HEADER UNKNOWN FUNCTION 04-JUN-13 4L2M TITLE CRYSTAL STRUCTURE OF THE 2/2 HEMOGLOBIN FROM SYNECHOCOCCUS SP. PCC TITLE 2 7002 IN THE CYANOMET STATE AND WITH COVALENTLY ATTACHED HEME COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYANOGLOBIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNECHOCOCCUS SP.; SOURCE 3 ORGANISM_TAXID: 32049; SOURCE 4 STRAIN: PCC 7002; SOURCE 5 GENE: GLBN, SYNPCC7002_A1621; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET3C KEYWDS GROUP I 2/2 HEMOGLOBIN, GLBN, TRHBN, CYANOMET HEMOGLOBIN, HISTIDINE- KEYWDS 2 HEME COVALENT LINKAGE, TRUNCATED HEMOGLOBIN, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR B.B.WENKE,J.L.SCHLESSMAN,A.HEROUX,J.T.J.LECOMTE REVDAT 5 20-SEP-23 4L2M 1 REMARK LINK REVDAT 4 19-FEB-14 4L2M 1 JRNL REVDAT 3 18-SEP-13 4L2M 1 JRNL REVDAT 2 19-JUN-13 4L2M 1 REMARK REVDAT 1 12-JUN-13 4L2M 0 JRNL AUTH B.B.WENKE,J.T.LECOMTE,A.HEROUX,J.L.SCHLESSMAN JRNL TITL THE 2/2 HEMOGLOBIN FROM THE CYANOBACTERIUM SYNECHOCOCCUS SP. JRNL TITL 2 PCC 7002 WITH COVALENTLY ATTACHED HEME: COMPARISON OF X-RAY JRNL TITL 3 AND NMR STRUCTURES. JRNL REF PROTEINS V. 82 528 2014 JRNL REFN ISSN 0887-3585 JRNL PMID 23999883 JRNL DOI 10.1002/PROT.24409 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.19 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 12279 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.288 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 609 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.25 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.31 REMARK 3 REFLECTION IN BIN (WORKING SET) : 846 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.89 REMARK 3 BIN R VALUE (WORKING SET) : 0.2460 REMARK 3 BIN FREE R VALUE SET COUNT : 47 REMARK 3 BIN FREE R VALUE : 0.2690 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1934 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 105 REMARK 3 SOLVENT ATOMS : 37 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.45000 REMARK 3 B22 (A**2) : -1.16000 REMARK 3 B33 (A**2) : 0.15000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.32000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.392 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.278 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.228 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.864 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.938 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.902 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2080 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1944 ; 0.007 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2832 ; 1.700 ; 2.007 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4422 ; 0.754 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 244 ; 6.634 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 106 ;39.568 ;24.717 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 336 ;15.368 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;15.202 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 303 ; 0.060 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2420 ; 0.012 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 512 ; 0.016 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 984 ; 2.336 ; 2.941 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 981 ; 2.337 ; 2.940 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1224 ; 3.459 ; 4.395 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 32 REMARK 3 ORIGIN FOR THE GROUP (A): -6.7125 -4.2980 29.0018 REMARK 3 T TENSOR REMARK 3 T11: 0.1642 T22: 0.1252 REMARK 3 T33: 0.2617 T12: -0.0207 REMARK 3 T13: -0.0130 T23: 0.0382 REMARK 3 L TENSOR REMARK 3 L11: 0.6233 L22: 4.9556 REMARK 3 L33: 1.4378 L12: 0.9706 REMARK 3 L13: -0.3067 L23: 1.5415 REMARK 3 S TENSOR REMARK 3 S11: 0.1236 S12: -0.0515 S13: -0.1296 REMARK 3 S21: -0.0308 S22: -0.1234 S23: -0.1942 REMARK 3 S31: -0.1041 S32: -0.0739 S33: -0.0002 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 33 A 58 REMARK 3 ORIGIN FOR THE GROUP (A): -4.1369 1.6942 22.5916 REMARK 3 T TENSOR REMARK 3 T11: 0.0801 T22: 0.1226 REMARK 3 T33: 0.1461 T12: -0.0010 REMARK 3 T13: 0.0192 T23: 0.0026 REMARK 3 L TENSOR REMARK 3 L11: 2.5014 L22: 5.4178 REMARK 3 L33: 1.7206 L12: 0.0580 REMARK 3 L13: -0.9783 L23: 2.0978 REMARK 3 S TENSOR REMARK 3 S11: -0.0734 S12: 0.2223 S13: -0.0359 REMARK 3 S21: -0.0862 S22: -0.0118 S23: 0.1495 REMARK 3 S31: -0.1045 S32: 0.0621 S33: 0.0852 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 59 A 124 REMARK 3 ORIGIN FOR THE GROUP (A): 4.0328 -0.5393 29.4167 REMARK 3 T TENSOR REMARK 3 T11: 0.0921 T22: 0.1820 REMARK 3 T33: 0.1609 T12: 0.0011 REMARK 3 T13: 0.0309 T23: 0.0315 REMARK 3 L TENSOR REMARK 3 L11: 2.0564 L22: 1.0154 REMARK 3 L33: 0.6106 L12: 0.5624 REMARK 3 L13: 0.4526 L23: 0.1581 REMARK 3 S TENSOR REMARK 3 S11: 0.0230 S12: -0.0382 S13: -0.2259 REMARK 3 S21: 0.0979 S22: -0.0978 S23: -0.0628 REMARK 3 S31: -0.0578 S32: 0.2192 S33: 0.0748 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 60 REMARK 3 ORIGIN FOR THE GROUP (A): 16.6832 -12.5878 2.6704 REMARK 3 T TENSOR REMARK 3 T11: 0.1871 T22: 0.1221 REMARK 3 T33: 0.0855 T12: 0.0197 REMARK 3 T13: 0.0325 T23: -0.0071 REMARK 3 L TENSOR REMARK 3 L11: 1.3489 L22: 2.5835 REMARK 3 L33: 0.5606 L12: -0.9507 REMARK 3 L13: 0.3334 L23: -0.1808 REMARK 3 S TENSOR REMARK 3 S11: -0.0138 S12: -0.0493 S13: 0.0198 REMARK 3 S21: -0.1360 S22: 0.0759 S23: 0.0132 REMARK 3 S31: -0.0148 S32: -0.0955 S33: -0.0621 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 61 B 67 REMARK 3 ORIGIN FOR THE GROUP (A): 4.3660 -16.9907 6.5874 REMARK 3 T TENSOR REMARK 3 T11: 0.2520 T22: 0.3686 REMARK 3 T33: 0.1773 T12: -0.1655 REMARK 3 T13: -0.0305 T23: 0.0630 REMARK 3 L TENSOR REMARK 3 L11: 19.9764 L22: 3.0870 REMARK 3 L33: 34.2890 L12: -6.9859 REMARK 3 L13: 21.0640 L23: -4.5789 REMARK 3 S TENSOR REMARK 3 S11: -0.0601 S12: -0.3283 S13: 0.5657 REMARK 3 S21: 0.0130 S22: 0.0421 S23: -0.3296 REMARK 3 S31: -0.0072 S32: -0.5625 S33: 0.0180 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 68 B 124 REMARK 3 ORIGIN FOR THE GROUP (A): 16.7686 -13.6203 13.5064 REMARK 3 T TENSOR REMARK 3 T11: 0.1567 T22: 0.2239 REMARK 3 T33: 0.0991 T12: 0.0190 REMARK 3 T13: 0.0577 T23: 0.0454 REMARK 3 L TENSOR REMARK 3 L11: 1.6748 L22: 2.3412 REMARK 3 L33: 1.7500 L12: 0.4335 REMARK 3 L13: -0.4677 L23: -1.7719 REMARK 3 S TENSOR REMARK 3 S11: -0.0804 S12: -0.1702 S13: -0.0752 REMARK 3 S21: -0.0945 S22: 0.1677 S23: -0.0952 REMARK 3 S31: -0.0813 S32: -0.3002 S33: -0.0874 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 4L2M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JUN-13. REMARK 100 THE DEPOSITION ID IS D_1000080102. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MERIDIONALLY-BENT FUSED SILICA REMARK 200 MIRROR WITH PALLADIUM AND REMARK 200 UNCOATED STRIPES VERTICALLY- REMARK 200 FOCUSING AT 6.6:1 DEMAGNIFICATION REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12396 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.10800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.31 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 0.45600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.890 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1S69 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1% V/V ISOPROPANOL, 2 M AMMONIUM REMARK 280 SULFATE, PH 5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 20.47550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 3 151.31 -48.14 REMARK 500 THR A 80 -168.54 -163.74 REMARK 500 THR B 80 -152.44 -143.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEB A 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 70 NE2 REMARK 620 2 HEB A 201 NA 89.5 REMARK 620 3 HEB A 201 NB 90.6 89.0 REMARK 620 4 HEB A 201 NC 88.7 178.1 90.4 REMARK 620 5 HEB A 201 ND 87.5 90.4 178.0 90.1 REMARK 620 6 CYN A 202 C 176.8 93.8 89.5 88.0 92.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEB B 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 70 NE2 REMARK 620 2 HEB B 201 NA 88.3 REMARK 620 3 HEB B 201 NB 86.0 88.8 REMARK 620 4 HEB B 201 NC 94.6 177.0 90.7 REMARK 620 5 HEB B 201 ND 95.7 91.3 178.3 89.2 REMARK 620 6 CYN B 202 C 174.5 92.1 88.5 84.9 89.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEB A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CYN A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEB B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CYN B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 204 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4I0V RELATED DB: PDB REMARK 900 RELATED ID: 1S69 RELATED DB: PDB REMARK 900 RELATED ID: 1RTX RELATED DB: PDB REMARK 900 RELATED ID: 1DLY RELATED DB: PDB REMARK 900 RELATED ID: 2KSC RELATED DB: PDB DBREF 4L2M A 2 124 UNP Q8RT58 Q8RT58_SYNP2 2 124 DBREF 4L2M B 2 124 UNP Q8RT58 Q8RT58_SYNP2 2 124 SEQRES 1 A 123 ALA SER LEU TYR GLU LYS LEU GLY GLY ALA ALA ALA VAL SEQRES 2 A 123 ASP LEU ALA VAL GLU LYS PHE TYR GLY LYS VAL LEU ALA SEQRES 3 A 123 ASP GLU ARG VAL ASN ARG PHE PHE VAL ASN THR ASP MET SEQRES 4 A 123 ALA LYS GLN LYS GLN HIS GLN LYS ASP PHE MET THR TYR SEQRES 5 A 123 ALA PHE GLY GLY THR ASP ARG PHE PRO GLY ARG SER MET SEQRES 6 A 123 ARG ALA ALA HIS GLN ASP LEU VAL GLU ASN ALA GLY LEU SEQRES 7 A 123 THR ASP VAL HIS PHE ASP ALA ILE ALA GLU ASN LEU VAL SEQRES 8 A 123 LEU THR LEU GLN GLU LEU ASN VAL SER GLN ASP LEU ILE SEQRES 9 A 123 ASP GLU VAL VAL THR ILE VAL GLY SER VAL GLN HIS ARG SEQRES 10 A 123 ASN ASP VAL LEU ASN ARG SEQRES 1 B 123 ALA SER LEU TYR GLU LYS LEU GLY GLY ALA ALA ALA VAL SEQRES 2 B 123 ASP LEU ALA VAL GLU LYS PHE TYR GLY LYS VAL LEU ALA SEQRES 3 B 123 ASP GLU ARG VAL ASN ARG PHE PHE VAL ASN THR ASP MET SEQRES 4 B 123 ALA LYS GLN LYS GLN HIS GLN LYS ASP PHE MET THR TYR SEQRES 5 B 123 ALA PHE GLY GLY THR ASP ARG PHE PRO GLY ARG SER MET SEQRES 6 B 123 ARG ALA ALA HIS GLN ASP LEU VAL GLU ASN ALA GLY LEU SEQRES 7 B 123 THR ASP VAL HIS PHE ASP ALA ILE ALA GLU ASN LEU VAL SEQRES 8 B 123 LEU THR LEU GLN GLU LEU ASN VAL SER GLN ASP LEU ILE SEQRES 9 B 123 ASP GLU VAL VAL THR ILE VAL GLY SER VAL GLN HIS ARG SEQRES 10 B 123 ASN ASP VAL LEU ASN ARG HET HEB A 201 43 HET CYN A 202 2 HET SO4 A 203 5 HET HEB B 201 43 HET CYN B 202 2 HET SO4 B 203 5 HET SO4 B 204 5 HETNAM HEB HEME B/C HETNAM CYN CYANIDE ION HETNAM SO4 SULFATE ION HETSYN HEB HYBRID BETWEEN B AND C TYPE HEMES (PROTOPORPHYRIN IX HETSYN 2 HEB CONTAINING FE) FORMUL 3 HEB 2(C34 H34 FE N4 O4) FORMUL 4 CYN 2(C N 1-) FORMUL 5 SO4 3(O4 S 2-) FORMUL 10 HOH *37(H2 O) HELIX 1 1 SER A 3 GLY A 9 1 7 HELIX 2 2 GLY A 9 ALA A 27 1 19 HELIX 3 3 VAL A 31 VAL A 36 5 6 HELIX 4 4 ASP A 39 PHE A 55 1 17 HELIX 5 5 SER A 65 ASN A 76 1 12 HELIX 6 6 THR A 80 LEU A 98 1 19 HELIX 7 7 SER A 101 GLY A 113 1 13 HELIX 8 8 SER A 114 LEU A 122 1 9 HELIX 9 9 SER B 3 LEU B 8 1 6 HELIX 10 10 GLY B 10 ALA B 27 1 18 HELIX 11 11 VAL B 31 VAL B 36 5 6 HELIX 12 12 ASP B 39 PHE B 55 1 17 HELIX 13 13 SER B 65 ALA B 77 1 13 HELIX 14 14 THR B 80 LEU B 98 1 19 HELIX 15 15 SER B 101 GLY B 113 1 13 HELIX 16 16 SER B 114 ASN B 123 1 10 LINK NE2 HIS A 117 CAB HEB A 201 1555 1555 1.36 LINK NE2 HIS B 117 CAB HEB B 201 1555 1555 1.35 LINK NE2 HIS A 70 FE HEB A 201 1555 1555 2.05 LINK FE HEB A 201 C CYN A 202 1555 1555 1.88 LINK NE2 HIS B 70 FE HEB B 201 1555 1555 2.10 LINK FE HEB B 201 C CYN B 202 1555 1555 1.88 SITE 1 AC1 17 PHE A 34 PHE A 35 GLN A 43 GLN A 47 SITE 2 AC1 17 PHE A 50 GLY A 63 ARG A 64 MET A 66 SITE 3 AC1 17 HIS A 70 LEU A 73 LEU A 79 HIS A 83 SITE 4 AC1 17 PHE A 84 ILE A 87 HIS A 117 VAL A 121 SITE 5 AC1 17 CYN A 202 SITE 1 AC2 4 TYR A 22 GLN A 43 GLN A 47 HEB A 201 SITE 1 AC3 4 ARG A 33 SER A 101 GLN A 102 ASP A 103 SITE 1 AC4 21 VAL B 31 PHE B 34 PHE B 35 THR B 38 SITE 2 AC4 21 GLN B 43 HIS B 46 GLN B 47 PHE B 50 SITE 3 AC4 21 GLY B 63 ARG B 64 MET B 66 ALA B 69 SITE 4 AC4 21 HIS B 70 LEU B 73 LEU B 79 HIS B 83 SITE 5 AC4 21 PHE B 84 ILE B 87 HIS B 117 VAL B 121 SITE 6 AC4 21 CYN B 202 SITE 1 AC5 4 TYR B 22 GLN B 43 GLN B 47 HEB B 201 SITE 1 AC6 1 GLN B 102 SITE 1 AC7 3 SER B 65 ARG B 67 ALA B 68 CRYST1 50.622 40.951 66.461 90.00 111.21 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019754 0.000000 0.007667 0.00000 SCALE2 0.000000 0.024419 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016140 0.00000