKING SET) : 0.237 REMARK 3 FREE R VALUE : 0.262 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 525 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 725 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.22 REMARK 3 BIN R VALUE (WORKING SET) : 0.3160 REMARK 3 BIN FREE R VALUE SET COUNT : 37 REMARK 3 BIN FREE R VALUE : 0.2860 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1675 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 22 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 50.66 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.92000 REMARK 3 B22 (A**2) : 1.92000 REMARK 3 B33 (A**2) : -2.88000 REMARK 3 B12 (A**2) : 0.96000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.414 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.270 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.205 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 20.975 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.930 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1710 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1112 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2321 ; 0.988 ; 1.960 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2732 ; 0.802 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 214 ; 5.954 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 64 ;35.655 ;24.688 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 286 ;17.743 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ;13.755 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 276 ; 0.053 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1857 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 328 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1089 ; 0.855 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 438 ; 0.068 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1757 ; 1.600 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 621 ; 5.234 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 564 ; 4.829 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 243 REMARK 3 ORIGIN FOR THE GROUP (A): -16.8273 -28.4523 -23.7355 REMARK 3 T TENSOR REMARK 3 T11: 0.0598 T22: 0.2165 REMARK 3 T33: 0.1007 T12: 0.0153 REMARK 3 T13: 0.0068 T23: -0.0308 REMARK 3 L TENSOR REMARK 3 L11: 0.0592 L22: 1.0190 REMARK 3 L33: 2.6753 L12: -0.0877 REMARK 3 L13: 0.0745 L23: 0.2837 REMARK 3 S TENSOR REMARK 3 S11: 0.0237 S12: 0.0459 S13: -0.0647 REMARK 3 S21: 0.0439 S22: -0.0208 S23: 0.1354 REMARK 3 S31: -0.0489 S32: 0.3479 S33: -0.0030 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 301 A 322 REMARK 3 ORIGIN FOR THE GROUP (A): -23.8058 -22.7415 -20.9228 REMARK 3 T TENSOR REMARK 3 T11: 0.0383 T22: 0.1375 REMARK 3 T33: 0.1703 T12: -0.0485 REMARK 3 T13: 0.0146 T23: -0.0150 REMARK 3 L TENSOR REMARK 3 L11: 1.0637 L22: 0.1331 REMARK 3 L33: 1.7111 L12: -0.3144 REMARK 3 L13: 1.0949 L23: -0.1731 REMARK 3 S TENSOR REMARK 3 S11: -0.0005 S12: -0.0729 S13: -0.0042 REMARK 3 S21: 0.0099 S22: 0.0522 S23: 0.0005 REMARK 3 S31: 0.0118 S32: 0.0348 S33: -0.0518 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES: WITH TLS ADDED REMARK 4 REMARK 4 4KR1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-MAY-13. REMARK 100 THE RCSB ID CODE IS RCSB079686. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JAN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11039 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 20.200 REMARK 200 R MERGE (I) : 0.10100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 35.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 20.60 REMARK 200 R MERGE FOR SHELL (I) : 0.68600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3M SODIUM FORMATE, 100MM CESIUM REMARK 280 CHLORIDE, 3% PEG 4000, PH 7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 285K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 94.41400 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 94.41400 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 94.41400 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 94.41400 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 94.41400 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 94.41400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 ASP A 43 REMARK 465 PRO A 44 REMARK 465 ASP A 45 REMARK 465 GLY A 46 REMARK 465 GLY A 47 REMARK 465 THR A 48 REMARK 465 ALA A 49 REMARK 465 ALA A 50 REMARK 465 ILE A 62 REMARK 465 SER A 63 REMARK 465 ASN A 64 REMARK 465 LEU A 65 REMARK 465 ASP A 66 REMARK 465 GLU A 67 REMARK 465 GLY A 68 REMARK 465 THR A 69 REMARK 465 GLU A 152 REMARK 465 THR A 153 REMARK 465 GLN A 154 REMARK 465 ASP A 155 REMARK 465 LYS A 156 REMARK 465 ASN A 157 REMARK 465 LEU A 158 REMARK 465 ASN A 179 REMARK 465 SER A 244 REMARK 465 GLU A 245 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 6 CE NZ REMARK 470 LYS A 12 CD CE NZ REMARK 470 LYS A 22 CG CD CE NZ REMARK 470 GLN A 25 CD OE1 NE2 REMARK 470 LEU A 29 CD1 CD2 REMARK 470 GLU A 30 CG CD OE1 OE2 REMARK 470 ARG A 39 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 59 NE CZ NH1 NH2 REMARK 470 LEU A 60 CD1 CD2 REMARK 470 ASP A 61 CG OD1 OD2 REMARK 470 TYR A 70 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 80 CD CE NZ REMARK 470 LYS A 115 CD CE NZ REMARK 470 LYS A 119 CG CD CE NZ REMARK 470 GLU A 138 CG CD OE1 OE2 REMARK 470 ARG A 159 CD NE CZ NH1 NH2 REMARK 470 GLU A 168 CG CD OE1 OE2 REMARK 470 LEU A 173 CG CD1 CD2 REMARK 470 LEU A 175 CG CD1 CD2 REMARK 470 TYR A 177 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 TYR A 191 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASN A 194 OD1 ND2 REMARK 470 GLU A 195 CG CD OE1 OE2 REMARK 470 GLU A 201 CG CD OE1 OE2 REMARK 470 ARG A 202 CD NE CZ NH1 NH2 REMARK 470 ARG A 218 CZ NH1 NH2 REMARK 470 ARG A 226 CG CD NE CZ NH1 NH2 REMARK 470 THR A 243 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 213 -66.38 -128.21 REMARK 500 ARG A 226 38.05 -85.47 REMARK 500 REMARK 500 REMARK: NULL DBREF 4KR1 A 1 245 UNP P38265 IML3_YEAST 1 245 SEQADV 4KR1 GLY A -1 UNP P38265 EXPRESSION TAG SEQADV 4KR1 SER A 0 UNP P38265 EXPRESSION TAG SEQRES 1 A 247 GLY SER MSE PRO TYR THR TRP LYS PHE LEU GLY ILE SER SEQRES 2 A 247 LYS GLN LEU SER LEU GLU ASN GLY ILE ALA LYS LEU ASN SEQRES 3 A 247 GLN LEU LEU ASN LEU GLU VAL ASP LEU ASP ILE GLN THR SEQRES 4 A 247 ILE ARG VAL PRO SER ASP PRO ASP GLY GLY THR ALA ALA SEQRES 5 A 247 ASP GLU TYR ILE ARG TYR GLU MSE ARG LEU ASP ILE SER SEQRES 6 A 247 ASN LEU ASP GLU GLY THR TYR SER LYS PHE ILE PHE LEU SEQRES 7 A 247 GLY ASN SER LYS MSE GLU VAL PRO MSE PHE LEU CYS TYR SEQRES 8 A 247 CYS GLY THR ASP ASN ARG ASN GLU VAL VAL LEU GLN TRP SEQRES 9 A 247 LEU LYS ALA GLU TYR GLY VAL ILE MSE TRP PRO ILE LYS SEQRES 10 A 247 PHE GLU GLN LYS THR MSE ILE LYS LEU ALA ASP ALA SER SEQRES 11 A 247 ILE VAL HIS VAL THR LYS GLU ASN ILE GLU GLN ILE THR SEQRES 12 A 247 TRP PHE SER SER LYS LEU TYR PHE GLU PRO GLU THR GLN SEQRES 13 A 247 ASP LYS ASN LEU ARG GLN PHE SER ILE GLU ILE PRO ARG SEQRES 14 A 247 GLU SER CYS GLU GLY LEU ALA LEU GLY TYR GLY ASN THR SEQRES 15 A 247 MSE HIS PRO TYR ASN ASP ALA ILE VAL PRO TYR ILE TYR SEQRES 16 A 247 ASN GLU THR GLY MSE ALA VAL GLU ARG LEU PRO LEU THR SEQRES 17 A 247 SER VAL ILE LEU ALA GLY HIS THR LYS ILE MSE ARG GLU SEQRES 18 A 247 SER ILE VAL THR SER THR ARG SER LEU ARG ASN ARG VAL SEQRES 19 A 247 LEU ALA VAL VAL LEU GLN SER ILE GLN PHE THR SER GLU MODRES 4KR1 MSE A 1 MET SELENOMETHIONINE MODRES 4KR1 MSE A 58 MET SELENOMETHIONINE MODRES 4KR1 MSE A 81 MET SELENOMETHIONINE MODRES 4KR1 MSE A 85 MET SELENOMETHIONINE MODRES 4KR1 MSE A 111 MET SELENOMETHIONINE MODRES 4KR1 MSE A 121 MET SELENOMETHIONINE MODRES 4KR1 MSE A 181 MET SELENOMETHIONINE MODRES 4KR1 MSE A 198 MET SELENOMETHIONINE MODRES 4KR1 MSE A 217 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 58 8 HET MSE A 81 8 HET MSE A 85 8 HET MSE A 111 8 HET MSE A 121 8 HET MSE A 181 8 HET MSE A 198 8 HET MSE A 217 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 9(C5 H11 N O2 SE) FORMUL 2 HOH *22(H2 O) HELIX 1 1 SER A 15 ASN A 28 1 14 HELIX 2 2 ASN A 94 GLY A 108 1 15 HELIX 3 3 GLU A 117 ILE A 129 1 13 HELIX 4 4 PRO A 166 TYR A 177 1 12 HELIX 5 5 HIS A 182 ALA A 187 1 6 HELIX 6 6 ALA A 187 GLY A 197 1 11 HELIX 7 7 ALA A 199 LEU A 203 5 5 HELIX 8 8 ARG A 229 ILE A 240 1 12 SHEET 1 A 6 ASP A 32 ARG A 39 0 SHEET 2 A 6 GLU A 52 ARG A 59 -1 O ARG A 55 N GLN A 36 SHEET 3 A 6 LYS A 72 GLY A 77 -1 O GLY A 77 N ILE A 54 SHEET 4 A 6 MSE A 85 CYS A 90 -1 O CYS A 88 N ILE A 74 SHEET 5 A 6 TYR A 3 ILE A 10 -1 N LEU A 8 O LEU A 87 SHEET 6 A 6 MSE A 111 PRO A 113 -1 O TRP A 112 N GLY A 9 SHEET 1 B10 ASP A 32 ARG A 39 0 SHEET 2 B10 GLU A 52 ARG A 59 -1 O ARG A 55 N GLN A 36 SHEET 3 B10 LYS A 72 GLY A 77 -1 O GLY A 77 N ILE A 54 SHEET 4 B10 MSE A 85 CYS A 90 -1 O CYS A 88 N ILE A 74 SHEET 5 B10 TYR A 3 ILE A 10 -1 N LEU A 8 O LEU A 87 SHEET 6 B10 ILE A 221 THR A 223 -1 O ILE A 221 N TRP A 5 SHEET 7 B10 THR A 214 MSE A 217 -1 N LYS A 215 O VAL A 222 SHEET 8 B10 LEU A 205 LEU A 210 -1 N LEU A 210 O THR A 214 SHEET 9 B10 SER A 145 PHE A 149 -1 N LYS A 146 O ILE A 209 SHEET 10 B10 PHE A 161 ILE A 165 -1 O ILE A 163 N LEU A 147 SHEET 1 C 2 VAL A 130 VAL A 132 0 SHEET 2 C 2 GLU A 138 ILE A 140 -1 O GLN A 139 N HIS A 131 LINK C MSE A 1 N PRO A 2 1555 1555 1.34 LINK C GLU A 57 N MSE A 58 1555 1555 1.33 LINK C MSE A 58 N ARG A 59 1555 1555 1.33 LINK C LYS A 80 N MSE A 81 1555 1555 1.33 LINK C MSE A 81 N GLU A 82 1555 1555 1.33 LINK C PRO A 84 N MSE A 85 1555 1555 1.33 LINK C MSE A 85 N PHE A 86 1555 1555 1.33 LINK C ILE A 110 N MSE A 111 1555 1555 1.33 LINK C MSE A 111 N TRP A 112 1555 1555 1.33 LINK C THR A 120 N MSE A 121 1555 1555 1.33 LINK C MSE A 121 N ILE A 122 1555 1555 1.33 LINK C THR A 180 N MSE A 181 1555 1555 1.33 LINK C MSE A 181 N HIS A 182 1555 1555 1.33 LINK C GLY A 197 N MSE A 198 1555 1555 1.33 LINK C MSE A 198 N ALA A 199 1555 1555 1.33 LINK C ILE A 216 N MSE A 217 1555 1555 1.33 LINK C MSE A 217 N ARG A 218 1555 1555 1.33 CRYST1 73.026 73.026 188.828 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013694 0.007906 0.000000 0.00000 SCALE2 0.000000 0.015812 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005296 0.00000 HETATM 1 N MSE A 1 -20.582 -39.096 -11.386 1.00 54.99 N ANISOU 1 N MSE A 1 7389 6834 6670 381 526 -232 N HETATM 2 CA MSE A 1 -20.760 -38.382 -12.689 1.00 54.37 C ANISOU 2 CA MSE A 1 7138 6847 6673 356 488 -248 C HETATM 3 C MSE A 1 -20.095 -39.160 -13.833 1.00 52.98 C ANISOU 3 C MSE A 1 6968 6708 6455 443 409 -265 C HETATM 4 O MSE A 1 -18.868 -39.260 -13.896 1.00 52.98 O ANISOU 4 O MSE A 1 6971 6791 6364 555 348 -264 O HETATM 5 CB MSE A 1 -20.211 -36.960 -12.608 1.00 54.57 C ANISOU 5 CB MSE A 1 7041 6988 6703 356 467 -237 C HETATM 6 CG MSE A 1 -21.232 -35.939 -12.111 1.00 57.50 C ANISOU 6 CG MSE A 1 7358 7332 7155 258 539 -230 C HETATM 7 SE MSE A 1 -20.755 -34.110 -12.623 1.00 65.50 SE ANISOU 7 SE MSE A 1 8224 8477 8186 244 498 -225 SE HETATM 8 CE MSE A 1 -18.848 -34.142 -12.207 1.00 63.88 C ANISOU 8 CE MSE A 1 8048 8384 7837 333 421 -212 C