data_4L3R # _entry.id 4L3R # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4L3R pdb_00004l3r 10.2210/pdb4l3r/pdb RCSB RCSB080143 ? ? WWPDB D_1000080143 ? ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id JCSG-417679 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 4L3R _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-06-06 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category FoldIt _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of a hypothetical protein (BACEGG_01241) from Bacteroides eggerthii DSM 20697 at 2.23 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 4L3R _cell.length_a 57.892 _cell.length_b 59.174 _cell.length_c 102.308 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4L3R _symmetry.Int_Tables_number 19 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uncharacterized protein' 16398.002 2 ? ? 'UNP residues 28-172' ? 2 water nat water 18.015 151 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GNEDDV(MSE)EIFNDKTWKLSRITTEKGKEQFYQGLWSNEAEEKASRELLKITENFTLNFNCADVNGEVTGTVSAHAVK ANISDAILKIDGKEHTISISGKAYGSESDKLAKVFISGLFNVFKYEGDVHNLTLYFKDGNTTKV(MSE)GFTAR ; _entity_poly.pdbx_seq_one_letter_code_can ;GNEDDVMEIFNDKTWKLSRITTEKGKEQFYQGLWSNEAEEKASRELLKITENFTLNFNCADVNGEVTGTVSAHAVKANIS DAILKIDGKEHTISISGKAYGSESDKLAKVFISGLFNVFKYEGDVHNLTLYFKDGNTTKVMGFTAR ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier JCSG-417679 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ASN n 1 3 GLU n 1 4 ASP n 1 5 ASP n 1 6 VAL n 1 7 MSE n 1 8 GLU n 1 9 ILE n 1 10 PHE n 1 11 ASN n 1 12 ASP n 1 13 LYS n 1 14 THR n 1 15 TRP n 1 16 LYS n 1 17 LEU n 1 18 SER n 1 19 ARG n 1 20 ILE n 1 21 THR n 1 22 THR n 1 23 GLU n 1 24 LYS n 1 25 GLY n 1 26 LYS n 1 27 GLU n 1 28 GLN n 1 29 PHE n 1 30 TYR n 1 31 GLN n 1 32 GLY n 1 33 LEU n 1 34 TRP n 1 35 SER n 1 36 ASN n 1 37 GLU n 1 38 ALA n 1 39 GLU n 1 40 GLU n 1 41 LYS n 1 42 ALA n 1 43 SER n 1 44 ARG n 1 45 GLU n 1 46 LEU n 1 47 LEU n 1 48 LYS n 1 49 ILE n 1 50 THR n 1 51 GLU n 1 52 ASN n 1 53 PHE n 1 54 THR n 1 55 LEU n 1 56 ASN n 1 57 PHE n 1 58 ASN n 1 59 CYS n 1 60 ALA n 1 61 ASP n 1 62 VAL n 1 63 ASN n 1 64 GLY n 1 65 GLU n 1 66 VAL n 1 67 THR n 1 68 GLY n 1 69 THR n 1 70 VAL n 1 71 SER n 1 72 ALA n 1 73 HIS n 1 74 ALA n 1 75 VAL n 1 76 LYS n 1 77 ALA n 1 78 ASN n 1 79 ILE n 1 80 SER n 1 81 ASP n 1 82 ALA n 1 83 ILE n 1 84 LEU n 1 85 LYS n 1 86 ILE n 1 87 ASP n 1 88 GLY n 1 89 LYS n 1 90 GLU n 1 91 HIS n 1 92 THR n 1 93 ILE n 1 94 SER n 1 95 ILE n 1 96 SER n 1 97 GLY n 1 98 LYS n 1 99 ALA n 1 100 TYR n 1 101 GLY n 1 102 SER n 1 103 GLU n 1 104 SER n 1 105 ASP n 1 106 LYS n 1 107 LEU n 1 108 ALA n 1 109 LYS n 1 110 VAL n 1 111 PHE n 1 112 ILE n 1 113 SER n 1 114 GLY n 1 115 LEU n 1 116 PHE n 1 117 ASN n 1 118 VAL n 1 119 PHE n 1 120 LYS n 1 121 TYR n 1 122 GLU n 1 123 GLY n 1 124 ASP n 1 125 VAL n 1 126 HIS n 1 127 ASN n 1 128 LEU n 1 129 THR n 1 130 LEU n 1 131 TYR n 1 132 PHE n 1 133 LYS n 1 134 ASP n 1 135 GLY n 1 136 ASN n 1 137 THR n 1 138 THR n 1 139 LYS n 1 140 VAL n 1 141 MSE n 1 142 GLY n 1 143 PHE n 1 144 THR n 1 145 ALA n 1 146 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BACEGG_01241 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'DSM 20697' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacteroides eggerthii' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 483216 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain PB1 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code B7AF65_9BACE _struct_ref.pdbx_db_accession B7AF65 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;NEDDVMEIFNDKTWKLSRITTEKGKEQFYQGLWSNEAEEKASRELLKITENFTLNFNCADVNGEVTGTVSAHAVKANISD AILKIDGKEHTISISGKAYGSESDKLAKVFISGLFNVFKYEGDVHNLTLYFKDGNTTKVMGFTAR ; _struct_ref.pdbx_align_begin 28 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4L3R A 2 ? 146 ? B7AF65 28 ? 172 ? 28 172 2 1 4L3R B 2 ? 146 ? B7AF65 28 ? 172 ? 28 172 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4L3R GLY A 1 ? UNP B7AF65 ? ? 'expression tag' 0 1 2 4L3R GLY B 1 ? UNP B7AF65 ? ? 'expression tag' 0 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 4L3R # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.67 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 53.96 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '0.1M citric acid pH 5, 20% polyethylene glycol 6000, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.details 'Flat mirror (vertical focusing); single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_detector.pdbx_collection_date 2013-03-21 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'single crystal Si(111) bent' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97949 1.0 3 0.97886 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list 0.91837,0.97949,0.97886 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 4L3R _reflns.d_resolution_high 2.23 _reflns.d_resolution_low 29.383 _reflns.number_obs 17344 _reflns.pdbx_Rmerge_I_obs 0.028 _reflns.pdbx_netI_over_sigmaI 15.480 _reflns.percent_possible_obs 95.000 _reflns.B_iso_Wilson_estimate 61.075 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.230 2.310 5971 ? 3103 0.532 1.4 ? ? ? ? ? 93.300 1 1 2.310 2.400 5609 ? 2967 0.381 2.0 ? ? ? ? ? 92.500 2 1 2.400 2.510 6581 ? 3280 0.261 2.7 ? ? ? ? ? 98.300 3 1 2.510 2.640 6296 ? 3162 0.169 4.2 ? ? ? ? ? 97.200 4 1 2.640 2.810 6604 ? 3299 0.106 6.6 ? ? ? ? ? 96.900 5 1 2.810 3.020 5729 ? 2989 0.063 10.8 ? ? ? ? ? 93.500 6 1 3.020 3.330 6466 ? 3252 0.038 17.9 ? ? ? ? ? 95.600 7 1 3.330 3.810 6372 ? 3174 0.023 29.4 ? ? ? ? ? 96.000 8 1 3.810 4.780 5761 ? 3003 0.018 37.2 ? ? ? ? ? 92.000 9 1 4.780 29.383 6450 ? 3198 0.014 42.9 ? ? ? ? ? 94.600 10 1 # _refine.entry_id 4L3R _refine.ls_d_res_high 2.2300 _refine.ls_d_res_low 29.383 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 97.6300 _refine.ls_number_reflns_obs 17307 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. ZERO OCCUPANCY HYDROGENS WERE INCLUDED DURING REFINEMENT TO IMPROVE THE ANTI-BUMPING RESTRAINTS. 2. ATOM RECORDS CONTAIN SUM OF TLS AND RESIDUAL B FACTORS. 3. ANISOU RECORDS CONTAIN SUM OF TLS AND RESIDUAL U FACTORS. 4. WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT. 5. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 6. MAD PHASE RESTRAINTS WERE USED DURING REFINEMENT. 7. NCS RESTRAINTS WERE APPLIED DURING REFINEMENT USING LSSR (-AUTONCS) IN BUSTER. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1999 _refine.ls_R_factor_R_work 0.1982 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2323 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.0600 _refine.ls_number_reflns_R_free 876 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 68.3649 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 8.0549 _refine.aniso_B[2][2] -12.3633 _refine.aniso_B[3][3] 4.3083 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9528 _refine.correlation_coeff_Fo_to_Fc_free 0.9365 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.solvent_model_details ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 162.480 _refine.B_iso_min 42.930 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.220 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4L3R _refine_analyze.Luzzati_coordinate_error_obs 0.390 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2251 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 151 _refine_hist.number_atoms_total 2402 _refine_hist.d_res_high 2.2300 _refine_hist.d_res_low 29.383 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id t_dihedral_angle_d 1291 ? ? 2.000 SINUSOIDAL 'X-RAY DIFFRACTION' t_trig_c_planes 69 ? ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_gen_planes 667 ? ? 5.000 HARMONIC 'X-RAY DIFFRACTION' t_it 4534 ? ? 20.000 HARMONIC 'X-RAY DIFFRACTION' t_nbd ? ? ? ? ? 'X-RAY DIFFRACTION' t_improper_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_pseud_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_chiral_improper_torsion 310 ? ? 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_sum_occupancies ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_distance ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_ideal_dist_contact 4508 ? ? 4.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_bond_d 4534 0.007 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_angle_deg 8188 0.930 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_omega_torsion ? 3.020 ? ? ? 'X-RAY DIFFRACTION' t_other_torsion ? 2.670 ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.2300 _refine_ls_shell.d_res_low 2.3700 _refine_ls_shell.pdbx_total_number_of_bins_used 9 _refine_ls_shell.percent_reflns_obs 97.6300 _refine_ls_shell.number_reflns_R_work 2582 _refine_ls_shell.R_factor_all 0.2477 _refine_ls_shell.R_factor_R_work 0.2464 _refine_ls_shell.R_factor_R_free 0.2725 _refine_ls_shell.percent_reflns_R_free 4.7600 _refine_ls_shell.number_reflns_R_free 129 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2711 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.title 'Crystal structure of a DUF4847 family protein (BACEGG_01241) from Bacteroides eggerthii DSM 20697 at 2.23 A resolution' _struct.entry_id 4L3R _struct.pdbx_model_type_details ? _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.text ;PF16139 family, DUF4847, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, UNKNOWN FUNCTION ; _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.entry_id 4L3R # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 _struct_biol.details 'CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A DIMER AS THE SIGNIFICANT OLIGOMERIZATION STATE.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 5 ? PHE A 10 ? ASP A 31 PHE A 36 5 ? 6 HELX_P HELX_P2 2 ASN A 36 ? ILE A 49 ? ASN A 62 ILE A 75 1 ? 14 HELX_P HELX_P3 3 ASP A 105 ? ASN A 117 ? ASP A 131 ASN A 143 1 ? 13 HELX_P HELX_P4 4 ASP B 4 ? ASN B 11 ? ASP B 30 ASN B 37 1 ? 8 HELX_P HELX_P5 5 ASN B 36 ? ILE B 49 ? ASN B 62 ILE B 75 1 ? 14 HELX_P HELX_P6 6 ASP B 105 ? ASN B 117 ? ASP B 131 ASN B 143 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 59 SG ? ? ? 1_555 B CYS 59 SG ? ? A CYS 85 B CYS 85 1_555 ? ? ? ? ? ? ? 2.053 ? ? covale1 covale both ? A VAL 6 C ? ? ? 1_555 A MSE 7 N ? ? A VAL 32 A MSE 33 1_555 ? ? ? ? ? ? ? 1.345 ? ? covale2 covale both ? A MSE 7 C ? ? ? 1_555 A GLU 8 N ? ? A MSE 33 A GLU 34 1_555 ? ? ? ? ? ? ? 1.356 ? ? covale3 covale both ? A VAL 140 C ? ? ? 1_555 A MSE 141 N ? ? A VAL 166 A MSE 167 1_555 ? ? ? ? ? ? ? 1.347 ? ? covale4 covale both ? A MSE 141 C ? ? ? 1_555 A GLY 142 N ? ? A MSE 167 A GLY 168 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale5 covale both ? B VAL 6 C ? ? ? 1_555 B MSE 7 N ? ? B VAL 32 B MSE 33 1_555 ? ? ? ? ? ? ? 1.353 ? ? covale6 covale both ? B MSE 7 C ? ? ? 1_555 B GLU 8 N ? ? B MSE 33 B GLU 34 1_555 ? ? ? ? ? ? ? 1.352 ? ? covale7 covale both ? B VAL 140 C ? ? ? 1_555 B MSE 141 N ? ? B VAL 166 B MSE 167 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale8 covale both ? B MSE 141 C ? ? ? 1_555 B GLY 142 N ? ? B MSE 167 B GLY 168 1_555 ? ? ? ? ? ? ? 1.325 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 9 ? B ? 9 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel B 8 9 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TRP A 15 ? THR A 22 ? TRP A 41 THR A 48 A 2 THR A 54 ? VAL A 62 ? THR A 80 VAL A 88 A 3 GLU A 65 ? HIS A 73 ? GLU A 91 HIS A 99 A 4 ASN A 78 ? ASP A 87 ? ASN A 104 ASP A 113 A 5 THR A 92 ? SER A 96 ? THR A 118 SER A 122 A 6 VAL A 118 ? GLY A 123 ? VAL A 144 GLY A 149 A 7 ASN A 127 ? ASP A 134 ? ASN A 153 ASP A 160 A 8 THR A 137 ? THR A 144 ? THR A 163 THR A 170 A 9 TRP A 15 ? THR A 22 ? TRP A 41 THR A 48 B 1 TRP B 15 ? THR B 22 ? TRP B 41 THR B 48 B 2 THR B 54 ? ASP B 61 ? THR B 80 ASP B 87 B 3 VAL B 66 ? HIS B 73 ? VAL B 92 HIS B 99 B 4 ASN B 78 ? ASP B 87 ? ASN B 104 ASP B 113 B 5 THR B 92 ? SER B 96 ? THR B 118 SER B 122 B 6 VAL B 118 ? GLY B 123 ? VAL B 144 GLY B 149 B 7 ASN B 127 ? ASP B 134 ? ASN B 153 ASP B 160 B 8 THR B 137 ? THR B 144 ? THR B 163 THR B 170 B 9 TRP B 15 ? THR B 22 ? TRP B 41 THR B 48 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TRP A 15 ? N TRP A 41 O LEU A 55 ? O LEU A 81 A 2 3 N ASN A 58 ? N ASN A 84 O THR A 69 ? O THR A 95 A 3 4 N VAL A 70 ? N VAL A 96 O ALA A 82 ? O ALA A 108 A 4 5 N LYS A 85 ? N LYS A 111 O SER A 94 ? O SER A 120 A 5 6 N ILE A 93 ? N ILE A 119 O PHE A 119 ? O PHE A 145 A 6 7 N GLU A 122 ? N GLU A 148 O THR A 129 ? O THR A 155 A 7 8 N LEU A 128 ? N LEU A 154 O PHE A 143 ? O PHE A 169 A 8 9 O THR A 144 ? O THR A 170 N LYS A 16 ? N LYS A 42 B 1 2 N TRP B 15 ? N TRP B 41 O LEU B 55 ? O LEU B 81 B 2 3 N ASN B 58 ? N ASN B 84 O THR B 69 ? O THR B 95 B 3 4 N VAL B 70 ? N VAL B 96 O ALA B 82 ? O ALA B 108 B 4 5 N LYS B 85 ? N LYS B 111 O SER B 94 ? O SER B 120 B 5 6 N ILE B 93 ? N ILE B 119 O PHE B 119 ? O PHE B 145 B 6 7 N GLU B 122 ? N GLU B 148 O THR B 129 ? O THR B 155 B 7 8 N LEU B 128 ? N LEU B 154 O PHE B 143 ? O PHE B 169 B 8 9 O THR B 144 ? O THR B 170 N LYS B 16 ? N LYS B 42 # _atom_sites.entry_id 4L3R _atom_sites.fract_transf_matrix[1][1] 0.017274 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016899 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009774 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 ASN 2 28 ? ? ? A . n A 1 3 GLU 3 29 ? ? ? A . n A 1 4 ASP 4 30 30 ASP ASP A . n A 1 5 ASP 5 31 31 ASP ASP A . n A 1 6 VAL 6 32 32 VAL VAL A . n A 1 7 MSE 7 33 33 MSE MSE A . n A 1 8 GLU 8 34 34 GLU GLU A . n A 1 9 ILE 9 35 35 ILE ILE A . n A 1 10 PHE 10 36 36 PHE PHE A . n A 1 11 ASN 11 37 37 ASN ASN A . n A 1 12 ASP 12 38 38 ASP ASP A . n A 1 13 LYS 13 39 39 LYS LYS A . n A 1 14 THR 14 40 40 THR THR A . n A 1 15 TRP 15 41 41 TRP TRP A . n A 1 16 LYS 16 42 42 LYS LYS A . n A 1 17 LEU 17 43 43 LEU LEU A . n A 1 18 SER 18 44 44 SER SER A . n A 1 19 ARG 19 45 45 ARG ARG A . n A 1 20 ILE 20 46 46 ILE ILE A . n A 1 21 THR 21 47 47 THR THR A . n A 1 22 THR 22 48 48 THR THR A . n A 1 23 GLU 23 49 49 GLU GLU A . n A 1 24 LYS 24 50 50 LYS LYS A . n A 1 25 GLY 25 51 51 GLY GLY A . n A 1 26 LYS 26 52 52 LYS LYS A . n A 1 27 GLU 27 53 53 GLU GLU A . n A 1 28 GLN 28 54 54 GLN GLN A . n A 1 29 PHE 29 55 55 PHE PHE A . n A 1 30 TYR 30 56 56 TYR TYR A . n A 1 31 GLN 31 57 57 GLN GLN A . n A 1 32 GLY 32 58 58 GLY GLY A . n A 1 33 LEU 33 59 59 LEU LEU A . n A 1 34 TRP 34 60 60 TRP TRP A . n A 1 35 SER 35 61 61 SER SER A . n A 1 36 ASN 36 62 62 ASN ASN A . n A 1 37 GLU 37 63 63 GLU GLU A . n A 1 38 ALA 38 64 64 ALA ALA A . n A 1 39 GLU 39 65 65 GLU GLU A . n A 1 40 GLU 40 66 66 GLU GLU A . n A 1 41 LYS 41 67 67 LYS LYS A . n A 1 42 ALA 42 68 68 ALA ALA A . n A 1 43 SER 43 69 69 SER SER A . n A 1 44 ARG 44 70 70 ARG ARG A . n A 1 45 GLU 45 71 71 GLU GLU A . n A 1 46 LEU 46 72 72 LEU LEU A . n A 1 47 LEU 47 73 73 LEU LEU A . n A 1 48 LYS 48 74 74 LYS LYS A . n A 1 49 ILE 49 75 75 ILE ILE A . n A 1 50 THR 50 76 76 THR THR A . n A 1 51 GLU 51 77 77 GLU GLU A . n A 1 52 ASN 52 78 78 ASN ASN A . n A 1 53 PHE 53 79 79 PHE PHE A . n A 1 54 THR 54 80 80 THR THR A . n A 1 55 LEU 55 81 81 LEU LEU A . n A 1 56 ASN 56 82 82 ASN ASN A . n A 1 57 PHE 57 83 83 PHE PHE A . n A 1 58 ASN 58 84 84 ASN ASN A . n A 1 59 CYS 59 85 85 CYS CYS A . n A 1 60 ALA 60 86 86 ALA ALA A . n A 1 61 ASP 61 87 87 ASP ASP A . n A 1 62 VAL 62 88 88 VAL VAL A . n A 1 63 ASN 63 89 89 ASN ASN A . n A 1 64 GLY 64 90 90 GLY GLY A . n A 1 65 GLU 65 91 91 GLU GLU A . n A 1 66 VAL 66 92 92 VAL VAL A . n A 1 67 THR 67 93 93 THR THR A . n A 1 68 GLY 68 94 94 GLY GLY A . n A 1 69 THR 69 95 95 THR THR A . n A 1 70 VAL 70 96 96 VAL VAL A . n A 1 71 SER 71 97 97 SER SER A . n A 1 72 ALA 72 98 98 ALA ALA A . n A 1 73 HIS 73 99 99 HIS HIS A . n A 1 74 ALA 74 100 100 ALA ALA A . n A 1 75 VAL 75 101 101 VAL VAL A . n A 1 76 LYS 76 102 102 LYS LYS A . n A 1 77 ALA 77 103 103 ALA ALA A . n A 1 78 ASN 78 104 104 ASN ASN A . n A 1 79 ILE 79 105 105 ILE ILE A . n A 1 80 SER 80 106 106 SER SER A . n A 1 81 ASP 81 107 107 ASP ASP A . n A 1 82 ALA 82 108 108 ALA ALA A . n A 1 83 ILE 83 109 109 ILE ILE A . n A 1 84 LEU 84 110 110 LEU LEU A . n A 1 85 LYS 85 111 111 LYS LYS A . n A 1 86 ILE 86 112 112 ILE ILE A . n A 1 87 ASP 87 113 113 ASP ASP A . n A 1 88 GLY 88 114 114 GLY GLY A . n A 1 89 LYS 89 115 115 LYS LYS A . n A 1 90 GLU 90 116 116 GLU GLU A . n A 1 91 HIS 91 117 117 HIS HIS A . n A 1 92 THR 92 118 118 THR THR A . n A 1 93 ILE 93 119 119 ILE ILE A . n A 1 94 SER 94 120 120 SER SER A . n A 1 95 ILE 95 121 121 ILE ILE A . n A 1 96 SER 96 122 122 SER SER A . n A 1 97 GLY 97 123 123 GLY GLY A . n A 1 98 LYS 98 124 124 LYS LYS A . n A 1 99 ALA 99 125 125 ALA ALA A . n A 1 100 TYR 100 126 126 TYR TYR A . n A 1 101 GLY 101 127 127 GLY GLY A . n A 1 102 SER 102 128 128 SER SER A . n A 1 103 GLU 103 129 129 GLU GLU A . n A 1 104 SER 104 130 130 SER SER A . n A 1 105 ASP 105 131 131 ASP ASP A . n A 1 106 LYS 106 132 132 LYS LYS A . n A 1 107 LEU 107 133 133 LEU LEU A . n A 1 108 ALA 108 134 134 ALA ALA A . n A 1 109 LYS 109 135 135 LYS LYS A . n A 1 110 VAL 110 136 136 VAL VAL A . n A 1 111 PHE 111 137 137 PHE PHE A . n A 1 112 ILE 112 138 138 ILE ILE A . n A 1 113 SER 113 139 139 SER SER A . n A 1 114 GLY 114 140 140 GLY GLY A . n A 1 115 LEU 115 141 141 LEU LEU A . n A 1 116 PHE 116 142 142 PHE PHE A . n A 1 117 ASN 117 143 143 ASN ASN A . n A 1 118 VAL 118 144 144 VAL VAL A . n A 1 119 PHE 119 145 145 PHE PHE A . n A 1 120 LYS 120 146 146 LYS LYS A . n A 1 121 TYR 121 147 147 TYR TYR A . n A 1 122 GLU 122 148 148 GLU GLU A . n A 1 123 GLY 123 149 149 GLY GLY A . n A 1 124 ASP 124 150 150 ASP ASP A . n A 1 125 VAL 125 151 151 VAL VAL A . n A 1 126 HIS 126 152 152 HIS HIS A . n A 1 127 ASN 127 153 153 ASN ASN A . n A 1 128 LEU 128 154 154 LEU LEU A . n A 1 129 THR 129 155 155 THR THR A . n A 1 130 LEU 130 156 156 LEU LEU A . n A 1 131 TYR 131 157 157 TYR TYR A . n A 1 132 PHE 132 158 158 PHE PHE A . n A 1 133 LYS 133 159 159 LYS LYS A . n A 1 134 ASP 134 160 160 ASP ASP A . n A 1 135 GLY 135 161 161 GLY GLY A . n A 1 136 ASN 136 162 162 ASN ASN A . n A 1 137 THR 137 163 163 THR THR A . n A 1 138 THR 138 164 164 THR THR A . n A 1 139 LYS 139 165 165 LYS LYS A . n A 1 140 VAL 140 166 166 VAL VAL A . n A 1 141 MSE 141 167 167 MSE MSE A . n A 1 142 GLY 142 168 168 GLY GLY A . n A 1 143 PHE 143 169 169 PHE PHE A . n A 1 144 THR 144 170 170 THR THR A . n A 1 145 ALA 145 171 171 ALA ALA A . n A 1 146 ARG 146 172 172 ARG ARG A . n B 1 1 GLY 1 0 ? ? ? B . n B 1 2 ASN 2 28 ? ? ? B . n B 1 3 GLU 3 29 29 GLU GLU B . n B 1 4 ASP 4 30 30 ASP ASP B . n B 1 5 ASP 5 31 31 ASP ASP B . n B 1 6 VAL 6 32 32 VAL VAL B . n B 1 7 MSE 7 33 33 MSE MSE B . n B 1 8 GLU 8 34 34 GLU GLU B . n B 1 9 ILE 9 35 35 ILE ILE B . n B 1 10 PHE 10 36 36 PHE PHE B . n B 1 11 ASN 11 37 37 ASN ASN B . n B 1 12 ASP 12 38 38 ASP ASP B . n B 1 13 LYS 13 39 39 LYS LYS B . n B 1 14 THR 14 40 40 THR THR B . n B 1 15 TRP 15 41 41 TRP TRP B . n B 1 16 LYS 16 42 42 LYS LYS B . n B 1 17 LEU 17 43 43 LEU LEU B . n B 1 18 SER 18 44 44 SER SER B . n B 1 19 ARG 19 45 45 ARG ARG B . n B 1 20 ILE 20 46 46 ILE ILE B . n B 1 21 THR 21 47 47 THR THR B . n B 1 22 THR 22 48 48 THR THR B . n B 1 23 GLU 23 49 49 GLU GLU B . n B 1 24 LYS 24 50 50 LYS LYS B . n B 1 25 GLY 25 51 51 GLY GLY B . n B 1 26 LYS 26 52 52 LYS LYS B . n B 1 27 GLU 27 53 53 GLU GLU B . n B 1 28 GLN 28 54 54 GLN GLN B . n B 1 29 PHE 29 55 55 PHE PHE B . n B 1 30 TYR 30 56 56 TYR TYR B . n B 1 31 GLN 31 57 57 GLN GLN B . n B 1 32 GLY 32 58 58 GLY GLY B . n B 1 33 LEU 33 59 59 LEU LEU B . n B 1 34 TRP 34 60 60 TRP TRP B . n B 1 35 SER 35 61 61 SER SER B . n B 1 36 ASN 36 62 62 ASN ASN B . n B 1 37 GLU 37 63 63 GLU GLU B . n B 1 38 ALA 38 64 64 ALA ALA B . n B 1 39 GLU 39 65 65 GLU GLU B . n B 1 40 GLU 40 66 66 GLU GLU B . n B 1 41 LYS 41 67 67 LYS LYS B . n B 1 42 ALA 42 68 68 ALA ALA B . n B 1 43 SER 43 69 69 SER SER B . n B 1 44 ARG 44 70 70 ARG ARG B . n B 1 45 GLU 45 71 71 GLU GLU B . n B 1 46 LEU 46 72 72 LEU LEU B . n B 1 47 LEU 47 73 73 LEU LEU B . n B 1 48 LYS 48 74 74 LYS LYS B . n B 1 49 ILE 49 75 75 ILE ILE B . n B 1 50 THR 50 76 76 THR THR B . n B 1 51 GLU 51 77 77 GLU GLU B . n B 1 52 ASN 52 78 78 ASN ASN B . n B 1 53 PHE 53 79 79 PHE PHE B . n B 1 54 THR 54 80 80 THR THR B . n B 1 55 LEU 55 81 81 LEU LEU B . n B 1 56 ASN 56 82 82 ASN ASN B . n B 1 57 PHE 57 83 83 PHE PHE B . n B 1 58 ASN 58 84 84 ASN ASN B . n B 1 59 CYS 59 85 85 CYS CYS B . n B 1 60 ALA 60 86 86 ALA ALA B . n B 1 61 ASP 61 87 87 ASP ASP B . n B 1 62 VAL 62 88 88 VAL VAL B . n B 1 63 ASN 63 89 89 ASN ASN B . n B 1 64 GLY 64 90 90 GLY GLY B . n B 1 65 GLU 65 91 91 GLU GLU B . n B 1 66 VAL 66 92 92 VAL VAL B . n B 1 67 THR 67 93 93 THR THR B . n B 1 68 GLY 68 94 94 GLY GLY B . n B 1 69 THR 69 95 95 THR THR B . n B 1 70 VAL 70 96 96 VAL VAL B . n B 1 71 SER 71 97 97 SER SER B . n B 1 72 ALA 72 98 98 ALA ALA B . n B 1 73 HIS 73 99 99 HIS HIS B . n B 1 74 ALA 74 100 100 ALA ALA B . n B 1 75 VAL 75 101 101 VAL VAL B . n B 1 76 LYS 76 102 102 LYS LYS B . n B 1 77 ALA 77 103 103 ALA ALA B . n B 1 78 ASN 78 104 104 ASN ASN B . n B 1 79 ILE 79 105 105 ILE ILE B . n B 1 80 SER 80 106 106 SER SER B . n B 1 81 ASP 81 107 107 ASP ASP B . n B 1 82 ALA 82 108 108 ALA ALA B . n B 1 83 ILE 83 109 109 ILE ILE B . n B 1 84 LEU 84 110 110 LEU LEU B . n B 1 85 LYS 85 111 111 LYS LYS B . n B 1 86 ILE 86 112 112 ILE ILE B . n B 1 87 ASP 87 113 113 ASP ASP B . n B 1 88 GLY 88 114 114 GLY GLY B . n B 1 89 LYS 89 115 115 LYS LYS B . n B 1 90 GLU 90 116 116 GLU GLU B . n B 1 91 HIS 91 117 117 HIS HIS B . n B 1 92 THR 92 118 118 THR THR B . n B 1 93 ILE 93 119 119 ILE ILE B . n B 1 94 SER 94 120 120 SER SER B . n B 1 95 ILE 95 121 121 ILE ILE B . n B 1 96 SER 96 122 122 SER SER B . n B 1 97 GLY 97 123 123 GLY GLY B . n B 1 98 LYS 98 124 124 LYS LYS B . n B 1 99 ALA 99 125 125 ALA ALA B . n B 1 100 TYR 100 126 126 TYR TYR B . n B 1 101 GLY 101 127 127 GLY GLY B . n B 1 102 SER 102 128 128 SER SER B . n B 1 103 GLU 103 129 129 GLU GLU B . n B 1 104 SER 104 130 130 SER SER B . n B 1 105 ASP 105 131 131 ASP ASP B . n B 1 106 LYS 106 132 132 LYS LYS B . n B 1 107 LEU 107 133 133 LEU LEU B . n B 1 108 ALA 108 134 134 ALA ALA B . n B 1 109 LYS 109 135 135 LYS LYS B . n B 1 110 VAL 110 136 136 VAL VAL B . n B 1 111 PHE 111 137 137 PHE PHE B . n B 1 112 ILE 112 138 138 ILE ILE B . n B 1 113 SER 113 139 139 SER SER B . n B 1 114 GLY 114 140 140 GLY GLY B . n B 1 115 LEU 115 141 141 LEU LEU B . n B 1 116 PHE 116 142 142 PHE PHE B . n B 1 117 ASN 117 143 143 ASN ASN B . n B 1 118 VAL 118 144 144 VAL VAL B . n B 1 119 PHE 119 145 145 PHE PHE B . n B 1 120 LYS 120 146 146 LYS LYS B . n B 1 121 TYR 121 147 147 TYR TYR B . n B 1 122 GLU 122 148 148 GLU GLU B . n B 1 123 GLY 123 149 149 GLY GLY B . n B 1 124 ASP 124 150 150 ASP ASP B . n B 1 125 VAL 125 151 151 VAL VAL B . n B 1 126 HIS 126 152 152 HIS HIS B . n B 1 127 ASN 127 153 153 ASN ASN B . n B 1 128 LEU 128 154 154 LEU LEU B . n B 1 129 THR 129 155 155 THR THR B . n B 1 130 LEU 130 156 156 LEU LEU B . n B 1 131 TYR 131 157 157 TYR TYR B . n B 1 132 PHE 132 158 158 PHE PHE B . n B 1 133 LYS 133 159 159 LYS LYS B . n B 1 134 ASP 134 160 160 ASP ASP B . n B 1 135 GLY 135 161 161 GLY GLY B . n B 1 136 ASN 136 162 162 ASN ASN B . n B 1 137 THR 137 163 163 THR THR B . n B 1 138 THR 138 164 164 THR THR B . n B 1 139 LYS 139 165 165 LYS LYS B . n B 1 140 VAL 140 166 166 VAL VAL B . n B 1 141 MSE 141 167 167 MSE MSE B . n B 1 142 GLY 142 168 168 GLY GLY B . n B 1 143 PHE 143 169 169 PHE PHE B . n B 1 144 THR 144 170 170 THR THR B . n B 1 145 ALA 145 171 171 ALA ALA B . n B 1 146 ARG 146 172 172 ARG ARG B . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 201 200 HOH HOH A . C 2 HOH 2 202 201 HOH HOH A . C 2 HOH 3 203 202 HOH HOH A . C 2 HOH 4 204 203 HOH HOH A . C 2 HOH 5 205 204 HOH HOH A . C 2 HOH 6 206 205 HOH HOH A . C 2 HOH 7 207 206 HOH HOH A . C 2 HOH 8 208 207 HOH HOH A . C 2 HOH 9 209 208 HOH HOH A . C 2 HOH 10 210 209 HOH HOH A . C 2 HOH 11 211 210 HOH HOH A . C 2 HOH 12 212 211 HOH HOH A . C 2 HOH 13 213 212 HOH HOH A . C 2 HOH 14 214 213 HOH HOH A . C 2 HOH 15 215 214 HOH HOH A . C 2 HOH 16 216 215 HOH HOH A . C 2 HOH 17 217 216 HOH HOH A . C 2 HOH 18 218 239 HOH HOH A . C 2 HOH 19 219 240 HOH HOH A . C 2 HOH 20 220 241 HOH HOH A . C 2 HOH 21 221 244 HOH HOH A . C 2 HOH 22 222 246 HOH HOH A . C 2 HOH 23 223 247 HOH HOH A . C 2 HOH 24 224 251 HOH HOH A . C 2 HOH 25 225 253 HOH HOH A . C 2 HOH 26 226 255 HOH HOH A . C 2 HOH 27 227 256 HOH HOH A . C 2 HOH 28 228 259 HOH HOH A . C 2 HOH 29 229 260 HOH HOH A . C 2 HOH 30 230 264 HOH HOH A . C 2 HOH 31 231 266 HOH HOH A . C 2 HOH 32 232 267 HOH HOH A . C 2 HOH 33 233 268 HOH HOH A . C 2 HOH 34 234 269 HOH HOH A . C 2 HOH 35 235 270 HOH HOH A . C 2 HOH 36 236 271 HOH HOH A . C 2 HOH 37 237 273 HOH HOH A . C 2 HOH 38 238 275 HOH HOH A . C 2 HOH 39 239 277 HOH HOH A . C 2 HOH 40 240 278 HOH HOH A . C 2 HOH 41 241 284 HOH HOH A . C 2 HOH 42 242 285 HOH HOH A . C 2 HOH 43 243 286 HOH HOH A . C 2 HOH 44 244 287 HOH HOH A . C 2 HOH 45 245 288 HOH HOH A . C 2 HOH 46 246 290 HOH HOH A . C 2 HOH 47 247 291 HOH HOH A . C 2 HOH 48 248 294 HOH HOH A . C 2 HOH 49 249 298 HOH HOH A . C 2 HOH 50 250 299 HOH HOH A . C 2 HOH 51 251 302 HOH HOH A . C 2 HOH 52 252 305 HOH HOH A . C 2 HOH 53 253 307 HOH HOH A . C 2 HOH 54 254 308 HOH HOH A . C 2 HOH 55 255 313 HOH HOH A . C 2 HOH 56 256 315 HOH HOH A . C 2 HOH 57 257 321 HOH HOH A . C 2 HOH 58 258 322 HOH HOH A . C 2 HOH 59 259 323 HOH HOH A . C 2 HOH 60 260 328 HOH HOH A . C 2 HOH 61 261 329 HOH HOH A . C 2 HOH 62 262 330 HOH HOH A . C 2 HOH 63 263 332 HOH HOH A . C 2 HOH 64 264 333 HOH HOH A . C 2 HOH 65 265 334 HOH HOH A . C 2 HOH 66 266 338 HOH HOH A . C 2 HOH 67 267 339 HOH HOH A . C 2 HOH 68 268 340 HOH HOH A . C 2 HOH 69 269 341 HOH HOH A . C 2 HOH 70 270 346 HOH HOH A . C 2 HOH 71 271 347 HOH HOH A . D 2 HOH 1 201 217 HOH HOH B . D 2 HOH 2 202 218 HOH HOH B . D 2 HOH 3 203 219 HOH HOH B . D 2 HOH 4 204 220 HOH HOH B . D 2 HOH 5 205 221 HOH HOH B . D 2 HOH 6 206 222 HOH HOH B . D 2 HOH 7 207 223 HOH HOH B . D 2 HOH 8 208 224 HOH HOH B . D 2 HOH 9 209 225 HOH HOH B . D 2 HOH 10 210 226 HOH HOH B . D 2 HOH 11 211 227 HOH HOH B . D 2 HOH 12 212 228 HOH HOH B . D 2 HOH 13 213 229 HOH HOH B . D 2 HOH 14 214 230 HOH HOH B . D 2 HOH 15 215 231 HOH HOH B . D 2 HOH 16 216 232 HOH HOH B . D 2 HOH 17 217 233 HOH HOH B . D 2 HOH 18 218 234 HOH HOH B . D 2 HOH 19 219 235 HOH HOH B . D 2 HOH 20 220 236 HOH HOH B . D 2 HOH 21 221 237 HOH HOH B . D 2 HOH 22 222 238 HOH HOH B . D 2 HOH 23 223 242 HOH HOH B . D 2 HOH 24 224 243 HOH HOH B . D 2 HOH 25 225 245 HOH HOH B . D 2 HOH 26 226 248 HOH HOH B . D 2 HOH 27 227 249 HOH HOH B . D 2 HOH 28 228 250 HOH HOH B . D 2 HOH 29 229 252 HOH HOH B . D 2 HOH 30 230 254 HOH HOH B . D 2 HOH 31 231 257 HOH HOH B . D 2 HOH 32 232 258 HOH HOH B . D 2 HOH 33 233 261 HOH HOH B . D 2 HOH 34 234 262 HOH HOH B . D 2 HOH 35 235 263 HOH HOH B . D 2 HOH 36 236 265 HOH HOH B . D 2 HOH 37 237 272 HOH HOH B . D 2 HOH 38 238 274 HOH HOH B . D 2 HOH 39 239 276 HOH HOH B . D 2 HOH 40 240 279 HOH HOH B . D 2 HOH 41 241 280 HOH HOH B . D 2 HOH 42 242 281 HOH HOH B . D 2 HOH 43 243 282 HOH HOH B . D 2 HOH 44 244 283 HOH HOH B . D 2 HOH 45 245 289 HOH HOH B . D 2 HOH 46 246 292 HOH HOH B . D 2 HOH 47 247 293 HOH HOH B . D 2 HOH 48 248 295 HOH HOH B . D 2 HOH 49 249 296 HOH HOH B . D 2 HOH 50 250 297 HOH HOH B . D 2 HOH 51 251 300 HOH HOH B . D 2 HOH 52 252 301 HOH HOH B . D 2 HOH 53 253 303 HOH HOH B . D 2 HOH 54 254 304 HOH HOH B . D 2 HOH 55 255 306 HOH HOH B . D 2 HOH 56 256 309 HOH HOH B . D 2 HOH 57 257 310 HOH HOH B . D 2 HOH 58 258 311 HOH HOH B . D 2 HOH 59 259 312 HOH HOH B . D 2 HOH 60 260 314 HOH HOH B . D 2 HOH 61 261 316 HOH HOH B . D 2 HOH 62 262 317 HOH HOH B . D 2 HOH 63 263 318 HOH HOH B . D 2 HOH 64 264 319 HOH HOH B . D 2 HOH 65 265 320 HOH HOH B . D 2 HOH 66 266 324 HOH HOH B . D 2 HOH 67 267 325 HOH HOH B . D 2 HOH 68 268 326 HOH HOH B . D 2 HOH 69 269 327 HOH HOH B . D 2 HOH 70 270 331 HOH HOH B . D 2 HOH 71 271 335 HOH HOH B . D 2 HOH 72 272 336 HOH HOH B . D 2 HOH 73 273 337 HOH HOH B . D 2 HOH 74 274 342 HOH HOH B . D 2 HOH 75 275 343 HOH HOH B . D 2 HOH 76 276 344 HOH HOH B . D 2 HOH 77 277 345 HOH HOH B . D 2 HOH 78 278 348 HOH HOH B . D 2 HOH 79 279 349 HOH HOH B . D 2 HOH 80 280 350 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 7 A MSE 33 ? MET SELENOMETHIONINE 2 A MSE 141 A MSE 167 ? MET SELENOMETHIONINE 3 B MSE 7 B MSE 33 ? MET SELENOMETHIONINE 4 B MSE 141 B MSE 167 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1190 ? 1 MORE -9 ? 1 'SSA (A^2)' 15400 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-07-10 2 'Structure model' 1 1 2014-12-24 3 'Structure model' 1 2 2017-11-15 4 'Structure model' 1 3 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' database_2 3 4 'Structure model' struct_conn 4 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 15.1729 1.1789 54.6926 -0.2671 -0.0279 -0.2294 0.0638 -0.0039 0.0388 6.0452 3.1581 6.8966 0.8498 -3.5953 -0.4987 0.0576 0.0332 -0.0908 -0.2089 0.2171 -0.1602 0.1060 0.1346 0.2509 'X-RAY DIFFRACTION' 2 ? refined -14.7714 -0.3995 78.9599 -0.2307 -0.0573 -0.2049 -0.0547 -0.0241 0.0431 4.9563 3.3502 6.9790 -1.1967 -3.4933 1.3276 0.0825 -0.0639 -0.0186 0.1216 0.2177 0.0608 -0.2176 -0.1274 -0.1938 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 30 A 172 '{ A|30 - A|172 }' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 29 B 172 '{ B|29 - B|172 }' ? ? ? ? ? # _phasing.method MAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 4 SHARP . ? package 'Eric de La Fortelle' sharp-develop@globalphasing.com phasing http://www.globalphasing.com/sharp/ ? ? 5 XSCALE 'July 4, 2012' ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 6 BUSTER-TNT 2.10.0 ? program 'Gerard Bricogne' buster-develop@GlobalPhasing.com refinement http://www.globalphasing.com/buster/ ? ? 7 XDS . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 BUSTER 2.10.0 ? ? ? ? refinement ? ? ? # _pdbx_entry_details.entry_id 4L3R _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 28-172 OF THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 38 ? ? 36.55 62.20 2 1 ALA A 100 ? ? -91.15 -93.48 3 1 VAL A 101 ? ? -127.98 -71.86 4 1 ASP B 38 ? ? 38.07 66.67 5 1 ALA B 100 ? ? -91.31 -93.73 6 1 VAL B 101 ? ? -127.60 -71.47 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 172 ? CG ? A ARG 146 CG 2 1 Y 1 A ARG 172 ? CD ? A ARG 146 CD 3 1 Y 1 A ARG 172 ? NE ? A ARG 146 NE 4 1 Y 1 A ARG 172 ? CZ ? A ARG 146 CZ 5 1 Y 1 A ARG 172 ? NH1 ? A ARG 146 NH1 6 1 Y 1 A ARG 172 ? NH2 ? A ARG 146 NH2 7 1 Y 1 B ARG 172 ? CG ? B ARG 146 CG 8 1 Y 1 B ARG 172 ? CD ? B ARG 146 CD 9 1 Y 1 B ARG 172 ? NE ? B ARG 146 NE 10 1 Y 1 B ARG 172 ? CZ ? B ARG 146 CZ 11 1 Y 1 B ARG 172 ? NH1 ? B ARG 146 NH1 12 1 Y 1 B ARG 172 ? NH2 ? B ARG 146 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A ASN 28 ? A ASN 2 3 1 Y 1 A GLU 29 ? A GLU 3 4 1 Y 1 B GLY 0 ? B GLY 1 5 1 Y 1 B ASN 28 ? B ASN 2 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #