HEADER DE NOVO PROTEIN 29-MAY-13 4KYV TITLE CRYSTAL STRUCTURE OF DEHALOGENASE HALOTAG2 WITH HALTS AT THE TITLE 2 RESOLUTION 1.8A. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) TITLE 3 TARGET OR150 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DEHALOGENASE HALOTAG2; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)+MAGIC; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET15_NESG KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, NESG, HALTS, HALOGENASE, KEYWDS 3 DE NOVO PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.KUZIN,S.LEW,J.SEETHARAMAN,M.MAGLAQUI,R.XIAO,E.KOHAN,H.WANG, AUTHOR 2 J.K.EVERETT,T.B.ACTON,G.KORNHABER,G.T.MONTELIONE,J.F.HUNT,L.TONG, AUTHOR 3 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 4 06-DEC-23 4KYV 1 REMARK REVDAT 3 20-SEP-23 4KYV 1 REMARK LINK REVDAT 2 24-JAN-18 4KYV 1 AUTHOR JRNL REVDAT 1 24-JUL-13 4KYV 0 JRNL AUTH A.KUZIN,S.LEW,J.SEETHARAMAN,M.MAGLAQUI,R.XIAO,E.KOHAN, JRNL AUTH 2 H.WANG,J.K.EVERETT,T.B.ACTON,G.KORNHABER,G.T.MONTELIONE, JRNL AUTH 3 J.F.HUNT,L.TONG JRNL TITL NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET OR150 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1269 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.460 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 3 NUMBER OF REFLECTIONS : 101600 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.154 REMARK 3 R VALUE (WORKING SET) : 0.153 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.790 REMARK 3 FREE R VALUE TEST SET COUNT : 3853 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.6140 - 5.4440 0.94 3477 136 0.1580 0.1740 REMARK 3 2 5.4440 - 4.3250 0.96 3534 147 0.1250 0.1610 REMARK 3 3 4.3250 - 3.7800 0.97 3629 139 0.1270 0.1400 REMARK 3 4 3.7800 - 3.4350 0.98 3649 136 0.1420 0.1380 REMARK 3 5 3.4350 - 3.1890 0.97 3584 131 0.1450 0.1850 REMARK 3 6 3.1890 - 3.0010 0.97 3602 151 0.1510 0.1780 REMARK 3 7 3.0010 - 2.8510 0.98 3584 143 0.1540 0.2110 REMARK 3 8 2.8510 - 2.7270 0.97 3597 139 0.1480 0.1730 REMARK 3 9 2.7270 - 2.6220 0.97 3619 140 0.1490 0.2000 REMARK 3 10 2.6220 - 2.5320 0.97 3574 144 0.1490 0.1940 REMARK 3 11 2.5320 - 2.4520 0.96 3621 137 0.1490 0.1930 REMARK 3 12 2.4520 - 2.3820 0.96 3469 143 0.1450 0.1640 REMARK 3 13 2.3820 - 2.3200 0.95 3585 148 0.1460 0.1760 REMARK 3 14 2.3200 - 2.2630 0.95 3483 131 0.1450 0.1930 REMARK 3 15 2.2630 - 2.2120 0.94 3512 132 0.1540 0.1800 REMARK 3 16 2.2120 - 2.1650 0.94 3445 148 0.1540 0.1920 REMARK 3 17 2.1650 - 2.1210 0.93 3488 144 0.1590 0.2120 REMARK 3 18 2.1210 - 2.0810 0.93 3466 119 0.1620 0.2210 REMARK 3 19 2.0810 - 2.0440 0.93 3363 147 0.1640 0.2240 REMARK 3 20 2.0440 - 2.0100 0.92 3509 116 0.1720 0.2060 REMARK 3 21 2.0100 - 1.9770 0.93 3390 154 0.1690 0.2240 REMARK 3 22 1.9770 - 1.9470 0.92 3407 120 0.1790 0.2410 REMARK 3 23 1.9470 - 1.9180 0.91 3449 132 0.1800 0.2260 REMARK 3 24 1.9180 - 1.8910 0.92 3333 138 0.1880 0.2370 REMARK 3 25 1.8910 - 1.8650 0.92 3375 141 0.1900 0.2570 REMARK 3 26 1.8650 - 1.8410 0.91 3428 121 0.1970 0.2460 REMARK 3 27 1.8410 - 1.8180 0.91 3325 127 0.2050 0.2470 REMARK 3 28 1.8180 - 1.7960 0.88 3250 149 0.2120 0.2610 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.030 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.43 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 5010 REMARK 3 ANGLE : 1.122 6853 REMARK 3 CHIRALITY : 0.077 715 REMARK 3 PLANARITY : 0.007 901 REMARK 3 DIHEDRAL : 12.773 1825 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 10.4718 10.2827 20.2585 REMARK 3 T TENSOR REMARK 3 T11: 0.0832 T22: 0.0984 REMARK 3 T33: 0.1173 T12: -0.0007 REMARK 3 T13: -0.0134 T23: 0.0082 REMARK 3 L TENSOR REMARK 3 L11: 0.1144 L22: 0.3206 REMARK 3 L33: 0.5163 L12: -0.1004 REMARK 3 L13: -0.1862 L23: 0.2758 REMARK 3 S TENSOR REMARK 3 S11: -0.0066 S12: 0.0090 S13: 0.0057 REMARK 3 S21: -0.0075 S22: -0.0203 S23: 0.0221 REMARK 3 S31: -0.0009 S32: -0.0161 S33: 0.0304 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4KYV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000079967. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-NOV-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56625 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.760 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: PDB ENTRY 4KAC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION: 100MM NACL, 5MM DTT, REMARK 280 0.02% NAN3, 10MM TRIS-HCL (PH 7.5) . RESERVOIR SOLUTION:.1M REMARK 280 NH4NO3 .1M SODIUM ACETATE 24% PEG 20000 , MICROBATCH UNDER OIL, REMARK 280 PH 5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 47.38500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 GLY A 2 REMARK 465 HIS A 3 REMARK 465 SER A 9 REMARK 465 HIS A 10 REMARK 465 MSE A 11 REMARK 465 GLY A 12 REMARK 465 SER A 13 REMARK 465 MSE B 1 REMARK 465 GLY B 2 REMARK 465 HIS B 3 REMARK 465 HIS B 10 REMARK 465 MSE B 11 REMARK 465 GLY B 12 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER B 13 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASP B 42 NH2 ARG B 157 2546 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 53 49.81 -99.94 REMARK 500 THR A 54 -160.06 -108.12 REMARK 500 SER A 55 -168.77 -161.54 REMARK 500 GLU A 109 -94.00 -104.96 REMARK 500 ASP A 117 -127.08 54.00 REMARK 500 ARG A 164 47.89 -88.91 REMARK 500 ASP A 167 -72.67 -97.76 REMARK 500 VAL A 256 -67.87 -136.26 REMARK 500 LEU A 282 -93.94 -118.51 REMARK 500 PRO B 53 50.18 -100.51 REMARK 500 THR B 54 -158.32 -109.36 REMARK 500 SER B 55 -169.40 -162.66 REMARK 500 GLU B 109 -91.05 -110.66 REMARK 500 ASP B 117 -129.48 54.37 REMARK 500 ARG B 164 41.65 -89.79 REMARK 500 ASP B 167 -72.65 -97.39 REMARK 500 VAL B 256 -68.33 -138.40 REMARK 500 LEU B 282 -96.67 -120.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 403 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 52 OD1 REMARK 620 2 LEU A 213 O 119.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 402 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 61 O REMARK 620 2 ASP A 291 OD1 151.2 REMARK 620 3 HOH A 599 O 58.9 143.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 403 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 52 OD1 REMARK 620 2 LEU B 213 O 148.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 402 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 61 O REMARK 620 2 ASP B 291 OD1 156.5 REMARK 620 3 HOH B 623 O 57.9 138.4 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1Q9 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1Q9 B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4KAC RELATED DB: PDB REMARK 900 100% IDENTITY REMARK 900 RELATED ID: NESG-OR150 RELATED DB: TARGETTRACK DBREF 4KYV A 1 306 PDB 4KYV 4KYV 1 306 DBREF 4KYV B 1 306 PDB 4KYV 4KYV 1 306 SEQRES 1 A 306 MSE GLY HIS HIS HIS HIS HIS HIS SER HIS MSE GLY SER SEQRES 2 A 306 GLU ILE GLY THR GLY PHE PRO PHE ASP PRO HIS TYR VAL SEQRES 3 A 306 GLU VAL LEU GLY GLU ARG MSE HIS TYR VAL ASP VAL GLY SEQRES 4 A 306 PRO ARG ASP GLY THR PRO VAL LEU PHE LEU HIS GLY ASN SEQRES 5 A 306 PRO THR SER SER TYR LEU TRP ARG ASN ILE ILE PRO HIS SEQRES 6 A 306 VAL ALA PRO SER HIS ARG CYS ILE ALA PRO ASP LEU ILE SEQRES 7 A 306 GLY MSE GLY LYS SER ASP LYS PRO ASP LEU ASP TYR PHE SEQRES 8 A 306 PHE ASP ASP HIS VAL ARG TYR LEU ASP ALA PHE ILE GLU SEQRES 9 A 306 ALA LEU GLY LEU GLU GLU VAL VAL LEU VAL ILE HIS ASP SEQRES 10 A 306 TRP GLY SER ALA LEU GLY PHE HIS TRP ALA LYS ARG ASN SEQRES 11 A 306 PRO GLU ARG VAL LYS GLY ILE ALA CYS MSE GLU PHE ILE SEQRES 12 A 306 ARG PRO ILE PRO THR TRP ASP GLU TRP PRO GLU PHE ALA SEQRES 13 A 306 ARG GLU THR PHE GLN ALA PHE ARG THR ALA ASP VAL GLY SEQRES 14 A 306 ARG GLU LEU ILE ILE ASP GLN ASN ALA PHE ILE GLU GLY SEQRES 15 A 306 ALA LEU PRO MSE GLY VAL VAL ARG PRO LEU THR GLU VAL SEQRES 16 A 306 GLU MSE ASP HIS TYR ARG GLU PRO PHE LEU LYS PRO VAL SEQRES 17 A 306 ASP ARG GLU PRO LEU TRP ARG LEU PRO ASN GLU LEU PRO SEQRES 18 A 306 ILE ALA GLY GLU PRO ALA ASN ILE VAL ALA LEU VAL GLU SEQRES 19 A 306 ALA TYR MSE ASN TRP LEU HIS GLN SER PRO VAL PRO LYS SEQRES 20 A 306 LEU LEU PHE TRP GLY THR PRO GLY VAL LEU ILE PRO PRO SEQRES 21 A 306 ALA GLU ALA ALA ARG LEU ALA GLU SER LEU PRO ASN CYS SEQRES 22 A 306 LYS THR VAL ASP ILE GLY PRO GLY LEU PHE LEU LEU GLN SEQRES 23 A 306 GLU ASP ASN PRO ASP LEU ILE GLY SER GLU ILE ALA ARG SEQRES 24 A 306 TRP LEU PRO GLY LEU ALA GLY SEQRES 1 B 306 MSE GLY HIS HIS HIS HIS HIS HIS SER HIS MSE GLY SER SEQRES 2 B 306 GLU ILE GLY THR GLY PHE PRO PHE ASP PRO HIS TYR VAL SEQRES 3 B 306 GLU VAL LEU GLY GLU ARG MSE HIS TYR VAL ASP VAL GLY SEQRES 4 B 306 PRO ARG ASP GLY THR PRO VAL LEU PHE LEU HIS GLY ASN SEQRES 5 B 306 PRO THR SER SER TYR LEU TRP ARG ASN ILE ILE PRO HIS SEQRES 6 B 306 VAL ALA PRO SER HIS ARG CYS ILE ALA PRO ASP LEU ILE SEQRES 7 B 306 GLY MSE GLY LYS SER ASP LYS PRO ASP LEU ASP TYR PHE SEQRES 8 B 306 PHE ASP ASP HIS VAL ARG TYR LEU ASP ALA PHE ILE GLU SEQRES 9 B 306 ALA LEU GLY LEU GLU GLU VAL VAL LEU VAL ILE HIS ASP SEQRES 10 B 306 TRP GLY SER ALA LEU GLY PHE HIS TRP ALA LYS ARG ASN SEQRES 11 B 306 PRO GLU ARG VAL LYS GLY ILE ALA CYS MSE GLU PHE ILE SEQRES 12 B 306 ARG PRO ILE PRO THR TRP ASP GLU TRP PRO GLU PHE ALA SEQRES 13 B 306 ARG GLU THR PHE GLN ALA PHE ARG THR ALA ASP VAL GLY SEQRES 14 B 306 ARG GLU LEU ILE ILE ASP GLN ASN ALA PHE ILE GLU GLY SEQRES 15 B 306 ALA LEU PRO MSE GLY VAL VAL ARG PRO LEU THR GLU VAL SEQRES 16 B 306 GLU MSE ASP HIS TYR ARG GLU PRO PHE LEU LYS PRO VAL SEQRES 17 B 306 ASP ARG GLU PRO LEU TRP ARG LEU PRO ASN GLU LEU PRO SEQRES 18 B 306 ILE ALA GLY GLU PRO ALA ASN ILE VAL ALA LEU VAL GLU SEQRES 19 B 306 ALA TYR MSE ASN TRP LEU HIS GLN SER PRO VAL PRO LYS SEQRES 20 B 306 LEU LEU PHE TRP GLY THR PRO GLY VAL LEU ILE PRO PRO SEQRES 21 B 306 ALA GLU ALA ALA ARG LEU ALA GLU SER LEU PRO ASN CYS SEQRES 22 B 306 LYS THR VAL ASP ILE GLY PRO GLY LEU PHE LEU LEU GLN SEQRES 23 B 306 GLU ASP ASN PRO ASP LEU ILE GLY SER GLU ILE ALA ARG SEQRES 24 B 306 TRP LEU PRO GLY LEU ALA GLY MODRES 4KYV MSE A 33 MET SELENOMETHIONINE MODRES 4KYV MSE A 80 MET SELENOMETHIONINE MODRES 4KYV MSE A 140 MET SELENOMETHIONINE MODRES 4KYV MSE A 186 MET SELENOMETHIONINE MODRES 4KYV MSE A 197 MET SELENOMETHIONINE MODRES 4KYV MSE A 237 MET SELENOMETHIONINE MODRES 4KYV MSE B 33 MET SELENOMETHIONINE MODRES 4KYV MSE B 80 MET SELENOMETHIONINE MODRES 4KYV MSE B 140 MET SELENOMETHIONINE MODRES 4KYV MSE B 186 MET SELENOMETHIONINE MODRES 4KYV MSE B 197 MET SELENOMETHIONINE MODRES 4KYV MSE B 237 MET SELENOMETHIONINE HET MSE A 33 8 HET MSE A 80 8 HET MSE A 140 8 HET MSE A 186 8 HET MSE A 197 13 HET MSE A 237 8 HET MSE B 33 8 HET MSE B 80 8 HET MSE B 140 8 HET MSE B 186 8 HET MSE B 197 8 HET MSE B 237 8 HET 1Q9 A 401 18 HET NA A 402 1 HET NA A 403 1 HET 1Q9 B 401 18 HET NA B 402 1 HET NA B 403 1 HETNAM MSE SELENOMETHIONINE HETNAM 1Q9 N-(2-ETHOXY-3,5-DIMETHYLBENZYL)-1H-TETRAZOL-5-AMINE HETNAM NA SODIUM ION FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 3 1Q9 2(C12 H17 N5 O) FORMUL 4 NA 4(NA 1+) FORMUL 9 HOH *680(H2 O) HELIX 1 1 SER A 55 ARG A 60 5 6 HELIX 2 2 ILE A 62 ALA A 67 1 6 HELIX 3 3 PHE A 91 LEU A 106 1 16 HELIX 4 4 ASP A 117 ASN A 130 1 14 HELIX 5 5 THR A 148 TRP A 152 5 5 HELIX 6 6 PRO A 153 PHE A 155 5 3 HELIX 7 7 ALA A 156 ARG A 164 1 9 HELIX 8 8 ASP A 167 ILE A 174 1 8 HELIX 9 9 ASN A 177 GLY A 182 1 6 HELIX 10 10 GLY A 182 GLY A 187 1 6 HELIX 11 11 THR A 193 GLU A 202 1 10 HELIX 12 12 PRO A 203 LEU A 205 5 3 HELIX 13 13 LYS A 206 ASP A 209 5 4 HELIX 14 14 ARG A 210 LEU A 220 1 11 HELIX 15 15 PRO A 226 SER A 243 1 18 HELIX 16 16 PRO A 259 LEU A 270 1 12 HELIX 17 17 LEU A 284 ASN A 289 1 6 HELIX 18 18 ASN A 289 LEU A 301 1 13 HELIX 19 19 PRO A 302 ALA A 305 5 4 HELIX 20 20 SER B 55 ARG B 60 5 6 HELIX 21 21 ILE B 62 ALA B 67 1 6 HELIX 22 22 PHE B 91 GLY B 107 1 17 HELIX 23 23 ASP B 117 ASN B 130 1 14 HELIX 24 24 THR B 148 TRP B 152 5 5 HELIX 25 25 PRO B 153 ARG B 164 1 12 HELIX 26 26 ASP B 167 ILE B 174 1 8 HELIX 27 27 ASN B 177 GLY B 182 1 6 HELIX 28 28 GLY B 182 GLY B 187 1 6 HELIX 29 29 THR B 193 GLU B 202 1 10 HELIX 30 30 PRO B 203 LEU B 205 5 3 HELIX 31 31 LYS B 206 ASP B 209 5 4 HELIX 32 32 ARG B 210 LEU B 216 1 7 HELIX 33 33 PRO B 217 LEU B 220 5 4 HELIX 34 34 PRO B 226 SER B 243 1 18 HELIX 35 35 PRO B 259 LEU B 270 1 12 HELIX 36 36 LEU B 284 ASP B 288 5 5 HELIX 37 37 ASN B 289 LEU B 301 1 13 HELIX 38 38 PRO B 302 ALA B 305 5 4 SHEET 1 A 8 HIS A 24 VAL A 28 0 SHEET 2 A 8 GLU A 31 VAL A 38 -1 O GLU A 31 N VAL A 28 SHEET 3 A 8 CYS A 72 PRO A 75 -1 O CYS A 72 N VAL A 38 SHEET 4 A 8 VAL A 46 LEU A 49 1 N PHE A 48 O ILE A 73 SHEET 5 A 8 VAL A 111 HIS A 116 1 O VAL A 112 N LEU A 47 SHEET 6 A 8 VAL A 134 MSE A 140 1 O ALA A 138 N LEU A 113 SHEET 7 A 8 LYS A 247 PRO A 254 1 O LEU A 248 N CYS A 139 SHEET 8 A 8 CYS A 273 GLY A 281 1 O LYS A 274 N LEU A 249 SHEET 1 B 8 HIS B 24 VAL B 28 0 SHEET 2 B 8 GLU B 31 VAL B 38 -1 O GLU B 31 N VAL B 28 SHEET 3 B 8 CYS B 72 PRO B 75 -1 O CYS B 72 N VAL B 38 SHEET 4 B 8 VAL B 46 LEU B 49 1 N PHE B 48 O ILE B 73 SHEET 5 B 8 VAL B 111 HIS B 116 1 O VAL B 112 N LEU B 47 SHEET 6 B 8 VAL B 134 MSE B 140 1 O ALA B 138 N LEU B 113 SHEET 7 B 8 LYS B 247 PRO B 254 1 O LEU B 248 N CYS B 139 SHEET 8 B 8 CYS B 273 GLY B 281 1 O LYS B 274 N LEU B 249 LINK C ARG A 32 N MSE A 33 1555 1555 1.33 LINK C MSE A 33 N HIS A 34 1555 1555 1.32 LINK C GLY A 79 N MSE A 80 1555 1555 1.33 LINK C MSE A 80 N GLY A 81 1555 1555 1.33 LINK C CYS A 139 N MSE A 140 1555 1555 1.33 LINK C MSE A 140 N GLU A 141 1555 1555 1.33 LINK C PRO A 185 N MSE A 186 1555 1555 1.33 LINK C MSE A 186 N GLY A 187 1555 1555 1.33 LINK C GLU A 196 N MSE A 197 1555 1555 1.33 LINK C MSE A 197 N ASP A 198 1555 1555 1.33 LINK C TYR A 236 N MSE A 237 1555 1555 1.33 LINK C MSE A 237 N ASN A 238 1555 1555 1.34 LINK C ARG B 32 N MSE B 33 1555 1555 1.33 LINK C MSE B 33 N HIS B 34 1555 1555 1.32 LINK C GLY B 79 N MSE B 80 1555 1555 1.33 LINK C MSE B 80 N GLY B 81 1555 1555 1.33 LINK C CYS B 139 N MSE B 140 1555 1555 1.33 LINK C MSE B 140 N GLU B 141 1555 1555 1.33 LINK C PRO B 185 N MSE B 186 1555 1555 1.33 LINK C MSE B 186 N GLY B 187 1555 1555 1.33 LINK C GLU B 196 N MSE B 197 1555 1555 1.33 LINK C MSE B 197 N ASP B 198 1555 1555 1.33 LINK C TYR B 236 N MSE B 237 1555 1555 1.33 LINK C MSE B 237 N ASN B 238 1555 1555 1.33 LINK OD1 ASN A 52 NA NA A 403 1555 1555 2.76 LINK O ASN A 61 NA NA A 402 1555 1555 3.16 LINK O LEU A 213 NA NA A 403 1555 1555 2.67 LINK OD1 ASP A 291 NA NA A 402 1555 1555 2.22 LINK NA NA A 402 O HOH A 599 1555 1555 2.88 LINK OD1 ASN B 52 NA NA B 403 1555 1555 2.19 LINK O ASN B 61 NA NA B 402 1555 1555 3.00 LINK O LEU B 213 NA NA B 403 1555 1555 2.59 LINK OD1 ASP B 291 NA NA B 402 1555 1555 2.27 LINK NA NA B 402 O HOH B 623 1555 1555 2.99 CISPEP 1 ASN A 52 PRO A 53 0 -11.41 CISPEP 2 GLU A 225 PRO A 226 0 -3.59 CISPEP 3 THR A 253 PRO A 254 0 6.88 CISPEP 4 ASN B 52 PRO B 53 0 -8.76 CISPEP 5 GLU B 225 PRO B 226 0 -3.18 CISPEP 6 THR B 253 PRO B 254 0 2.64 SITE 1 AC1 12 PRO A 53 ASP A 117 TRP A 118 TRP A 152 SITE 2 AC1 12 ALA A 156 PHE A 160 PHE A 179 ALA A 183 SITE 3 AC1 12 PRO A 217 LEU A 220 VAL A 256 PHE A 283 SITE 1 AC2 4 ASN A 61 HIS A 65 ASP A 291 HOH A 599 SITE 1 AC3 4 ASN A 52 PHE A 179 LEU A 213 PRO A 217 SITE 1 AC4 13 ASN B 52 PRO B 53 ASP B 117 TRP B 118 SITE 2 AC4 13 TRP B 152 PHE B 160 PHE B 179 ALA B 183 SITE 3 AC4 13 MSE B 186 PRO B 217 LEU B 220 VAL B 256 SITE 4 AC4 13 PHE B 283 SITE 1 AC5 4 ASN B 61 HIS B 65 ASP B 291 HOH B 623 SITE 1 AC6 4 ASN B 52 PHE B 179 LEU B 213 PRO B 217 CRYST1 42.938 94.770 73.483 90.00 93.11 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023289 0.000000 0.001267 0.00000 SCALE2 0.000000 0.010552 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013629 0.00000