HEADER TRANSFERASE 20-MAY-13 4KT7 TITLE THE CRYSTAL STRUCTURE OF 4-DIPHOSPHOCYTIDYL-2C-METHYL-D- TITLE 2 ERYTHRITOLSYNTHASE FROM ANAEROCOCCUS PREVOTII DSM 20548 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 4-DIPHOSPHOCYTIDYL-2C-METHYL-D-ERYTHRITOL SYNTHASE, MEP COMPND 5 CYTIDYLYLTRANSFERASE; COMPND 6 EC: 2.7.7.60; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ANAEROCOCCUS PREVOTII; SOURCE 3 ORGANISM_COMMON: PEPTOSTREPTOCOCCUS PREVOTII; SOURCE 4 ORGANISM_TAXID: 525919; SOURCE 5 STRAIN: DSM 20548; SOURCE 6 GENE: APRE_0175, ISPD; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)MAGIC; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR D.BOREK,K.TAN,L.STOLS,W.H.ESCHENFEIDT,Z.OTWINOSKI,A.JOACHIMIAK, AUTHOR 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 2 17-JUL-19 4KT7 1 REMARK LINK REVDAT 1 05-JUN-13 4KT7 0 JRNL AUTH D.BOREK,K.TAN,L.STOLS,W.H.ESCHENFEIDT,Z.OTWINOSKI, JRNL AUTH 2 A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF JRNL TITL 2 4-DIPHOSPHOCYTIDYL-2C-METHYL-D-ERYTHRITOLSYNTHASE FROM JRNL TITL 3 ANAEROCOCCUS PREVOTII DSM 20548 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.2 REMARK 3 NUMBER OF REFLECTIONS : 29845 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1494 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.6149 - 4.4479 0.99 3026 159 0.1761 0.1951 REMARK 3 2 4.4479 - 3.5317 1.00 2888 143 0.1530 0.2206 REMARK 3 3 3.5317 - 3.0856 1.00 2811 159 0.1678 0.2051 REMARK 3 4 3.0856 - 2.8037 1.00 2821 152 0.1939 0.2783 REMARK 3 5 2.8037 - 2.6028 1.00 2801 158 0.2005 0.2427 REMARK 3 6 2.6028 - 2.4494 1.00 2798 137 0.1925 0.2253 REMARK 3 7 2.4494 - 2.3267 0.99 2800 133 0.1957 0.2508 REMARK 3 8 2.3267 - 2.2255 0.96 2686 148 0.2042 0.2542 REMARK 3 9 2.2255 - 2.1398 0.87 2382 121 0.2121 0.2890 REMARK 3 10 2.1398 - 2.0660 0.71 1960 109 0.2057 0.2643 REMARK 3 11 2.0660 - 2.0014 0.50 1378 75 0.2159 0.2515 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.990 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.13000 REMARK 3 B22 (A**2) : 0.79000 REMARK 3 B33 (A**2) : -0.65000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3699 REMARK 3 ANGLE : 1.082 4993 REMARK 3 CHIRALITY : 0.078 578 REMARK 3 PLANARITY : 0.003 635 REMARK 3 DIHEDRAL : 14.082 1402 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -2 THROUGH 13 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.0681 -19.0568 16.5456 REMARK 3 T TENSOR REMARK 3 T11: 0.4162 T22: 0.2564 REMARK 3 T33: 0.2139 T12: 0.0924 REMARK 3 T13: 0.0236 T23: 0.0490 REMARK 3 L TENSOR REMARK 3 L11: 4.4342 L22: 1.3341 REMARK 3 L33: 3.2371 L12: -0.5080 REMARK 3 L13: -0.6596 L23: 1.1660 REMARK 3 S TENSOR REMARK 3 S11: -0.1869 S12: -0.8759 S13: -0.1498 REMARK 3 S21: 0.8856 S22: -0.0683 S23: 0.0160 REMARK 3 S31: -0.3108 S32: 0.2460 S33: 0.1431 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 14 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.8178 -4.3928 1.5750 REMARK 3 T TENSOR REMARK 3 T11: 0.4353 T22: 1.0314 REMARK 3 T33: 0.8126 T12: -0.1751 REMARK 3 T13: 0.1586 T23: 0.1581 REMARK 3 L TENSOR REMARK 3 L11: 6.0135 L22: 6.5167 REMARK 3 L33: 1.5141 L12: 2.3662 REMARK 3 L13: -0.9174 L23: 2.4229 REMARK 3 S TENSOR REMARK 3 S11: 0.1831 S12: 0.8442 S13: 0.1459 REMARK 3 S21: -0.8540 S22: 0.5287 S23: -0.2337 REMARK 3 S31: -1.1642 S32: 0.4016 S33: -0.7236 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 36 THROUGH 71 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.5157 -14.9452 6.5832 REMARK 3 T TENSOR REMARK 3 T11: 0.1533 T22: 0.4911 REMARK 3 T33: 0.3646 T12: 0.0481 REMARK 3 T13: -0.0144 T23: 0.0374 REMARK 3 L TENSOR REMARK 3 L11: 2.9559 L22: 2.1165 REMARK 3 L33: 0.8246 L12: 0.9883 REMARK 3 L13: -0.2405 L23: -0.0335 REMARK 3 S TENSOR REMARK 3 S11: 0.2669 S12: -0.0090 S13: -0.3192 REMARK 3 S21: 0.0494 S22: -0.2308 S23: -0.5477 REMARK 3 S31: 0.1320 S32: 0.9927 S33: -0.0757 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 72 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.0491 -17.3416 4.0557 REMARK 3 T TENSOR REMARK 3 T11: 0.1312 T22: 0.2773 REMARK 3 T33: 0.1894 T12: 0.0173 REMARK 3 T13: -0.0007 T23: 0.0285 REMARK 3 L TENSOR REMARK 3 L11: 2.8987 L22: 2.9990 REMARK 3 L33: 2.2843 L12: 0.7444 REMARK 3 L13: -0.2270 L23: 0.9658 REMARK 3 S TENSOR REMARK 3 S11: 0.0610 S12: 0.0211 S13: -0.3900 REMARK 3 S21: 0.2136 S22: -0.1498 S23: -0.2306 REMARK 3 S31: 0.3628 S32: 0.6956 S33: 0.0323 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 108 THROUGH 146 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.2511 -1.5601 14.9726 REMARK 3 T TENSOR REMARK 3 T11: 0.1140 T22: 0.1560 REMARK 3 T33: 0.0833 T12: -0.0413 REMARK 3 T13: -0.0347 T23: 0.0040 REMARK 3 L TENSOR REMARK 3 L11: 1.7851 L22: 1.5475 REMARK 3 L33: 0.9333 L12: -0.4264 REMARK 3 L13: 0.1667 L23: -0.1899 REMARK 3 S TENSOR REMARK 3 S11: -0.0399 S12: -0.2041 S13: 0.0074 REMARK 3 S21: 0.3660 S22: -0.0653 S23: -0.2312 REMARK 3 S31: -0.1313 S32: 0.1783 S33: 0.0735 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 147 THROUGH 165 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.0414 10.9010 10.2566 REMARK 3 T TENSOR REMARK 3 T11: 0.2027 T22: 0.1444 REMARK 3 T33: 0.2329 T12: -0.0448 REMARK 3 T13: -0.0210 T23: -0.0712 REMARK 3 L TENSOR REMARK 3 L11: 2.5171 L22: 3.8209 REMARK 3 L33: 0.7450 L12: -2.4319 REMARK 3 L13: 0.0121 L23: -1.0851 REMARK 3 S TENSOR REMARK 3 S11: 0.0953 S12: 0.0805 S13: 0.0796 REMARK 3 S21: 0.2339 S22: -0.1894 S23: 0.2884 REMARK 3 S31: -0.1752 S32: 0.0208 S33: 0.0999 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 166 THROUGH 196 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.7211 -10.7880 3.1419 REMARK 3 T TENSOR REMARK 3 T11: 0.1409 T22: 0.2024 REMARK 3 T33: 0.1301 T12: -0.0186 REMARK 3 T13: 0.0071 T23: 0.0085 REMARK 3 L TENSOR REMARK 3 L11: 3.7236 L22: 3.2548 REMARK 3 L33: 3.1294 L12: -0.9779 REMARK 3 L13: 0.4283 L23: 1.7741 REMARK 3 S TENSOR REMARK 3 S11: 0.1136 S12: 0.2794 S13: 0.0997 REMARK 3 S21: -0.1607 S22: -0.2834 S23: 0.3482 REMARK 3 S31: -0.0889 S32: -0.2508 S33: 0.1525 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 197 THROUGH 217 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.1635 -2.8564 12.2480 REMARK 3 T TENSOR REMARK 3 T11: 0.1867 T22: 0.2041 REMARK 3 T33: 0.1957 T12: -0.1232 REMARK 3 T13: -0.0399 T23: -0.0012 REMARK 3 L TENSOR REMARK 3 L11: 2.1374 L22: 1.5877 REMARK 3 L33: 1.0641 L12: 0.4230 REMARK 3 L13: 0.4974 L23: 0.1913 REMARK 3 S TENSOR REMARK 3 S11: -0.2530 S12: -0.0760 S13: -0.0743 REMARK 3 S21: -0.1011 S22: -0.0210 S23: -0.0447 REMARK 3 S31: -0.4785 S32: 0.0942 S33: 0.1047 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 218 THROUGH 230 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.8076 6.5216 10.1730 REMARK 3 T TENSOR REMARK 3 T11: 0.6439 T22: 0.6269 REMARK 3 T33: 0.5933 T12: -0.3479 REMARK 3 T13: 0.0223 T23: 0.0289 REMARK 3 L TENSOR REMARK 3 L11: 6.4007 L22: 5.6496 REMARK 3 L33: 8.3418 L12: 0.6157 REMARK 3 L13: -0.8061 L23: -0.7837 REMARK 3 S TENSOR REMARK 3 S11: -0.3391 S12: -0.3894 S13: 0.1580 REMARK 3 S21: -0.3306 S22: 0.1098 S23: -0.8284 REMARK 3 S31: -1.2276 S32: 0.7469 S33: 0.2184 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 3 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.1060 31.9426 11.5034 REMARK 3 T TENSOR REMARK 3 T11: 0.4882 T22: 0.3655 REMARK 3 T33: 0.3541 T12: -0.0454 REMARK 3 T13: -0.0686 T23: -0.1197 REMARK 3 L TENSOR REMARK 3 L11: 3.4922 L22: 3.9856 REMARK 3 L33: 1.8038 L12: -0.4119 REMARK 3 L13: -2.0536 L23: 0.8741 REMARK 3 S TENSOR REMARK 3 S11: -0.1253 S12: 0.0527 S13: 0.1183 REMARK 3 S21: -0.1209 S22: 0.2742 S23: -0.8254 REMARK 3 S31: -0.3423 S32: 1.1455 S33: -0.2300 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 36 THROUGH 71 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.9555 36.3461 12.2301 REMARK 3 T TENSOR REMARK 3 T11: 0.5060 T22: 0.4052 REMARK 3 T33: 0.5102 T12: -0.4253 REMARK 3 T13: 0.0046 T23: -0.2273 REMARK 3 L TENSOR REMARK 3 L11: 2.6899 L22: 2.6337 REMARK 3 L33: 2.3140 L12: -0.9244 REMARK 3 L13: -1.1863 L23: -1.6066 REMARK 3 S TENSOR REMARK 3 S11: -0.2305 S12: -0.5117 S13: 0.5227 REMARK 3 S21: -0.1435 S22: 0.5965 S23: -0.9556 REMARK 3 S31: -1.1564 S32: 1.1422 S33: 0.3143 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 72 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.3347 37.5678 14.9647 REMARK 3 T TENSOR REMARK 3 T11: 0.5642 T22: 0.1234 REMARK 3 T33: 0.3243 T12: -0.0598 REMARK 3 T13: -0.0207 T23: -0.0422 REMARK 3 L TENSOR REMARK 3 L11: 2.6263 L22: 2.8184 REMARK 3 L33: 2.9221 L12: -0.6692 REMARK 3 L13: -0.0373 L23: 0.8516 REMARK 3 S TENSOR REMARK 3 S11: 0.1864 S12: -0.2201 S13: 0.5441 REMARK 3 S21: -0.1200 S22: 0.0063 S23: -0.2069 REMARK 3 S31: -0.9547 S32: 0.2635 S33: -0.0267 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 108 THROUGH 165 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.8641 16.6482 5.6356 REMARK 3 T TENSOR REMARK 3 T11: 0.1245 T22: 0.1092 REMARK 3 T33: 0.1001 T12: -0.0039 REMARK 3 T13: -0.0256 T23: -0.0215 REMARK 3 L TENSOR REMARK 3 L11: 1.2095 L22: 3.2044 REMARK 3 L33: 2.0479 L12: 0.7065 REMARK 3 L13: 0.0869 L23: 0.2453 REMARK 3 S TENSOR REMARK 3 S11: -0.1788 S12: 0.1559 S13: 0.0221 REMARK 3 S21: -0.3103 S22: 0.1644 S23: -0.0426 REMARK 3 S31: -0.2168 S32: -0.0815 S33: -0.0337 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 166 THROUGH 217 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.5202 27.0347 12.1319 REMARK 3 T TENSOR REMARK 3 T11: 0.2632 T22: 0.2114 REMARK 3 T33: 0.2552 T12: 0.0321 REMARK 3 T13: 0.0149 T23: -0.0499 REMARK 3 L TENSOR REMARK 3 L11: 2.3787 L22: 3.3377 REMARK 3 L33: 4.4498 L12: -0.0320 REMARK 3 L13: -0.8926 L23: 1.9149 REMARK 3 S TENSOR REMARK 3 S11: -0.0627 S12: -0.1648 S13: 0.0546 REMARK 3 S21: 0.3015 S22: -0.2562 S23: 0.5025 REMARK 3 S31: -0.2482 S32: -0.5822 S33: 0.2471 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 218 THROUGH 230 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.5089 16.4053 7.6573 REMARK 3 T TENSOR REMARK 3 T11: 0.3176 T22: 0.8245 REMARK 3 T33: 0.5361 T12: 0.1727 REMARK 3 T13: -0.0681 T23: 0.0024 REMARK 3 L TENSOR REMARK 3 L11: 5.4735 L22: 6.5302 REMARK 3 L33: 3.0965 L12: 0.0017 REMARK 3 L13: -0.1973 L23: 1.4908 REMARK 3 S TENSOR REMARK 3 S11: -0.0808 S12: 0.7589 S13: 0.1212 REMARK 3 S21: 0.3636 S22: 0.2357 S23: -1.2620 REMARK 3 S31: 0.1588 S32: 0.7204 S33: -0.1049 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: A REMARK 3 SELECTION : B REMARK 3 ATOM PAIRS NUMBER : 7934 REMARK 3 RMSD : 0.11 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4KT7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000079764. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : SI 111 CRYSTAL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32747 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 75.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 0.71000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, MLPHARE, HKL-3000, DM REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.0 SODIUM CHLORIDE, 0.1M BIS-TRISHCL, REMARK 280 PH 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 43.92900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 72.75450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.92900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 72.75450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: EXPERIMENTALLY UNKNOWN. THE CHAINS A AND B IS PREDICTED TO REMARK 300 FORM A DIMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -90.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 NA NA B 301 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 465 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 21 REMARK 465 SER A 22 REMARK 465 LYS A 23 REMARK 465 ILE A 24 REMARK 465 ASN A 25 REMARK 465 LYS A 26 REMARK 465 LYS A 231 REMARK 465 LYS A 232 REMARK 465 ASP A 233 REMARK 465 VAL A 234 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MSE B 1 REMARK 465 ILE B 2 REMARK 465 MSE B 20 REMARK 465 ARG B 21 REMARK 465 SER B 22 REMARK 465 LYS B 23 REMARK 465 ILE B 24 REMARK 465 ASN B 25 REMARK 465 LYS B 26 REMARK 465 PRO B 27 REMARK 465 TYR B 28 REMARK 465 LYS B 231 REMARK 465 LYS B 232 REMARK 465 ASP B 233 REMARK 465 VAL B 234 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 3 18.50 55.10 REMARK 500 SER A 82 -146.84 -130.58 REMARK 500 ARG A 110 77.99 -114.89 REMARK 500 GLN A 163 -154.34 -136.71 REMARK 500 SER B 82 -153.06 -138.77 REMARK 500 GLN B 163 -149.20 -137.32 REMARK 500 PHE B 197 41.87 -108.60 REMARK 500 ASP B 198 57.64 36.15 REMARK 500 THR B 216 -51.33 -124.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 301 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 466 O REMARK 620 2 ASP B 151 OD1 72.7 REMARK 620 3 HOH B 465 O 147.6 95.9 REMARK 620 4 HOH B 451 O 130.7 89.1 77.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC100369 RELATED DB: TARGETTRACK DBREF 4KT7 A 1 234 UNP C7RFG6 C7RFG6_ANAPD 1 234 DBREF 4KT7 B 1 234 UNP C7RFG6 C7RFG6_ANAPD 1 234 SEQADV 4KT7 SER A -2 UNP C7RFG6 EXPRESSION TAG SEQADV 4KT7 ASN A -1 UNP C7RFG6 EXPRESSION TAG SEQADV 4KT7 ALA A 0 UNP C7RFG6 EXPRESSION TAG SEQADV 4KT7 SER B -2 UNP C7RFG6 EXPRESSION TAG SEQADV 4KT7 ASN B -1 UNP C7RFG6 EXPRESSION TAG SEQADV 4KT7 ALA B 0 UNP C7RFG6 EXPRESSION TAG SEQRES 1 A 237 SER ASN ALA MSE ILE ASP GLY LYS PHE ILE SER ALA ILE SEQRES 2 A 237 ILE THR ALA ALA GLY SER GLY LEU ARG MSE ARG SER LYS SEQRES 3 A 237 ILE ASN LYS PRO TYR ILE GLU VAL GLY GLY ARG LYS VAL SEQRES 4 A 237 LEU GLU ILE THR LEU ASP THR VAL SER ARG VAL LYS GLU SEQRES 5 A 237 ILE ASP GLU ILE ILE LEU VAL ILE ARG LYS ASP ASP GLU SEQRES 6 A 237 ASP ILE ILE LYS ASP ILE LEU GLU LYS TYR ASP GLY ASN SEQRES 7 A 237 ILE ARG TYR VAL TYR GLY SER THR THR ARG GLU LEU SER SEQRES 8 A 237 THR PHE GLU GLY LEU LYS ALA LEU ASP PRO GLN SER GLU SEQRES 9 A 237 LEU VAL LEU THR HIS ASP GLY VAL ARG PRO PHE ALA SER SEQRES 10 A 237 GLU GLU LEU PHE LEU LYS THR ILE ASN ALA LEU ARG LYS SEQRES 11 A 237 ASN LYS ALA VAL ILE THR ALA THR LYS SER LYS ASP THR SEQRES 12 A 237 VAL LYS ILE ILE ASP ASP ASP MSE TYR VAL ASP PHE THR SEQRES 13 A 237 PRO ASN ARG ASP TYR VAL TYR ASN ILE GLN THR PRO GLN SEQRES 14 A 237 ALA PHE ASP LYS LYS LEU ILE TYR ALA MSE TYR GLU LYS SEQRES 15 A 237 TYR LEU ALA SER GLU PHE LYS VAL THR ASP ASP SER GLN SEQRES 16 A 237 LEU PHE GLU PHE PHE ASP ARG ASP GLU LYS VAL LYS VAL SEQRES 17 A 237 VAL HIS GLY GLU TYR SER ASN ILE LYS ILE THR THR GLN SEQRES 18 A 237 GLU ASP ILE ILE PHE ALA ASN ALA TYR LEU GLN ARG LYS SEQRES 19 A 237 LYS ASP VAL SEQRES 1 B 237 SER ASN ALA MSE ILE ASP GLY LYS PHE ILE SER ALA ILE SEQRES 2 B 237 ILE THR ALA ALA GLY SER GLY LEU ARG MSE ARG SER LYS SEQRES 3 B 237 ILE ASN LYS PRO TYR ILE GLU VAL GLY GLY ARG LYS VAL SEQRES 4 B 237 LEU GLU ILE THR LEU ASP THR VAL SER ARG VAL LYS GLU SEQRES 5 B 237 ILE ASP GLU ILE ILE LEU VAL ILE ARG LYS ASP ASP GLU SEQRES 6 B 237 ASP ILE ILE LYS ASP ILE LEU GLU LYS TYR ASP GLY ASN SEQRES 7 B 237 ILE ARG TYR VAL TYR GLY SER THR THR ARG GLU LEU SER SEQRES 8 B 237 THR PHE GLU GLY LEU LYS ALA LEU ASP PRO GLN SER GLU SEQRES 9 B 237 LEU VAL LEU THR HIS ASP GLY VAL ARG PRO PHE ALA SER SEQRES 10 B 237 GLU GLU LEU PHE LEU LYS THR ILE ASN ALA LEU ARG LYS SEQRES 11 B 237 ASN LYS ALA VAL ILE THR ALA THR LYS SER LYS ASP THR SEQRES 12 B 237 VAL LYS ILE ILE ASP ASP ASP MSE TYR VAL ASP PHE THR SEQRES 13 B 237 PRO ASN ARG ASP TYR VAL TYR ASN ILE GLN THR PRO GLN SEQRES 14 B 237 ALA PHE ASP LYS LYS LEU ILE TYR ALA MSE TYR GLU LYS SEQRES 15 B 237 TYR LEU ALA SER GLU PHE LYS VAL THR ASP ASP SER GLN SEQRES 16 B 237 LEU PHE GLU PHE PHE ASP ARG ASP GLU LYS VAL LYS VAL SEQRES 17 B 237 VAL HIS GLY GLU TYR SER ASN ILE LYS ILE THR THR GLN SEQRES 18 B 237 GLU ASP ILE ILE PHE ALA ASN ALA TYR LEU GLN ARG LYS SEQRES 19 B 237 LYS ASP VAL MODRES 4KT7 MSE A 1 MET SELENOMETHIONINE MODRES 4KT7 MSE A 20 MET SELENOMETHIONINE MODRES 4KT7 MSE A 148 MET SELENOMETHIONINE MODRES 4KT7 MSE A 176 MET SELENOMETHIONINE MODRES 4KT7 MSE B 148 MET SELENOMETHIONINE MODRES 4KT7 MSE B 176 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 20 8 HET MSE A 148 8 HET MSE A 176 8 HET MSE B 148 8 HET MSE B 176 8 HET CL A 301 1 HET NA B 301 1 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 CL CL 1- FORMUL 4 NA NA 1+ FORMUL 5 HOH *250(H2 O) HELIX 1 1 ASN A -1 ASP A 3 5 5 HELIX 2 2 VAL A 36 ARG A 46 1 11 HELIX 3 3 ASP A 61 LYS A 71 1 11 HELIX 4 4 THR A 84 ALA A 95 1 12 HELIX 5 5 SER A 114 LEU A 125 1 12 HELIX 6 6 ASN A 155 ASP A 157 5 3 HELIX 7 7 LYS A 170 ALA A 182 1 13 HELIX 8 8 ASP A 189 SER A 191 5 3 HELIX 9 9 GLN A 192 PHE A 197 1 6 HELIX 10 10 THR A 217 GLN A 229 1 13 HELIX 11 11 VAL B 36 VAL B 47 1 12 HELIX 12 12 ASP B 61 LEU B 69 1 9 HELIX 13 13 GLU B 70 TYR B 72 5 3 HELIX 14 14 THR B 84 LEU B 96 1 13 HELIX 15 15 SER B 114 ALA B 124 1 11 HELIX 16 16 LEU B 125 LYS B 127 5 3 HELIX 17 17 ASN B 155 ASP B 157 5 3 HELIX 18 18 LYS B 170 ALA B 182 1 13 HELIX 19 19 ASP B 189 SER B 191 5 3 HELIX 20 20 GLN B 192 PHE B 197 1 6 HELIX 21 21 THR B 217 ARG B 230 1 14 SHEET 1 A 7 ILE A 76 TYR A 80 0 SHEET 2 A 7 GLU A 52 ILE A 57 1 N LEU A 55 O ARG A 77 SHEET 3 A 7 ILE A 7 ALA A 13 1 N ALA A 9 O ILE A 54 SHEET 4 A 7 LEU A 102 ASP A 107 1 O LEU A 102 N SER A 8 SHEET 5 A 7 VAL A 159 ASP A 169 -1 O GLN A 166 N THR A 105 SHEET 6 A 7 ALA A 130 LYS A 136 -1 N THR A 135 O ASN A 161 SHEET 7 A 7 VAL A 203 HIS A 207 1 O LYS A 204 N ILE A 132 SHEET 1 B 7 ILE A 76 TYR A 80 0 SHEET 2 B 7 GLU A 52 ILE A 57 1 N LEU A 55 O ARG A 77 SHEET 3 B 7 ILE A 7 ALA A 13 1 N ALA A 9 O ILE A 54 SHEET 4 B 7 LEU A 102 ASP A 107 1 O LEU A 102 N SER A 8 SHEET 5 B 7 VAL A 159 ASP A 169 -1 O GLN A 166 N THR A 105 SHEET 6 B 7 VAL B 141 ILE B 144 -1 O LYS B 142 N TYR A 160 SHEET 7 B 7 VAL B 150 PHE B 152 -1 O ASP B 151 N ILE B 143 SHEET 1 C 2 GLU A 30 VAL A 31 0 SHEET 2 C 2 ARG A 34 LYS A 35 -1 O ARG A 34 N VAL A 31 SHEET 1 D 7 VAL A 150 PHE A 152 0 SHEET 2 D 7 VAL A 141 ILE A 144 -1 N ILE A 143 O ASP A 151 SHEET 3 D 7 VAL B 159 ASP B 169 -1 O TYR B 160 N LYS A 142 SHEET 4 D 7 LEU B 102 ASP B 107 -1 N THR B 105 O GLN B 166 SHEET 5 D 7 ILE B 7 ALA B 13 1 N SER B 8 O LEU B 104 SHEET 6 D 7 GLU B 52 ILE B 57 1 O ILE B 54 N ALA B 9 SHEET 7 D 7 ILE B 76 TYR B 80 1 O VAL B 79 N LEU B 55 SHEET 1 E 5 VAL A 150 PHE A 152 0 SHEET 2 E 5 VAL A 141 ILE A 144 -1 N ILE A 143 O ASP A 151 SHEET 3 E 5 VAL B 159 ASP B 169 -1 O TYR B 160 N LYS A 142 SHEET 4 E 5 ALA B 130 LYS B 136 -1 N THR B 135 O ASN B 161 SHEET 5 E 5 VAL B 203 HIS B 207 1 O VAL B 206 N ILE B 132 SHEET 1 F 2 GLU B 30 VAL B 31 0 SHEET 2 F 2 ARG B 34 LYS B 35 -1 O ARG B 34 N VAL B 31 LINK C ALA A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N ILE A 2 1555 1555 1.33 LINK C ARG A 19 N MSE A 20 1555 1555 1.33 LINK C ASP A 147 N MSE A 148 1555 1555 1.33 LINK C MSE A 148 N TYR A 149 1555 1555 1.33 LINK C ALA A 175 N MSE A 176 1555 1555 1.32 LINK C MSE A 176 N TYR A 177 1555 1555 1.33 LINK C ASP B 147 N MSE B 148 1555 1555 1.33 LINK C MSE B 148 N TYR B 149 1555 1555 1.33 LINK C ALA B 175 N MSE B 176 1555 1555 1.33 LINK C MSE B 176 N TYR B 177 1555 1555 1.33 LINK NA NA B 301 O HOH B 466 1555 1555 2.29 LINK OD1 ASP B 151 NA NA B 301 1555 1555 2.30 LINK NA NA B 301 O HOH B 465 1555 1555 2.31 LINK NA NA B 301 O HOH B 451 1555 1555 2.43 CISPEP 1 THR A 164 PRO A 165 0 13.59 CISPEP 2 THR B 164 PRO B 165 0 12.36 SITE 1 AC1 3 ASP A 151 ARG A 199 HOH A 484 SITE 1 AC2 4 ASP B 151 HOH B 451 HOH B 465 HOH B 466 CRYST1 87.858 145.509 36.719 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011382 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006872 0.000000 0.00000 SCALE3 0.000000 0.000000 0.027234 0.00000