data_4L5E # _entry.id 4L5E # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4L5E pdb_00004l5e 10.2210/pdb4l5e/pdb RCSB RCSB080202 ? ? WWPDB D_1000080202 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-08-28 2 'Structure model' 1 1 2013-10-23 3 'Structure model' 1 2 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' struct_ref_seq_dif 5 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4L5E _pdbx_database_status.recvd_initial_deposition_date 2013-06-10 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4L4U . unspecified PDB 2M8G . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Young, A.' 1 'Maris, A.E.' 2 'Vidangos, N.K.' 3 'Hong, E.' 4 'Pelton, J.G.' 5 'Batchelor, J.D.' 6 'Wemmer, D.E.' 7 # _citation.id primary _citation.title 'Structure, function, and tethering of DNA-binding domains in sigma (54) transcriptional activators.' _citation.journal_abbrev Biopolymers _citation.journal_volume 99 _citation.page_first 1082 _citation.page_last 1096 _citation.year 2013 _citation.journal_id_ASTM BIPMAA _citation.country US _citation.journal_id_ISSN 0006-3525 _citation.journal_id_CSD 0161 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23818155 _citation.pdbx_database_id_DOI 10.1002/bip.22333 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Vidangos, N.' 1 ? primary 'Maris, A.E.' 2 ? primary 'Young, A.' 3 ? primary 'Hong, E.' 4 ? primary 'Pelton, J.G.' 5 ? primary 'Batchelor, J.D.' 6 ? primary 'Wemmer, D.E.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Transcriptional regulator (NtrC family)' 5465.559 1 ? ? 'unp residues 393-438' ? 2 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 3 water nat water 18.015 82 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code HKSIKEIEKEEIIKVLKEVNFNKKLASEILGIPLRTLYKRLKEYGI _entity_poly.pdbx_seq_one_letter_code_can HKSIKEIEKEEIIKVLKEVNFNKKLASEILGIPLRTLYKRLKEYGI _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 LYS n 1 3 SER n 1 4 ILE n 1 5 LYS n 1 6 GLU n 1 7 ILE n 1 8 GLU n 1 9 LYS n 1 10 GLU n 1 11 GLU n 1 12 ILE n 1 13 ILE n 1 14 LYS n 1 15 VAL n 1 16 LEU n 1 17 LYS n 1 18 GLU n 1 19 VAL n 1 20 ASN n 1 21 PHE n 1 22 ASN n 1 23 LYS n 1 24 LYS n 1 25 LEU n 1 26 ALA n 1 27 SER n 1 28 GLU n 1 29 ILE n 1 30 LEU n 1 31 GLY n 1 32 ILE n 1 33 PRO n 1 34 LEU n 1 35 ARG n 1 36 THR n 1 37 LEU n 1 38 TYR n 1 39 LYS n 1 40 ARG n 1 41 LEU n 1 42 LYS n 1 43 GLU n 1 44 TYR n 1 45 GLY n 1 46 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ntrC1, aq_1117' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain VF5 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Aquifex aeolicus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 224324 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 393 393 HIS HIS A . n A 1 2 LYS 2 394 394 LYS LYS A . n A 1 3 SER 3 395 395 SER SER A . n A 1 4 ILE 4 396 396 ILE ILE A . n A 1 5 LYS 5 397 397 LYS LYS A . n A 1 6 GLU 6 398 398 GLU GLU A . n A 1 7 ILE 7 399 399 ILE ILE A . n A 1 8 GLU 8 400 400 GLU GLU A . n A 1 9 LYS 9 401 401 LYS LYS A . n A 1 10 GLU 10 402 402 GLU GLU A . n A 1 11 GLU 11 403 403 GLU GLU A . n A 1 12 ILE 12 404 404 ILE ILE A . n A 1 13 ILE 13 405 405 ILE ILE A . n A 1 14 LYS 14 406 406 LYS LYS A . n A 1 15 VAL 15 407 407 VAL VAL A . n A 1 16 LEU 16 408 408 LEU LEU A . n A 1 17 LYS 17 409 409 LYS LYS A . n A 1 18 GLU 18 410 410 GLU GLU A . n A 1 19 VAL 19 411 411 VAL VAL A . n A 1 20 ASN 20 412 412 ASN ASN A . n A 1 21 PHE 21 413 413 PHE PHE A . n A 1 22 ASN 22 414 414 ASN ASN A . n A 1 23 LYS 23 415 415 LYS LYS A . n A 1 24 LYS 24 416 416 LYS LYS A . n A 1 25 LEU 25 417 417 LEU LEU A . n A 1 26 ALA 26 418 418 ALA ALA A . n A 1 27 SER 27 419 419 SER SER A . n A 1 28 GLU 28 420 420 GLU GLU A . n A 1 29 ILE 29 421 421 ILE ILE A . n A 1 30 LEU 30 422 422 LEU LEU A . n A 1 31 GLY 31 423 423 GLY GLY A . n A 1 32 ILE 32 424 424 ILE ILE A . n A 1 33 PRO 33 425 425 PRO PRO A . n A 1 34 LEU 34 426 426 LEU LEU A . n A 1 35 ARG 35 427 427 ARG ARG A . n A 1 36 THR 36 428 428 THR THR A . n A 1 37 LEU 37 429 429 LEU LEU A . n A 1 38 TYR 38 430 430 TYR TYR A . n A 1 39 LYS 39 431 431 LYS LYS A . n A 1 40 ARG 40 432 432 ARG ARG A . n A 1 41 LEU 41 433 433 LEU LEU A . n A 1 42 LYS 42 434 434 LYS LYS A . n A 1 43 GLU 43 435 435 GLU GLU A . n A 1 44 TYR 44 436 436 TYR TYR A . n A 1 45 GLY 45 437 437 GLY GLY A . n A 1 46 ILE 46 438 438 ILE ILE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 501 401 SO4 SO4 A . C 2 SO4 1 502 402 SO4 SO4 A . D 3 HOH 1 601 1 HOH HOH A . D 3 HOH 2 602 2 HOH HOH A . D 3 HOH 3 603 3 HOH HOH A . D 3 HOH 4 604 4 HOH HOH A . D 3 HOH 5 605 5 HOH HOH A . D 3 HOH 6 606 6 HOH HOH A . D 3 HOH 7 607 7 HOH HOH A . D 3 HOH 8 608 8 HOH HOH A . D 3 HOH 9 609 9 HOH HOH A . D 3 HOH 10 610 10 HOH HOH A . D 3 HOH 11 611 11 HOH HOH A . D 3 HOH 12 612 12 HOH HOH A . D 3 HOH 13 613 13 HOH HOH A . D 3 HOH 14 614 14 HOH HOH A . D 3 HOH 15 615 15 HOH HOH A . D 3 HOH 16 616 16 HOH HOH A . D 3 HOH 17 617 17 HOH HOH A . D 3 HOH 18 618 18 HOH HOH A . D 3 HOH 19 619 19 HOH HOH A . D 3 HOH 20 620 20 HOH HOH A . D 3 HOH 21 621 21 HOH HOH A . D 3 HOH 22 622 22 HOH HOH A . D 3 HOH 23 623 23 HOH HOH A . D 3 HOH 24 624 24 HOH HOH A . D 3 HOH 25 625 25 HOH HOH A . D 3 HOH 26 626 26 HOH HOH A . D 3 HOH 27 627 27 HOH HOH A . D 3 HOH 28 628 28 HOH HOH A . D 3 HOH 29 629 29 HOH HOH A . D 3 HOH 30 630 30 HOH HOH A . D 3 HOH 31 631 31 HOH HOH A . D 3 HOH 32 632 32 HOH HOH A . D 3 HOH 33 633 33 HOH HOH A . D 3 HOH 34 634 34 HOH HOH A . D 3 HOH 35 635 35 HOH HOH A . D 3 HOH 36 636 36 HOH HOH A . D 3 HOH 37 637 37 HOH HOH A . D 3 HOH 38 638 38 HOH HOH A . D 3 HOH 39 639 39 HOH HOH A . D 3 HOH 40 640 40 HOH HOH A . D 3 HOH 41 641 41 HOH HOH A . D 3 HOH 42 642 42 HOH HOH A . D 3 HOH 43 643 43 HOH HOH A . D 3 HOH 44 644 44 HOH HOH A . D 3 HOH 45 645 45 HOH HOH A . D 3 HOH 46 646 46 HOH HOH A . D 3 HOH 47 647 47 HOH HOH A . D 3 HOH 48 648 48 HOH HOH A . D 3 HOH 49 649 49 HOH HOH A . D 3 HOH 50 650 50 HOH HOH A . D 3 HOH 51 651 51 HOH HOH A . D 3 HOH 52 652 52 HOH HOH A . D 3 HOH 53 653 53 HOH HOH A . D 3 HOH 54 654 54 HOH HOH A . D 3 HOH 55 655 55 HOH HOH A . D 3 HOH 56 656 56 HOH HOH A . D 3 HOH 57 657 57 HOH HOH A . D 3 HOH 58 658 58 HOH HOH A . D 3 HOH 59 659 59 HOH HOH A . D 3 HOH 60 660 60 HOH HOH A . D 3 HOH 61 661 61 HOH HOH A . D 3 HOH 62 662 62 HOH HOH A . D 3 HOH 63 663 63 HOH HOH A . D 3 HOH 64 664 64 HOH HOH A . D 3 HOH 65 665 65 HOH HOH A . D 3 HOH 66 666 66 HOH HOH A . D 3 HOH 67 667 67 HOH HOH A . D 3 HOH 68 668 68 HOH HOH A . D 3 HOH 69 669 69 HOH HOH A . D 3 HOH 70 670 70 HOH HOH A . D 3 HOH 71 671 71 HOH HOH A . D 3 HOH 72 672 72 HOH HOH A . D 3 HOH 73 673 74 HOH HOH A . D 3 HOH 74 674 75 HOH HOH A . D 3 HOH 75 675 76 HOH HOH A . D 3 HOH 76 676 77 HOH HOH A . D 3 HOH 77 677 78 HOH HOH A . D 3 HOH 78 678 81 HOH HOH A . D 3 HOH 79 679 82 HOH HOH A . D 3 HOH 80 680 83 HOH HOH A . D 3 HOH 81 681 84 HOH HOH A . D 3 HOH 82 682 85 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A LYS 409 ? NZ ? A LYS 17 NZ 2 1 Y 0 A LYS 434 ? NZ ? A LYS 42 NZ # _software.name PHENIX _software.classification refinement _software.version '(phenix.refine: 1.7.3_928)' _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 4L5E _cell.length_a 33.378 _cell.length_b 62.268 _cell.length_c 54.513 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4L5E _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4L5E _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.59 _exptl_crystal.density_percent_sol 52.53 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.3.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.3.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 4L5E _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 27 _reflns.d_resolution_high 1.34 _reflns.number_obs 13005 _reflns.number_all 13122 _reflns.percent_possible_obs 99.11 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 4L5E _refine.ls_number_reflns_obs 13005 _refine.ls_number_reflns_all 13122 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27 _refine.ls_d_res_high 1.340 _refine.ls_percent_reflns_obs 99.11 _refine.ls_R_factor_obs 0.1764 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1730 _refine.ls_R_factor_R_free 0.2064 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.03 _refine.ls_number_reflns_R_free 1304 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -0.1167 _refine.aniso_B[2][2] -2.0668 _refine.aniso_B[3][3] 2.1907 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.439 _refine.solvent_model_param_bsol 65.410 _refine.pdbx_solvent_vdw_probe_radii 0.80 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.47 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values MLHL _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.23 _refine.pdbx_overall_phase_error 18.10 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 385 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 82 _refine_hist.number_atoms_total 477 _refine_hist.d_res_high 1.340 _refine_hist.d_res_low 27 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.005 ? ? 424 ? 'X-RAY DIFFRACTION' f_angle_d 0.865 ? ? 568 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 10.831 ? ? 174 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.060 ? ? 64 ? 'X-RAY DIFFRACTION' f_plane_restr 0.003 ? ? 67 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.3400 1.3937 1197 0.4169 93.00 0.4350 . . 143 . . . . 'X-RAY DIFFRACTION' . 1.3937 1.4571 1280 0.2963 100.00 0.3131 . . 143 . . . . 'X-RAY DIFFRACTION' . 1.4571 1.5339 1297 0.1924 100.00 0.2347 . . 140 . . . . 'X-RAY DIFFRACTION' . 1.5339 1.6300 1292 0.1561 100.00 0.2003 . . 142 . . . . 'X-RAY DIFFRACTION' . 1.6300 1.7558 1304 0.1551 100.00 0.1787 . . 155 . . . . 'X-RAY DIFFRACTION' . 1.7558 1.9325 1289 0.1456 100.00 0.1857 . . 141 . . . . 'X-RAY DIFFRACTION' . 1.9325 2.2120 1326 0.1344 100.00 0.1813 . . 145 . . . . 'X-RAY DIFFRACTION' . 2.2120 2.7864 1332 0.1440 100.00 0.1888 . . 147 . . . . 'X-RAY DIFFRACTION' . 2.7864 27.0409 1384 0.1856 99.00 0.2054 . . 148 . . . . 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4L5E _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4L5E _struct.title 'Crystal structure of A. aeolicus NtrC1 DNA binding domain' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4L5E _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text 'Helix-turn-helix DNA binding domain, DNA binding, PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code O67198_AQUAE _struct_ref.pdbx_db_accession O67198 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code HKSIKEIEKEEIIKVLKEVNFNKKLASEILGIPLRTLYRRLKEYGI _struct_ref.pdbx_align_begin 393 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4L5E _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 46 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O67198 _struct_ref_seq.db_align_beg 393 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 438 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 393 _struct_ref_seq.pdbx_auth_seq_align_end 438 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4L5E _struct_ref_seq_dif.mon_id LYS _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 39 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code O67198 _struct_ref_seq_dif.db_mon_id ARG _struct_ref_seq_dif.pdbx_seq_db_seq_num 431 _struct_ref_seq_dif.details conflict _struct_ref_seq_dif.pdbx_auth_seq_num 431 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1320 ? 1 MORE -65 ? 1 'SSA (A^2)' 6570 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_555 x,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 3 ? VAL A 19 ? SER A 395 VAL A 411 1 ? 17 HELX_P HELX_P2 2 ASN A 22 ? GLY A 31 ? ASN A 414 GLY A 423 1 ? 10 HELX_P HELX_P3 3 PRO A 33 ? GLY A 45 ? PRO A 425 GLY A 437 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 501 ? 7 'BINDING SITE FOR RESIDUE SO4 A 501' AC2 Software A SO4 502 ? 6 'BINDING SITE FOR RESIDUE SO4 A 502' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 THR A 36 ? THR A 428 . ? 1_555 ? 2 AC1 7 LYS A 39 ? LYS A 431 . ? 1_555 ? 3 AC1 7 ARG A 40 ? ARG A 432 . ? 1_555 ? 4 AC1 7 HOH D . ? HOH A 614 . ? 1_555 ? 5 AC1 7 HOH D . ? HOH A 644 . ? 1_555 ? 6 AC1 7 HOH D . ? HOH A 676 . ? 3_554 ? 7 AC1 7 HOH D . ? HOH A 676 . ? 1_555 ? 8 AC2 6 LEU A 34 ? LEU A 426 . ? 1_555 ? 9 AC2 6 LEU A 34 ? LEU A 426 . ? 4_555 ? 10 AC2 6 ARG A 35 ? ARG A 427 . ? 4_555 ? 11 AC2 6 ARG A 35 ? ARG A 427 . ? 1_555 ? 12 AC2 6 HOH D . ? HOH A 669 . ? 1_555 ? 13 AC2 6 HOH D . ? HOH A 669 . ? 4_555 ? # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A SO4 502 ? C SO4 . 2 1 A HOH 676 ? D HOH . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 GLU N N N N 58 GLU CA C N S 59 GLU C C N N 60 GLU O O N N 61 GLU CB C N N 62 GLU CG C N N 63 GLU CD C N N 64 GLU OE1 O N N 65 GLU OE2 O N N 66 GLU OXT O N N 67 GLU H H N N 68 GLU H2 H N N 69 GLU HA H N N 70 GLU HB2 H N N 71 GLU HB3 H N N 72 GLU HG2 H N N 73 GLU HG3 H N N 74 GLU HE2 H N N 75 GLU HXT H N N 76 GLY N N N N 77 GLY CA C N N 78 GLY C C N N 79 GLY O O N N 80 GLY OXT O N N 81 GLY H H N N 82 GLY H2 H N N 83 GLY HA2 H N N 84 GLY HA3 H N N 85 GLY HXT H N N 86 HIS N N N N 87 HIS CA C N S 88 HIS C C N N 89 HIS O O N N 90 HIS CB C N N 91 HIS CG C Y N 92 HIS ND1 N Y N 93 HIS CD2 C Y N 94 HIS CE1 C Y N 95 HIS NE2 N Y N 96 HIS OXT O N N 97 HIS H H N N 98 HIS H2 H N N 99 HIS HA H N N 100 HIS HB2 H N N 101 HIS HB3 H N N 102 HIS HD1 H N N 103 HIS HD2 H N N 104 HIS HE1 H N N 105 HIS HE2 H N N 106 HIS HXT H N N 107 HOH O O N N 108 HOH H1 H N N 109 HOH H2 H N N 110 ILE N N N N 111 ILE CA C N S 112 ILE C C N N 113 ILE O O N N 114 ILE CB C N S 115 ILE CG1 C N N 116 ILE CG2 C N N 117 ILE CD1 C N N 118 ILE OXT O N N 119 ILE H H N N 120 ILE H2 H N N 121 ILE HA H N N 122 ILE HB H N N 123 ILE HG12 H N N 124 ILE HG13 H N N 125 ILE HG21 H N N 126 ILE HG22 H N N 127 ILE HG23 H N N 128 ILE HD11 H N N 129 ILE HD12 H N N 130 ILE HD13 H N N 131 ILE HXT H N N 132 LEU N N N N 133 LEU CA C N S 134 LEU C C N N 135 LEU O O N N 136 LEU CB C N N 137 LEU CG C N N 138 LEU CD1 C N N 139 LEU CD2 C N N 140 LEU OXT O N N 141 LEU H H N N 142 LEU H2 H N N 143 LEU HA H N N 144 LEU HB2 H N N 145 LEU HB3 H N N 146 LEU HG H N N 147 LEU HD11 H N N 148 LEU HD12 H N N 149 LEU HD13 H N N 150 LEU HD21 H N N 151 LEU HD22 H N N 152 LEU HD23 H N N 153 LEU HXT H N N 154 LYS N N N N 155 LYS CA C N S 156 LYS C C N N 157 LYS O O N N 158 LYS CB C N N 159 LYS CG C N N 160 LYS CD C N N 161 LYS CE C N N 162 LYS NZ N N N 163 LYS OXT O N N 164 LYS H H N N 165 LYS H2 H N N 166 LYS HA H N N 167 LYS HB2 H N N 168 LYS HB3 H N N 169 LYS HG2 H N N 170 LYS HG3 H N N 171 LYS HD2 H N N 172 LYS HD3 H N N 173 LYS HE2 H N N 174 LYS HE3 H N N 175 LYS HZ1 H N N 176 LYS HZ2 H N N 177 LYS HZ3 H N N 178 LYS HXT H N N 179 PHE N N N N 180 PHE CA C N S 181 PHE C C N N 182 PHE O O N N 183 PHE CB C N N 184 PHE CG C Y N 185 PHE CD1 C Y N 186 PHE CD2 C Y N 187 PHE CE1 C Y N 188 PHE CE2 C Y N 189 PHE CZ C Y N 190 PHE OXT O N N 191 PHE H H N N 192 PHE H2 H N N 193 PHE HA H N N 194 PHE HB2 H N N 195 PHE HB3 H N N 196 PHE HD1 H N N 197 PHE HD2 H N N 198 PHE HE1 H N N 199 PHE HE2 H N N 200 PHE HZ H N N 201 PHE HXT H N N 202 PRO N N N N 203 PRO CA C N S 204 PRO C C N N 205 PRO O O N N 206 PRO CB C N N 207 PRO CG C N N 208 PRO CD C N N 209 PRO OXT O N N 210 PRO H H N N 211 PRO HA H N N 212 PRO HB2 H N N 213 PRO HB3 H N N 214 PRO HG2 H N N 215 PRO HG3 H N N 216 PRO HD2 H N N 217 PRO HD3 H N N 218 PRO HXT H N N 219 SER N N N N 220 SER CA C N S 221 SER C C N N 222 SER O O N N 223 SER CB C N N 224 SER OG O N N 225 SER OXT O N N 226 SER H H N N 227 SER H2 H N N 228 SER HA H N N 229 SER HB2 H N N 230 SER HB3 H N N 231 SER HG H N N 232 SER HXT H N N 233 SO4 S S N N 234 SO4 O1 O N N 235 SO4 O2 O N N 236 SO4 O3 O N N 237 SO4 O4 O N N 238 THR N N N N 239 THR CA C N S 240 THR C C N N 241 THR O O N N 242 THR CB C N R 243 THR OG1 O N N 244 THR CG2 C N N 245 THR OXT O N N 246 THR H H N N 247 THR H2 H N N 248 THR HA H N N 249 THR HB H N N 250 THR HG1 H N N 251 THR HG21 H N N 252 THR HG22 H N N 253 THR HG23 H N N 254 THR HXT H N N 255 TYR N N N N 256 TYR CA C N S 257 TYR C C N N 258 TYR O O N N 259 TYR CB C N N 260 TYR CG C Y N 261 TYR CD1 C Y N 262 TYR CD2 C Y N 263 TYR CE1 C Y N 264 TYR CE2 C Y N 265 TYR CZ C Y N 266 TYR OH O N N 267 TYR OXT O N N 268 TYR H H N N 269 TYR H2 H N N 270 TYR HA H N N 271 TYR HB2 H N N 272 TYR HB3 H N N 273 TYR HD1 H N N 274 TYR HD2 H N N 275 TYR HE1 H N N 276 TYR HE2 H N N 277 TYR HH H N N 278 TYR HXT H N N 279 VAL N N N N 280 VAL CA C N S 281 VAL C C N N 282 VAL O O N N 283 VAL CB C N N 284 VAL CG1 C N N 285 VAL CG2 C N N 286 VAL OXT O N N 287 VAL H H N N 288 VAL H2 H N N 289 VAL HA H N N 290 VAL HB H N N 291 VAL HG11 H N N 292 VAL HG12 H N N 293 VAL HG13 H N N 294 VAL HG21 H N N 295 VAL HG22 H N N 296 VAL HG23 H N N 297 VAL HXT H N N 298 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 GLU N CA sing N N 55 GLU N H sing N N 56 GLU N H2 sing N N 57 GLU CA C sing N N 58 GLU CA CB sing N N 59 GLU CA HA sing N N 60 GLU C O doub N N 61 GLU C OXT sing N N 62 GLU CB CG sing N N 63 GLU CB HB2 sing N N 64 GLU CB HB3 sing N N 65 GLU CG CD sing N N 66 GLU CG HG2 sing N N 67 GLU CG HG3 sing N N 68 GLU CD OE1 doub N N 69 GLU CD OE2 sing N N 70 GLU OE2 HE2 sing N N 71 GLU OXT HXT sing N N 72 GLY N CA sing N N 73 GLY N H sing N N 74 GLY N H2 sing N N 75 GLY CA C sing N N 76 GLY CA HA2 sing N N 77 GLY CA HA3 sing N N 78 GLY C O doub N N 79 GLY C OXT sing N N 80 GLY OXT HXT sing N N 81 HIS N CA sing N N 82 HIS N H sing N N 83 HIS N H2 sing N N 84 HIS CA C sing N N 85 HIS CA CB sing N N 86 HIS CA HA sing N N 87 HIS C O doub N N 88 HIS C OXT sing N N 89 HIS CB CG sing N N 90 HIS CB HB2 sing N N 91 HIS CB HB3 sing N N 92 HIS CG ND1 sing Y N 93 HIS CG CD2 doub Y N 94 HIS ND1 CE1 doub Y N 95 HIS ND1 HD1 sing N N 96 HIS CD2 NE2 sing Y N 97 HIS CD2 HD2 sing N N 98 HIS CE1 NE2 sing Y N 99 HIS CE1 HE1 sing N N 100 HIS NE2 HE2 sing N N 101 HIS OXT HXT sing N N 102 HOH O H1 sing N N 103 HOH O H2 sing N N 104 ILE N CA sing N N 105 ILE N H sing N N 106 ILE N H2 sing N N 107 ILE CA C sing N N 108 ILE CA CB sing N N 109 ILE CA HA sing N N 110 ILE C O doub N N 111 ILE C OXT sing N N 112 ILE CB CG1 sing N N 113 ILE CB CG2 sing N N 114 ILE CB HB sing N N 115 ILE CG1 CD1 sing N N 116 ILE CG1 HG12 sing N N 117 ILE CG1 HG13 sing N N 118 ILE CG2 HG21 sing N N 119 ILE CG2 HG22 sing N N 120 ILE CG2 HG23 sing N N 121 ILE CD1 HD11 sing N N 122 ILE CD1 HD12 sing N N 123 ILE CD1 HD13 sing N N 124 ILE OXT HXT sing N N 125 LEU N CA sing N N 126 LEU N H sing N N 127 LEU N H2 sing N N 128 LEU CA C sing N N 129 LEU CA CB sing N N 130 LEU CA HA sing N N 131 LEU C O doub N N 132 LEU C OXT sing N N 133 LEU CB CG sing N N 134 LEU CB HB2 sing N N 135 LEU CB HB3 sing N N 136 LEU CG CD1 sing N N 137 LEU CG CD2 sing N N 138 LEU CG HG sing N N 139 LEU CD1 HD11 sing N N 140 LEU CD1 HD12 sing N N 141 LEU CD1 HD13 sing N N 142 LEU CD2 HD21 sing N N 143 LEU CD2 HD22 sing N N 144 LEU CD2 HD23 sing N N 145 LEU OXT HXT sing N N 146 LYS N CA sing N N 147 LYS N H sing N N 148 LYS N H2 sing N N 149 LYS CA C sing N N 150 LYS CA CB sing N N 151 LYS CA HA sing N N 152 LYS C O doub N N 153 LYS C OXT sing N N 154 LYS CB CG sing N N 155 LYS CB HB2 sing N N 156 LYS CB HB3 sing N N 157 LYS CG CD sing N N 158 LYS CG HG2 sing N N 159 LYS CG HG3 sing N N 160 LYS CD CE sing N N 161 LYS CD HD2 sing N N 162 LYS CD HD3 sing N N 163 LYS CE NZ sing N N 164 LYS CE HE2 sing N N 165 LYS CE HE3 sing N N 166 LYS NZ HZ1 sing N N 167 LYS NZ HZ2 sing N N 168 LYS NZ HZ3 sing N N 169 LYS OXT HXT sing N N 170 PHE N CA sing N N 171 PHE N H sing N N 172 PHE N H2 sing N N 173 PHE CA C sing N N 174 PHE CA CB sing N N 175 PHE CA HA sing N N 176 PHE C O doub N N 177 PHE C OXT sing N N 178 PHE CB CG sing N N 179 PHE CB HB2 sing N N 180 PHE CB HB3 sing N N 181 PHE CG CD1 doub Y N 182 PHE CG CD2 sing Y N 183 PHE CD1 CE1 sing Y N 184 PHE CD1 HD1 sing N N 185 PHE CD2 CE2 doub Y N 186 PHE CD2 HD2 sing N N 187 PHE CE1 CZ doub Y N 188 PHE CE1 HE1 sing N N 189 PHE CE2 CZ sing Y N 190 PHE CE2 HE2 sing N N 191 PHE CZ HZ sing N N 192 PHE OXT HXT sing N N 193 PRO N CA sing N N 194 PRO N CD sing N N 195 PRO N H sing N N 196 PRO CA C sing N N 197 PRO CA CB sing N N 198 PRO CA HA sing N N 199 PRO C O doub N N 200 PRO C OXT sing N N 201 PRO CB CG sing N N 202 PRO CB HB2 sing N N 203 PRO CB HB3 sing N N 204 PRO CG CD sing N N 205 PRO CG HG2 sing N N 206 PRO CG HG3 sing N N 207 PRO CD HD2 sing N N 208 PRO CD HD3 sing N N 209 PRO OXT HXT sing N N 210 SER N CA sing N N 211 SER N H sing N N 212 SER N H2 sing N N 213 SER CA C sing N N 214 SER CA CB sing N N 215 SER CA HA sing N N 216 SER C O doub N N 217 SER C OXT sing N N 218 SER CB OG sing N N 219 SER CB HB2 sing N N 220 SER CB HB3 sing N N 221 SER OG HG sing N N 222 SER OXT HXT sing N N 223 SO4 S O1 doub N N 224 SO4 S O2 doub N N 225 SO4 S O3 sing N N 226 SO4 S O4 sing N N 227 THR N CA sing N N 228 THR N H sing N N 229 THR N H2 sing N N 230 THR CA C sing N N 231 THR CA CB sing N N 232 THR CA HA sing N N 233 THR C O doub N N 234 THR C OXT sing N N 235 THR CB OG1 sing N N 236 THR CB CG2 sing N N 237 THR CB HB sing N N 238 THR OG1 HG1 sing N N 239 THR CG2 HG21 sing N N 240 THR CG2 HG22 sing N N 241 THR CG2 HG23 sing N N 242 THR OXT HXT sing N N 243 TYR N CA sing N N 244 TYR N H sing N N 245 TYR N H2 sing N N 246 TYR CA C sing N N 247 TYR CA CB sing N N 248 TYR CA HA sing N N 249 TYR C O doub N N 250 TYR C OXT sing N N 251 TYR CB CG sing N N 252 TYR CB HB2 sing N N 253 TYR CB HB3 sing N N 254 TYR CG CD1 doub Y N 255 TYR CG CD2 sing Y N 256 TYR CD1 CE1 sing Y N 257 TYR CD1 HD1 sing N N 258 TYR CD2 CE2 doub Y N 259 TYR CD2 HD2 sing N N 260 TYR CE1 CZ doub Y N 261 TYR CE1 HE1 sing N N 262 TYR CE2 CZ sing Y N 263 TYR CE2 HE2 sing N N 264 TYR CZ OH sing N N 265 TYR OH HH sing N N 266 TYR OXT HXT sing N N 267 VAL N CA sing N N 268 VAL N H sing N N 269 VAL N H2 sing N N 270 VAL CA C sing N N 271 VAL CA CB sing N N 272 VAL CA HA sing N N 273 VAL C O doub N N 274 VAL C OXT sing N N 275 VAL CB CG1 sing N N 276 VAL CB CG2 sing N N 277 VAL CB HB sing N N 278 VAL CG1 HG11 sing N N 279 VAL CG1 HG12 sing N N 280 VAL CG1 HG13 sing N N 281 VAL CG2 HG21 sing N N 282 VAL CG2 HG22 sing N N 283 VAL CG2 HG23 sing N N 284 VAL OXT HXT sing N N 285 # _atom_sites.entry_id 4L5E _atom_sites.fract_transf_matrix[1][1] 0.029960 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016060 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018344 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_