HEADER HYDROLASE/HYDROLASE INHIBITOR 29-MAY-13 4KZA TITLE CRYSTAL STRUCTURE OF AMPC BETA-LACTAMASE IN COMPLEX WITH FRAGMENT 48 TITLE 2 (3-(CYCLOPROPYLSULFAMOYL)THIOPHENE-2-CARBOXYLIC ACID) COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 20-377; COMPND 5 SYNONYM: AMPC BETA-LACTAMASE, CEPHALOSPORINASE; COMPND 6 EC: 3.5.2.6; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: AMPA, AMPC, B4150, JW4111; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: JM109; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: POGO295 KEYWDS AMPC BETA-LACTAMASE, CLASS C, HYDROLASE, CEPHALOSPORINASE, HYDROLASE- KEYWDS 2 HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR O.EIDAM,S.BARELIER,I.FISH,B.K.SHOICHET REVDAT 3 20-SEP-23 4KZA 1 REMARK REVDAT 2 30-JUL-14 4KZA 1 JRNL REVDAT 1 21-MAY-14 4KZA 0 JRNL AUTH S.BARELIER,O.EIDAM,I.FISH,J.HOLLANDER,F.FIGAROA,R.NACHANE, JRNL AUTH 2 J.J.IRWIN,B.K.SHOICHET,G.SIEGAL JRNL TITL INCREASING CHEMICAL SPACE COVERAGE BY COMBINING EMPIRICAL JRNL TITL 2 AND COMPUTATIONAL FRAGMENT SCREENS. JRNL REF ACS CHEM.BIOL. V. 9 1528 2014 JRNL REFN ISSN 1554-8929 JRNL PMID 24807704 JRNL DOI 10.1021/CB5001636 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8_1069 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.56 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 102263 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.680 REMARK 3 FREE R VALUE TEST SET COUNT : 3763 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.5602 - 4.7933 0.99 3746 139 0.1717 0.1972 REMARK 3 2 4.7933 - 3.8071 1.00 3702 167 0.1335 0.1545 REMARK 3 3 3.8071 - 3.3266 0.99 3678 135 0.1368 0.1681 REMARK 3 4 3.3266 - 3.0228 0.99 3656 145 0.1454 0.1682 REMARK 3 5 3.0228 - 2.8063 1.00 3647 166 0.1569 0.1495 REMARK 3 6 2.8063 - 2.6410 0.99 3642 151 0.1557 0.2014 REMARK 3 7 2.6410 - 2.5088 1.00 3698 149 0.1540 0.2032 REMARK 3 8 2.5088 - 2.3996 1.00 3662 133 0.1576 0.2153 REMARK 3 9 2.3996 - 2.3073 1.00 3660 143 0.1518 0.1936 REMARK 3 10 2.3073 - 2.2277 0.93 3423 120 0.1821 0.2072 REMARK 3 11 2.2277 - 2.1581 0.98 3628 134 0.1588 0.1901 REMARK 3 12 2.1581 - 2.0964 1.00 3668 165 0.1487 0.1827 REMARK 3 13 2.0964 - 2.0412 1.00 3631 141 0.1518 0.1689 REMARK 3 14 2.0412 - 1.9914 1.00 3695 137 0.1506 0.1972 REMARK 3 15 1.9914 - 1.9462 1.00 3648 143 0.1597 0.1871 REMARK 3 16 1.9462 - 1.9048 0.95 3475 132 0.2237 0.2684 REMARK 3 17 1.9048 - 1.8667 0.98 3670 86 0.1945 0.2384 REMARK 3 18 1.8667 - 1.8314 1.00 3674 126 0.1700 0.2161 REMARK 3 19 1.8314 - 1.7987 1.00 3656 150 0.1711 0.1932 REMARK 3 20 1.7987 - 1.7683 1.00 3625 147 0.1652 0.2139 REMARK 3 21 1.7683 - 1.7397 1.00 3668 142 0.1794 0.2090 REMARK 3 22 1.7397 - 1.7130 1.00 3739 92 0.1769 0.1872 REMARK 3 23 1.7130 - 1.6878 1.00 3646 114 0.1822 0.2258 REMARK 3 24 1.6878 - 1.6640 1.00 3652 152 0.1853 0.2228 REMARK 3 25 1.6640 - 1.6415 1.00 3613 150 0.1985 0.2324 REMARK 3 26 1.6415 - 1.6202 1.00 3679 154 0.2145 0.2278 REMARK 3 27 1.6202 - 1.6000 1.00 3619 150 0.2310 0.2827 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.910 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.34 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 5902 REMARK 3 ANGLE : 1.501 8114 REMARK 3 CHIRALITY : 0.104 865 REMARK 3 PLANARITY : 0.008 1046 REMARK 3 DIHEDRAL : 22.405 2194 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 4:66) REMARK 3 ORIGIN FOR THE GROUP (A): 17.4873 -10.6738 26.4075 REMARK 3 T TENSOR REMARK 3 T11: 0.0972 T22: 0.1663 REMARK 3 T33: 0.1163 T12: -0.0691 REMARK 3 T13: 0.0281 T23: -0.0334 REMARK 3 L TENSOR REMARK 3 L11: 1.3735 L22: 1.9906 REMARK 3 L33: 2.5138 L12: 0.6093 REMARK 3 L13: -0.3367 L23: -0.5751 REMARK 3 S TENSOR REMARK 3 S11: 0.1001 S12: -0.2714 S13: 0.0701 REMARK 3 S21: 0.1992 S22: -0.0756 S23: 0.1833 REMARK 3 S31: 0.1024 S32: -0.1782 S33: -0.0212 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 67:182) REMARK 3 ORIGIN FOR THE GROUP (A): 39.2360 6.8199 8.1983 REMARK 3 T TENSOR REMARK 3 T11: 0.0648 T22: 0.1057 REMARK 3 T33: 0.0678 T12: -0.0181 REMARK 3 T13: 0.0053 T23: 0.0082 REMARK 3 L TENSOR REMARK 3 L11: 1.2771 L22: 3.4383 REMARK 3 L33: 1.0815 L12: -0.4011 REMARK 3 L13: -0.3021 L23: -0.4146 REMARK 3 S TENSOR REMARK 3 S11: 0.0564 S12: 0.1761 S13: 0.1100 REMARK 3 S21: -0.2532 S22: -0.0779 S23: -0.1126 REMARK 3 S31: -0.0538 S32: 0.0173 S33: 0.0147 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 183:361) REMARK 3 ORIGIN FOR THE GROUP (A): 30.2461 -1.8215 22.7778 REMARK 3 T TENSOR REMARK 3 T11: 0.0839 T22: 0.1132 REMARK 3 T33: 0.0706 T12: -0.0290 REMARK 3 T13: 0.0177 T23: -0.0098 REMARK 3 L TENSOR REMARK 3 L11: 1.9810 L22: 1.3282 REMARK 3 L33: 1.1894 L12: 0.8985 REMARK 3 L13: 0.3649 L23: -0.0703 REMARK 3 S TENSOR REMARK 3 S11: 0.0754 S12: -0.2281 S13: 0.0798 REMARK 3 S21: 0.1624 S22: -0.1227 S23: 0.0498 REMARK 3 S31: -0.0148 S32: -0.0598 S33: 0.0451 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN B AND RESID 4:24) REMARK 3 ORIGIN FOR THE GROUP (A): 86.5928 -12.6481 13.4795 REMARK 3 T TENSOR REMARK 3 T11: 0.1214 T22: 0.4444 REMARK 3 T33: 0.1831 T12: 0.0958 REMARK 3 T13: 0.0578 T23: -0.0258 REMARK 3 L TENSOR REMARK 3 L11: 9.2076 L22: 7.6446 REMARK 3 L33: 5.5356 L12: 5.1804 REMARK 3 L13: 1.2842 L23: 2.3769 REMARK 3 S TENSOR REMARK 3 S11: 0.1125 S12: 0.6555 S13: -0.4110 REMARK 3 S21: -0.5183 S22: 0.2211 S23: -0.5833 REMARK 3 S31: 0.1315 S32: 0.3798 S33: -0.2992 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN B AND RESID 25:172) REMARK 3 ORIGIN FOR THE GROUP (A): 69.0531 4.4272 33.0108 REMARK 3 T TENSOR REMARK 3 T11: 0.0872 T22: 0.2107 REMARK 3 T33: 0.0768 T12: -0.0486 REMARK 3 T13: -0.0161 T23: 0.0091 REMARK 3 L TENSOR REMARK 3 L11: 0.5798 L22: 1.3243 REMARK 3 L33: 0.6504 L12: -0.3530 REMARK 3 L13: -0.2359 L23: 0.2407 REMARK 3 S TENSOR REMARK 3 S11: -0.0441 S12: -0.1527 S13: 0.0195 REMARK 3 S21: 0.1447 S22: 0.0982 S23: -0.0316 REMARK 3 S31: 0.0179 S32: 0.1348 S33: -0.0513 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN B AND RESID 173:361) REMARK 3 ORIGIN FOR THE GROUP (A): 71.5445 -3.3884 24.1540 REMARK 3 T TENSOR REMARK 3 T11: 0.0777 T22: 0.1838 REMARK 3 T33: 0.0939 T12: -0.0515 REMARK 3 T13: -0.0071 T23: -0.0006 REMARK 3 L TENSOR REMARK 3 L11: 1.1032 L22: 1.3330 REMARK 3 L33: 1.0962 L12: -0.7985 REMARK 3 L13: 0.0420 L23: -0.2326 REMARK 3 S TENSOR REMARK 3 S11: -0.0045 S12: -0.0033 S13: 0.0065 REMARK 3 S21: -0.0544 S22: 0.0298 S23: -0.0670 REMARK 3 S31: 0.0693 S32: 0.1697 S33: -0.0172 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4KZA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JUN-13. REMARK 100 THE DEPOSITION ID IS D_1000079982. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-MAY-12 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 8.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.115869 REMARK 200 MONOCHROMATOR : KHOZU DOUBLE FLAT CRYSTAL REMARK 200 SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 102278 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 29.555 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.4600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.48100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.460 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 1KE4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.7 M POTASSIUM PHOSPHATE, PH 8.8, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 59.31000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.31500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 59.31000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 38.31500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 99 CG CD CE NZ REMARK 470 ASP A 123 CG OD1 OD2 REMARK 470 GLU A 124 CG CD OE1 OE2 REMARK 470 LYS A 126 CG CD CE NZ REMARK 470 SER A 128 OG REMARK 470 ARG A 204 NE CZ NH1 NH2 REMARK 470 GLU A 205 CG CD OE1 OE2 REMARK 470 LYS A 207 CG CD CE NZ REMARK 470 LYS A 246 CG CD CE NZ REMARK 470 SER A 282 OG REMARK 470 LYS A 290 CE NZ REMARK 470 GLN B 7 CG CD OE1 NE2 REMARK 470 GLU B 21 CG CD OE1 OE2 REMARK 470 LYS B 37 CG CD CE NZ REMARK 470 LYS B 50 CG CD CE NZ REMARK 470 GLN B 56 CG CD OE1 NE2 REMARK 470 LYS B 126 CG CD CE NZ REMARK 470 LYS B 207 CG CD CE NZ REMARK 470 LYS B 246 CG CD CE NZ REMARK 470 LYS B 290 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 178 -58.05 -124.89 REMARK 500 TYR A 221 20.02 -155.78 REMARK 500 ASN A 341 45.48 -94.63 REMARK 500 LYS B 126 -54.50 -124.95 REMARK 500 VAL B 178 -57.89 -124.13 REMARK 500 TYR B 221 21.47 -159.25 REMARK 500 ALA B 307 122.14 -39.76 REMARK 500 ASN B 341 48.70 -94.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NZ9 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NZ9 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NZ9 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NZ9 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NZ9 A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NZ9 B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NZ9 B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NZ9 B 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4KZ3 RELATED DB: PDB REMARK 900 RELATED ID: 4KZ4 RELATED DB: PDB REMARK 900 RELATED ID: 4KZ5 RELATED DB: PDB REMARK 900 RELATED ID: 4KZ6 RELATED DB: PDB REMARK 900 RELATED ID: 4KZ7 RELATED DB: PDB REMARK 900 RELATED ID: 4KZ8 RELATED DB: PDB REMARK 900 RELATED ID: 4KZ9 RELATED DB: PDB REMARK 900 RELATED ID: 4KZB RELATED DB: PDB DBREF 4KZA A 4 361 UNP P00811 AMPC_ECOLI 20 377 DBREF 4KZA B 4 361 UNP P00811 AMPC_ECOLI 20 377 SEQRES 1 A 358 ALA PRO GLN GLN ILE ASN ASP ILE VAL HIS ARG THR ILE SEQRES 2 A 358 THR PRO LEU ILE GLU GLN GLN LYS ILE PRO GLY MET ALA SEQRES 3 A 358 VAL ALA VAL ILE TYR GLN GLY LYS PRO TYR TYR PHE THR SEQRES 4 A 358 TRP GLY TYR ALA ASP ILE ALA LYS LYS GLN PRO VAL THR SEQRES 5 A 358 GLN GLN THR LEU PHE GLU LEU GLY SER VAL SER LYS THR SEQRES 6 A 358 PHE THR GLY VAL LEU GLY GLY ASP ALA ILE ALA ARG GLY SEQRES 7 A 358 GLU ILE LYS LEU SER ASP PRO THR THR LYS TYR TRP PRO SEQRES 8 A 358 GLU LEU THR ALA LYS GLN TRP ASN GLY ILE THR LEU LEU SEQRES 9 A 358 HIS LEU ALA THR TYR THR ALA GLY GLY LEU PRO LEU GLN SEQRES 10 A 358 VAL PRO ASP GLU VAL LYS SER SER SER ASP LEU LEU ARG SEQRES 11 A 358 PHE TYR GLN ASN TRP GLN PRO ALA TRP ALA PRO GLY THR SEQRES 12 A 358 GLN ARG LEU TYR ALA ASN SER SER ILE GLY LEU PHE GLY SEQRES 13 A 358 ALA LEU ALA VAL LYS PRO SER GLY LEU SER PHE GLU GLN SEQRES 14 A 358 ALA MET GLN THR ARG VAL PHE GLN PRO LEU LYS LEU ASN SEQRES 15 A 358 HIS THR TRP ILE ASN VAL PRO PRO ALA GLU GLU LYS ASN SEQRES 16 A 358 TYR ALA TRP GLY TYR ARG GLU GLY LYS ALA VAL HIS VAL SEQRES 17 A 358 SER PRO GLY ALA LEU ASP ALA GLU ALA TYR GLY VAL LYS SEQRES 18 A 358 SER THR ILE GLU ASP MET ALA ARG TRP VAL GLN SER ASN SEQRES 19 A 358 LEU LYS PRO LEU ASP ILE ASN GLU LYS THR LEU GLN GLN SEQRES 20 A 358 GLY ILE GLN LEU ALA GLN SER ARG TYR TRP GLN THR GLY SEQRES 21 A 358 ASP MET TYR GLN GLY LEU GLY TRP GLU MET LEU ASP TRP SEQRES 22 A 358 PRO VAL ASN PRO ASP SER ILE ILE ASN GLY SER ASP ASN SEQRES 23 A 358 LYS ILE ALA LEU ALA ALA ARG PRO VAL LYS ALA ILE THR SEQRES 24 A 358 PRO PRO THR PRO ALA VAL ARG ALA SER TRP VAL HIS LYS SEQRES 25 A 358 THR GLY ALA THR GLY GLY PHE GLY SER TYR VAL ALA PHE SEQRES 26 A 358 ILE PRO GLU LYS GLU LEU GLY ILE VAL MET LEU ALA ASN SEQRES 27 A 358 LYS ASN TYR PRO ASN PRO ALA ARG VAL ASP ALA ALA TRP SEQRES 28 A 358 GLN ILE LEU ASN ALA LEU GLN SEQRES 1 B 358 ALA PRO GLN GLN ILE ASN ASP ILE VAL HIS ARG THR ILE SEQRES 2 B 358 THR PRO LEU ILE GLU GLN GLN LYS ILE PRO GLY MET ALA SEQRES 3 B 358 VAL ALA VAL ILE TYR GLN GLY LYS PRO TYR TYR PHE THR SEQRES 4 B 358 TRP GLY TYR ALA ASP ILE ALA LYS LYS GLN PRO VAL THR SEQRES 5 B 358 GLN GLN THR LEU PHE GLU LEU GLY SER VAL SER LYS THR SEQRES 6 B 358 PHE THR GLY VAL LEU GLY GLY ASP ALA ILE ALA ARG GLY SEQRES 7 B 358 GLU ILE LYS LEU SER ASP PRO THR THR LYS TYR TRP PRO SEQRES 8 B 358 GLU LEU THR ALA LYS GLN TRP ASN GLY ILE THR LEU LEU SEQRES 9 B 358 HIS LEU ALA THR TYR THR ALA GLY GLY LEU PRO LEU GLN SEQRES 10 B 358 VAL PRO ASP GLU VAL LYS SER SER SER ASP LEU LEU ARG SEQRES 11 B 358 PHE TYR GLN ASN TRP GLN PRO ALA TRP ALA PRO GLY THR SEQRES 12 B 358 GLN ARG LEU TYR ALA ASN SER SER ILE GLY LEU PHE GLY SEQRES 13 B 358 ALA LEU ALA VAL LYS PRO SER GLY LEU SER PHE GLU GLN SEQRES 14 B 358 ALA MET GLN THR ARG VAL PHE GLN PRO LEU LYS LEU ASN SEQRES 15 B 358 HIS THR TRP ILE ASN VAL PRO PRO ALA GLU GLU LYS ASN SEQRES 16 B 358 TYR ALA TRP GLY TYR ARG GLU GLY LYS ALA VAL HIS VAL SEQRES 17 B 358 SER PRO GLY ALA LEU ASP ALA GLU ALA TYR GLY VAL LYS SEQRES 18 B 358 SER THR ILE GLU ASP MET ALA ARG TRP VAL GLN SER ASN SEQRES 19 B 358 LEU LYS PRO LEU ASP ILE ASN GLU LYS THR LEU GLN GLN SEQRES 20 B 358 GLY ILE GLN LEU ALA GLN SER ARG TYR TRP GLN THR GLY SEQRES 21 B 358 ASP MET TYR GLN GLY LEU GLY TRP GLU MET LEU ASP TRP SEQRES 22 B 358 PRO VAL ASN PRO ASP SER ILE ILE ASN GLY SER ASP ASN SEQRES 23 B 358 LYS ILE ALA LEU ALA ALA ARG PRO VAL LYS ALA ILE THR SEQRES 24 B 358 PRO PRO THR PRO ALA VAL ARG ALA SER TRP VAL HIS LYS SEQRES 25 B 358 THR GLY ALA THR GLY GLY PHE GLY SER TYR VAL ALA PHE SEQRES 26 B 358 ILE PRO GLU LYS GLU LEU GLY ILE VAL MET LEU ALA ASN SEQRES 27 B 358 LYS ASN TYR PRO ASN PRO ALA ARG VAL ASP ALA ALA TRP SEQRES 28 B 358 GLN ILE LEU ASN ALA LEU GLN HET NZ9 A 401 15 HET NZ9 A 402 15 HET NZ9 A 403 15 HET NZ9 A 404 15 HET NZ9 A 405 15 HET PO4 A 406 5 HET NZ9 B 401 15 HET NZ9 B 402 15 HET NZ9 B 403 15 HETNAM NZ9 3-(CYCLOPROPYLSULFAMOYL)THIOPHENE-2-CARBOXYLIC ACID HETNAM PO4 PHOSPHATE ION FORMUL 3 NZ9 8(C8 H9 N O4 S2) FORMUL 8 PO4 O4 P 3- FORMUL 12 HOH *773(H2 O) HELIX 1 1 PRO A 5 LYS A 24 1 20 HELIX 2 2 VAL A 65 ARG A 80 1 16 HELIX 3 3 PRO A 88 TYR A 92 5 5 HELIX 4 4 ALA A 98 ASN A 102 5 5 HELIX 5 5 THR A 105 THR A 111 1 7 HELIX 6 6 SER A 127 TRP A 138 1 12 HELIX 7 7 ALA A 151 VAL A 163 1 13 HELIX 8 8 SER A 169 VAL A 178 1 10 HELIX 9 9 PRO A 192 TYR A 199 5 8 HELIX 10 10 LEU A 216 TYR A 221 1 6 HELIX 11 11 THR A 226 LYS A 239 1 14 HELIX 12 12 PRO A 240 ILE A 243 5 4 HELIX 13 13 GLU A 245 GLN A 256 1 12 HELIX 14 14 ASN A 279 SER A 287 1 9 HELIX 15 15 ASP A 288 LEU A 293 1 6 HELIX 16 16 PRO A 330 GLU A 333 5 4 HELIX 17 17 PRO A 345 GLN A 361 1 17 HELIX 18 18 PRO B 5 LYS B 24 1 20 HELIX 19 19 VAL B 65 ARG B 80 1 16 HELIX 20 20 PRO B 88 TYR B 92 5 5 HELIX 21 21 ALA B 98 ASN B 102 5 5 HELIX 22 22 THR B 105 THR B 111 1 7 HELIX 23 23 SER B 127 TRP B 138 1 12 HELIX 24 24 ALA B 151 VAL B 163 1 13 HELIX 25 25 SER B 169 VAL B 178 1 10 HELIX 26 26 PRO B 192 TYR B 199 5 8 HELIX 27 27 LEU B 216 GLY B 222 1 7 HELIX 28 28 THR B 226 LYS B 239 1 14 HELIX 29 29 PRO B 240 ILE B 243 5 4 HELIX 30 30 GLU B 245 GLN B 256 1 12 HELIX 31 31 ASN B 279 SER B 287 1 9 HELIX 32 32 ASP B 288 LEU B 293 1 6 HELIX 33 33 PRO B 330 GLU B 333 5 4 HELIX 34 34 PRO B 345 GLN B 361 1 17 SHEET 1 A10 GLN A 52 PRO A 53 0 SHEET 2 A10 LYS A 37 ASP A 47 -1 N ALA A 46 O GLN A 52 SHEET 3 A10 GLY A 27 TYR A 34 -1 N VAL A 30 O PHE A 41 SHEET 4 A10 LEU A 334 ALA A 340 -1 O LEU A 339 N ALA A 29 SHEET 5 A10 PHE A 322 ILE A 329 -1 N ILE A 329 O LEU A 334 SHEET 6 A10 SER A 311 THR A 319 -1 N GLY A 317 O SER A 324 SHEET 7 A10 GLU A 272 ASP A 275 -1 N GLU A 272 O HIS A 314 SHEET 8 A10 MET A 265 GLN A 267 -1 N TYR A 266 O MET A 273 SHEET 9 A10 ARG A 258 THR A 262 -1 N TYR A 259 O GLN A 267 SHEET 10 A10 LYS A 299 THR A 305 -1 O THR A 305 N ARG A 258 SHEET 1 B 2 PHE A 60 GLU A 61 0 SHEET 2 B 2 LYS A 224 SER A 225 -1 O SER A 225 N PHE A 60 SHEET 1 C 2 GLN A 147 ARG A 148 0 SHEET 2 C 2 ARG A 296 PRO A 297 -1 O ARG A 296 N ARG A 148 SHEET 1 D 2 GLY A 202 ARG A 204 0 SHEET 2 D 2 LYS A 207 VAL A 209 -1 O VAL A 209 N GLY A 202 SHEET 1 E10 GLN B 52 PRO B 53 0 SHEET 2 E10 LYS B 37 ASP B 47 -1 N ALA B 46 O GLN B 52 SHEET 3 E10 GLY B 27 TYR B 34 -1 N TYR B 34 O LYS B 37 SHEET 4 E10 LEU B 334 ALA B 340 -1 O GLY B 335 N ILE B 33 SHEET 5 E10 PHE B 322 ILE B 329 -1 N ILE B 329 O LEU B 334 SHEET 6 E10 SER B 311 THR B 319 -1 N GLY B 317 O SER B 324 SHEET 7 E10 GLU B 272 ASP B 275 -1 N LEU B 274 O TRP B 312 SHEET 8 E10 MET B 265 GLN B 267 -1 N TYR B 266 O MET B 273 SHEET 9 E10 ARG B 258 THR B 262 -1 N THR B 262 O MET B 265 SHEET 10 E10 LYS B 299 THR B 305 -1 O LYS B 299 N GLN B 261 SHEET 1 F 2 PHE B 60 GLU B 61 0 SHEET 2 F 2 LYS B 224 SER B 225 -1 O SER B 225 N PHE B 60 SHEET 1 G 2 GLN B 147 ARG B 148 0 SHEET 2 G 2 ARG B 296 PRO B 297 -1 O ARG B 296 N ARG B 148 SHEET 1 H 2 GLY B 202 ARG B 204 0 SHEET 2 H 2 LYS B 207 VAL B 209 -1 O VAL B 209 N GLY B 202 CISPEP 1 TRP A 276 PRO A 277 0 4.69 CISPEP 2 THR A 302 PRO A 303 0 -2.92 CISPEP 3 TRP B 276 PRO B 277 0 4.50 CISPEP 4 THR B 302 PRO B 303 0 0.13 SITE 1 AC1 8 LEU A 254 SER A 257 PRO A 306 HOH A 686 SITE 2 AC1 8 GLN B 250 GLN B 253 LEU B 254 SER B 257 SITE 1 AC2 7 LYS A 24 PRO A 26 ILE A 48 TYR A 203 SITE 2 AC2 7 LYS A 342 HOH A 689 HOH A 830 SITE 1 AC3 9 GLN A 261 THR A 262 GLY A 263 PRO A 297 SITE 2 AC3 9 VAL A 298 HOH A 733 HOH A 758 LYS B 50 SITE 3 AC3 9 LYS B 51 SITE 1 AC4 10 SER A 64 GLN A 120 ASN A 152 LEU A 293 SITE 2 AC4 10 GLY A 317 ALA A 318 THR A 319 NZ9 A 405 SITE 3 AC4 10 HOH A 675 HOH A 688 SITE 1 AC5 10 GLN A 120 VAL A 211 SER A 212 GLY A 320 SITE 2 AC5 10 NZ9 A 404 HOH A 552 HOH A 586 HOH A 698 SITE 3 AC5 10 HOH A 725 HOH A 880 SITE 1 AC6 7 HIS A 13 PHE A 41 THR A 42 HOH A 655 SITE 2 AC6 7 HOH A 731 GLY B 116 HOH B 558 SITE 1 AC7 12 SER B 64 LEU B 119 GLN B 120 ASN B 152 SITE 2 AC7 12 TYR B 221 LEU B 293 GLY B 317 ALA B 318 SITE 3 AC7 12 THR B 319 NZ9 B 403 HOH B 669 HOH B 670 SITE 1 AC8 11 GLN A 250 HOH A 874 PRO B 240 LEU B 241 SITE 2 AC8 11 GLN B 253 GLN B 256 PRO B 306 ALA B 307 SITE 3 AC8 11 ARG B 309 PRO B 330 HOH B 681 SITE 1 AC9 9 VAL B 211 SER B 212 THR B 319 GLY B 320 SITE 2 AC9 9 NZ9 B 401 HOH B 689 HOH B 699 HOH B 792 SITE 3 AC9 9 HOH B 812 CRYST1 118.620 76.630 97.980 90.00 116.91 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008430 0.000000 0.004279 0.00000 SCALE2 0.000000 0.013050 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011445 0.00000