data_4L8H # _entry.id 4L8H # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4L8H pdb_00004l8h 10.2210/pdb4l8h/pdb NDB NA2565 ? ? RCSB RCSB080313 ? ? WWPDB D_1000080313 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4L8H _pdbx_database_status.recvd_initial_deposition_date 2013-06-17 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Rumnieks, J.' 1 'Tars, K.' 2 # _citation.id primary _citation.title 'Crystal structure of the bacteriophage q beta coat protein in complex with the RNA operator of the replicase gene.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 426 _citation.page_first 1039 _citation.page_last 1049 _citation.year 2014 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24035813 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2013.08.025 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Rumnieks, J.' 1 ? primary 'Tars, K.' 2 ? # _cell.entry_id 4L8H _cell.length_a 75.840 _cell.length_b 75.840 _cell.length_c 303.490 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4L8H _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Coat protein' 14147.862 2 ? P42R,C74G,C80G,N129R ? ? 2 polymer syn 'RNA operator hairpin' 6391.863 1 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 6 ? ? ? ? 4 water nat water 18.015 90 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;AKLETVTLGNIGKDGKQTLVLNPRGVNPTNGVASLSQAGAVRALEKRVTVSVSQPSRNRKNYKVQVKIQNPTAGTANGSG DPSVTRQAYADVTFSFTQYSTDEERAFVRTELAALLASPLLIDAIDQLRPAY ; ;AKLETVTLGNIGKDGKQTLVLNPRGVNPTNGVASLSQAGAVRALEKRVTVSVSQPSRNRKNYKVQVKIQNPTAGTANGSG DPSVTRQAYADVTFSFTQYSTDEERAFVRTELAALLASPLLIDAIDQLRPAY ; A,B ? 2 polyribonucleotide no no AUGCAUGUCUAAGACAGCAU AUGCAUGUCUAAGACAGCAU R ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 LYS n 1 3 LEU n 1 4 GLU n 1 5 THR n 1 6 VAL n 1 7 THR n 1 8 LEU n 1 9 GLY n 1 10 ASN n 1 11 ILE n 1 12 GLY n 1 13 LYS n 1 14 ASP n 1 15 GLY n 1 16 LYS n 1 17 GLN n 1 18 THR n 1 19 LEU n 1 20 VAL n 1 21 LEU n 1 22 ASN n 1 23 PRO n 1 24 ARG n 1 25 GLY n 1 26 VAL n 1 27 ASN n 1 28 PRO n 1 29 THR n 1 30 ASN n 1 31 GLY n 1 32 VAL n 1 33 ALA n 1 34 SER n 1 35 LEU n 1 36 SER n 1 37 GLN n 1 38 ALA n 1 39 GLY n 1 40 ALA n 1 41 VAL n 1 42 ARG n 1 43 ALA n 1 44 LEU n 1 45 GLU n 1 46 LYS n 1 47 ARG n 1 48 VAL n 1 49 THR n 1 50 VAL n 1 51 SER n 1 52 VAL n 1 53 SER n 1 54 GLN n 1 55 PRO n 1 56 SER n 1 57 ARG n 1 58 ASN n 1 59 ARG n 1 60 LYS n 1 61 ASN n 1 62 TYR n 1 63 LYS n 1 64 VAL n 1 65 GLN n 1 66 VAL n 1 67 LYS n 1 68 ILE n 1 69 GLN n 1 70 ASN n 1 71 PRO n 1 72 THR n 1 73 ALA n 1 74 GLY n 1 75 THR n 1 76 ALA n 1 77 ASN n 1 78 GLY n 1 79 SER n 1 80 GLY n 1 81 ASP n 1 82 PRO n 1 83 SER n 1 84 VAL n 1 85 THR n 1 86 ARG n 1 87 GLN n 1 88 ALA n 1 89 TYR n 1 90 ALA n 1 91 ASP n 1 92 VAL n 1 93 THR n 1 94 PHE n 1 95 SER n 1 96 PHE n 1 97 THR n 1 98 GLN n 1 99 TYR n 1 100 SER n 1 101 THR n 1 102 ASP n 1 103 GLU n 1 104 GLU n 1 105 ARG n 1 106 ALA n 1 107 PHE n 1 108 VAL n 1 109 ARG n 1 110 THR n 1 111 GLU n 1 112 LEU n 1 113 ALA n 1 114 ALA n 1 115 LEU n 1 116 LEU n 1 117 ALA n 1 118 SER n 1 119 PRO n 1 120 LEU n 1 121 LEU n 1 122 ILE n 1 123 ASP n 1 124 ALA n 1 125 ILE n 1 126 ASP n 1 127 GLN n 1 128 LEU n 1 129 ARG n 1 130 PRO n 1 131 ALA n 1 132 TYR n 2 1 A n 2 2 U n 2 3 G n 2 4 C n 2 5 A n 2 6 U n 2 7 G n 2 8 U n 2 9 C n 2 10 U n 2 11 A n 2 12 A n 2 13 G n 2 14 A n 2 15 C n 2 16 A n 2 17 G n 2 18 C n 2 19 A n 2 20 U n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene coat _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Enterobacteria phage Qbeta' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 39803 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28-Qb150 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Chemical synthesis' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP COAT_BPQBE P03615 1 ;AKLETVTLGNIGKDGKQTLVLNPRGVNPTNGVASLSQAGAVPALEKRVTVSVSQPSRNRKNYKVQVKIQNPTACTANGSC DPSVTRQAYADVTFSFTQYSTDEERAFVRTELAALLASPLLIDAIDQLNPAY ; 2 ? 2 PDB 4L8H 4L8H 2 AUGCAUGUCUAAGACAGCAU ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4L8H A 1 ? 132 ? P03615 2 ? 133 ? 1 132 2 1 4L8H B 1 ? 132 ? P03615 2 ? 133 ? 1 132 3 2 4L8H R 1 ? 20 ? 4L8H 1 ? 20 ? 1 20 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4L8H ARG A 42 ? UNP P03615 PRO 43 'engineered mutation' 42 1 1 4L8H GLY A 74 ? UNP P03615 CYS 75 'engineered mutation' 74 2 1 4L8H GLY A 80 ? UNP P03615 CYS 81 'engineered mutation' 80 3 1 4L8H ARG A 129 ? UNP P03615 ASN 130 'engineered mutation' 129 4 2 4L8H ARG B 42 ? UNP P03615 PRO 43 'engineered mutation' 42 5 2 4L8H GLY B 74 ? UNP P03615 CYS 75 'engineered mutation' 74 6 2 4L8H GLY B 80 ? UNP P03615 CYS 81 'engineered mutation' 80 7 2 4L8H ARG B 129 ? UNP P03615 ASN 130 'engineered mutation' 129 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 4L8H _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.63 _exptl_crystal.density_percent_sol 66.13 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.pdbx_details '0.1 M sodium acetate, 0.2 M zinc acetate, 9% PEG 3000, pH 4.5, VAPOR DIFFUSION, SITTING DROP, temperature 293.0K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2013-02-01 _diffrn_detector.details 'multilayer mirrors' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal monochromator, Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'MAX II BEAMLINE I911-3' _diffrn_source.pdbx_synchrotron_site 'MAX II' _diffrn_source.pdbx_synchrotron_beamline I911-3 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.entry_id 4L8H _reflns.observed_criterion_sigma_I . _reflns.observed_criterion_sigma_F . _reflns.d_resolution_low 40.064 _reflns.d_resolution_high 2.400 _reflns.number_obs 21342 _reflns.number_all 21342 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.09 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 9.7 _reflns.B_iso_Wilson_estimate 34.937 _reflns.pdbx_redundancy 3.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.4 _reflns_shell.d_res_low 2.53 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.614 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.2 _reflns_shell.pdbx_redundancy 3.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4L8H _refine.ls_number_reflns_obs 21269 _refine.ls_number_reflns_all 21269 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 37.63 _refine.ls_d_res_high 2.40 _refine.ls_percent_reflns_obs 99.85 _refine.ls_R_factor_obs 0.25453 _refine.ls_R_factor_all 0.25453 _refine.ls_R_factor_R_work 0.25267 _refine.ls_R_factor_R_free 0.28839 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1089 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.901 _refine.correlation_coeff_Fo_to_Fc_free 0.871 _refine.B_iso_mean 34.194 _refine.aniso_B[1][1] -0.02 _refine.aniso_B[2][2] -0.02 _refine.aniso_B[3][3] 0.03 _refine.aniso_B[1][2] -0.01 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB entry 1QBE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.291 _refine.pdbx_overall_ESU_R_Free 0.242 _refine.overall_SU_ML 0.171 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 7.266 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1855 _refine_hist.pdbx_number_atoms_nucleic_acid 423 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 90 _refine_hist.number_atoms_total 2374 _refine_hist.d_res_high 2.40 _refine_hist.d_res_low 37.63 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.016 0.022 ? 2350 ? 'X-RAY DIFFRACTION' r_bond_other_d ? ? ? ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.670 2.204 ? 3286 ? 'X-RAY DIFFRACTION' r_angle_other_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.843 5.000 ? 240 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 35.344 24.250 ? 80 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 14.496 15.000 ? 317 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 15.915 15.000 ? 16 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.094 0.200 ? 409 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.007 0.021 ? 1608 ? 'X-RAY DIFFRACTION' r_gen_planes_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1.020 1.500 ? 1217 ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1.908 2.000 ? 1965 ? 'X-RAY DIFFRACTION' r_mcangle_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_scbond_it 2.404 3.000 ? 1133 ? 'X-RAY DIFFRACTION' r_scbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_it 3.851 4.500 ? 1321 ? 'X-RAY DIFFRACTION' r_scangle_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_long_range_B_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_long_range_B_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.400 _refine_ls_shell.d_res_low 2.462 _refine_ls_shell.number_reflns_R_work 1448 _refine_ls_shell.R_factor_R_work 0.368 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.363 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 79 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4L8H _struct.title 'Bacteriophage Qbeta coat protein in complex with RNA operator hairpin' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4L8H _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' _struct_keywords.text 'Alpha Beta 2-Layer Sandwich, Levivirus coat protein, Structural, Translational repressor, RNA binding, Virion, STRUCTURAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 4 ? K N N 4 ? L N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 101 ? LEU A 116 ? THR A 101 LEU A 116 1 ? 16 HELX_P HELX_P2 2 SER A 118 ? ASP A 126 ? SER A 118 ASP A 126 1 ? 9 HELX_P HELX_P3 3 VAL B 41 ? GLU B 45 ? VAL B 41 GLU B 45 5 ? 5 HELX_P HELX_P4 4 THR B 101 ? LEU B 116 ? THR B 101 LEU B 116 1 ? 16 HELX_P HELX_P5 5 SER B 118 ? ASP B 126 ? SER B 118 ASP B 126 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 91 OD2 ? ? ? 1_555 I ZN . ZN ? ? A ASP 91 R ZN 105 1_555 ? ? ? ? ? ? ? 1.816 ? ? metalc2 metalc ? ? J HOH . O ? ? ? 1_555 I ZN . ZN ? ? A HOH 201 R ZN 105 1_555 ? ? ? ? ? ? ? 2.232 ? ? metalc3 metalc ? ? J HOH . O ? ? ? 1_555 F ZN . ZN ? ? A HOH 229 R ZN 102 1_555 ? ? ? ? ? ? ? 2.511 ? ? metalc4 metalc ? ? B ASP 102 OD1 ? ? ? 1_555 D ZN . ZN ? ? B ASP 102 B ZN 201 1_555 ? ? ? ? ? ? ? 1.988 ? ? metalc5 metalc ? ? B GLU 103 OE2 ? ? ? 1_555 D ZN . ZN ? ? B GLU 103 B ZN 201 1_555 ? ? ? ? ? ? ? 2.063 ? ? metalc6 metalc ? ? B GLU 103 OE1 ? ? ? 1_555 D ZN . ZN ? ? B GLU 103 B ZN 201 1_555 ? ? ? ? ? ? ? 2.521 ? ? metalc7 metalc ? ? C U 6 OP1 ? ? ? 1_555 H ZN . ZN ? ? R U 6 R ZN 104 1_555 ? ? ? ? ? ? ? 2.160 ? ? metalc8 metalc ? ? C G 7 N7 ? ? ? 1_555 E ZN . ZN ? ? R G 7 R ZN 101 1_555 ? ? ? ? ? ? ? 2.416 ? ? metalc9 metalc ? ? C A 11 N1 ? ? ? 1_555 I ZN . ZN ? ? R A 11 R ZN 105 1_555 ? ? ? ? ? ? ? 2.230 ? ? metalc10 metalc ? ? C G 13 N7 ? ? ? 1_555 F ZN . ZN ? ? R G 13 R ZN 102 1_555 ? ? ? ? ? ? ? 2.383 ? ? metalc11 metalc ? ? F ZN . ZN ? ? ? 1_555 L HOH . O ? ? R ZN 102 R HOH 202 1_555 ? ? ? ? ? ? ? 2.561 ? ? metalc12 metalc ? ? I ZN . ZN ? ? ? 1_555 L HOH . O ? ? R ZN 105 R HOH 201 1_555 ? ? ? ? ? ? ? 2.579 ? ? hydrog1 hydrog ? ? C A 1 N1 ? ? ? 1_555 C U 20 N3 ? ? R A 1 R U 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C A 1 N6 ? ? ? 1_555 C U 20 O4 ? ? R A 1 R U 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C U 2 N3 ? ? ? 1_555 C A 19 N1 ? ? R U 2 R A 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C U 2 O4 ? ? ? 1_555 C A 19 N6 ? ? R U 2 R A 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C G 3 N1 ? ? ? 1_555 C C 18 N3 ? ? R G 3 R C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C G 3 N2 ? ? ? 1_555 C C 18 O2 ? ? R G 3 R C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C G 3 O6 ? ? ? 1_555 C C 18 N4 ? ? R G 3 R C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C C 4 O2 ? ? ? 1_555 C G 17 N2 ? ? R C 4 R G 17 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog9 hydrog ? ? C U 6 N3 ? ? ? 1_555 C A 16 N1 ? ? R U 6 R A 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C U 6 O4 ? ? ? 1_555 C A 16 N6 ? ? R U 6 R A 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C G 7 N1 ? ? ? 1_555 C C 15 N3 ? ? R G 7 R C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C G 7 N2 ? ? ? 1_555 C C 15 O2 ? ? R G 7 R C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C G 7 O6 ? ? ? 1_555 C C 15 N4 ? ? R G 7 R C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C U 8 N3 ? ? ? 1_555 C A 14 N1 ? ? R U 8 R A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C U 8 O4 ? ? ? 1_555 C A 14 N6 ? ? R U 8 R A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C C 9 N3 ? ? ? 1_555 C G 13 N1 ? ? R C 9 R G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C C 9 N4 ? ? ? 1_555 C G 13 O6 ? ? R C 9 R G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C C 9 O2 ? ? ? 1_555 C G 13 N2 ? ? R C 9 R G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 12 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel A 10 11 ? anti-parallel A 11 12 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 6 ? ILE A 11 ? VAL A 6 ILE A 11 A 2 GLN A 17 ? VAL A 26 ? GLN A 17 VAL A 26 A 3 ALA A 33 ? SER A 36 ? ALA A 33 SER A 36 A 4 ARG A 47 ? SER A 53 ? ARG A 47 SER A 53 A 5 TYR A 62 ? THR A 72 ? TYR A 62 THR A 72 A 6 ARG A 86 ? PHE A 96 ? ARG A 86 PHE A 96 A 7 ARG B 86 ? PHE B 96 ? ARG B 86 PHE B 96 A 8 TYR B 62 ? THR B 72 ? TYR B 62 THR B 72 A 9 ARG B 47 ? SER B 53 ? ARG B 47 SER B 53 A 10 ALA B 33 ? GLN B 37 ? ALA B 33 GLN B 37 A 11 GLN B 17 ? VAL B 26 ? GLN B 17 VAL B 26 A 12 VAL B 6 ? ILE B 11 ? VAL B 6 ILE B 11 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 6 ? N VAL A 6 O LEU A 21 ? O LEU A 21 A 2 3 N ARG A 24 ? N ARG A 24 O SER A 34 ? O SER A 34 A 3 4 N ALA A 33 ? N ALA A 33 O VAL A 50 ? O VAL A 50 A 4 5 N ARG A 47 ? N ARG A 47 O GLN A 69 ? O GLN A 69 A 5 6 N ASN A 70 ? N ASN A 70 O ALA A 88 ? O ALA A 88 A 6 7 N ASP A 91 ? N ASP A 91 O THR B 93 ? O THR B 93 A 7 8 O VAL B 92 ? O VAL B 92 N VAL B 66 ? N VAL B 66 A 8 9 O LYS B 67 ? O LYS B 67 N THR B 49 ? N THR B 49 A 9 10 O VAL B 50 ? O VAL B 50 N ALA B 33 ? N ALA B 33 A 10 11 O SER B 34 ? O SER B 34 N ARG B 24 ? N ARG B 24 A 11 12 O LEU B 21 ? O LEU B 21 N VAL B 6 ? N VAL B 6 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B ZN 201 ? 6 'BINDING SITE FOR RESIDUE ZN B 201' AC2 Software R ZN 101 ? 1 'BINDING SITE FOR RESIDUE ZN R 101' AC3 Software R ZN 102 ? 4 'BINDING SITE FOR RESIDUE ZN R 102' AC4 Software R ZN 103 ? 2 'BINDING SITE FOR RESIDUE ZN R 103' AC5 Software R ZN 104 ? 2 'BINDING SITE FOR RESIDUE ZN R 104' AC6 Software R ZN 105 ? 4 'BINDING SITE FOR RESIDUE ZN R 105' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 LYS A 13 ? LYS A 13 . ? 1_555 ? 2 AC1 6 ASP A 102 ? ASP A 102 . ? 8_545 ? 3 AC1 6 GLU A 103 ? GLU A 103 . ? 8_545 ? 4 AC1 6 LYS B 13 ? LYS B 13 . ? 8_545 ? 5 AC1 6 ASP B 102 ? ASP B 102 . ? 1_555 ? 6 AC1 6 GLU B 103 ? GLU B 103 . ? 1_555 ? 7 AC2 1 G C 7 ? G R 7 . ? 1_555 ? 8 AC3 4 LYS A 67 ? LYS A 67 . ? 1_555 ? 9 AC3 4 HOH J . ? HOH A 229 . ? 1_555 ? 10 AC3 4 G C 13 ? G R 13 . ? 1_555 ? 11 AC3 4 HOH L . ? HOH R 202 . ? 1_555 ? 12 AC4 2 A C 16 ? A R 16 . ? 1_555 ? 13 AC4 2 G C 17 ? G R 17 . ? 1_555 ? 14 AC5 2 A C 5 ? A R 5 . ? 1_555 ? 15 AC5 2 U C 6 ? U R 6 . ? 1_555 ? 16 AC6 4 ASP A 91 ? ASP A 91 . ? 1_555 ? 17 AC6 4 HOH J . ? HOH A 201 . ? 1_555 ? 18 AC6 4 A C 11 ? A R 11 . ? 1_555 ? 19 AC6 4 HOH L . ? HOH R 201 . ? 1_555 ? # _database_PDB_matrix.entry_id 4L8H _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4L8H _atom_sites.fract_transf_matrix[1][1] 0.013186 _atom_sites.fract_transf_matrix[1][2] 0.007613 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015225 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003295 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 LEU 3 3 3 LEU LEU A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 ASN 10 10 10 ASN ASN A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 ASP 14 14 14 ASP ASP A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 GLN 17 17 17 GLN GLN A . n A 1 18 THR 18 18 18 THR THR A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 ASN 22 22 22 ASN ASN A . n A 1 23 PRO 23 23 23 PRO PRO A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 PRO 28 28 28 PRO PRO A . n A 1 29 THR 29 29 29 THR THR A . n A 1 30 ASN 30 30 30 ASN ASN A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 GLN 37 37 37 GLN GLN A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 ARG 42 42 42 ARG ARG A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 ARG 47 47 47 ARG ARG A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 VAL 50 50 50 VAL VAL A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 SER 53 53 53 SER SER A . n A 1 54 GLN 54 54 54 GLN GLN A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 SER 56 56 56 SER SER A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 ASN 58 58 58 ASN ASN A . n A 1 59 ARG 59 59 59 ARG ARG A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 TYR 62 62 62 TYR TYR A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 GLN 65 65 65 GLN GLN A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 LYS 67 67 67 LYS LYS A . n A 1 68 ILE 68 68 68 ILE ILE A . n A 1 69 GLN 69 69 69 GLN GLN A . n A 1 70 ASN 70 70 70 ASN ASN A . n A 1 71 PRO 71 71 71 PRO PRO A . n A 1 72 THR 72 72 72 THR THR A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 GLY 74 74 ? ? ? A . n A 1 75 THR 75 75 ? ? ? A . n A 1 76 ALA 76 76 ? ? ? A . n A 1 77 ASN 77 77 ? ? ? A . n A 1 78 GLY 78 78 ? ? ? A . n A 1 79 SER 79 79 ? ? ? A . n A 1 80 GLY 80 80 ? ? ? A . n A 1 81 ASP 81 81 ? ? ? A . n A 1 82 PRO 82 82 ? ? ? A . n A 1 83 SER 83 83 ? ? ? A . n A 1 84 VAL 84 84 ? ? ? A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 ARG 86 86 86 ARG ARG A . n A 1 87 GLN 87 87 87 GLN GLN A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 TYR 89 89 89 TYR TYR A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 ASP 91 91 91 ASP ASP A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 PHE 94 94 94 PHE PHE A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 PHE 96 96 96 PHE PHE A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 GLN 98 98 98 GLN GLN A . n A 1 99 TYR 99 99 99 TYR TYR A . n A 1 100 SER 100 100 100 SER SER A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 ASP 102 102 102 ASP ASP A . n A 1 103 GLU 103 103 103 GLU GLU A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 ARG 105 105 105 ARG ARG A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 PHE 107 107 107 PHE PHE A . n A 1 108 VAL 108 108 108 VAL VAL A . n A 1 109 ARG 109 109 109 ARG ARG A . n A 1 110 THR 110 110 110 THR THR A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 ALA 113 113 113 ALA ALA A . n A 1 114 ALA 114 114 114 ALA ALA A . n A 1 115 LEU 115 115 115 LEU LEU A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 ALA 117 117 117 ALA ALA A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 PRO 119 119 119 PRO PRO A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 LEU 121 121 121 LEU LEU A . n A 1 122 ILE 122 122 122 ILE ILE A . n A 1 123 ASP 123 123 123 ASP ASP A . n A 1 124 ALA 124 124 124 ALA ALA A . n A 1 125 ILE 125 125 125 ILE ILE A . n A 1 126 ASP 126 126 126 ASP ASP A . n A 1 127 GLN 127 127 127 GLN GLN A . n A 1 128 LEU 128 128 128 LEU LEU A . n A 1 129 ARG 129 129 129 ARG ARG A . n A 1 130 PRO 130 130 130 PRO PRO A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 TYR 132 132 132 TYR TYR A . n B 1 1 ALA 1 1 1 ALA ALA B . n B 1 2 LYS 2 2 2 LYS LYS B . n B 1 3 LEU 3 3 3 LEU LEU B . n B 1 4 GLU 4 4 4 GLU GLU B . n B 1 5 THR 5 5 5 THR THR B . n B 1 6 VAL 6 6 6 VAL VAL B . n B 1 7 THR 7 7 7 THR THR B . n B 1 8 LEU 8 8 8 LEU LEU B . n B 1 9 GLY 9 9 9 GLY GLY B . n B 1 10 ASN 10 10 10 ASN ASN B . n B 1 11 ILE 11 11 11 ILE ILE B . n B 1 12 GLY 12 12 12 GLY GLY B . n B 1 13 LYS 13 13 13 LYS LYS B . n B 1 14 ASP 14 14 14 ASP ASP B . n B 1 15 GLY 15 15 15 GLY GLY B . n B 1 16 LYS 16 16 16 LYS LYS B . n B 1 17 GLN 17 17 17 GLN GLN B . n B 1 18 THR 18 18 18 THR THR B . n B 1 19 LEU 19 19 19 LEU LEU B . n B 1 20 VAL 20 20 20 VAL VAL B . n B 1 21 LEU 21 21 21 LEU LEU B . n B 1 22 ASN 22 22 22 ASN ASN B . n B 1 23 PRO 23 23 23 PRO PRO B . n B 1 24 ARG 24 24 24 ARG ARG B . n B 1 25 GLY 25 25 25 GLY GLY B . n B 1 26 VAL 26 26 26 VAL VAL B . n B 1 27 ASN 27 27 27 ASN ASN B . n B 1 28 PRO 28 28 28 PRO PRO B . n B 1 29 THR 29 29 29 THR THR B . n B 1 30 ASN 30 30 30 ASN ASN B . n B 1 31 GLY 31 31 31 GLY GLY B . n B 1 32 VAL 32 32 32 VAL VAL B . n B 1 33 ALA 33 33 33 ALA ALA B . n B 1 34 SER 34 34 34 SER SER B . n B 1 35 LEU 35 35 35 LEU LEU B . n B 1 36 SER 36 36 36 SER SER B . n B 1 37 GLN 37 37 37 GLN GLN B . n B 1 38 ALA 38 38 38 ALA ALA B . n B 1 39 GLY 39 39 39 GLY GLY B . n B 1 40 ALA 40 40 40 ALA ALA B . n B 1 41 VAL 41 41 41 VAL VAL B . n B 1 42 ARG 42 42 42 ARG ARG B . n B 1 43 ALA 43 43 43 ALA ALA B . n B 1 44 LEU 44 44 44 LEU LEU B . n B 1 45 GLU 45 45 45 GLU GLU B . n B 1 46 LYS 46 46 46 LYS LYS B . n B 1 47 ARG 47 47 47 ARG ARG B . n B 1 48 VAL 48 48 48 VAL VAL B . n B 1 49 THR 49 49 49 THR THR B . n B 1 50 VAL 50 50 50 VAL VAL B . n B 1 51 SER 51 51 51 SER SER B . n B 1 52 VAL 52 52 52 VAL VAL B . n B 1 53 SER 53 53 53 SER SER B . n B 1 54 GLN 54 54 54 GLN GLN B . n B 1 55 PRO 55 55 55 PRO PRO B . n B 1 56 SER 56 56 56 SER SER B . n B 1 57 ARG 57 57 57 ARG ARG B . n B 1 58 ASN 58 58 58 ASN ASN B . n B 1 59 ARG 59 59 59 ARG ARG B . n B 1 60 LYS 60 60 60 LYS LYS B . n B 1 61 ASN 61 61 61 ASN ASN B . n B 1 62 TYR 62 62 62 TYR TYR B . n B 1 63 LYS 63 63 63 LYS LYS B . n B 1 64 VAL 64 64 64 VAL VAL B . n B 1 65 GLN 65 65 65 GLN GLN B . n B 1 66 VAL 66 66 66 VAL VAL B . n B 1 67 LYS 67 67 67 LYS LYS B . n B 1 68 ILE 68 68 68 ILE ILE B . n B 1 69 GLN 69 69 69 GLN GLN B . n B 1 70 ASN 70 70 70 ASN ASN B . n B 1 71 PRO 71 71 71 PRO PRO B . n B 1 72 THR 72 72 72 THR THR B . n B 1 73 ALA 73 73 73 ALA ALA B . n B 1 74 GLY 74 74 74 GLY GLY B . n B 1 75 THR 75 75 ? ? ? B . n B 1 76 ALA 76 76 ? ? ? B . n B 1 77 ASN 77 77 ? ? ? B . n B 1 78 GLY 78 78 ? ? ? B . n B 1 79 SER 79 79 ? ? ? B . n B 1 80 GLY 80 80 ? ? ? B . n B 1 81 ASP 81 81 ? ? ? B . n B 1 82 PRO 82 82 ? ? ? B . n B 1 83 SER 83 83 ? ? ? B . n B 1 84 VAL 84 84 84 VAL VAL B . n B 1 85 THR 85 85 85 THR THR B . n B 1 86 ARG 86 86 86 ARG ARG B . n B 1 87 GLN 87 87 87 GLN GLN B . n B 1 88 ALA 88 88 88 ALA ALA B . n B 1 89 TYR 89 89 89 TYR TYR B . n B 1 90 ALA 90 90 90 ALA ALA B . n B 1 91 ASP 91 91 91 ASP ASP B . n B 1 92 VAL 92 92 92 VAL VAL B . n B 1 93 THR 93 93 93 THR THR B . n B 1 94 PHE 94 94 94 PHE PHE B . n B 1 95 SER 95 95 95 SER SER B . n B 1 96 PHE 96 96 96 PHE PHE B . n B 1 97 THR 97 97 97 THR THR B . n B 1 98 GLN 98 98 98 GLN GLN B . n B 1 99 TYR 99 99 99 TYR TYR B . n B 1 100 SER 100 100 100 SER SER B . n B 1 101 THR 101 101 101 THR THR B . n B 1 102 ASP 102 102 102 ASP ASP B . n B 1 103 GLU 103 103 103 GLU GLU B . n B 1 104 GLU 104 104 104 GLU GLU B . n B 1 105 ARG 105 105 105 ARG ARG B . n B 1 106 ALA 106 106 106 ALA ALA B . n B 1 107 PHE 107 107 107 PHE PHE B . n B 1 108 VAL 108 108 108 VAL VAL B . n B 1 109 ARG 109 109 109 ARG ARG B . n B 1 110 THR 110 110 110 THR THR B . n B 1 111 GLU 111 111 111 GLU GLU B . n B 1 112 LEU 112 112 112 LEU LEU B . n B 1 113 ALA 113 113 113 ALA ALA B . n B 1 114 ALA 114 114 114 ALA ALA B . n B 1 115 LEU 115 115 115 LEU LEU B . n B 1 116 LEU 116 116 116 LEU LEU B . n B 1 117 ALA 117 117 117 ALA ALA B . n B 1 118 SER 118 118 118 SER SER B . n B 1 119 PRO 119 119 119 PRO PRO B . n B 1 120 LEU 120 120 120 LEU LEU B . n B 1 121 LEU 121 121 121 LEU LEU B . n B 1 122 ILE 122 122 122 ILE ILE B . n B 1 123 ASP 123 123 123 ASP ASP B . n B 1 124 ALA 124 124 124 ALA ALA B . n B 1 125 ILE 125 125 125 ILE ILE B . n B 1 126 ASP 126 126 126 ASP ASP B . n B 1 127 GLN 127 127 127 GLN GLN B . n B 1 128 LEU 128 128 128 LEU LEU B . n B 1 129 ARG 129 129 129 ARG ARG B . n B 1 130 PRO 130 130 130 PRO PRO B . n B 1 131 ALA 131 131 131 ALA ALA B . n B 1 132 TYR 132 132 132 TYR TYR B . n C 2 1 A 1 1 1 A A R . n C 2 2 U 2 2 2 U U R . n C 2 3 G 3 3 3 G G R . n C 2 4 C 4 4 4 C C R . n C 2 5 A 5 5 5 A A R . n C 2 6 U 6 6 6 U U R . n C 2 7 G 7 7 7 G G R . n C 2 8 U 8 8 8 U U R . n C 2 9 C 9 9 9 C C R . n C 2 10 U 10 10 10 U U R . n C 2 11 A 11 11 11 A A R . n C 2 12 A 12 12 12 A A R . n C 2 13 G 13 13 13 G G R . n C 2 14 A 14 14 14 A A R . n C 2 15 C 15 15 15 C C R . n C 2 16 A 16 16 16 A A R . n C 2 17 G 17 17 17 G G R . n C 2 18 C 18 18 18 C C R . n C 2 19 A 19 19 19 A A R . n C 2 20 U 20 20 20 U U R . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 ZN 1 201 1 ZN ZN B . E 3 ZN 1 101 2 ZN ZN R . F 3 ZN 1 102 3 ZN ZN R . G 3 ZN 1 103 4 ZN ZN R . H 3 ZN 1 104 5 ZN ZN R . I 3 ZN 1 105 6 ZN ZN R . J 4 HOH 1 201 4 HOH HOH A . J 4 HOH 2 202 5 HOH HOH A . J 4 HOH 3 203 8 HOH HOH A . J 4 HOH 4 204 12 HOH HOH A . J 4 HOH 5 205 13 HOH HOH A . J 4 HOH 6 206 15 HOH HOH A . J 4 HOH 7 207 20 HOH HOH A . J 4 HOH 8 208 24 HOH HOH A . J 4 HOH 9 209 31 HOH HOH A . J 4 HOH 10 210 32 HOH HOH A . J 4 HOH 11 211 36 HOH HOH A . J 4 HOH 12 212 38 HOH HOH A . J 4 HOH 13 213 40 HOH HOH A . J 4 HOH 14 214 42 HOH HOH A . J 4 HOH 15 215 48 HOH HOH A . J 4 HOH 16 216 53 HOH HOH A . J 4 HOH 17 217 54 HOH HOH A . J 4 HOH 18 218 55 HOH HOH A . J 4 HOH 19 219 56 HOH HOH A . J 4 HOH 20 220 57 HOH HOH A . J 4 HOH 21 221 60 HOH HOH A . J 4 HOH 22 222 61 HOH HOH A . J 4 HOH 23 223 62 HOH HOH A . J 4 HOH 24 224 65 HOH HOH A . J 4 HOH 25 225 66 HOH HOH A . J 4 HOH 26 226 67 HOH HOH A . J 4 HOH 27 227 70 HOH HOH A . J 4 HOH 28 228 71 HOH HOH A . J 4 HOH 29 229 74 HOH HOH A . J 4 HOH 30 230 75 HOH HOH A . J 4 HOH 31 231 79 HOH HOH A . J 4 HOH 32 232 82 HOH HOH A . J 4 HOH 33 233 86 HOH HOH A . J 4 HOH 34 234 87 HOH HOH A . J 4 HOH 35 235 91 HOH HOH A . K 4 HOH 1 301 2 HOH HOH B . K 4 HOH 2 302 3 HOH HOH B . K 4 HOH 3 303 6 HOH HOH B . K 4 HOH 4 304 7 HOH HOH B . K 4 HOH 5 305 9 HOH HOH B . K 4 HOH 6 306 10 HOH HOH B . K 4 HOH 7 307 11 HOH HOH B . K 4 HOH 8 308 14 HOH HOH B . K 4 HOH 9 309 16 HOH HOH B . K 4 HOH 10 310 17 HOH HOH B . K 4 HOH 11 311 18 HOH HOH B . K 4 HOH 12 312 19 HOH HOH B . K 4 HOH 13 313 21 HOH HOH B . K 4 HOH 14 314 22 HOH HOH B . K 4 HOH 15 315 23 HOH HOH B . K 4 HOH 16 316 25 HOH HOH B . K 4 HOH 17 317 26 HOH HOH B . K 4 HOH 18 318 27 HOH HOH B . K 4 HOH 19 319 28 HOH HOH B . K 4 HOH 20 320 29 HOH HOH B . K 4 HOH 21 321 30 HOH HOH B . K 4 HOH 22 322 33 HOH HOH B . K 4 HOH 23 323 34 HOH HOH B . K 4 HOH 24 324 35 HOH HOH B . K 4 HOH 25 325 37 HOH HOH B . K 4 HOH 26 326 39 HOH HOH B . K 4 HOH 27 327 41 HOH HOH B . K 4 HOH 28 328 43 HOH HOH B . K 4 HOH 29 329 44 HOH HOH B . K 4 HOH 30 330 45 HOH HOH B . K 4 HOH 31 331 46 HOH HOH B . K 4 HOH 32 332 49 HOH HOH B . K 4 HOH 33 333 50 HOH HOH B . K 4 HOH 34 334 51 HOH HOH B . K 4 HOH 35 335 52 HOH HOH B . K 4 HOH 36 336 58 HOH HOH B . K 4 HOH 37 337 59 HOH HOH B . K 4 HOH 38 338 64 HOH HOH B . K 4 HOH 39 339 69 HOH HOH B . K 4 HOH 40 340 72 HOH HOH B . K 4 HOH 41 341 76 HOH HOH B . K 4 HOH 42 342 77 HOH HOH B . K 4 HOH 43 343 78 HOH HOH B . K 4 HOH 44 344 81 HOH HOH B . K 4 HOH 45 345 83 HOH HOH B . K 4 HOH 46 346 84 HOH HOH B . K 4 HOH 47 347 85 HOH HOH B . K 4 HOH 48 348 88 HOH HOH B . K 4 HOH 49 349 89 HOH HOH B . K 4 HOH 50 350 90 HOH HOH B . K 4 HOH 51 351 93 HOH HOH B . L 4 HOH 1 201 1 HOH HOH R . L 4 HOH 2 202 73 HOH HOH R . L 4 HOH 3 203 80 HOH HOH R . L 4 HOH 4 204 92 HOH HOH R . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 9410 ? 1 MORE -213 ? 1 'SSA (A^2)' 14290 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 91 ? A ASP 91 ? 1_555 ZN ? I ZN . ? R ZN 105 ? 1_555 O ? J HOH . ? A HOH 201 ? 1_555 80.1 ? 2 OD2 ? A ASP 91 ? A ASP 91 ? 1_555 ZN ? I ZN . ? R ZN 105 ? 1_555 N1 ? C A 11 ? R A 11 ? 1_555 79.4 ? 3 O ? J HOH . ? A HOH 201 ? 1_555 ZN ? I ZN . ? R ZN 105 ? 1_555 N1 ? C A 11 ? R A 11 ? 1_555 109.6 ? 4 OD2 ? A ASP 91 ? A ASP 91 ? 1_555 ZN ? I ZN . ? R ZN 105 ? 1_555 O ? L HOH . ? R HOH 201 ? 1_555 149.3 ? 5 O ? J HOH . ? A HOH 201 ? 1_555 ZN ? I ZN . ? R ZN 105 ? 1_555 O ? L HOH . ? R HOH 201 ? 1_555 115.8 ? 6 N1 ? C A 11 ? R A 11 ? 1_555 ZN ? I ZN . ? R ZN 105 ? 1_555 O ? L HOH . ? R HOH 201 ? 1_555 115.5 ? 7 O ? J HOH . ? A HOH 229 ? 1_555 ZN ? F ZN . ? R ZN 102 ? 1_555 N7 ? C G 13 ? R G 13 ? 1_555 150.7 ? 8 O ? J HOH . ? A HOH 229 ? 1_555 ZN ? F ZN . ? R ZN 102 ? 1_555 O ? L HOH . ? R HOH 202 ? 1_555 109.2 ? 9 N7 ? C G 13 ? R G 13 ? 1_555 ZN ? F ZN . ? R ZN 102 ? 1_555 O ? L HOH . ? R HOH 202 ? 1_555 99.9 ? 10 OD1 ? B ASP 102 ? B ASP 102 ? 1_555 ZN ? D ZN . ? B ZN 201 ? 1_555 OE2 ? B GLU 103 ? B GLU 103 ? 1_555 109.1 ? 11 OD1 ? B ASP 102 ? B ASP 102 ? 1_555 ZN ? D ZN . ? B ZN 201 ? 1_555 OE1 ? B GLU 103 ? B GLU 103 ? 1_555 75.0 ? 12 OE2 ? B GLU 103 ? B GLU 103 ? 1_555 ZN ? D ZN . ? B ZN 201 ? 1_555 OE1 ? B GLU 103 ? B GLU 103 ? 1_555 56.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-10-02 2 'Structure model' 1 1 2014-03-05 3 'Structure model' 1 2 2017-11-15 4 'Structure model' 1 3 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' diffrn_source 2 3 'Structure model' software 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' database_2 6 4 'Structure model' pdbx_initial_refinement_model 7 4 'Structure model' pdbx_struct_conn_angle 8 4 'Structure model' struct_conn 9 4 'Structure model' struct_ref_seq_dif 10 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_database_2.pdbx_DOI' 4 4 'Structure model' '_database_2.pdbx_database_accession' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.value' 23 4 'Structure model' '_struct_conn.pdbx_dist_value' 24 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 25 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 26 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 29 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 30 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 31 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 32 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 33 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 34 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 35 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 36 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 37 4 'Structure model' '_struct_ref_seq_dif.details' 38 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 39 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 40 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345 'data collection' . ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.5.0110 ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 "O5'" _pdbx_validate_rmsd_bond.auth_asym_id_1 R _pdbx_validate_rmsd_bond.auth_comp_id_1 U _pdbx_validate_rmsd_bond.auth_seq_id_1 10 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 "C5'" _pdbx_validate_rmsd_bond.auth_asym_id_2 R _pdbx_validate_rmsd_bond.auth_comp_id_2 U _pdbx_validate_rmsd_bond.auth_seq_id_2 10 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.359 _pdbx_validate_rmsd_bond.bond_target_value 1.420 _pdbx_validate_rmsd_bond.bond_deviation -0.061 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.009 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE B ARG 105 ? ? CZ B ARG 105 ? ? NH2 B ARG 105 ? ? 116.39 120.30 -3.91 0.50 N 2 1 "O4'" R A 5 ? ? "C1'" R A 5 ? ? N9 R A 5 ? ? 113.02 108.50 4.52 0.70 N 3 1 C5 R A 5 ? ? C6 R A 5 ? ? N1 R A 5 ? ? 120.74 117.70 3.04 0.50 N 4 1 "O4'" R C 9 ? ? "C1'" R C 9 ? ? N1 R C 9 ? ? 113.86 108.50 5.36 0.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 2 ? ? -38.18 121.60 2 1 ILE B 125 ? ? -94.13 -62.96 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 42 ? CG ? A ARG 42 CG 2 1 Y 1 A ARG 42 ? CD ? A ARG 42 CD 3 1 Y 1 A ARG 42 ? NE ? A ARG 42 NE 4 1 Y 1 A ARG 42 ? CZ ? A ARG 42 CZ 5 1 Y 1 A ARG 42 ? NH1 ? A ARG 42 NH1 6 1 Y 1 A ARG 42 ? NH2 ? A ARG 42 NH2 7 1 Y 1 A LYS 60 ? CG ? A LYS 60 CG 8 1 Y 1 A LYS 60 ? CD ? A LYS 60 CD 9 1 Y 1 A LYS 60 ? CE ? A LYS 60 CE 10 1 Y 1 A LYS 60 ? NZ ? A LYS 60 NZ 11 1 Y 1 B ARG 57 ? CG ? B ARG 57 CG 12 1 Y 1 B ARG 57 ? CD ? B ARG 57 CD 13 1 Y 1 B ARG 57 ? NE ? B ARG 57 NE 14 1 Y 1 B ARG 57 ? CZ ? B ARG 57 CZ 15 1 Y 1 B ARG 57 ? NH1 ? B ARG 57 NH1 16 1 Y 1 B ARG 57 ? NH2 ? B ARG 57 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 74 ? A GLY 74 2 1 Y 1 A THR 75 ? A THR 75 3 1 Y 1 A ALA 76 ? A ALA 76 4 1 Y 1 A ASN 77 ? A ASN 77 5 1 Y 1 A GLY 78 ? A GLY 78 6 1 Y 1 A SER 79 ? A SER 79 7 1 Y 1 A GLY 80 ? A GLY 80 8 1 Y 1 A ASP 81 ? A ASP 81 9 1 Y 1 A PRO 82 ? A PRO 82 10 1 Y 1 A SER 83 ? A SER 83 11 1 Y 1 A VAL 84 ? A VAL 84 12 1 Y 1 B THR 75 ? B THR 75 13 1 Y 1 B ALA 76 ? B ALA 76 14 1 Y 1 B ASN 77 ? B ASN 77 15 1 Y 1 B GLY 78 ? B GLY 78 16 1 Y 1 B SER 79 ? B SER 79 17 1 Y 1 B GLY 80 ? B GLY 80 18 1 Y 1 B ASP 81 ? B ASP 81 19 1 Y 1 B PRO 82 ? B PRO 82 20 1 Y 1 B SER 83 ? B SER 83 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 G OP3 O N N 160 G P P N N 161 G OP1 O N N 162 G OP2 O N N 163 G "O5'" O N N 164 G "C5'" C N N 165 G "C4'" C N R 166 G "O4'" O N N 167 G "C3'" C N S 168 G "O3'" O N N 169 G "C2'" C N R 170 G "O2'" O N N 171 G "C1'" C N R 172 G N9 N Y N 173 G C8 C Y N 174 G N7 N Y N 175 G C5 C Y N 176 G C6 C N N 177 G O6 O N N 178 G N1 N N N 179 G C2 C N N 180 G N2 N N N 181 G N3 N N N 182 G C4 C Y N 183 G HOP3 H N N 184 G HOP2 H N N 185 G "H5'" H N N 186 G "H5''" H N N 187 G "H4'" H N N 188 G "H3'" H N N 189 G "HO3'" H N N 190 G "H2'" H N N 191 G "HO2'" H N N 192 G "H1'" H N N 193 G H8 H N N 194 G H1 H N N 195 G H21 H N N 196 G H22 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 HOH O O N N 247 HOH H1 H N N 248 HOH H2 H N N 249 ILE N N N N 250 ILE CA C N S 251 ILE C C N N 252 ILE O O N N 253 ILE CB C N S 254 ILE CG1 C N N 255 ILE CG2 C N N 256 ILE CD1 C N N 257 ILE OXT O N N 258 ILE H H N N 259 ILE H2 H N N 260 ILE HA H N N 261 ILE HB H N N 262 ILE HG12 H N N 263 ILE HG13 H N N 264 ILE HG21 H N N 265 ILE HG22 H N N 266 ILE HG23 H N N 267 ILE HD11 H N N 268 ILE HD12 H N N 269 ILE HD13 H N N 270 ILE HXT H N N 271 LEU N N N N 272 LEU CA C N S 273 LEU C C N N 274 LEU O O N N 275 LEU CB C N N 276 LEU CG C N N 277 LEU CD1 C N N 278 LEU CD2 C N N 279 LEU OXT O N N 280 LEU H H N N 281 LEU H2 H N N 282 LEU HA H N N 283 LEU HB2 H N N 284 LEU HB3 H N N 285 LEU HG H N N 286 LEU HD11 H N N 287 LEU HD12 H N N 288 LEU HD13 H N N 289 LEU HD21 H N N 290 LEU HD22 H N N 291 LEU HD23 H N N 292 LEU HXT H N N 293 LYS N N N N 294 LYS CA C N S 295 LYS C C N N 296 LYS O O N N 297 LYS CB C N N 298 LYS CG C N N 299 LYS CD C N N 300 LYS CE C N N 301 LYS NZ N N N 302 LYS OXT O N N 303 LYS H H N N 304 LYS H2 H N N 305 LYS HA H N N 306 LYS HB2 H N N 307 LYS HB3 H N N 308 LYS HG2 H N N 309 LYS HG3 H N N 310 LYS HD2 H N N 311 LYS HD3 H N N 312 LYS HE2 H N N 313 LYS HE3 H N N 314 LYS HZ1 H N N 315 LYS HZ2 H N N 316 LYS HZ3 H N N 317 LYS HXT H N N 318 PHE N N N N 319 PHE CA C N S 320 PHE C C N N 321 PHE O O N N 322 PHE CB C N N 323 PHE CG C Y N 324 PHE CD1 C Y N 325 PHE CD2 C Y N 326 PHE CE1 C Y N 327 PHE CE2 C Y N 328 PHE CZ C Y N 329 PHE OXT O N N 330 PHE H H N N 331 PHE H2 H N N 332 PHE HA H N N 333 PHE HB2 H N N 334 PHE HB3 H N N 335 PHE HD1 H N N 336 PHE HD2 H N N 337 PHE HE1 H N N 338 PHE HE2 H N N 339 PHE HZ H N N 340 PHE HXT H N N 341 PRO N N N N 342 PRO CA C N S 343 PRO C C N N 344 PRO O O N N 345 PRO CB C N N 346 PRO CG C N N 347 PRO CD C N N 348 PRO OXT O N N 349 PRO H H N N 350 PRO HA H N N 351 PRO HB2 H N N 352 PRO HB3 H N N 353 PRO HG2 H N N 354 PRO HG3 H N N 355 PRO HD2 H N N 356 PRO HD3 H N N 357 PRO HXT H N N 358 SER N N N N 359 SER CA C N S 360 SER C C N N 361 SER O O N N 362 SER CB C N N 363 SER OG O N N 364 SER OXT O N N 365 SER H H N N 366 SER H2 H N N 367 SER HA H N N 368 SER HB2 H N N 369 SER HB3 H N N 370 SER HG H N N 371 SER HXT H N N 372 THR N N N N 373 THR CA C N S 374 THR C C N N 375 THR O O N N 376 THR CB C N R 377 THR OG1 O N N 378 THR CG2 C N N 379 THR OXT O N N 380 THR H H N N 381 THR H2 H N N 382 THR HA H N N 383 THR HB H N N 384 THR HG1 H N N 385 THR HG21 H N N 386 THR HG22 H N N 387 THR HG23 H N N 388 THR HXT H N N 389 TYR N N N N 390 TYR CA C N S 391 TYR C C N N 392 TYR O O N N 393 TYR CB C N N 394 TYR CG C Y N 395 TYR CD1 C Y N 396 TYR CD2 C Y N 397 TYR CE1 C Y N 398 TYR CE2 C Y N 399 TYR CZ C Y N 400 TYR OH O N N 401 TYR OXT O N N 402 TYR H H N N 403 TYR H2 H N N 404 TYR HA H N N 405 TYR HB2 H N N 406 TYR HB3 H N N 407 TYR HD1 H N N 408 TYR HD2 H N N 409 TYR HE1 H N N 410 TYR HE2 H N N 411 TYR HH H N N 412 TYR HXT H N N 413 U OP3 O N N 414 U P P N N 415 U OP1 O N N 416 U OP2 O N N 417 U "O5'" O N N 418 U "C5'" C N N 419 U "C4'" C N R 420 U "O4'" O N N 421 U "C3'" C N S 422 U "O3'" O N N 423 U "C2'" C N R 424 U "O2'" O N N 425 U "C1'" C N R 426 U N1 N N N 427 U C2 C N N 428 U O2 O N N 429 U N3 N N N 430 U C4 C N N 431 U O4 O N N 432 U C5 C N N 433 U C6 C N N 434 U HOP3 H N N 435 U HOP2 H N N 436 U "H5'" H N N 437 U "H5''" H N N 438 U "H4'" H N N 439 U "H3'" H N N 440 U "HO3'" H N N 441 U "H2'" H N N 442 U "HO2'" H N N 443 U "H1'" H N N 444 U H3 H N N 445 U H5 H N N 446 U H6 H N N 447 VAL N N N N 448 VAL CA C N S 449 VAL C C N N 450 VAL O O N N 451 VAL CB C N N 452 VAL CG1 C N N 453 VAL CG2 C N N 454 VAL OXT O N N 455 VAL H H N N 456 VAL H2 H N N 457 VAL HA H N N 458 VAL HB H N N 459 VAL HG11 H N N 460 VAL HG12 H N N 461 VAL HG13 H N N 462 VAL HG21 H N N 463 VAL HG22 H N N 464 VAL HG23 H N N 465 VAL HXT H N N 466 ZN ZN ZN N N 467 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 G OP3 P sing N N 158 G OP3 HOP3 sing N N 159 G P OP1 doub N N 160 G P OP2 sing N N 161 G P "O5'" sing N N 162 G OP2 HOP2 sing N N 163 G "O5'" "C5'" sing N N 164 G "C5'" "C4'" sing N N 165 G "C5'" "H5'" sing N N 166 G "C5'" "H5''" sing N N 167 G "C4'" "O4'" sing N N 168 G "C4'" "C3'" sing N N 169 G "C4'" "H4'" sing N N 170 G "O4'" "C1'" sing N N 171 G "C3'" "O3'" sing N N 172 G "C3'" "C2'" sing N N 173 G "C3'" "H3'" sing N N 174 G "O3'" "HO3'" sing N N 175 G "C2'" "O2'" sing N N 176 G "C2'" "C1'" sing N N 177 G "C2'" "H2'" sing N N 178 G "O2'" "HO2'" sing N N 179 G "C1'" N9 sing N N 180 G "C1'" "H1'" sing N N 181 G N9 C8 sing Y N 182 G N9 C4 sing Y N 183 G C8 N7 doub Y N 184 G C8 H8 sing N N 185 G N7 C5 sing Y N 186 G C5 C6 sing N N 187 G C5 C4 doub Y N 188 G C6 O6 doub N N 189 G C6 N1 sing N N 190 G N1 C2 sing N N 191 G N1 H1 sing N N 192 G C2 N2 sing N N 193 G C2 N3 doub N N 194 G N2 H21 sing N N 195 G N2 H22 sing N N 196 G N3 C4 sing N N 197 GLN N CA sing N N 198 GLN N H sing N N 199 GLN N H2 sing N N 200 GLN CA C sing N N 201 GLN CA CB sing N N 202 GLN CA HA sing N N 203 GLN C O doub N N 204 GLN C OXT sing N N 205 GLN CB CG sing N N 206 GLN CB HB2 sing N N 207 GLN CB HB3 sing N N 208 GLN CG CD sing N N 209 GLN CG HG2 sing N N 210 GLN CG HG3 sing N N 211 GLN CD OE1 doub N N 212 GLN CD NE2 sing N N 213 GLN NE2 HE21 sing N N 214 GLN NE2 HE22 sing N N 215 GLN OXT HXT sing N N 216 GLU N CA sing N N 217 GLU N H sing N N 218 GLU N H2 sing N N 219 GLU CA C sing N N 220 GLU CA CB sing N N 221 GLU CA HA sing N N 222 GLU C O doub N N 223 GLU C OXT sing N N 224 GLU CB CG sing N N 225 GLU CB HB2 sing N N 226 GLU CB HB3 sing N N 227 GLU CG CD sing N N 228 GLU CG HG2 sing N N 229 GLU CG HG3 sing N N 230 GLU CD OE1 doub N N 231 GLU CD OE2 sing N N 232 GLU OE2 HE2 sing N N 233 GLU OXT HXT sing N N 234 GLY N CA sing N N 235 GLY N H sing N N 236 GLY N H2 sing N N 237 GLY CA C sing N N 238 GLY CA HA2 sing N N 239 GLY CA HA3 sing N N 240 GLY C O doub N N 241 GLY C OXT sing N N 242 GLY OXT HXT sing N N 243 HOH O H1 sing N N 244 HOH O H2 sing N N 245 ILE N CA sing N N 246 ILE N H sing N N 247 ILE N H2 sing N N 248 ILE CA C sing N N 249 ILE CA CB sing N N 250 ILE CA HA sing N N 251 ILE C O doub N N 252 ILE C OXT sing N N 253 ILE CB CG1 sing N N 254 ILE CB CG2 sing N N 255 ILE CB HB sing N N 256 ILE CG1 CD1 sing N N 257 ILE CG1 HG12 sing N N 258 ILE CG1 HG13 sing N N 259 ILE CG2 HG21 sing N N 260 ILE CG2 HG22 sing N N 261 ILE CG2 HG23 sing N N 262 ILE CD1 HD11 sing N N 263 ILE CD1 HD12 sing N N 264 ILE CD1 HD13 sing N N 265 ILE OXT HXT sing N N 266 LEU N CA sing N N 267 LEU N H sing N N 268 LEU N H2 sing N N 269 LEU CA C sing N N 270 LEU CA CB sing N N 271 LEU CA HA sing N N 272 LEU C O doub N N 273 LEU C OXT sing N N 274 LEU CB CG sing N N 275 LEU CB HB2 sing N N 276 LEU CB HB3 sing N N 277 LEU CG CD1 sing N N 278 LEU CG CD2 sing N N 279 LEU CG HG sing N N 280 LEU CD1 HD11 sing N N 281 LEU CD1 HD12 sing N N 282 LEU CD1 HD13 sing N N 283 LEU CD2 HD21 sing N N 284 LEU CD2 HD22 sing N N 285 LEU CD2 HD23 sing N N 286 LEU OXT HXT sing N N 287 LYS N CA sing N N 288 LYS N H sing N N 289 LYS N H2 sing N N 290 LYS CA C sing N N 291 LYS CA CB sing N N 292 LYS CA HA sing N N 293 LYS C O doub N N 294 LYS C OXT sing N N 295 LYS CB CG sing N N 296 LYS CB HB2 sing N N 297 LYS CB HB3 sing N N 298 LYS CG CD sing N N 299 LYS CG HG2 sing N N 300 LYS CG HG3 sing N N 301 LYS CD CE sing N N 302 LYS CD HD2 sing N N 303 LYS CD HD3 sing N N 304 LYS CE NZ sing N N 305 LYS CE HE2 sing N N 306 LYS CE HE3 sing N N 307 LYS NZ HZ1 sing N N 308 LYS NZ HZ2 sing N N 309 LYS NZ HZ3 sing N N 310 LYS OXT HXT sing N N 311 PHE N CA sing N N 312 PHE N H sing N N 313 PHE N H2 sing N N 314 PHE CA C sing N N 315 PHE CA CB sing N N 316 PHE CA HA sing N N 317 PHE C O doub N N 318 PHE C OXT sing N N 319 PHE CB CG sing N N 320 PHE CB HB2 sing N N 321 PHE CB HB3 sing N N 322 PHE CG CD1 doub Y N 323 PHE CG CD2 sing Y N 324 PHE CD1 CE1 sing Y N 325 PHE CD1 HD1 sing N N 326 PHE CD2 CE2 doub Y N 327 PHE CD2 HD2 sing N N 328 PHE CE1 CZ doub Y N 329 PHE CE1 HE1 sing N N 330 PHE CE2 CZ sing Y N 331 PHE CE2 HE2 sing N N 332 PHE CZ HZ sing N N 333 PHE OXT HXT sing N N 334 PRO N CA sing N N 335 PRO N CD sing N N 336 PRO N H sing N N 337 PRO CA C sing N N 338 PRO CA CB sing N N 339 PRO CA HA sing N N 340 PRO C O doub N N 341 PRO C OXT sing N N 342 PRO CB CG sing N N 343 PRO CB HB2 sing N N 344 PRO CB HB3 sing N N 345 PRO CG CD sing N N 346 PRO CG HG2 sing N N 347 PRO CG HG3 sing N N 348 PRO CD HD2 sing N N 349 PRO CD HD3 sing N N 350 PRO OXT HXT sing N N 351 SER N CA sing N N 352 SER N H sing N N 353 SER N H2 sing N N 354 SER CA C sing N N 355 SER CA CB sing N N 356 SER CA HA sing N N 357 SER C O doub N N 358 SER C OXT sing N N 359 SER CB OG sing N N 360 SER CB HB2 sing N N 361 SER CB HB3 sing N N 362 SER OG HG sing N N 363 SER OXT HXT sing N N 364 THR N CA sing N N 365 THR N H sing N N 366 THR N H2 sing N N 367 THR CA C sing N N 368 THR CA CB sing N N 369 THR CA HA sing N N 370 THR C O doub N N 371 THR C OXT sing N N 372 THR CB OG1 sing N N 373 THR CB CG2 sing N N 374 THR CB HB sing N N 375 THR OG1 HG1 sing N N 376 THR CG2 HG21 sing N N 377 THR CG2 HG22 sing N N 378 THR CG2 HG23 sing N N 379 THR OXT HXT sing N N 380 TYR N CA sing N N 381 TYR N H sing N N 382 TYR N H2 sing N N 383 TYR CA C sing N N 384 TYR CA CB sing N N 385 TYR CA HA sing N N 386 TYR C O doub N N 387 TYR C OXT sing N N 388 TYR CB CG sing N N 389 TYR CB HB2 sing N N 390 TYR CB HB3 sing N N 391 TYR CG CD1 doub Y N 392 TYR CG CD2 sing Y N 393 TYR CD1 CE1 sing Y N 394 TYR CD1 HD1 sing N N 395 TYR CD2 CE2 doub Y N 396 TYR CD2 HD2 sing N N 397 TYR CE1 CZ doub Y N 398 TYR CE1 HE1 sing N N 399 TYR CE2 CZ sing Y N 400 TYR CE2 HE2 sing N N 401 TYR CZ OH sing N N 402 TYR OH HH sing N N 403 TYR OXT HXT sing N N 404 U OP3 P sing N N 405 U OP3 HOP3 sing N N 406 U P OP1 doub N N 407 U P OP2 sing N N 408 U P "O5'" sing N N 409 U OP2 HOP2 sing N N 410 U "O5'" "C5'" sing N N 411 U "C5'" "C4'" sing N N 412 U "C5'" "H5'" sing N N 413 U "C5'" "H5''" sing N N 414 U "C4'" "O4'" sing N N 415 U "C4'" "C3'" sing N N 416 U "C4'" "H4'" sing N N 417 U "O4'" "C1'" sing N N 418 U "C3'" "O3'" sing N N 419 U "C3'" "C2'" sing N N 420 U "C3'" "H3'" sing N N 421 U "O3'" "HO3'" sing N N 422 U "C2'" "O2'" sing N N 423 U "C2'" "C1'" sing N N 424 U "C2'" "H2'" sing N N 425 U "O2'" "HO2'" sing N N 426 U "C1'" N1 sing N N 427 U "C1'" "H1'" sing N N 428 U N1 C2 sing N N 429 U N1 C6 sing N N 430 U C2 O2 doub N N 431 U C2 N3 sing N N 432 U N3 C4 sing N N 433 U N3 H3 sing N N 434 U C4 O4 doub N N 435 U C4 C5 sing N N 436 U C5 C6 doub N N 437 U C5 H5 sing N N 438 U C6 H6 sing N N 439 VAL N CA sing N N 440 VAL N H sing N N 441 VAL N H2 sing N N 442 VAL CA C sing N N 443 VAL CA CB sing N N 444 VAL CA HA sing N N 445 VAL C O doub N N 446 VAL C OXT sing N N 447 VAL CB CG1 sing N N 448 VAL CB CG2 sing N N 449 VAL CB HB sing N N 450 VAL CG1 HG11 sing N N 451 VAL CG1 HG12 sing N N 452 VAL CG1 HG13 sing N N 453 VAL CG2 HG21 sing N N 454 VAL CG2 HG22 sing N N 455 VAL CG2 HG23 sing N N 456 VAL OXT HXT sing N N 457 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4L8H 'double helix' 4L8H 'a-form double helix' 4L8H 'hairpin loop' 4L8H 'bulge loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C A 1 1_555 C U 20 1_555 -0.452 -0.048 0.102 0.575 -13.398 2.604 1 R_A1:U20_R R 1 ? R 20 ? 20 1 1 C U 2 1_555 C A 19 1_555 0.192 -0.546 -0.113 4.565 -12.337 -0.607 2 R_U2:A19_R R 2 ? R 19 ? 20 1 1 C G 3 1_555 C C 18 1_555 0.745 -0.351 0.324 -2.102 -11.096 -1.033 3 R_G3:C18_R R 3 ? R 18 ? 19 1 1 C C 4 1_555 C G 17 1_555 -0.212 0.326 0.248 0.936 -10.978 7.581 4 R_C4:G17_R R 4 ? R 17 ? ? 1 1 C U 6 1_555 C A 16 1_555 -0.329 -0.082 0.338 -11.606 0.581 3.187 5 R_U6:A16_R R 6 ? R 16 ? 20 1 1 C G 7 1_555 C C 15 1_555 -0.468 0.105 0.405 -4.201 -18.337 2.168 6 R_G7:C15_R R 7 ? R 15 ? 19 1 1 C U 8 1_555 C A 14 1_555 0.177 0.140 0.376 -5.071 -10.340 4.393 7 R_U8:A14_R R 8 ? R 14 ? 20 1 1 C C 9 1_555 C G 13 1_555 0.819 -0.362 0.453 -3.074 2.141 3.133 8 R_C9:G13_R R 9 ? R 13 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C A 1 1_555 C U 20 1_555 C U 2 1_555 C A 19 1_555 -0.290 -1.328 3.183 1.176 2.789 35.711 -2.541 0.633 3.063 4.538 -1.913 35.835 1 RR_A1U2:A19U20_RR R 1 ? R 20 ? R 2 ? R 19 ? 1 C U 2 1_555 C A 19 1_555 C G 3 1_555 C C 18 1_555 -0.118 -1.477 3.304 -2.581 8.951 34.231 -3.683 -0.169 2.842 14.869 4.287 35.440 2 RR_U2G3:C18A19_RR R 2 ? R 19 ? R 3 ? R 18 ? 1 C G 3 1_555 C C 18 1_555 C C 4 1_555 C G 17 1_555 0.298 -1.480 3.151 2.751 1.288 27.600 -3.381 0.014 3.095 2.690 -5.745 27.763 3 RR_G3C4:G17C18_RR R 3 ? R 18 ? R 4 ? R 17 ? 1 C C 4 1_555 C G 17 1_555 C U 6 1_555 C A 16 1_555 -1.893 -1.943 3.325 -3.574 8.775 41.991 -3.504 2.235 3.023 12.062 4.913 42.999 4 RR_C4U6:A16G17_RR R 4 ? R 17 ? R 6 ? R 16 ? 1 C U 6 1_555 C A 16 1_555 C G 7 1_555 C C 15 1_555 0.112 -2.027 3.023 3.623 0.904 31.556 -3.855 0.406 2.959 1.656 -6.633 31.770 5 RR_U6G7:C15A16_RR R 6 ? R 16 ? R 7 ? R 15 ? 1 C G 7 1_555 C C 15 1_555 C U 8 1_555 C A 14 1_555 -0.363 -1.869 3.211 -1.892 3.171 34.263 -3.628 0.331 3.046 5.363 3.200 34.455 6 RR_G7U8:A14C15_RR R 7 ? R 15 ? R 8 ? R 14 ? 1 C U 8 1_555 C A 14 1_555 C C 9 1_555 C G 13 1_555 0.157 -1.452 3.149 -0.258 5.730 32.739 -3.427 -0.315 2.860 10.069 0.454 33.224 7 RR_U8C9:G13A14_RR R 8 ? R 14 ? R 9 ? R 13 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1QBE _pdbx_initial_refinement_model.details 'PDB entry 1QBE' #