HEADER FLUORESCENT PROTEIN 23-MAY-13 4KW4 TITLE CRYSTAL STRUCTURE OF GREEN FLUORESCENT PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: GREEN FLUORESCENT PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 OTHER_DETAILS: THE PROTEIN IN THIS STRUCTURE IS A VERSION OF GFP COMPND 7 CALLED EMERALD GFP SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AEQUOREA VICTORIA; SOURCE 3 ORGANISM_COMMON: JELLYFISH; SOURCE 4 ORGANISM_TAXID: 6100; SOURCE 5 GENE: GFP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS BETA BARREL, FLUORESCENT PROTEIN, CHROMOPHORE EXPDTA X-RAY DIFFRACTION AUTHOR T.J.BARNARD,X.YU,N.NOINAJ,J.W.TARASKA REVDAT 2 21-DEC-22 4KW4 1 SEQADV LINK REVDAT 1 09-APR-14 4KW4 0 JRNL AUTH T.J.BARNARD,X.YU,N.NOINAJ,J.W.TARASKA JRNL TITL CRYSTAL STRUCTURE OF GREEN FLUORESCENT PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.05 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 31868 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.280 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 23.0563 - 4.2001 1.00 2324 156 0.1575 0.1778 REMARK 3 2 4.2001 - 3.3370 1.00 2191 146 0.1431 0.1788 REMARK 3 3 3.3370 - 2.9161 1.00 2155 144 0.1502 0.1811 REMARK 3 4 2.9161 - 2.6499 1.00 2150 144 0.1701 0.1971 REMARK 3 5 2.6499 - 2.4602 1.00 2138 144 0.1570 0.2243 REMARK 3 6 2.4602 - 2.3153 1.00 2134 143 0.1630 0.2033 REMARK 3 7 2.3153 - 2.1995 1.00 2110 141 0.1675 0.2273 REMARK 3 8 2.1995 - 2.1038 1.00 2104 141 0.1639 0.2313 REMARK 3 9 2.1038 - 2.0228 1.00 2100 141 0.1793 0.2297 REMARK 3 10 2.0228 - 1.9531 1.00 2120 141 0.1938 0.2131 REMARK 3 11 1.9531 - 1.8920 1.00 2088 140 0.2226 0.2224 REMARK 3 12 1.8920 - 1.8380 1.00 2097 140 0.2489 0.2530 REMARK 3 13 1.8380 - 1.7896 1.00 2087 141 0.2680 0.3011 REMARK 3 14 1.7896 - 1.7460 1.00 2070 138 0.3050 0.3455 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.680 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 1928 REMARK 3 ANGLE : 1.399 2631 REMARK 3 CHIRALITY : 0.081 284 REMARK 3 PLANARITY : 0.006 348 REMARK 3 DIHEDRAL : 14.575 707 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.8131 34.8751 10.6333 REMARK 3 T TENSOR REMARK 3 T11: 0.1659 T22: 0.2248 REMARK 3 T33: 0.1561 T12: -0.0588 REMARK 3 T13: 0.0471 T23: -0.0606 REMARK 3 L TENSOR REMARK 3 L11: 6.9422 L22: 0.9654 REMARK 3 L33: 1.2153 L12: 1.4834 REMARK 3 L13: -0.6529 L23: -0.0309 REMARK 3 S TENSOR REMARK 3 S11: 0.1399 S12: -0.0676 S13: -0.0329 REMARK 3 S21: 0.0429 S22: 0.0313 S23: -0.0186 REMARK 3 S31: -0.1517 S32: 0.1419 S33: -0.1594 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 25 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.8511 41.3592 5.1179 REMARK 3 T TENSOR REMARK 3 T11: 0.2276 T22: 0.1802 REMARK 3 T33: 0.1739 T12: -0.0837 REMARK 3 T13: 0.0497 T23: -0.0546 REMARK 3 L TENSOR REMARK 3 L11: 2.0235 L22: 2.5201 REMARK 3 L33: 1.5618 L12: 1.3662 REMARK 3 L13: 0.0986 L23: 0.5919 REMARK 3 S TENSOR REMARK 3 S11: 0.0724 S12: 0.0104 S13: 0.2630 REMARK 3 S21: -0.0952 S22: 0.0666 S23: 0.0649 REMARK 3 S31: -0.5582 S32: 0.2005 S33: -0.0565 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 69 THROUGH 81 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.3023 21.3211 1.2920 REMARK 3 T TENSOR REMARK 3 T11: 0.1193 T22: 0.1521 REMARK 3 T33: 0.1664 T12: -0.0459 REMARK 3 T13: -0.0254 T23: 0.0217 REMARK 3 L TENSOR REMARK 3 L11: 1.6696 L22: 5.6767 REMARK 3 L33: 2.5332 L12: 1.5808 REMARK 3 L13: 0.5822 L23: 2.1659 REMARK 3 S TENSOR REMARK 3 S11: 0.0439 S12: -0.1210 S13: -0.1196 REMARK 3 S21: 0.0898 S22: -0.0393 S23: 0.4711 REMARK 3 S31: 0.2803 S32: -0.5372 S33: 0.0129 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 82 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.5488 30.8642 10.1624 REMARK 3 T TENSOR REMARK 3 T11: 0.1210 T22: 0.2715 REMARK 3 T33: 0.1466 T12: -0.0333 REMARK 3 T13: -0.0008 T23: -0.0825 REMARK 3 L TENSOR REMARK 3 L11: 1.1908 L22: 1.0013 REMARK 3 L33: 0.6352 L12: 0.6221 REMARK 3 L13: 0.4139 L23: 0.0700 REMARK 3 S TENSOR REMARK 3 S11: 0.1092 S12: -0.1426 S13: 0.0047 REMARK 3 S21: 0.1590 S22: 0.1229 S23: -0.1214 REMARK 3 S31: 0.1274 S32: 0.4535 S33: -0.1501 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 129 THROUGH 147 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.6845 42.0788 -4.9024 REMARK 3 T TENSOR REMARK 3 T11: 0.3275 T22: 0.5590 REMARK 3 T33: 0.2898 T12: -0.3814 REMARK 3 T13: 0.1150 T23: -0.0850 REMARK 3 L TENSOR REMARK 3 L11: 0.4808 L22: 0.3889 REMARK 3 L33: 0.3938 L12: 0.0409 REMARK 3 L13: 0.4292 L23: 0.0646 REMARK 3 S TENSOR REMARK 3 S11: 0.0938 S12: 0.2377 S13: 0.1269 REMARK 3 S21: -0.0993 S22: 0.1807 S23: -0.3286 REMARK 3 S31: -0.5701 S32: 0.7063 S33: 0.3214 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 148 THROUGH 170 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.5753 23.0041 0.0983 REMARK 3 T TENSOR REMARK 3 T11: 0.1403 T22: 0.1898 REMARK 3 T33: 0.1738 T12: 0.0328 REMARK 3 T13: -0.0524 T23: -0.0755 REMARK 3 L TENSOR REMARK 3 L11: 1.8710 L22: 6.2596 REMARK 3 L33: 3.0751 L12: 2.0227 REMARK 3 L13: -1.3353 L23: -2.7467 REMARK 3 S TENSOR REMARK 3 S11: 0.0025 S12: 0.0609 S13: -0.2071 REMARK 3 S21: 0.1030 S22: 0.0194 S23: -0.4026 REMARK 3 S31: 0.1013 S32: 0.3749 S33: 0.0149 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 171 THROUGH 187 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.4979 30.8766 -1.8321 REMARK 3 T TENSOR REMARK 3 T11: 0.1772 T22: 0.3548 REMARK 3 T33: 0.1539 T12: -0.0510 REMARK 3 T13: 0.0049 T23: -0.1128 REMARK 3 L TENSOR REMARK 3 L11: 1.8902 L22: 0.7366 REMARK 3 L33: 1.0021 L12: -0.2206 REMARK 3 L13: -0.6204 L23: 0.8338 REMARK 3 S TENSOR REMARK 3 S11: 0.1094 S12: 0.1781 S13: -0.1195 REMARK 3 S21: -0.0944 S22: 0.0897 S23: -0.3348 REMARK 3 S31: -0.1789 S32: 0.7668 S33: -0.0762 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 188 THROUGH 231 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.1885 32.1855 1.0626 REMARK 3 T TENSOR REMARK 3 T11: 0.1989 T22: 0.1305 REMARK 3 T33: 0.1266 T12: -0.0554 REMARK 3 T13: 0.0165 T23: -0.0149 REMARK 3 L TENSOR REMARK 3 L11: 1.2240 L22: 1.2152 REMARK 3 L33: 1.8489 L12: 0.1500 REMARK 3 L13: 0.3857 L23: 0.6047 REMARK 3 S TENSOR REMARK 3 S11: 0.2021 S12: -0.1131 S13: 0.0922 REMARK 3 S21: 0.2790 S22: -0.2053 S23: 0.1237 REMARK 3 S31: -0.1936 S32: -0.0112 S33: -0.0317 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4KW4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JUN-13. REMARK 100 THE DEPOSITION ID IS D_1000079868. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-AUG-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31923 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.746 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 8.300 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.20 REMARK 200 R MERGE FOR SHELL (I) : 0.82200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.0 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM HEPES PH 8.2, 50 MM MGCL2, 22% REMARK 280 PEG4000, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.98650 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 36.45200 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 36.45200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.49325 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 36.45200 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 36.45200 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 85.47975 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 36.45200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 36.45200 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 28.49325 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 36.45200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 36.45200 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 85.47975 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 56.98650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 MET A 0 REMARK 465 VAL A 1 REMARK 465 GLY A 232 REMARK 465 MET A 233 REMARK 465 ASP A 234 REMARK 465 GLU A 235 REMARK 465 LEU A 236 REMARK 465 TYR A 237 REMARK 465 LYS A 238 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 3 CD CE NZ REMARK 470 GLU A 5 CD OE1 OE2 REMARK 470 GLU A 6 CD OE1 OE2 REMARK 470 LYS A 52 CE NZ REMARK 470 LYS A 107 CE NZ REMARK 470 LYS A 113 CE NZ REMARK 470 LYS A 131 NZ REMARK 470 GLU A 132 CG CD OE1 OE2 REMARK 470 LYS A 158 NZ REMARK 470 LYS A 162 NZ REMARK 470 LYS A 166 CD CE NZ REMARK 470 GLU A 172 CG CD OE1 OE2 REMARK 470 LEU A 178 CG CD1 CD2 REMARK 470 GLN A 184 CD OE1 NE2 REMARK 470 LYS A 206 CE NZ REMARK 470 LYS A 214 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD1 HIS A 204 O HOH A 373 1.46 REMARK 500 O HOH A 459 O HOH A 539 2.19 REMARK 500 O HOH A 386 O HOH A 416 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU A 115 HE2 HIS A 204 3555 1.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4KW8 RELATED DB: PDB REMARK 900 RELATED ID: 4KW9 RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 EMERALD GFP HAS LEU AT POSITION 64, THR AT 65, ALA AT 72, LYS AT REMARK 999 149, THR AT 153, 167, LEU AT 231. RESIDUES THR 65, TYR 66, GLY 67 REMARK 999 FORM A CHROMOPHORE CRO 66 DBREF 4KW4 A 2 238 UNP P42212 GFP_AEQVI 2 238 SEQADV 4KW4 GLY A -2 UNP P42212 EXPRESSION TAG SEQADV 4KW4 SER A -1 UNP P42212 EXPRESSION TAG SEQADV 4KW4 MET A 0 UNP P42212 EXPRESSION TAG SEQADV 4KW4 VAL A 1 UNP P42212 EXPRESSION TAG SEQADV 4KW4 LEU A 64 UNP P42212 PHE 64 SEE REMARK 999 SEQADV 4KW4 CRO A 66 UNP P42212 SER 65 CHROMOPHORE SEQADV 4KW4 CRO A 66 UNP P42212 TYR 66 CHROMOPHORE SEQADV 4KW4 CRO A 66 UNP P42212 GLY 67 CHROMOPHORE SEQADV 4KW4 ALA A 72 UNP P42212 SER 72 SEE REMARK 999 SEQADV 4KW4 HIS A 147 UNP P42212 SER 147 ENGINEERED MUTATION SEQADV 4KW4 LYS A 149 UNP P42212 ASN 149 SEE REMARK 999 SEQADV 4KW4 THR A 153 UNP P42212 MET 153 SEE REMARK 999 SEQADV 4KW4 THR A 167 UNP P42212 ILE 167 SEE REMARK 999 SEQADV 4KW4 HIS A 202 UNP P42212 SER 202 ENGINEERED MUTATION SEQADV 4KW4 HIS A 204 UNP P42212 GLN 204 ENGINEERED MUTATION SEQADV 4KW4 LYS A 206 UNP P42212 ALA 206 ENGINEERED MUTATION SEQADV 4KW4 LEU A 231 UNP P42212 HIS 231 SEE REMARK 999 SEQRES 1 A 239 GLY SER MET VAL SER LYS GLY GLU GLU LEU PHE THR GLY SEQRES 2 A 239 VAL VAL PRO ILE LEU VAL GLU LEU ASP GLY ASP VAL ASN SEQRES 3 A 239 GLY HIS LYS PHE SER VAL SER GLY GLU GLY GLU GLY ASP SEQRES 4 A 239 ALA THR TYR GLY LYS LEU THR LEU LYS PHE ILE CYS THR SEQRES 5 A 239 THR GLY LYS LEU PRO VAL PRO TRP PRO THR LEU VAL THR SEQRES 6 A 239 THR LEU CRO VAL GLN CYS PHE ALA ARG TYR PRO ASP HIS SEQRES 7 A 239 MET LYS GLN HIS ASP PHE PHE LYS SER ALA MET PRO GLU SEQRES 8 A 239 GLY TYR VAL GLN GLU ARG THR ILE PHE PHE LYS ASP ASP SEQRES 9 A 239 GLY ASN TYR LYS THR ARG ALA GLU VAL LYS PHE GLU GLY SEQRES 10 A 239 ASP THR LEU VAL ASN ARG ILE GLU LEU LYS GLY ILE ASP SEQRES 11 A 239 PHE LYS GLU ASP GLY ASN ILE LEU GLY HIS LYS LEU GLU SEQRES 12 A 239 TYR ASN TYR ASN HIS HIS LYS VAL TYR ILE THR ALA ASP SEQRES 13 A 239 LYS GLN LYS ASN GLY ILE LYS VAL ASN PHE LYS THR ARG SEQRES 14 A 239 HIS ASN ILE GLU ASP GLY SER VAL GLN LEU ALA ASP HIS SEQRES 15 A 239 TYR GLN GLN ASN THR PRO ILE GLY ASP GLY PRO VAL LEU SEQRES 16 A 239 LEU PRO ASP ASN HIS TYR LEU HIS THR HIS SER LYS LEU SEQRES 17 A 239 SER LYS ASP PRO ASN GLU LYS ARG ASP HIS MET VAL LEU SEQRES 18 A 239 LEU GLU PHE VAL THR ALA ALA GLY ILE THR LEU GLY MET SEQRES 19 A 239 ASP GLU LEU TYR LYS MODRES 4KW4 CRO A 66 GLY MODRES 4KW4 CRO A 66 TYR MODRES 4KW4 CRO A 66 GLY HET CRO A 66 22 HETNAM CRO {2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(4- HETNAM 2 CRO HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1- HETNAM 3 CRO YL}ACETIC ACID HETSYN CRO PEPTIDE DERIVED CHROMOPHORE FORMUL 1 CRO C15 H17 N3 O5 FORMUL 2 HOH *303(H2 O) HELIX 1 1 LYS A 3 THR A 9 5 7 HELIX 2 2 PRO A 56 VAL A 61 5 6 HELIX 3 3 VAL A 68 ALA A 72 5 5 HELIX 4 4 PRO A 75 HIS A 81 5 7 HELIX 5 5 ASP A 82 ALA A 87 1 6 HELIX 6 6 LYS A 156 ASN A 159 5 4 SHEET 1 A12 VAL A 11 VAL A 22 0 SHEET 2 A12 HIS A 25 ASP A 36 -1 O GLY A 31 N VAL A 16 SHEET 3 A12 LYS A 41 CYS A 48 -1 O LYS A 41 N ASP A 36 SHEET 4 A12 HIS A 217 ALA A 227 -1 O LEU A 220 N LEU A 44 SHEET 5 A12 HIS A 199 SER A 208 -1 N HIS A 202 O THR A 225 SHEET 6 A12 HIS A 147 ASP A 155 -1 N ILE A 152 O HIS A 199 SHEET 7 A12 GLY A 160 ASN A 170 -1 O GLY A 160 N ASP A 155 SHEET 8 A12 VAL A 176 PRO A 187 -1 O HIS A 181 N PHE A 165 SHEET 9 A12 TYR A 92 PHE A 100 -1 N GLU A 95 O GLN A 184 SHEET 10 A12 ASN A 105 GLU A 115 -1 O TYR A 106 N ILE A 98 SHEET 11 A12 THR A 118 ILE A 128 -1 O VAL A 120 N LYS A 113 SHEET 12 A12 VAL A 11 VAL A 22 1 N ASP A 21 O GLY A 127 LINK C LEU A 64 N1 CRO A 66 1555 1555 1.33 LINK C3 CRO A 66 N VAL A 68 1555 1555 1.35 CISPEP 1 MET A 88 PRO A 89 0 6.13 CRYST1 72.904 72.904 113.973 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013717 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013717 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008774 0.00000