HEADER STRUCTURAL PROTEIN 13-JUN-13 4L6Y TITLE STRUCTURE OF THE MICROTUBULE ASSOCIATED PROTEIN PRC1 (PROTEIN TITLE 2 REGULATOR OF CYTOKINESIS 1) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN REGULATOR OF CYTOKINESIS 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 1-486; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PRC1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-ROSETTA; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PET-DUET1 KEYWDS SPECTRIN, MICROTUBULE BINDING; MICROTUBULE CROSSLINKING, MICROTUBULE; KEYWDS 2 KINESIN-4, SPINDLE MIDZONE, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.SUBRAMANIAN,S.TI,L.TAN,S.A.DARST,T.M.KAPOOR REVDAT 4 20-SEP-23 4L6Y 1 SEQADV REVDAT 3 15-NOV-17 4L6Y 1 REMARK REVDAT 2 07-AUG-13 4L6Y 1 JRNL REVDAT 1 17-JUL-13 4L6Y 0 JRNL AUTH R.SUBRAMANIAN,S.C.TI,L.TAN,S.A.DARST,T.M.KAPOOR JRNL TITL MARKING AND MEASURING SINGLE MICROTUBULES BY PRC1 AND JRNL TITL 2 KINESIN-4. JRNL REF CELL(CAMBRIDGE,MASS.) V. 154 377 2013 JRNL REFN ISSN 0092-8674 JRNL PMID 23870126 JRNL DOI 10.1016/J.CELL.2013.06.021 REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.5 REMARK 3 NUMBER OF REFLECTIONS : 37064 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.276 REMARK 3 R VALUE (WORKING SET) : 0.275 REMARK 3 FREE R VALUE : 0.306 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.400 REMARK 3 FREE R VALUE TEST SET COUNT : 2001 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.2081 - 7.7187 0.82 2624 141 0.1837 0.2077 REMARK 3 2 7.7187 - 6.1453 0.85 2674 146 0.3172 0.2991 REMARK 3 3 6.1453 - 5.3740 0.86 2712 137 0.3831 0.4031 REMARK 3 4 5.3740 - 4.8851 0.87 2726 140 0.2733 0.3175 REMARK 3 5 4.8851 - 4.5363 0.87 2738 143 0.2685 0.3222 REMARK 3 6 4.5363 - 4.2697 0.88 2773 148 0.2737 0.3552 REMARK 3 7 4.2697 - 4.0565 0.88 2719 139 0.2678 0.3005 REMARK 3 8 4.0565 - 3.8803 0.88 2817 147 0.2797 0.3053 REMARK 3 9 3.8803 - 3.7313 0.88 2766 141 0.2878 0.3002 REMARK 3 10 3.7313 - 3.6027 0.87 2733 143 0.2982 0.3473 REMARK 3 11 3.6027 - 3.4903 0.85 2697 139 0.3013 0.3699 REMARK 3 12 3.4903 - 3.3907 0.85 2621 144 0.3205 0.3073 REMARK 3 13 3.3907 - 3.3015 0.82 2569 141 0.3449 0.4330 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.460 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.5000 REMARK 3 OPERATOR: H,-K,-H-L REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 6637 REMARK 3 ANGLE : 0.632 9000 REMARK 3 CHIRALITY : 0.042 1063 REMARK 3 PLANARITY : 0.003 1174 REMARK 3 DIHEDRAL : 11.894 2370 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4L6Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-JUN-13. REMARK 100 THE DEPOSITION ID IS D_1000080258. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUL-11 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39522 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.400 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.31 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER (PHENIX) REMARK 200 STARTING MODEL: PDB ENTRY 4L3I REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 80.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 6.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CONCENTRATION: 5-10 MG/ML. PROTEIN REMARK 280 BUFFER: 80 MM PIPES (PH 6.8), 1 MM MGCL2, 1 MM EGTA, 150 MM KCL, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K, PH 8.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 104.90000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 55530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 ALA A -2 REMARK 465 ALA A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 ASP A 325 REMARK 465 PHE A 378 REMARK 465 THR A 379 REMARK 465 ASN A 380 REMARK 465 GLN A 451 REMARK 465 LEU A 452 REMARK 465 LYS A 453 REMARK 465 ASN A 454 REMARK 465 LYS A 455 REMARK 465 LYS A 456 REMARK 465 GLN A 457 REMARK 465 THR A 458 REMARK 465 GLU A 459 REMARK 465 THR A 460 REMARK 465 GLU A 461 REMARK 465 MET A 462 REMARK 465 LEU A 463 REMARK 465 TYR A 464 REMARK 465 GLY A 465 REMARK 465 SER A 466 REMARK 465 ALA A 467 REMARK 465 PRO A 468 REMARK 465 ARG A 469 REMARK 465 THR A 470 REMARK 465 PRO A 471 REMARK 465 SER A 472 REMARK 465 LYS A 473 REMARK 465 ARG A 474 REMARK 465 ARG A 475 REMARK 465 GLY A 476 REMARK 465 LEU A 477 REMARK 465 ALA A 478 REMARK 465 PRO A 479 REMARK 465 ASN A 480 REMARK 465 THR A 481 REMARK 465 PRO A 482 REMARK 465 GLY A 483 REMARK 465 LYS A 484 REMARK 465 ALA A 485 REMARK 465 ARG A 486 REMARK 465 GLY B -3 REMARK 465 ALA B -2 REMARK 465 ALA B -1 REMARK 465 ALA B 0 REMARK 465 MET B 1 REMARK 465 HIS B 139 REMARK 465 TYR B 140 REMARK 465 ASP B 141 REMARK 465 ILE B 142 REMARK 465 ASP B 143 REMARK 465 PHE B 309 REMARK 465 TYR B 310 REMARK 465 SER B 311 REMARK 465 GLN B 426 REMARK 465 LYS B 427 REMARK 465 PHE B 428 REMARK 465 ARG B 445 REMARK 465 ALA B 446 REMARK 465 LYS B 447 REMARK 465 GLN B 448 REMARK 465 GLU B 449 REMARK 465 ARG B 450 REMARK 465 GLN B 451 REMARK 465 LEU B 452 REMARK 465 LYS B 453 REMARK 465 ASN B 454 REMARK 465 LYS B 455 REMARK 465 LYS B 456 REMARK 465 GLN B 457 REMARK 465 THR B 458 REMARK 465 GLU B 459 REMARK 465 THR B 460 REMARK 465 GLU B 461 REMARK 465 MET B 462 REMARK 465 LEU B 463 REMARK 465 TYR B 464 REMARK 465 GLY B 465 REMARK 465 SER B 466 REMARK 465 ALA B 467 REMARK 465 PRO B 468 REMARK 465 ARG B 469 REMARK 465 THR B 470 REMARK 465 PRO B 471 REMARK 465 SER B 472 REMARK 465 LYS B 473 REMARK 465 ARG B 474 REMARK 465 ARG B 475 REMARK 465 GLY B 476 REMARK 465 LEU B 477 REMARK 465 ALA B 478 REMARK 465 PRO B 479 REMARK 465 ASN B 480 REMARK 465 THR B 481 REMARK 465 PRO B 482 REMARK 465 GLY B 483 REMARK 465 LYS B 484 REMARK 465 ALA B 485 REMARK 465 ARG B 486 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 2 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 3 CG CD NE CZ NH1 NH2 REMARK 470 SER A 4 OG REMARK 470 GLU A 5 CG CD OE1 OE2 REMARK 470 GLU A 10 CG CD OE1 OE2 REMARK 470 ARG A 23 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 27 CG CD OE1 OE2 REMARK 470 ARG A 36 CG CD NE CZ NH1 NH2 REMARK 470 THR A 40 OG1 CG2 REMARK 470 GLU A 41 CG CD OE1 OE2 REMARK 470 LYS A 45 CG CD CE NZ REMARK 470 LYS A 67 CG CD CE NZ REMARK 470 LYS A 74 CG CD CE NZ REMARK 470 GLU A 86 CG CD OE1 OE2 REMARK 470 GLU A 93 CG CD OE1 OE2 REMARK 470 LYS A 112 CG CD CE NZ REMARK 470 GLN A 113 CG CD OE1 NE2 REMARK 470 LYS A 122 CG CD CE NZ REMARK 470 GLN A 129 CG CD OE1 NE2 REMARK 470 HIS A 139 CG ND1 CD2 CE1 NE2 REMARK 470 ILE A 142 CG1 CG2 CD1 REMARK 470 GLN A 155 CG CD OE1 NE2 REMARK 470 PHE A 156 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 165 CG CD OE1 OE2 REMARK 470 ARG A 179 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 180 CG CD OE1 NE2 REMARK 470 ILE A 182 CG1 CG2 CD1 REMARK 470 ARG A 198 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 208 CG CD1 CD2 CE1 CE2 CZ REMARK 470 CYS A 209 SG REMARK 470 THR A 217 OG1 CG2 REMARK 470 GLN A 224 CG CD OE1 NE2 REMARK 470 GLU A 226 CG CD OE1 OE2 REMARK 470 ASP A 248 CG OD1 OD2 REMARK 470 GLN A 251 CG CD OE1 NE2 REMARK 470 GLU A 256 CG CD OE1 OE2 REMARK 470 ARG A 257 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 263 CG1 CG2 CD1 REMARK 470 SER A 265 OG REMARK 470 LYS A 270 CG CD CE NZ REMARK 470 LYS A 273 CG CD CE NZ REMARK 470 ASN A 289 CG OD1 ND2 REMARK 470 LYS A 291 CG CD CE NZ REMARK 470 LYS A 292 CG CD CE NZ REMARK 470 GLN A 303 CG CD OE1 NE2 REMARK 470 CYS A 308 SG REMARK 470 TYR A 310 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A 313 CG CD OE1 OE2 REMARK 470 GLN A 314 CG CD OE1 NE2 REMARK 470 CYS A 322 SG REMARK 470 VAL A 339 CG1 CG2 REMARK 470 VAL A 355 CG1 CG2 REMARK 470 GLU A 360 CG CD OE1 OE2 REMARK 470 LEU A 364 CG CD1 CD2 REMARK 470 ARG A 370 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 371 CG CD CE NZ REMARK 470 SER A 373 OG REMARK 470 ASP A 374 CG OD1 OD2 REMARK 470 ASN A 376 CG OD1 ND2 REMARK 470 ARG A 381 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 384 CG OD1 ND2 REMARK 470 LEU A 385 CG CD1 CD2 REMARK 470 LEU A 386 CG CD1 CD2 REMARK 470 LYS A 387 CG CD CE NZ REMARK 470 LYS A 394 CG CD CE NZ REMARK 470 LYS A 397 CG CD CE NZ REMARK 470 LYS A 401 CG CD CE NZ REMARK 470 GLU A 404 CG CD OE1 OE2 REMARK 470 LYS A 407 CG CD CE NZ REMARK 470 GLU A 411 CG CD OE1 OE2 REMARK 470 GLN A 415 CG CD OE1 NE2 REMARK 470 GLU A 416 CG CD OE1 OE2 REMARK 470 HIS A 417 CG ND1 CD2 CE1 NE2 REMARK 470 SER A 418 OG REMARK 470 LYS A 419 CG CD CE NZ REMARK 470 MET A 422 CG SD CE REMARK 470 VAL A 423 CG1 CG2 REMARK 470 ASN A 424 CG OD1 ND2 REMARK 470 GLN A 426 CG CD OE1 NE2 REMARK 470 LYS A 427 CG CD CE NZ REMARK 470 PHE A 428 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 430 CG CD OE1 OE2 REMARK 470 GLU A 434 CG CD OE1 OE2 REMARK 470 GLU A 437 CG CD OE1 OE2 REMARK 470 LEU A 441 CG CD1 CD2 REMARK 470 LYS A 443 CG CD CE NZ REMARK 470 GLU A 444 CG CD OE1 OE2 REMARK 470 ARG A 445 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 447 CG CD CE NZ REMARK 470 GLN A 448 CG CD OE1 NE2 REMARK 470 GLU A 449 CG CD OE1 OE2 REMARK 470 ARG A 450 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 2 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 3 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 5 CG CD OE1 OE2 REMARK 470 GLN B 16 CG CD OE1 NE2 REMARK 470 ARG B 23 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 44 CG CD CE NZ REMARK 470 LYS B 62 CG CD CE NZ REMARK 470 GLU B 63 CG CD OE1 OE2 REMARK 470 GLN B 89 CG CD OE1 NE2 REMARK 470 GLU B 90 CG CD OE1 OE2 REMARK 470 GLU B 93 CG CD OE1 OE2 REMARK 470 THR B 94 OG1 CG2 REMARK 470 LYS B 101 CG CD CE NZ REMARK 470 LYS B 112 CG CD CE NZ REMARK 470 LYS B 115 CG CD CE NZ REMARK 470 GLU B 116 CG CD OE1 OE2 REMARK 470 LYS B 118 CG CD CE NZ REMARK 470 GLN B 119 CG CD OE1 NE2 REMARK 470 LYS B 122 CG CD CE NZ REMARK 470 LEU B 123 CG CD1 CD2 REMARK 470 GLU B 126 CG CD OE1 OE2 REMARK 470 GLN B 127 CG CD OE1 NE2 REMARK 470 GLN B 129 CG CD OE1 NE2 REMARK 470 GLU B 130 CG CD OE1 OE2 REMARK 470 GLU B 133 CG CD OE1 OE2 REMARK 470 CYS B 136 SG REMARK 470 MET B 137 CG SD CE REMARK 470 SER B 144 OG REMARK 470 SER B 146 OG REMARK 470 VAL B 147 CG1 CG2 REMARK 470 GLU B 151 CG CD OE1 OE2 REMARK 470 GLN B 158 CG CD OE1 NE2 REMARK 470 GLU B 172 CG CD OE1 OE2 REMARK 470 PHE B 174 CG CD1 CD2 CE1 CE2 CZ REMARK 470 VAL B 175 CG1 CG2 REMARK 470 SER B 176 OG REMARK 470 LYS B 178 CG CD CE NZ REMARK 470 THR B 191 OG1 CG2 REMARK 470 ASP B 193 CG OD1 OD2 REMARK 470 THR B 194 OG1 CG2 REMARK 470 SER B 195 OG REMARK 470 GLU B 197 CG CD OE1 OE2 REMARK 470 VAL B 201 CG1 CG2 REMARK 470 CYS B 202 SG REMARK 470 GLU B 203 CG CD OE1 OE2 REMARK 470 ASP B 204 CG OD1 OD2 REMARK 470 GLU B 205 CG CD OE1 OE2 REMARK 470 ASP B 206 CG OD1 OD2 REMARK 470 SER B 211 OG REMARK 470 ASN B 214 CG OD1 ND2 REMARK 470 ILE B 215 CG1 CG2 CD1 REMARK 470 LYS B 220 CG CD CE NZ REMARK 470 LEU B 221 CG CD1 CD2 REMARK 470 ARG B 223 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 224 CG CD OE1 NE2 REMARK 470 GLN B 251 CG CD OE1 NE2 REMARK 470 GLU B 254 CG CD OE1 OE2 REMARK 470 GLU B 255 CG CD OE1 OE2 REMARK 470 VAL B 260 CG1 CG2 REMARK 470 ILE B 263 CG1 CG2 CD1 REMARK 470 SER B 267 OG REMARK 470 LYS B 270 CG CD CE NZ REMARK 470 LYS B 273 CG CD CE NZ REMARK 470 GLN B 312 CG CD OE1 NE2 REMARK 470 GLN B 314 CG CD OE1 NE2 REMARK 470 ARG B 315 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 316 CG CD OE1 NE2 REMARK 470 CYS B 322 SG REMARK 470 GLU B 324 CG CD OE1 OE2 REMARK 470 ASP B 325 CG OD1 OD2 REMARK 470 THR B 327 OG1 CG2 REMARK 470 GLU B 328 CG CD OE1 OE2 REMARK 470 SER B 329 OG REMARK 470 GLN B 332 CG CD OE1 NE2 REMARK 470 ARG B 340 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 346 CG CD OE1 OE2 REMARK 470 VAL B 347 CG1 CG2 REMARK 470 LYS B 349 CG CD CE NZ REMARK 470 LEU B 351 CG CD1 CD2 REMARK 470 GLN B 356 CG CD OE1 NE2 REMARK 470 ARG B 363 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 367 CG CD OE1 OE2 REMARK 470 ASP B 374 CG OD1 OD2 REMARK 470 ASN B 376 CG OD1 ND2 REMARK 470 THR B 379 OG1 CG2 REMARK 470 ASN B 380 CG OD1 ND2 REMARK 470 ARG B 381 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 384 CG OD1 ND2 REMARK 470 LEU B 385 CG CD1 CD2 REMARK 470 LYS B 387 CG CD CE NZ REMARK 470 GLU B 388 CG CD OE1 OE2 REMARK 470 GLU B 389 CG CD OE1 OE2 REMARK 470 LYS B 390 CG CD CE NZ REMARK 470 ARG B 392 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 394 CG CD CE NZ REMARK 470 LYS B 397 CG CD CE NZ REMARK 470 LYS B 401 CG CD CE NZ REMARK 470 GLU B 403 CG CD OE1 OE2 REMARK 470 LEU B 406 CG CD1 CD2 REMARK 470 LYS B 407 CG CD CE NZ REMARK 470 GLU B 411 CG CD OE1 OE2 REMARK 470 LEU B 412 CG CD1 CD2 REMARK 470 GLN B 415 CG CD OE1 NE2 REMARK 470 GLU B 416 CG CD OE1 OE2 REMARK 470 SER B 418 OG REMARK 470 LYS B 419 CG CD CE NZ REMARK 470 PHE B 421 CG CD1 CD2 CE1 CE2 CZ REMARK 470 VAL B 423 CG1 CG2 REMARK 470 ASN B 424 CG OD1 ND2 REMARK 470 GLU B 430 CG CD OE1 OE2 REMARK 470 GLU B 434 CG CD OE1 OE2 REMARK 470 GLN B 435 CG CD OE1 NE2 REMARK 470 GLU B 437 CG CD OE1 OE2 REMARK 470 MET B 438 CG SD CE REMARK 470 ARG B 440 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 441 CG CD1 CD2 REMARK 470 GLU B 442 CG CD OE1 OE2 REMARK 470 LYS B 443 CG CD CE NZ REMARK 470 GLU B 444 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 320 C - N - CA ANGL. DEV. = -11.8 DEGREES REMARK 500 PRO A 320 C - N - CD ANGL. DEV. = 12.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 83 -159.01 -91.91 REMARK 500 PRO A 87 92.34 -63.08 REMARK 500 PRO A 138 -72.76 -59.34 REMARK 500 ASP A 143 73.41 42.42 REMARK 500 PRO A 192 110.47 -38.90 REMARK 500 ASP A 204 -156.08 67.93 REMARK 500 ASP A 206 -5.64 67.07 REMARK 500 LEU A 210 49.06 -79.32 REMARK 500 LEU A 250 -158.83 -97.03 REMARK 500 SER A 265 -152.89 -135.02 REMARK 500 ALA A 269 -141.14 54.30 REMARK 500 LYS A 270 48.58 -96.44 REMARK 500 CYS A 308 -77.18 -159.43 REMARK 500 ALA A 319 -93.29 67.94 REMARK 500 PHE A 321 -33.09 -155.31 REMARK 500 ASN A 376 -73.54 -74.66 REMARK 500 ASN A 384 81.60 58.45 REMARK 500 LYS A 427 73.52 45.06 REMARK 500 PRO B 32 61.73 -67.31 REMARK 500 GLU B 33 -53.03 60.91 REMARK 500 GLN B 89 -160.83 -168.44 REMARK 500 THR B 94 31.88 -98.96 REMARK 500 ALA B 145 73.23 55.06 REMARK 500 VAL B 147 78.50 56.23 REMARK 500 SER B 149 -142.15 -116.56 REMARK 500 ASP B 204 -119.12 54.93 REMARK 500 GLU B 205 19.17 57.61 REMARK 500 ILE B 252 84.61 53.12 REMARK 500 MET B 264 34.46 -84.98 REMARK 500 SER B 265 -95.39 -85.10 REMARK 500 ALA B 319 87.24 -4.68 REMARK 500 ALA B 323 165.33 81.62 REMARK 500 ASN B 384 86.67 67.56 REMARK 500 SER B 418 170.28 -58.86 REMARK 500 LYS B 419 -163.46 66.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4L3I RELATED DB: PDB REMARK 900 SELENOMETHIONINE DERIVATIVE DBREF 4L6Y A 1 486 UNP O43663 PRC1_HUMAN 1 486 DBREF 4L6Y B 1 486 UNP O43663 PRC1_HUMAN 1 486 SEQADV 4L6Y GLY A -3 UNP O43663 EXPRESSION TAG SEQADV 4L6Y ALA A -2 UNP O43663 EXPRESSION TAG SEQADV 4L6Y ALA A -1 UNP O43663 EXPRESSION TAG SEQADV 4L6Y ALA A 0 UNP O43663 EXPRESSION TAG SEQADV 4L6Y GLU A 187 UNP O43663 ALA 187 VARIANT SEQADV 4L6Y GLY B -3 UNP O43663 EXPRESSION TAG SEQADV 4L6Y ALA B -2 UNP O43663 EXPRESSION TAG SEQADV 4L6Y ALA B -1 UNP O43663 EXPRESSION TAG SEQADV 4L6Y ALA B 0 UNP O43663 EXPRESSION TAG SEQADV 4L6Y GLU B 187 UNP O43663 ALA 187 VARIANT SEQRES 1 A 490 GLY ALA ALA ALA MET ARG ARG SER GLU VAL LEU ALA GLU SEQRES 2 A 490 GLU SER ILE VAL CYS LEU GLN LYS ALA LEU ASN HIS LEU SEQRES 3 A 490 ARG GLU ILE TRP GLU LEU ILE GLY ILE PRO GLU ASP GLN SEQRES 4 A 490 ARG LEU GLN ARG THR GLU VAL VAL LYS LYS HIS ILE LYS SEQRES 5 A 490 GLU LEU LEU ASP MET MET ILE ALA GLU GLU GLU SER LEU SEQRES 6 A 490 LYS GLU ARG LEU ILE LYS SER ILE SER VAL CYS GLN LYS SEQRES 7 A 490 GLU LEU ASN THR LEU CYS SER GLU LEU HIS VAL GLU PRO SEQRES 8 A 490 PHE GLN GLU GLU GLY GLU THR THR ILE LEU GLN LEU GLU SEQRES 9 A 490 LYS ASP LEU ARG THR GLN VAL GLU LEU MET ARG LYS GLN SEQRES 10 A 490 LYS LYS GLU ARG LYS GLN GLU LEU LYS LEU LEU GLN GLU SEQRES 11 A 490 GLN ASP GLN GLU LEU CYS GLU ILE LEU CYS MET PRO HIS SEQRES 12 A 490 TYR ASP ILE ASP SER ALA SER VAL PRO SER LEU GLU GLU SEQRES 13 A 490 LEU ASN GLN PHE ARG GLN HIS VAL THR THR LEU ARG GLU SEQRES 14 A 490 THR LYS ALA SER ARG ARG GLU GLU PHE VAL SER ILE LYS SEQRES 15 A 490 ARG GLN ILE ILE LEU CYS MET GLU GLU LEU ASP HIS THR SEQRES 16 A 490 PRO ASP THR SER PHE GLU ARG ASP VAL VAL CYS GLU ASP SEQRES 17 A 490 GLU ASP ALA PHE CYS LEU SER LEU GLU ASN ILE ALA THR SEQRES 18 A 490 LEU GLN LYS LEU LEU ARG GLN LEU GLU MET GLN LYS SER SEQRES 19 A 490 GLN ASN GLU ALA VAL CYS GLU GLY LEU ARG THR GLN ILE SEQRES 20 A 490 ARG GLU LEU TRP ASP ARG LEU GLN ILE PRO GLU GLU GLU SEQRES 21 A 490 ARG GLU ALA VAL ALA THR ILE MET SER GLY SER LYS ALA SEQRES 22 A 490 LYS VAL ARG LYS ALA LEU GLN LEU GLU VAL ASP ARG LEU SEQRES 23 A 490 GLU GLU LEU LYS MET GLN ASN MET LYS LYS VAL ILE GLU SEQRES 24 A 490 ALA ILE ARG VAL GLU LEU VAL GLN TYR TRP ASP GLN CYS SEQRES 25 A 490 PHE TYR SER GLN GLU GLN ARG GLN ALA PHE ALA PRO PHE SEQRES 26 A 490 CYS ALA GLU ASP TYR THR GLU SER LEU LEU GLN LEU HIS SEQRES 27 A 490 ASP ALA GLU ILE VAL ARG LEU LYS ASN TYR TYR GLU VAL SEQRES 28 A 490 HIS LYS GLU LEU PHE GLU GLY VAL GLN LYS TRP GLU GLU SEQRES 29 A 490 THR TRP ARG LEU PHE LEU GLU PHE GLU ARG LYS ALA SER SEQRES 30 A 490 ASP PRO ASN ARG PHE THR ASN ARG GLY GLY ASN LEU LEU SEQRES 31 A 490 LYS GLU GLU LYS GLN ARG ALA LYS LEU GLN LYS MET LEU SEQRES 32 A 490 PRO LYS LEU GLU GLU GLU LEU LYS ALA ARG ILE GLU LEU SEQRES 33 A 490 TRP GLU GLN GLU HIS SER LYS ALA PHE MET VAL ASN GLY SEQRES 34 A 490 GLN LYS PHE MET GLU TYR VAL ALA GLU GLN TRP GLU MET SEQRES 35 A 490 HIS ARG LEU GLU LYS GLU ARG ALA LYS GLN GLU ARG GLN SEQRES 36 A 490 LEU LYS ASN LYS LYS GLN THR GLU THR GLU MET LEU TYR SEQRES 37 A 490 GLY SER ALA PRO ARG THR PRO SER LYS ARG ARG GLY LEU SEQRES 38 A 490 ALA PRO ASN THR PRO GLY LYS ALA ARG SEQRES 1 B 490 GLY ALA ALA ALA MET ARG ARG SER GLU VAL LEU ALA GLU SEQRES 2 B 490 GLU SER ILE VAL CYS LEU GLN LYS ALA LEU ASN HIS LEU SEQRES 3 B 490 ARG GLU ILE TRP GLU LEU ILE GLY ILE PRO GLU ASP GLN SEQRES 4 B 490 ARG LEU GLN ARG THR GLU VAL VAL LYS LYS HIS ILE LYS SEQRES 5 B 490 GLU LEU LEU ASP MET MET ILE ALA GLU GLU GLU SER LEU SEQRES 6 B 490 LYS GLU ARG LEU ILE LYS SER ILE SER VAL CYS GLN LYS SEQRES 7 B 490 GLU LEU ASN THR LEU CYS SER GLU LEU HIS VAL GLU PRO SEQRES 8 B 490 PHE GLN GLU GLU GLY GLU THR THR ILE LEU GLN LEU GLU SEQRES 9 B 490 LYS ASP LEU ARG THR GLN VAL GLU LEU MET ARG LYS GLN SEQRES 10 B 490 LYS LYS GLU ARG LYS GLN GLU LEU LYS LEU LEU GLN GLU SEQRES 11 B 490 GLN ASP GLN GLU LEU CYS GLU ILE LEU CYS MET PRO HIS SEQRES 12 B 490 TYR ASP ILE ASP SER ALA SER VAL PRO SER LEU GLU GLU SEQRES 13 B 490 LEU ASN GLN PHE ARG GLN HIS VAL THR THR LEU ARG GLU SEQRES 14 B 490 THR LYS ALA SER ARG ARG GLU GLU PHE VAL SER ILE LYS SEQRES 15 B 490 ARG GLN ILE ILE LEU CYS MET GLU GLU LEU ASP HIS THR SEQRES 16 B 490 PRO ASP THR SER PHE GLU ARG ASP VAL VAL CYS GLU ASP SEQRES 17 B 490 GLU ASP ALA PHE CYS LEU SER LEU GLU ASN ILE ALA THR SEQRES 18 B 490 LEU GLN LYS LEU LEU ARG GLN LEU GLU MET GLN LYS SER SEQRES 19 B 490 GLN ASN GLU ALA VAL CYS GLU GLY LEU ARG THR GLN ILE SEQRES 20 B 490 ARG GLU LEU TRP ASP ARG LEU GLN ILE PRO GLU GLU GLU SEQRES 21 B 490 ARG GLU ALA VAL ALA THR ILE MET SER GLY SER LYS ALA SEQRES 22 B 490 LYS VAL ARG LYS ALA LEU GLN LEU GLU VAL ASP ARG LEU SEQRES 23 B 490 GLU GLU LEU LYS MET GLN ASN MET LYS LYS VAL ILE GLU SEQRES 24 B 490 ALA ILE ARG VAL GLU LEU VAL GLN TYR TRP ASP GLN CYS SEQRES 25 B 490 PHE TYR SER GLN GLU GLN ARG GLN ALA PHE ALA PRO PHE SEQRES 26 B 490 CYS ALA GLU ASP TYR THR GLU SER LEU LEU GLN LEU HIS SEQRES 27 B 490 ASP ALA GLU ILE VAL ARG LEU LYS ASN TYR TYR GLU VAL SEQRES 28 B 490 HIS LYS GLU LEU PHE GLU GLY VAL GLN LYS TRP GLU GLU SEQRES 29 B 490 THR TRP ARG LEU PHE LEU GLU PHE GLU ARG LYS ALA SER SEQRES 30 B 490 ASP PRO ASN ARG PHE THR ASN ARG GLY GLY ASN LEU LEU SEQRES 31 B 490 LYS GLU GLU LYS GLN ARG ALA LYS LEU GLN LYS MET LEU SEQRES 32 B 490 PRO LYS LEU GLU GLU GLU LEU LYS ALA ARG ILE GLU LEU SEQRES 33 B 490 TRP GLU GLN GLU HIS SER LYS ALA PHE MET VAL ASN GLY SEQRES 34 B 490 GLN LYS PHE MET GLU TYR VAL ALA GLU GLN TRP GLU MET SEQRES 35 B 490 HIS ARG LEU GLU LYS GLU ARG ALA LYS GLN GLU ARG GLN SEQRES 36 B 490 LEU LYS ASN LYS LYS GLN THR GLU THR GLU MET LEU TYR SEQRES 37 B 490 GLY SER ALA PRO ARG THR PRO SER LYS ARG ARG GLY LEU SEQRES 38 B 490 ALA PRO ASN THR PRO GLY LYS ALA ARG HELIX 1 1 ARG A 2 ILE A 29 1 28 HELIX 2 2 PRO A 32 LEU A 83 1 52 HELIX 3 3 THR A 95 CYS A 136 1 42 HELIX 4 4 SER A 149 ASP A 189 1 41 HELIX 5 5 THR A 194 CYS A 202 1 9 HELIX 6 6 SER A 211 LEU A 250 1 40 HELIX 7 7 PRO A 253 MET A 264 1 12 HELIX 8 8 LYS A 270 GLN A 307 1 38 HELIX 9 9 SER A 311 ALA A 317 1 7 HELIX 10 10 THR A 327 HIS A 348 1 22 HELIX 11 11 HIS A 348 ASP A 374 1 27 HELIX 12 12 ASN A 384 HIS A 417 1 34 HELIX 13 13 LYS A 427 ARG A 450 1 24 HELIX 14 14 ARG B 3 GLY B 30 1 28 HELIX 15 15 GLU B 33 LEU B 83 1 51 HELIX 16 16 THR B 95 LEU B 135 1 41 HELIX 17 17 LEU B 150 LEU B 188 1 39 HELIX 18 18 THR B 194 CYS B 202 1 9 HELIX 19 19 SER B 211 ARG B 249 1 39 HELIX 20 20 PRO B 253 ALA B 261 1 9 HELIX 21 21 LYS B 268 CYS B 308 1 41 HELIX 22 22 GLU B 313 ALA B 319 1 7 HELIX 23 23 THR B 327 ALA B 372 1 46 HELIX 24 24 ASN B 384 LEU B 406 1 23 HELIX 25 25 LEU B 406 HIS B 417 1 12 HELIX 26 26 GLU B 430 LYS B 443 1 14 CRYST1 60.660 209.800 113.410 90.00 105.64 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016485 0.000000 0.004615 0.00000 SCALE2 0.000000 0.004766 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009157 0.00000