HEADER METAL TRANSPORT 07-JUN-13 4L4I TITLE CRYSTAL STRUCTURE OF MOUSE RYANODINE RECEPTOR ISOFORM 2 (RYR2) 1-547 TITLE 2 DISEASE MUTANT R420Q COMPND MOL_ID: 1; COMPND 2 MOLECULE: RYANODINE RECEPTOR 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL DOMAINS (UNP RESIDUES 1-547); COMPND 5 SYNONYM: RYR-2, RYR2, CARDIAC MUSCLE RYANODINE RECEPTOR, CARDIAC COMPND 6 MUSCLE RYANODINE RECEPTOR-CALCIUM RELEASE CHANNEL, TYPE 2 RYANODINE COMPND 7 RECEPTOR, CARDIAC CA2+ RELEASE CHANNEL; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: RYR2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA KEYWDS CA2+ RELEASE, ION CHANNEL, ER/SR MEMBRANE, METAL TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR L.KIMLICKA,F.VAN PETEGEM REVDAT 2 20-SEP-23 4L4I 1 REMARK SEQADV REVDAT 1 24-JUL-13 4L4I 0 JRNL AUTH L.KIMLICKA,C.C.TUNG,A.C.CARLSSON,P.A.LOBO,F.VAN PETEGEM JRNL TITL CRYSTAL STRUCTURE OF RYANODINE RECEPTOR DISEASE MUTANT JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0110 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.89 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 40856 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.230 REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2151 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.20 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2976 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2960 REMARK 3 BIN FREE R VALUE SET COUNT : 157 REMARK 3 BIN FREE R VALUE : 0.3270 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3510 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 64 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : -0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.185 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.171 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.143 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.268 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.917 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3634 ; 0.013 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4951 ; 1.430 ; 1.941 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 482 ; 6.027 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 150 ;35.581 ;23.133 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 542 ;16.908 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;17.806 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 576 ; 0.113 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2750 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2360 ; 0.737 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3722 ; 1.404 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1274 ; 2.256 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1222 ; 3.563 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 11 A 217 REMARK 3 ORIGIN FOR THE GROUP (A): 31.4270 -22.2200 49.2980 REMARK 3 T TENSOR REMARK 3 T11: 0.2162 T22: 0.5044 REMARK 3 T33: 0.1333 T12: 0.1676 REMARK 3 T13: -0.0332 T23: 0.0924 REMARK 3 L TENSOR REMARK 3 L11: 8.7543 L22: 3.1737 REMARK 3 L33: 6.4269 L12: -2.0260 REMARK 3 L13: -0.8218 L23: 0.4732 REMARK 3 S TENSOR REMARK 3 S11: 0.5673 S12: 1.2883 S13: 0.0015 REMARK 3 S21: -0.1649 S22: -0.4233 S23: -0.2225 REMARK 3 S31: -0.0742 S32: -0.5042 S33: -0.1440 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 218 A 409 REMARK 3 ORIGIN FOR THE GROUP (A): 23.9890 -21.6240 18.4540 REMARK 3 T TENSOR REMARK 3 T11: 0.3625 T22: 0.6971 REMARK 3 T33: 0.0683 T12: 0.3047 REMARK 3 T13: 0.0445 T23: 0.0512 REMARK 3 L TENSOR REMARK 3 L11: 6.4721 L22: 3.2536 REMARK 3 L33: 6.2946 L12: -2.0637 REMARK 3 L13: -1.0172 L23: 0.7062 REMARK 3 S TENSOR REMARK 3 S11: -0.0425 S12: -0.5109 S13: -0.4405 REMARK 3 S21: -0.3344 S22: 0.0325 S23: 0.0968 REMARK 3 S31: 0.6994 S32: 0.7611 S33: 0.0099 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 410 A 543 REMARK 3 ORIGIN FOR THE GROUP (A): 6.0020 -8.7930 39.5590 REMARK 3 T TENSOR REMARK 3 T11: 0.2175 T22: 0.3089 REMARK 3 T33: 0.1301 T12: 0.1177 REMARK 3 T13: -0.0135 T23: 0.0052 REMARK 3 L TENSOR REMARK 3 L11: 3.3751 L22: 1.2509 REMARK 3 L33: 5.8541 L12: -0.1585 REMARK 3 L13: -1.5113 L23: 0.2051 REMARK 3 S TENSOR REMARK 3 S11: 0.0353 S12: -0.0180 S13: 0.0920 REMARK 3 S21: 0.0319 S22: 0.0556 S23: -0.0178 REMARK 3 S31: 0.4165 S32: 0.2676 S33: -0.0909 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4L4I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-JUN-13. REMARK 100 THE DEPOSITION ID IS D_1000080170. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-DEC-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43007 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 14.30 REMARK 200 R MERGE (I) : 0.10300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 14.70 REMARK 200 R MERGE FOR SHELL (I) : 1.88800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4L4H REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS, PH 8.15, 5-10% PEG3350, 1% REMARK 280 ETHANOL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294.0K, PH REMARK 280 8.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 39.02500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 39.02500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 124.05000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 39.02500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 39.02500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 124.05000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 39.02500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 39.02500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 124.05000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 39.02500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 39.02500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 124.05000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 746 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ASP A 3 REMARK 465 ALA A 4 REMARK 465 GLY A 5 REMARK 465 GLU A 6 REMARK 465 GLY A 7 REMARK 465 GLU A 8 REMARK 465 ASP A 9 REMARK 465 GLU A 10 REMARK 465 ARG A 76 REMARK 465 ALA A 77 REMARK 465 LEU A 78 REMARK 465 GLN A 79 REMARK 465 GLU A 80 REMARK 465 MET A 81 REMARK 465 LEU A 82 REMARK 465 ALA A 83 REMARK 465 ASN A 84 REMARK 465 THR A 85 REMARK 465 VAL A 86 REMARK 465 GLU A 87 REMARK 465 LYS A 88 REMARK 465 SER A 89 REMARK 465 GLU A 90 REMARK 465 GLY A 91 REMARK 465 GLN A 92 REMARK 465 VAL A 93 REMARK 465 ASP A 94 REMARK 465 VAL A 95 REMARK 465 GLU A 96 REMARK 465 LYS A 97 REMARK 465 TRP A 98 REMARK 465 LYS A 99 REMARK 465 PHE A 100 REMARK 465 MET A 101 REMARK 465 MET A 102 REMARK 465 LYS A 103 REMARK 465 THR A 104 REMARK 465 ALA A 105 REMARK 465 GLN A 106 REMARK 465 GLY A 107 REMARK 465 GLY A 108 REMARK 465 GLY A 109 REMARK 465 ARG A 137 REMARK 465 SER A 138 REMARK 465 SER A 139 REMARK 465 THR A 140 REMARK 465 ASP A 141 REMARK 465 GLU A 310 REMARK 465 ASP A 311 REMARK 465 LEU A 338 REMARK 465 ASP A 339 REMARK 465 VAL A 340 REMARK 465 GLY A 341 REMARK 465 VAL A 342 REMARK 465 ARG A 343 REMARK 465 LYS A 344 REMARK 465 GLU A 345 REMARK 465 LYS A 380 REMARK 465 SER A 381 REMARK 465 ALA A 382 REMARK 465 ARG A 383 REMARK 465 MET A 384 REMARK 465 GLY A 385 REMARK 465 LYS A 439 REMARK 465 VAL A 440 REMARK 465 LYS A 441 REMARK 465 LEU A 442 REMARK 465 PRO A 443 REMARK 465 ASN A 544 REMARK 465 ARG A 545 REMARK 465 LYS A 546 REMARK 465 ASN A 547 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 11 CG1 CG2 CD1 REMARK 470 ASP A 17 CG OD1 OD2 REMARK 470 GLU A 19 CG CD OE1 OE2 REMARK 470 ILE A 28 CG1 CG2 CD1 REMARK 470 HIS A 29 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 30 CG CD CE NZ REMARK 470 GLU A 31 CG CD OE1 OE2 REMARK 470 GLN A 32 CG CD OE1 NE2 REMARK 470 GLN A 33 CG CD OE1 NE2 REMARK 470 LYS A 34 CG CD CE NZ REMARK 470 GLU A 40 CG CD OE1 OE2 REMARK 470 SER A 53 OG REMARK 470 ASN A 54 CG OD1 ND2 REMARK 470 LYS A 56 CG CD CE NZ REMARK 470 ASN A 57 CG OD1 ND2 REMARK 470 GLU A 70 CG CD OE1 OE2 REMARK 470 ARG A 111 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 122 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 142 CG CD CE NZ REMARK 470 GLU A 151 CG CD OE1 OE2 REMARK 470 GLU A 156 CG CD OE1 OE2 REMARK 470 LYS A 167 CG CD CE NZ REMARK 470 GLN A 168 CG CD OE1 NE2 REMARK 470 GLU A 171 CG CD OE1 OE2 REMARK 470 LYS A 174 CG CD CE NZ REMARK 470 ARG A 176 CG CD NE CZ NH1 NH2 REMARK 470 TYR A 196 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASN A 198 CG OD1 ND2 REMARK 470 SER A 199 OG REMARK 470 GLU A 222 CG CD OE1 OE2 REMARK 470 HIS A 240 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 251 CG CD OE1 OE2 REMARK 470 GLU A 254 CG CD OE1 OE2 REMARK 470 GLU A 255 CG CD OE1 OE2 REMARK 470 ARG A 281 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 290 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 312 CB CG CD CE NZ REMARK 470 LYS A 319 CG CD CE NZ REMARK 470 LYS A 321 CG CD CE NZ REMARK 470 LYS A 325 CG CD CE NZ REMARK 470 GLU A 336 CG CD OE1 OE2 REMARK 470 LYS A 337 CG CD CE NZ REMARK 470 VAL A 346 CG1 CG2 REMARK 470 THR A 351 OG1 CG2 REMARK 470 SER A 386 OG REMARK 470 ILE A 387 CG1 CG2 CD1 REMARK 470 LYS A 390 CG CD CE NZ REMARK 470 LYS A 438 CG CD CE NZ REMARK 470 THR A 444 OG1 CG2 REMARK 470 GLN A 457 CG CD OE1 NE2 REMARK 470 HIS A 464 CG ND1 CD2 CE1 NE2 REMARK 470 ASP A 467 CG OD1 OD2 REMARK 470 GLU A 468 CG CD OE1 OE2 REMARK 470 HIS A 469 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 471 CG CD OE1 OE2 REMARK 470 HIS A 472 CG ND1 CD2 CE1 NE2 REMARK 470 ASN A 477 CG OD1 ND2 REMARK 470 ARG A 478 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 480 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 483 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 40 -68.95 -100.69 REMARK 500 ASN A 57 -20.85 -143.20 REMARK 500 SER A 72 106.42 -164.81 REMARK 500 ILE A 217 -61.11 -98.47 REMARK 500 ILE A 387 -50.92 -26.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4L4H RELATED DB: PDB DBREF 4L4I A 1 547 UNP E9Q401 RYR2_MOUSE 1 547 SEQADV 4L4I GLN A 420 UNP E9Q401 ARG 420 ENGINEERED MUTATION SEQRES 1 A 547 MET ALA ASP ALA GLY GLU GLY GLU ASP GLU ILE GLN PHE SEQRES 2 A 547 LEU ARG THR ASP ASP GLU VAL VAL LEU GLN CYS THR ALA SEQRES 3 A 547 THR ILE HIS LYS GLU GLN GLN LYS LEU CYS LEU ALA ALA SEQRES 4 A 547 GLU GLY PHE GLY ASN ARG LEU CYS PHE LEU GLU SER THR SEQRES 5 A 547 SER ASN SER LYS ASN VAL PRO PRO ASP LEU SER ILE CYS SEQRES 6 A 547 THR PHE VAL LEU GLU GLN SER LEU SER VAL ARG ALA LEU SEQRES 7 A 547 GLN GLU MET LEU ALA ASN THR VAL GLU LYS SER GLU GLY SEQRES 8 A 547 GLN VAL ASP VAL GLU LYS TRP LYS PHE MET MET LYS THR SEQRES 9 A 547 ALA GLN GLY GLY GLY HIS ARG THR LEU LEU TYR GLY HIS SEQRES 10 A 547 ALA ILE LEU LEU ARG HIS SER TYR SER GLY MET TYR LEU SEQRES 11 A 547 CYS CYS LEU SER THR SER ARG SER SER THR ASP LYS LEU SEQRES 12 A 547 ALA PHE ASP VAL GLY LEU GLN GLU ASP THR THR GLY GLU SEQRES 13 A 547 ALA CYS TRP TRP THR ILE HIS PRO ALA SER LYS GLN ARG SEQRES 14 A 547 SER GLU GLY GLU LYS VAL ARG VAL GLY ASP ASP LEU ILE SEQRES 15 A 547 LEU VAL SER VAL SER SER GLU ARG TYR LEU HIS LEU SER SEQRES 16 A 547 TYR GLY ASN SER SER TRP HIS VAL ASP ALA ALA PHE GLN SEQRES 17 A 547 GLN THR LEU TRP SER VAL ALA PRO ILE SER SER GLY SER SEQRES 18 A 547 GLU ALA ALA GLN GLY TYR LEU ILE GLY GLY ASP VAL LEU SEQRES 19 A 547 ARG LEU LEU HIS GLY HIS MET ASP GLU CYS LEU THR VAL SEQRES 20 A 547 PRO SER GLY GLU HIS GLY GLU GLU GLN ARG ARG THR VAL SEQRES 21 A 547 HIS TYR GLU GLY GLY ALA VAL SER VAL HIS ALA ARG SER SEQRES 22 A 547 LEU TRP ARG LEU GLU THR LEU ARG VAL ALA TRP SER GLY SEQRES 23 A 547 SER HIS ILE ARG TRP GLY GLN PRO PHE ARG LEU ARG HIS SEQRES 24 A 547 VAL THR THR GLY LYS TYR LEU SER LEU MET GLU ASP LYS SEQRES 25 A 547 ASN LEU LEU LEU MET ASP LYS GLU LYS ALA ASP VAL LYS SEQRES 26 A 547 SER THR ALA PHE ALA PHE ARG SER SER LYS GLU LYS LEU SEQRES 27 A 547 ASP VAL GLY VAL ARG LYS GLU VAL ASP GLY MET GLY THR SEQRES 28 A 547 SER GLU ILE LYS TYR GLY ASP SER ILE CYS TYR ILE GLN SEQRES 29 A 547 HIS VAL ASP THR GLY LEU TRP LEU THR TYR GLN ALA VAL SEQRES 30 A 547 ASP VAL LYS SER ALA ARG MET GLY SER ILE GLN ARG LYS SEQRES 31 A 547 ALA ILE MET HIS HIS GLU GLY HIS MET ASP ASP GLY LEU SEQRES 32 A 547 ASN LEU SER ARG SER GLN HIS GLU GLU SER ARG THR ALA SEQRES 33 A 547 ARG VAL ILE GLN SER THR VAL PHE LEU PHE ASN ARG PHE SEQRES 34 A 547 ILE ARG GLY LEU ASP ALA LEU SER LYS LYS VAL LYS LEU SEQRES 35 A 547 PRO THR ILE ASP LEU PRO ILE GLU SER VAL SER LEU SER SEQRES 36 A 547 LEU GLN ASP LEU ILE GLY TYR PHE HIS PRO PRO ASP GLU SEQRES 37 A 547 HIS LEU GLU HIS GLU ASP LYS GLN ASN ARG LEU ARG ALA SEQRES 38 A 547 LEU LYS ASN ARG GLN ASN LEU PHE GLN GLU GLU GLY MET SEQRES 39 A 547 ILE ASN LEU VAL LEU GLU CYS ILE ASP ARG LEU HIS VAL SEQRES 40 A 547 TYR SER SER ALA ALA HIS PHE ALA ASP VAL ALA GLY ARG SEQRES 41 A 547 GLU ALA GLY GLU SER TRP LYS SER ILE LEU ASN SER LEU SEQRES 42 A 547 TYR GLU LEU LEU ALA ALA LEU ILE ARG GLY ASN ARG LYS SEQRES 43 A 547 ASN HET GOL A 601 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL C3 H8 O3 FORMUL 3 HOH *64(H2 O) HELIX 1 1 ASP A 61 CYS A 65 5 5 HELIX 2 2 SER A 221 ALA A 223 5 3 HELIX 3 3 GLY A 253 THR A 259 5 7 HELIX 4 4 ALA A 266 SER A 273 5 8 HELIX 5 5 ASP A 318 ALA A 322 5 5 HELIX 6 6 ASP A 323 ALA A 328 1 6 HELIX 7 7 GLN A 409 SER A 437 1 29 HELIX 8 8 PRO A 448 PHE A 463 1 16 HELIX 9 9 GLU A 471 GLU A 492 1 22 HELIX 10 10 GLY A 493 HIS A 506 1 14 HELIX 11 11 SER A 510 GLY A 519 1 10 HELIX 12 12 GLY A 519 ARG A 542 1 24 SHEET 1 A 9 PHE A 48 SER A 51 0 SHEET 2 A 9 GLU A 31 ALA A 38 -1 N ALA A 38 O PHE A 48 SHEET 3 A 9 ASP A 18 ILE A 28 -1 N CYS A 24 O LEU A 35 SHEET 4 A 9 TRP A 212 SER A 219 -1 O SER A 213 N GLN A 23 SHEET 5 A 9 ASP A 180 SER A 185 -1 N LEU A 181 O TRP A 212 SHEET 6 A 9 TRP A 159 PRO A 164 -1 N THR A 161 O VAL A 184 SHEET 7 A 9 ALA A 118 HIS A 123 -1 N ILE A 119 O TRP A 160 SHEET 8 A 9 PHE A 67 LEU A 73 -1 N VAL A 68 O ARG A 122 SHEET 9 A 9 ASP A 18 ILE A 28 -1 N VAL A 20 O PHE A 67 SHEET 1 B 4 TYR A 129 CYS A 132 0 SHEET 2 B 4 PHE A 145 GLN A 150 -1 O GLY A 148 N CYS A 131 SHEET 3 B 4 SER A 200 ALA A 206 -1 O ALA A 205 N PHE A 145 SHEET 4 B 4 TYR A 191 GLY A 197 -1 N TYR A 191 O ALA A 206 SHEET 1 C13 VAL A 233 HIS A 238 0 SHEET 2 C13 TRP A 275 THR A 279 -1 O TRP A 275 N LEU A 234 SHEET 3 C13 PRO A 294 HIS A 299 -1 O ARG A 298 N ARG A 276 SHEET 4 C13 PHE A 329 ARG A 332 -1 O PHE A 329 N PHE A 295 SHEET 5 C13 ILE A 360 HIS A 365 -1 O TYR A 362 N ARG A 332 SHEET 6 C13 VAL A 233 HIS A 238 0 SHEET 7 C13 GLU A 243 THR A 246 -1 O GLU A 243 N HIS A 238 SHEET 8 C13 HIS A 261 GLY A 264 -1 O HIS A 261 N THR A 246 SHEET 9 C13 ARG A 389 HIS A 394 -1 O ARG A 389 N TYR A 262 SHEET 10 C13 TRP A 371 TYR A 374 -1 N THR A 373 O ILE A 392 SHEET 11 C13 ILE A 360 HIS A 365 -1 N ILE A 363 O LEU A 372 SHEET 12 C13 LEU A 403 ARG A 407 -1 O LEU A 403 N CYS A 361 SHEET 13 C13 ILE A 360 HIS A 365 -1 N CYS A 361 O LEU A 403 SHEET 1 D 2 TYR A 305 LEU A 308 0 SHEET 2 D 2 LEU A 314 MET A 317 -1 O MET A 317 N TYR A 305 SITE 1 AC1 4 PHE A 42 ARG A 414 ASP A 458 HOH A 761 CRYST1 78.050 78.050 248.100 90.00 90.00 90.00 P 42 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012812 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012812 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004031 0.00000