HEADER OXIDOREDUCTASE 07-JUN-13 4L4F TITLE STRUCTURE OF CYANIDE AND CAMPHOR BOUND P450CAM MUTANT TITLE 2 L358A/K178G/D182N COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAMPHOR 5-MONOOXYGENASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CYTOCHROME P450-CAM, CYTOCHROME P450CAM; COMPND 5 EC: 1.14.15.1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA; SOURCE 3 ORGANISM_TAXID: 303; SOURCE 4 GENE: CAMC, CYP101; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MONO-OXYGENASE, CYTOCHROME P450, CYANIDE COMPLEX, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR D.BATABYAL,H.LI,T.L.POULOS REVDAT 4 20-SEP-23 4L4F 1 REMARK SEQADV LINK REVDAT 3 15-NOV-17 4L4F 1 REMARK REVDAT 2 28-AUG-13 4L4F 1 JRNL REVDAT 1 31-JUL-13 4L4F 0 JRNL AUTH D.BATABYAL,H.LI,T.L.POULOS JRNL TITL SYNERGISTIC EFFECTS OF MUTATIONS IN CYTOCHROME P450CAM JRNL TITL 2 DESIGNED TO MIMIC CYP101D1. JRNL REF BIOCHEMISTRY V. 52 5396 2013 JRNL REFN ISSN 0006-2960 JRNL PMID 23865948 JRNL DOI 10.1021/BI400676D REMARK 2 REMARK 2 RESOLUTION. 1.29 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.29 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.45 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 3 NUMBER OF REFLECTIONS : 95394 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4770 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.4589 - 4.0187 0.91 3194 142 0.1772 0.1854 REMARK 3 2 4.0187 - 3.1906 0.97 3214 179 0.1826 0.2121 REMARK 3 3 3.1906 - 2.7875 0.99 3231 173 0.2034 0.2144 REMARK 3 4 2.7875 - 2.5327 0.99 3240 171 0.1969 0.2071 REMARK 3 5 2.5327 - 2.3512 0.97 3136 168 0.1875 0.2173 REMARK 3 6 2.3512 - 2.2126 0.96 3127 146 0.1795 0.1839 REMARK 3 7 2.2126 - 2.1018 0.96 3083 181 0.1880 0.2008 REMARK 3 8 2.1018 - 2.0104 0.96 3035 177 0.1861 0.2213 REMARK 3 9 2.0104 - 1.9330 0.96 3071 165 0.1985 0.2165 REMARK 3 10 1.9330 - 1.8663 0.96 3073 185 0.1943 0.1965 REMARK 3 11 1.8663 - 1.8079 0.96 3064 142 0.1977 0.2371 REMARK 3 12 1.8079 - 1.7563 0.96 3061 157 0.1979 0.2307 REMARK 3 13 1.7563 - 1.7100 0.95 3087 157 0.1988 0.2437 REMARK 3 14 1.7100 - 1.6683 0.96 2999 195 0.1966 0.2257 REMARK 3 15 1.6683 - 1.6304 0.95 3064 158 0.1990 0.2451 REMARK 3 16 1.6304 - 1.5957 0.94 3019 148 0.1975 0.2301 REMARK 3 17 1.5957 - 1.5638 0.94 2984 170 0.2100 0.2147 REMARK 3 18 1.5638 - 1.5343 0.93 2936 159 0.2035 0.2373 REMARK 3 19 1.5343 - 1.5069 0.92 2948 140 0.2117 0.2522 REMARK 3 20 1.5069 - 1.4813 0.93 2942 148 0.2183 0.2317 REMARK 3 21 1.4813 - 1.4574 0.92 2913 149 0.2144 0.2555 REMARK 3 22 1.4574 - 1.4350 0.92 2957 151 0.2147 0.2288 REMARK 3 23 1.4350 - 1.4139 0.93 2924 159 0.2228 0.2362 REMARK 3 24 1.4139 - 1.3940 0.93 2975 155 0.2365 0.2463 REMARK 3 25 1.3940 - 1.3751 0.94 2952 157 0.2376 0.2885 REMARK 3 26 1.3751 - 1.3573 0.93 2929 146 0.2483 0.2819 REMARK 3 27 1.3573 - 1.3403 0.93 2992 161 0.2647 0.2530 REMARK 3 28 1.3403 - 1.3242 0.94 2968 138 0.2707 0.3068 REMARK 3 29 1.3242 - 1.3088 0.94 2921 157 0.2869 0.3054 REMARK 3 30 1.3088 - 1.2941 0.81 2585 136 0.3112 0.3227 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.880 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3339 REMARK 3 ANGLE : 1.196 4549 REMARK 3 CHIRALITY : 0.083 488 REMARK 3 PLANARITY : 0.006 601 REMARK 3 DIHEDRAL : 14.892 1242 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 10 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.5941 5.9865 15.6223 REMARK 3 T TENSOR REMARK 3 T11: 0.1139 T22: 0.1240 REMARK 3 T33: 0.0917 T12: -0.0085 REMARK 3 T13: -0.0132 T23: -0.0027 REMARK 3 L TENSOR REMARK 3 L11: 0.8233 L22: 2.1193 REMARK 3 L33: 0.8596 L12: 0.1702 REMARK 3 L13: 0.1994 L23: 0.1278 REMARK 3 S TENSOR REMARK 3 S11: -0.0265 S12: 0.1495 S13: 0.0064 REMARK 3 S21: -0.3373 S22: 0.0671 S23: 0.0942 REMARK 3 S31: 0.0391 S32: -0.0064 S33: -0.0307 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 121 THROUGH 266 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.4150 28.6991 23.8015 REMARK 3 T TENSOR REMARK 3 T11: 0.1064 T22: 0.1341 REMARK 3 T33: 0.1785 T12: 0.0116 REMARK 3 T13: -0.0046 T23: 0.0229 REMARK 3 L TENSOR REMARK 3 L11: 0.6247 L22: 1.6869 REMARK 3 L33: 1.6389 L12: 0.0872 REMARK 3 L13: 0.3201 L23: 0.2812 REMARK 3 S TENSOR REMARK 3 S11: -0.0938 S12: 0.1056 S13: 0.1676 REMARK 3 S21: -0.2243 S22: 0.0129 S23: 0.1692 REMARK 3 S31: -0.1523 S32: -0.1143 S33: 0.0568 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 267 THROUGH 414 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.6931 12.8093 31.4432 REMARK 3 T TENSOR REMARK 3 T11: 0.0602 T22: 0.0838 REMARK 3 T33: 0.0897 T12: -0.0005 REMARK 3 T13: -0.0001 T23: 0.0023 REMARK 3 L TENSOR REMARK 3 L11: 0.4833 L22: 1.6425 REMARK 3 L33: 1.4222 L12: 0.0206 REMARK 3 L13: -0.0010 L23: 0.7678 REMARK 3 S TENSOR REMARK 3 S11: -0.0133 S12: -0.0204 S13: 0.0175 REMARK 3 S21: 0.0725 S22: 0.0537 S23: -0.0588 REMARK 3 S31: 0.0528 S32: 0.0226 S33: -0.0381 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4L4F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JUN-13. REMARK 100 THE DEPOSITION ID IS D_1000080167. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-MAY-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 95488 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.294 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 35.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.29 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.67000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2CPP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM TRIS, 400 MM POTASSIUM CHLORIDE, REMARK 280 32% PEG4000, 1.2 MM D-CAMPHOR, PH 7.4, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.28250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.02150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 51.70650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.02150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.28250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 51.70650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 THR A 1 REMARK 465 THR A 2 REMARK 465 GLU A 3 REMARK 465 THR A 4 REMARK 465 ILE A 5 REMARK 465 GLN A 6 REMARK 465 SER A 7 REMARK 465 ASN A 8 REMARK 465 ALA A 9 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1014 O HOH A 1023 1655 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 30 65.11 -165.11 REMARK 500 LYS A 126 -47.55 176.76 REMARK 500 TYR A 154 -52.89 -141.81 REMARK 500 ASN A 229 66.19 17.33 REMARK 500 ASP A 251 -55.76 -127.28 REMARK 500 LEU A 294 -0.89 -144.23 REMARK 500 ASP A 297 -158.98 -116.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 505 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 45 O REMARK 620 2 VAL A 50 O 112.9 REMARK 620 3 PRO A 51 O 112.2 64.8 REMARK 620 4 THR A 66 OG1 87.2 138.6 74.3 REMARK 620 5 HOH A 668 O 97.0 70.1 132.9 146.0 REMARK 620 6 HOH A 726 O 159.4 62.9 85.0 109.3 62.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 504 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 84 O REMARK 620 2 GLY A 93 O 85.4 REMARK 620 3 GLU A 94 O 158.9 78.2 REMARK 620 4 TYR A 96 O 99.4 88.0 93.3 REMARK 620 5 HOH A1108 O 84.5 101.3 85.7 170.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 357 SG REMARK 620 2 HEM A 501 NA 95.4 REMARK 620 3 HEM A 501 NB 87.3 91.0 REMARK 620 4 HEM A 501 NC 85.5 178.8 89.8 REMARK 620 5 HEM A 501 ND 92.8 86.8 177.8 92.4 REMARK 620 6 CYN A 502 C 170.4 93.1 88.3 86.0 91.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CYN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CAM A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 505 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4L49 RELATED DB: PDB REMARK 900 RELATED ID: 4L4A RELATED DB: PDB REMARK 900 RELATED ID: 4L4B RELATED DB: PDB REMARK 900 RELATED ID: 4L4C RELATED DB: PDB REMARK 900 RELATED ID: 4L4D RELATED DB: PDB REMARK 900 RELATED ID: 4L4E RELATED DB: PDB REMARK 900 RELATED ID: 4L4G RELATED DB: PDB DBREF 4L4F A 0 414 UNP P00183 CPXA_PSEPU 1 415 SEQADV 4L4F GLY A 178 UNP P00183 LYS 179 ENGINEERED MUTATION SEQADV 4L4F ASN A 182 UNP P00183 ASP 183 ENGINEERED MUTATION SEQADV 4L4F ALA A 334 UNP P00183 CYS 335 ENGINEERED MUTATION SEQADV 4L4F ALA A 358 UNP P00183 LEU 359 ENGINEERED MUTATION SEQRES 1 A 415 MET THR THR GLU THR ILE GLN SER ASN ALA ASN LEU ALA SEQRES 2 A 415 PRO LEU PRO PRO HIS VAL PRO GLU HIS LEU VAL PHE ASP SEQRES 3 A 415 PHE ASP MET TYR ASN PRO SER ASN LEU SER ALA GLY VAL SEQRES 4 A 415 GLN GLU ALA TRP ALA VAL LEU GLN GLU SER ASN VAL PRO SEQRES 5 A 415 ASP LEU VAL TRP THR ARG CYS ASN GLY GLY HIS TRP ILE SEQRES 6 A 415 ALA THR ARG GLY GLN LEU ILE ARG GLU ALA TYR GLU ASP SEQRES 7 A 415 TYR ARG HIS PHE SER SER GLU CYS PRO PHE ILE PRO ARG SEQRES 8 A 415 GLU ALA GLY GLU ALA TYR ASP PHE ILE PRO THR SER MET SEQRES 9 A 415 ASP PRO PRO GLU GLN ARG GLN PHE ARG ALA LEU ALA ASN SEQRES 10 A 415 GLN VAL VAL GLY MET PRO VAL VAL ASP LYS LEU GLU ASN SEQRES 11 A 415 ARG ILE GLN GLU LEU ALA CYS SER LEU ILE GLU SER LEU SEQRES 12 A 415 ARG PRO GLN GLY GLN CYS ASN PHE THR GLU ASP TYR ALA SEQRES 13 A 415 GLU PRO PHE PRO ILE ARG ILE PHE MET LEU LEU ALA GLY SEQRES 14 A 415 LEU PRO GLU GLU ASP ILE PRO HIS LEU GLY TYR LEU THR SEQRES 15 A 415 ASN GLN MET THR ARG PRO ASP GLY SER MET THR PHE ALA SEQRES 16 A 415 GLU ALA LYS GLU ALA LEU TYR ASP TYR LEU ILE PRO ILE SEQRES 17 A 415 ILE GLU GLN ARG ARG GLN LYS PRO GLY THR ASP ALA ILE SEQRES 18 A 415 SER ILE VAL ALA ASN GLY GLN VAL ASN GLY ARG PRO ILE SEQRES 19 A 415 THR SER ASP GLU ALA LYS ARG MET CYS GLY LEU LEU LEU SEQRES 20 A 415 VAL GLY GLY LEU ASP THR VAL VAL ASN PHE LEU SER PHE SEQRES 21 A 415 SER MET GLU PHE LEU ALA LYS SER PRO GLU HIS ARG GLN SEQRES 22 A 415 GLU LEU ILE GLU ARG PRO GLU ARG ILE PRO ALA ALA CYS SEQRES 23 A 415 GLU GLU LEU LEU ARG ARG PHE SER LEU VAL ALA ASP GLY SEQRES 24 A 415 ARG ILE LEU THR SER ASP TYR GLU PHE HIS GLY VAL GLN SEQRES 25 A 415 LEU LYS LYS GLY ASP GLN ILE LEU LEU PRO GLN MET LEU SEQRES 26 A 415 SER GLY LEU ASP GLU ARG GLU ASN ALA ALA PRO MET HIS SEQRES 27 A 415 VAL ASP PHE SER ARG GLN LYS VAL SER HIS THR THR PHE SEQRES 28 A 415 GLY HIS GLY SER HIS LEU CYS ALA GLY GLN HIS LEU ALA SEQRES 29 A 415 ARG ARG GLU ILE ILE VAL THR LEU LYS GLU TRP LEU THR SEQRES 30 A 415 ARG ILE PRO ASP PHE SER ILE ALA PRO GLY ALA GLN ILE SEQRES 31 A 415 GLN HIS LYS SER GLY ILE VAL SER GLY VAL GLN ALA LEU SEQRES 32 A 415 PRO LEU VAL TRP ASP PRO ALA THR THR LYS ALA VAL HET HEM A 501 43 HET CYN A 502 2 HET CAM A 503 11 HET K A 504 1 HET K A 505 1 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM CYN CYANIDE ION HETNAM CAM CAMPHOR HETNAM K POTASSIUM ION HETSYN HEM HEME FORMUL 2 HEM C34 H32 FE N4 O4 FORMUL 3 CYN C N 1- FORMUL 4 CAM C10 H16 O FORMUL 5 K 2(K 1+) FORMUL 7 HOH *509(H2 O) HELIX 1 1 PRO A 19 VAL A 23 5 5 HELIX 2 2 ASN A 33 ALA A 36 5 4 HELIX 3 3 GLY A 37 VAL A 44 1 8 HELIX 4 4 LEU A 45 GLU A 47 5 3 HELIX 5 5 ARG A 57 GLY A 61 5 5 HELIX 6 6 ARG A 67 ASP A 77 1 11 HELIX 7 7 PRO A 89 TYR A 96 1 8 HELIX 8 8 GLU A 107 GLY A 120 1 14 HELIX 9 9 GLY A 120 ARG A 143 1 24 HELIX 10 10 PHE A 150 TYR A 154 1 5 HELIX 11 11 GLU A 156 GLY A 168 1 13 HELIX 12 12 PRO A 170 GLU A 172 5 3 HELIX 13 13 ASP A 173 ARG A 186 1 14 HELIX 14 14 THR A 192 LYS A 214 1 23 HELIX 15 15 ASP A 218 ASN A 225 1 8 HELIX 16 16 THR A 234 ASP A 251 1 18 HELIX 17 17 ASP A 251 ALA A 265 1 15 HELIX 18 18 SER A 267 ARG A 277 1 11 HELIX 19 19 ARG A 280 PHE A 292 1 13 HELIX 20 20 PRO A 321 ASP A 328 5 8 HELIX 21 21 HIS A 352 LEU A 356 5 5 HELIX 22 22 GLY A 359 ILE A 378 1 20 HELIX 23 23 ASP A 407 THR A 411 5 5 SHEET 1 A 5 LEU A 53 THR A 56 0 SHEET 2 A 5 HIS A 62 ALA A 65 -1 O HIS A 62 N THR A 56 SHEET 3 A 5 GLN A 317 LEU A 320 1 O LEU A 319 N TRP A 63 SHEET 4 A 5 ASP A 297 LEU A 301 -1 N ARG A 299 O ILE A 318 SHEET 5 A 5 PHE A 81 SER A 82 -1 N SER A 82 O ILE A 300 SHEET 1 B 3 GLN A 147 ASN A 149 0 SHEET 2 B 3 PRO A 403 VAL A 405 -1 O LEU A 404 N CYS A 148 SHEET 3 B 3 SER A 382 ILE A 383 -1 N SER A 382 O VAL A 405 SHEET 1 C 2 GLN A 227 VAL A 228 0 SHEET 2 C 2 ARG A 231 PRO A 232 -1 O ARG A 231 N VAL A 228 SHEET 1 D 2 TYR A 305 PHE A 307 0 SHEET 2 D 2 VAL A 310 LEU A 312 -1 O LEU A 312 N TYR A 305 SHEET 1 E 2 HIS A 391 LYS A 392 0 SHEET 2 E 2 GLY A 398 VAL A 399 -1 O GLY A 398 N LYS A 392 LINK O LEU A 45 K K A 505 1555 1555 2.76 LINK O VAL A 50 K K A 505 1555 1555 2.79 LINK O PRO A 51 K K A 505 1555 1555 2.82 LINK OG1 THR A 66 K K A 505 1555 1555 2.70 LINK O GLU A 84 K K A 504 1555 1555 2.60 LINK O GLY A 93 K K A 504 1555 1555 2.78 LINK O GLU A 94 K K A 504 1555 1555 2.86 LINK O TYR A 96 K K A 504 1555 1555 2.61 LINK SG CYS A 357 FE HEM A 501 1555 1555 2.35 LINK FE HEM A 501 C CYN A 502 1555 1555 2.02 LINK K K A 504 O HOH A1108 1555 1555 2.82 LINK K K A 505 O HOH A 668 1555 1555 2.77 LINK K K A 505 O HOH A 726 1555 1555 2.85 CISPEP 1 ILE A 88 PRO A 89 0 2.95 CISPEP 2 ILE A 99 PRO A 100 0 8.10 CISPEP 3 PRO A 105 PRO A 106 0 -1.16 SITE 1 AC1 21 THR A 101 ARG A 112 LEU A 245 GLY A 248 SITE 2 AC1 21 THR A 252 VAL A 253 LEU A 294 ASP A 297 SITE 3 AC1 21 ARG A 299 GLN A 322 THR A 349 PHE A 350 SITE 4 AC1 21 GLY A 351 HIS A 355 CYS A 357 GLY A 359 SITE 5 AC1 21 ALA A 363 CYN A 502 CAM A 503 HOH A 610 SITE 6 AC1 21 HOH A 628 SITE 1 AC2 5 GLY A 248 THR A 252 HEM A 501 CAM A 503 SITE 2 AC2 5 HOH A 751 SITE 1 AC3 5 PHE A 87 TYR A 96 ASP A 297 HEM A 501 SITE 2 AC3 5 CYN A 502 SITE 1 AC4 6 GLU A 84 GLY A 93 GLU A 94 TYR A 96 SITE 2 AC4 6 HOH A 934 HOH A1108 SITE 1 AC5 6 LEU A 45 VAL A 50 PRO A 51 THR A 66 SITE 2 AC5 6 HOH A 668 HOH A 726 CRYST1 36.565 103.413 106.043 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027349 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009670 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009430 0.00000