HEADER UNKNOWN FUNCTION 22-MAY-13 4KV7 TITLE THE CRYSTAL STRUCTURE OF A POSSIBLE LEUCINE/ISOLEUCINE/VALINE-BINDING TITLE 2 PROTEIN FROM RHODOPIRELLULA BALTICA SH 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE LEUCINE/ISOLEUCINE/VALINE-BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOPIRELLULA BALTICA; SOURCE 3 ORGANISM_TAXID: 243090; SOURCE 4 STRAIN: SH 1; SOURCE 5 GENE: LIVK, RB7306; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PGROW7-K; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG73 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,J.MACK,M.ENDRES,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 2 06-NOV-24 4KV7 1 REMARK SEQADV LINK REVDAT 1 05-JUN-13 4KV7 0 JRNL AUTH K.TAN,J.MACK,M.ENDRES,A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF A POSSIBLE JRNL TITL 2 LEUCINE/ISOLEUCINE/VALINE-BINDING PROTEIN FROM JRNL TITL 3 RHODOPIRELLULA BALTICA SH 1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.75 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.7 REMARK 3 NUMBER OF REFLECTIONS : 105323 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.149 REMARK 3 R VALUE (WORKING SET) : 0.148 REMARK 3 FREE R VALUE : 0.163 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 5288 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 22.7562 - 3.7238 0.90 3188 165 0.1541 0.1464 REMARK 3 2 3.7238 - 2.9578 0.97 3467 174 0.1441 0.1527 REMARK 3 3 2.9578 - 2.5845 0.97 3478 174 0.1552 0.1860 REMARK 3 4 2.5845 - 2.3484 0.97 3418 198 0.1514 0.1768 REMARK 3 5 2.3484 - 2.1803 0.97 3479 175 0.1398 0.1435 REMARK 3 6 2.1803 - 2.0518 0.96 3449 183 0.1363 0.1660 REMARK 3 7 2.0518 - 1.9491 0.97 3414 189 0.1444 0.1650 REMARK 3 8 1.9491 - 1.8643 0.96 3430 197 0.1481 0.1651 REMARK 3 9 1.8643 - 1.7926 0.96 3367 196 0.1451 0.1692 REMARK 3 10 1.7926 - 1.7307 0.96 3403 183 0.1399 0.1574 REMARK 3 11 1.7307 - 1.6766 0.96 3436 172 0.1374 0.1472 REMARK 3 12 1.6766 - 1.6287 0.95 3345 192 0.1334 0.1531 REMARK 3 13 1.6287 - 1.5859 0.95 3412 165 0.1318 0.1519 REMARK 3 14 1.5859 - 1.5472 0.94 3396 176 0.1297 0.1684 REMARK 3 15 1.5472 - 1.5120 0.94 3354 177 0.1366 0.1447 REMARK 3 16 1.5120 - 1.4798 0.95 3315 193 0.1417 0.1460 REMARK 3 17 1.4798 - 1.4502 0.94 3351 171 0.1407 0.1653 REMARK 3 18 1.4502 - 1.4229 0.93 3331 170 0.1466 0.1579 REMARK 3 19 1.4229 - 1.3975 0.94 3306 200 0.1450 0.1571 REMARK 3 20 1.3975 - 1.3738 0.93 3342 161 0.1484 0.1564 REMARK 3 21 1.3738 - 1.3516 0.94 3326 159 0.1534 0.1735 REMARK 3 22 1.3516 - 1.3308 0.92 3293 158 0.1555 0.1561 REMARK 3 23 1.3308 - 1.3113 0.93 3311 182 0.1613 0.1942 REMARK 3 24 1.3113 - 1.2928 0.92 3283 177 0.1666 0.1836 REMARK 3 25 1.2928 - 1.2753 0.93 3332 157 0.1786 0.1988 REMARK 3 26 1.2753 - 1.2588 0.92 3198 184 0.1807 0.1950 REMARK 3 27 1.2588 - 1.2430 0.92 3304 186 0.1838 0.2259 REMARK 3 28 1.2430 - 1.2281 0.91 3201 162 0.1845 0.2030 REMARK 3 29 1.2281 - 1.2138 0.89 3227 153 0.1971 0.1834 REMARK 3 30 1.2138 - 1.2001 0.81 2879 159 0.2043 0.1978 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.090 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2914 REMARK 3 ANGLE : 1.122 3974 REMARK 3 CHIRALITY : 0.073 458 REMARK 3 PLANARITY : 0.005 521 REMARK 3 DIHEDRAL : 12.278 1083 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 42 THROUGH 63 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.2505 28.7019 26.3565 REMARK 3 T TENSOR REMARK 3 T11: 0.1849 T22: 0.1621 REMARK 3 T33: 0.1295 T12: -0.0032 REMARK 3 T13: -0.0373 T23: 0.0404 REMARK 3 L TENSOR REMARK 3 L11: 1.3934 L22: 1.2162 REMARK 3 L33: 1.3898 L12: -0.7163 REMARK 3 L13: 0.8384 L23: -0.5340 REMARK 3 S TENSOR REMARK 3 S11: 0.0004 S12: 0.3703 S13: 0.1868 REMARK 3 S21: -0.2531 S22: 0.0141 S23: 0.1006 REMARK 3 S31: -0.1622 S32: -0.0733 S33: -0.0317 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 64 THROUGH 112 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.8857 26.3007 32.3795 REMARK 3 T TENSOR REMARK 3 T11: 0.1011 T22: 0.0926 REMARK 3 T33: 0.1092 T12: 0.0042 REMARK 3 T13: -0.0197 T23: 0.0053 REMARK 3 L TENSOR REMARK 3 L11: 1.0707 L22: 1.9311 REMARK 3 L33: 1.4620 L12: 0.3108 REMARK 3 L13: -0.0869 L23: -0.3264 REMARK 3 S TENSOR REMARK 3 S11: -0.0010 S12: 0.1310 S13: 0.1059 REMARK 3 S21: -0.1858 S22: 0.0432 S23: 0.1239 REMARK 3 S31: -0.1273 S32: -0.0375 S33: -0.0512 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 113 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.4358 15.7870 28.9373 REMARK 3 T TENSOR REMARK 3 T11: 0.1342 T22: 0.1115 REMARK 3 T33: 0.0898 T12: -0.0073 REMARK 3 T13: -0.0052 T23: -0.0245 REMARK 3 L TENSOR REMARK 3 L11: 1.4470 L22: 1.5954 REMARK 3 L33: 2.1966 L12: -0.1826 REMARK 3 L13: 0.2793 L23: -0.6363 REMARK 3 S TENSOR REMARK 3 S11: 0.0259 S12: 0.2555 S13: -0.1269 REMARK 3 S21: -0.2667 S22: 0.0175 S23: 0.0658 REMARK 3 S31: 0.1582 S32: -0.0087 S33: -0.0432 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 156 THROUGH 185 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.4163 16.0015 43.3414 REMARK 3 T TENSOR REMARK 3 T11: 0.0601 T22: 0.0553 REMARK 3 T33: 0.0760 T12: 0.0055 REMARK 3 T13: 0.0102 T23: -0.0150 REMARK 3 L TENSOR REMARK 3 L11: 2.0866 L22: 1.1882 REMARK 3 L33: 2.7987 L12: -0.4840 REMARK 3 L13: 1.1507 L23: -1.4623 REMARK 3 S TENSOR REMARK 3 S11: 0.0436 S12: 0.0661 S13: -0.0675 REMARK 3 S21: -0.0777 S22: -0.0344 S23: -0.0585 REMARK 3 S31: 0.1214 S32: 0.1408 S33: -0.0350 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 186 THROUGH 236 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.7902 5.1497 52.2519 REMARK 3 T TENSOR REMARK 3 T11: 0.0896 T22: 0.0820 REMARK 3 T33: 0.1103 T12: 0.0097 REMARK 3 T13: 0.0051 T23: 0.0179 REMARK 3 L TENSOR REMARK 3 L11: 2.1245 L22: 0.8479 REMARK 3 L33: 1.0025 L12: 0.0282 REMARK 3 L13: 0.1099 L23: -0.1130 REMARK 3 S TENSOR REMARK 3 S11: -0.0291 S12: -0.1380 S13: -0.2486 REMARK 3 S21: 0.0285 S22: 0.0279 S23: -0.0253 REMARK 3 S31: 0.0601 S32: 0.0711 S33: -0.0271 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 237 THROUGH 297 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.0523 12.2933 59.8393 REMARK 3 T TENSOR REMARK 3 T11: 0.1328 T22: 0.1809 REMARK 3 T33: 0.0973 T12: 0.0175 REMARK 3 T13: 0.0250 T23: 0.0253 REMARK 3 L TENSOR REMARK 3 L11: 1.5687 L22: 1.1883 REMARK 3 L33: 1.3256 L12: 0.0011 REMARK 3 L13: 0.1459 L23: -0.5949 REMARK 3 S TENSOR REMARK 3 S11: -0.0270 S12: -0.4510 S13: -0.1375 REMARK 3 S21: 0.2808 S22: 0.0983 S23: 0.1610 REMARK 3 S31: -0.0380 S32: -0.0924 S33: -0.0381 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 298 THROUGH 372 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.4441 31.6379 37.5591 REMARK 3 T TENSOR REMARK 3 T11: 0.0937 T22: 0.0685 REMARK 3 T33: 0.1049 T12: -0.0121 REMARK 3 T13: 0.0036 T23: 0.0046 REMARK 3 L TENSOR REMARK 3 L11: 0.8748 L22: 0.8547 REMARK 3 L33: 0.9078 L12: -0.0651 REMARK 3 L13: 0.0782 L23: -0.1197 REMARK 3 S TENSOR REMARK 3 S11: -0.0078 S12: 0.0654 S13: 0.1595 REMARK 3 S21: -0.0623 S22: -0.0166 S23: -0.0206 REMARK 3 S31: -0.0664 S32: 0.0449 S33: 0.0201 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 373 THROUGH 393 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.3607 25.5617 35.5660 REMARK 3 T TENSOR REMARK 3 T11: 0.1174 T22: 0.1479 REMARK 3 T33: 0.1329 T12: -0.0131 REMARK 3 T13: 0.0179 T23: -0.0039 REMARK 3 L TENSOR REMARK 3 L11: 2.2867 L22: 2.5441 REMARK 3 L33: 2.3724 L12: -0.4151 REMARK 3 L13: -0.2909 L23: -0.8069 REMARK 3 S TENSOR REMARK 3 S11: 0.0064 S12: 0.0808 S13: 0.1604 REMARK 3 S21: -0.1288 S22: 0.0327 S23: -0.2423 REMARK 3 S31: -0.0882 S32: 0.1626 S33: -0.0457 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 394 THROUGH 413 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.4190 26.0897 58.3677 REMARK 3 T TENSOR REMARK 3 T11: 0.1839 T22: 0.1495 REMARK 3 T33: 0.1433 T12: -0.0130 REMARK 3 T13: -0.0181 T23: -0.0550 REMARK 3 L TENSOR REMARK 3 L11: 4.3233 L22: 3.7630 REMARK 3 L33: 3.2794 L12: -0.6313 REMARK 3 L13: -0.0216 L23: -0.5687 REMARK 3 S TENSOR REMARK 3 S11: -0.0178 S12: -0.5291 S13: 0.2260 REMARK 3 S21: 0.5515 S22: 0.0796 S23: -0.1576 REMARK 3 S31: -0.2542 S32: 0.0951 S33: -0.0818 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4KV7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000079835. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-DEC-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97895 REMARK 200 MONOCHROMATOR : SI 111 CRYSTAL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 105324 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.200 REMARK 200 RESOLUTION RANGE LOW (A) : 22.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.8 REMARK 200 DATA REDUNDANCY : 1.900 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 27.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.7 REMARK 200 DATA REDUNDANCY IN SHELL : 1.60 REMARK 200 R MERGE FOR SHELL (I) : 0.24200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, MLPHARE, HKL-3000, DM REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.15M DL-MALIC ACID, 20%(W/V) PEG3350, REMARK 280 PH 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: EXPERIMENTALLY UNKNOWN. IT IS PREDICTED TO BE A MONOMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 34 REMARK 465 ASN A 35 REMARK 465 ALA A 36 REMARK 465 ALA A 37 REMARK 465 PRO A 38 REMARK 465 LYS A 39 REMARK 465 SER A 40 REMARK 465 LEU A 41 REMARK 465 THR A 158 REMARK 465 GLU A 159 REMARK 465 SER A 160 REMARK 465 GLU A 414 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 157 CE NZ REMARK 470 GLN A 368 CD OE1 NE2 REMARK 470 GLU A 409 OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS A 264 O HOH A 1102 1455 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 115 -86.26 -88.02 REMARK 500 THR A 150 130.69 -173.65 REMARK 500 ASP A 199 -166.92 -163.87 REMARK 500 VAL A 256 77.20 -113.43 REMARK 500 ASP A 327 100.69 -164.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC110939 RELATED DB: TARGETTRACK DBREF 4KV7 A 36 414 UNP Q7UNW4 Q7UNW4_RHOBA 36 414 SEQADV 4KV7 SER A 34 UNP Q7UNW4 EXPRESSION TAG SEQADV 4KV7 ASN A 35 UNP Q7UNW4 EXPRESSION TAG SEQADV 4KV7 SER A 402 UNP Q7UNW4 GLY 402 ENGINEERED MUTATION SEQRES 1 A 381 SER ASN ALA ALA PRO LYS SER LEU ASP ALA THR PRO VAL SEQRES 2 A 381 ASP ALA GLN LEU LEU LYS PHE GLY MSE SER THR ALA LEU SEQRES 3 A 381 SER GLY PRO ALA ALA GLU LEU GLY ILE ASN MSE ARG HIS SEQRES 4 A 381 GLY ILE LEU ALA ALA PHE ASP GLU ALA LYS ALA LYS ASN SEQRES 5 A 381 HIS LEU PRO SER LYS THR LEU LYS LEU ILE ALA LEU ASP SEQRES 6 A 381 ASP GLY TYR GLU PRO ALA ARG THR ALA PRO ASN MSE HIS SEQRES 7 A 381 ARG LEU THR ASP GLU HIS GLU VAL LEU ALA VAL VAL GLY SEQRES 8 A 381 ASN VAL GLY THR PRO THR ALA ILE THR ALA ILE PRO ILE SEQRES 9 A 381 ALA GLN GLN THR LYS THR PRO PHE PHE GLY ALA PHE THR SEQRES 10 A 381 GLY ALA SER ALA LEU ARG LYS THR GLU SER VAL GLU PHE SEQRES 11 A 381 VAL ILE ASN TYR ARG ALA SER TYR ALA GLU GLU THR ALA SEQRES 12 A 381 ALA MSE VAL ASP ALA LEU VAL ALA LYS GLY ILE LYS PRO SEQRES 13 A 381 GLU GLU ILE GLY PHE PHE THR GLN ASN ASP SER TYR GLY SEQRES 14 A 381 ASP ASP GLY PHE PHE GLY GLY LEU ALA ALA ILE ARG ARG SEQRES 15 A 381 HIS GLN SER VAL LYS VAL SER SER LEU PRO HIS GLY ARG SEQRES 16 A 381 TYR ARG ARG ASN THR SER GLN VAL GLU ASP GLY LEU ALA SEQRES 17 A 381 ASP LEU LEU MSE HIS GLN PRO LEU PRO LYS ALA VAL ILE SEQRES 18 A 381 MSE VAL GLY THR TYR GLU PRO CYS SER LYS LEU ILE ARG SEQRES 19 A 381 MSE ALA ARG MSE ASN ASN PHE ASN PRO GLN PHE LEU ALA SEQRES 20 A 381 VAL SER PHE VAL GLY ALA ASP ALA LEU GLN ARG SER LEU SEQRES 21 A 381 GLY ASP LEU ALA ASN GLY ILE VAL ALA THR GLN VAL VAL SEQRES 22 A 381 PRO HIS PHE ASP SER ASP LEU PRO LEU VAL ARG GLU TYR SEQRES 23 A 381 ARG ASP ALA MSE ARG ASP TYR ASP PRO GLU LEU PRO LEU SEQRES 24 A 381 SER PHE VAL SER LEU GLU GLY TYR ILE VAL GLY ARG ILE SEQRES 25 A 381 LEU VAL LYS ALA VAL THR SER ILE LYS GLY GLU ILE SER SEQRES 26 A 381 ARG SER SER ILE ALA ALA ALA LEU GLU GLN LEU GLY GLN SEQRES 27 A 381 PHE ASP ILE GLY LEU GLY ALA PRO LEU THR LEU GLY PRO SEQRES 28 A 381 ASN ASP HIS GLN ALA SER SER LYS VAL TRP PRO VAL LEU SEQRES 29 A 381 ILE GLY ALA ASP SER SER GLN SER LEU ALA TRP GLU GLU SEQRES 30 A 381 LEU LEU SER GLU MODRES 4KV7 MSE A 55 MET SELENOMETHIONINE MODRES 4KV7 MSE A 70 MET SELENOMETHIONINE MODRES 4KV7 MSE A 110 MET SELENOMETHIONINE MODRES 4KV7 MSE A 178 MET SELENOMETHIONINE MODRES 4KV7 MSE A 245 MET SELENOMETHIONINE MODRES 4KV7 MSE A 255 MET SELENOMETHIONINE MODRES 4KV7 MSE A 268 MET SELENOMETHIONINE MODRES 4KV7 MSE A 271 MET SELENOMETHIONINE MODRES 4KV7 MSE A 323 MET SELENOMETHIONINE HET MSE A 55 8 HET MSE A 70 8 HET MSE A 110 8 HET MSE A 178 8 HET MSE A 245 8 HET MSE A 255 8 HET MSE A 268 8 HET MSE A 271 8 HET MSE A 323 8 HET FMT A 501 3 HETNAM MSE SELENOMETHIONINE HETNAM FMT FORMIC ACID FORMUL 1 MSE 9(C5 H11 N O2 SE) FORMUL 2 FMT C H2 O2 FORMUL 3 HOH *572(H2 O) HELIX 1 1 ALA A 63 LYS A 84 1 22 HELIX 2 2 GLU A 102 ASP A 115 1 14 HELIX 3 3 GLY A 127 THR A 141 1 15 HELIX 4 4 ALA A 152 ARG A 156 5 5 HELIX 5 5 SER A 170 LYS A 185 1 16 HELIX 6 6 LYS A 188 GLU A 190 5 3 HELIX 7 7 ASP A 199 GLN A 217 1 19 HELIX 8 8 LYS A 220 LEU A 224 5 5 HELIX 9 9 VAL A 236 MSE A 245 1 10 HELIX 10 10 THR A 258 ASN A 272 1 15 HELIX 11 11 SER A 282 VAL A 284 5 3 HELIX 12 12 GLY A 285 GLY A 294 1 10 HELIX 13 13 ASP A 295 ASN A 298 5 4 HELIX 14 14 LEU A 313 ASP A 327 1 15 HELIX 15 15 SER A 333 ILE A 353 1 21 HELIX 16 16 SER A 358 LEU A 369 1 12 HELIX 17 17 ALA A 407 LEU A 411 5 5 SHEET 1 A 2 GLN A 49 THR A 57 0 SHEET 2 A 2 LYS A 90 ASP A 98 1 O THR A 91 N LEU A 51 SHEET 1 B 3 VAL A 122 VAL A 123 0 SHEET 2 B 3 PHE A 145 PHE A 146 1 O PHE A 146 N VAL A 122 SHEET 3 B 3 VAL A 164 ILE A 165 1 O ILE A 165 N PHE A 145 SHEET 1 C 7 HIS A 226 TYR A 229 0 SHEET 2 C 7 ILE A 192 GLN A 197 1 N THR A 196 O GLY A 227 SHEET 3 C 7 ALA A 252 VAL A 256 1 O ALA A 252 N GLY A 193 SHEET 4 C 7 GLN A 277 ALA A 280 1 O LEU A 279 N MSE A 255 SHEET 5 C 7 VAL A 301 GLN A 304 1 O VAL A 301 N ALA A 280 SHEET 6 C 7 TRP A 394 ILE A 398 -1 O TRP A 394 N GLN A 304 SHEET 7 C 7 SER A 403 SER A 405 -1 O GLN A 404 N LEU A 397 SHEET 1 D 2 GLY A 370 PHE A 372 0 SHEET 2 D 2 LEU A 380 LEU A 382 -1 O LEU A 380 N PHE A 372 LINK C GLY A 54 N MSE A 55 1555 1555 1.33 LINK C MSE A 55 N SER A 56 1555 1555 1.33 LINK C ASN A 69 N MSE A 70 1555 1555 1.33 LINK C MSE A 70 N ARG A 71 1555 1555 1.33 LINK C ASN A 109 N MSE A 110 1555 1555 1.33 LINK C MSE A 110 N HIS A 111 1555 1555 1.33 LINK C ALA A 177 N MSE A 178 1555 1555 1.33 LINK C MSE A 178 N VAL A 179 1555 1555 1.33 LINK C LEU A 244 N MSE A 245 1555 1555 1.33 LINK C MSE A 245 N HIS A 246 1555 1555 1.33 LINK C ILE A 254 N MSE A 255 1555 1555 1.33 LINK C MSE A 255 N VAL A 256 1555 1555 1.33 LINK C ARG A 267 N MSE A 268 1555 1555 1.33 LINK C MSE A 268 N ALA A 269 1555 1555 1.32 LINK C ARG A 270 N MSE A 271 1555 1555 1.33 LINK C MSE A 271 N ASN A 272 1555 1555 1.33 LINK C ALA A 322 N MSE A 323 1555 1555 1.33 LINK C MSE A 323 N ARG A 324 1555 1555 1.33 CISPEP 1 GLN A 247 PRO A 248 0 1.36 SITE 1 AC1 8 TYR A 101 GLY A 127 THR A 128 PRO A 129 SITE 2 AC1 8 THR A 150 TYR A 171 TYR A 201 PHE A 283 CRYST1 37.984 44.483 57.913 76.22 88.65 77.54 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026327 -0.005816 0.000791 0.00000 SCALE2 0.000000 0.023023 -0.005663 0.00000 SCALE3 0.000000 0.000000 0.017787 0.00000