data_4L8I # _entry.id 4L8I # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4L8I RCSB RCSB080314 WWPDB D_1000080314 # _pdbx_database_status.entry_id 4L8I _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-06-17 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Jardine, J.' 1 'Correnti, C.' 2 'Holmes, M.A.' 3 'Strong, R.K.' 4 'Schief, W.R.' 5 # _citation.id primary _citation.title 'Proof of principle for epitope-focused vaccine design.' _citation.journal_abbrev Nature _citation.journal_volume 507 _citation.page_first 201 _citation.page_last 206 _citation.year 2014 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24499818 _citation.pdbx_database_id_DOI 10.1038/nature12966 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Correia, B.E.' 1 primary 'Bates, J.T.' 2 primary 'Loomis, R.J.' 3 primary 'Baneyx, G.' 4 primary 'Carrico, C.' 5 primary 'Jardine, J.G.' 6 primary 'Rupert, P.' 7 primary 'Correnti, C.' 8 primary 'Kalyuzhniy, O.' 9 primary 'Vittal, V.' 10 primary 'Connell, M.J.' 11 primary 'Stevens, E.' 12 primary 'Schroeter, A.' 13 primary 'Chen, M.' 14 primary 'Macpherson, S.' 15 primary 'Serra, A.M.' 16 primary 'Adachi, Y.' 17 primary 'Holmes, M.A.' 18 primary 'Li, Y.' 19 primary 'Klevit, R.E.' 20 primary 'Graham, B.S.' 21 primary 'Wyatt, R.T.' 22 primary 'Baker, D.' 23 primary 'Strong, R.K.' 24 primary 'Crowe, J.E.' 25 primary 'Johnson, P.R.' 26 primary 'Schief, W.R.' 27 # _cell.length_a 53.406 _cell.length_b 53.406 _cell.length_c 178.508 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 4L8I _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.entry_id 4L8I _symmetry.Int_Tables_number 152 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RSV epitope scaffold FFL_005' 13709.756 2 ? ? ? ? 2 water nat water 18.015 153 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSMSDIRKDLEERFDKLVEALKNKVDKMKAAFRMDQFHEERMKDWFKDLRKEVEQMRRAVRNYASEALSKINDLPITNDD KKLASNDVLKLVAEVWKKLEAILADVEAWFTHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;GSMSDIRKDLEERFDKLVEALKNKVDKMKAAFRMDQFHEERMKDWFKDLRKEVEQMRRAVRNYASEALSKINDLPITNDD KKLASNDVLKLVAEVWKKLEAILADVEAWFTHHHH ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 MET n 1 4 SER n 1 5 ASP n 1 6 ILE n 1 7 ARG n 1 8 LYS n 1 9 ASP n 1 10 LEU n 1 11 GLU n 1 12 GLU n 1 13 ARG n 1 14 PHE n 1 15 ASP n 1 16 LYS n 1 17 LEU n 1 18 VAL n 1 19 GLU n 1 20 ALA n 1 21 LEU n 1 22 LYS n 1 23 ASN n 1 24 LYS n 1 25 VAL n 1 26 ASP n 1 27 LYS n 1 28 MET n 1 29 LYS n 1 30 ALA n 1 31 ALA n 1 32 PHE n 1 33 ARG n 1 34 MET n 1 35 ASP n 1 36 GLN n 1 37 PHE n 1 38 HIS n 1 39 GLU n 1 40 GLU n 1 41 ARG n 1 42 MET n 1 43 LYS n 1 44 ASP n 1 45 TRP n 1 46 PHE n 1 47 LYS n 1 48 ASP n 1 49 LEU n 1 50 ARG n 1 51 LYS n 1 52 GLU n 1 53 VAL n 1 54 GLU n 1 55 GLN n 1 56 MET n 1 57 ARG n 1 58 ARG n 1 59 ALA n 1 60 VAL n 1 61 ARG n 1 62 ASN n 1 63 TYR n 1 64 ALA n 1 65 SER n 1 66 GLU n 1 67 ALA n 1 68 LEU n 1 69 SER n 1 70 LYS n 1 71 ILE n 1 72 ASN n 1 73 ASP n 1 74 LEU n 1 75 PRO n 1 76 ILE n 1 77 THR n 1 78 ASN n 1 79 ASP n 1 80 ASP n 1 81 LYS n 1 82 LYS n 1 83 LEU n 1 84 ALA n 1 85 SER n 1 86 ASN n 1 87 ASP n 1 88 VAL n 1 89 LEU n 1 90 LYS n 1 91 LEU n 1 92 VAL n 1 93 ALA n 1 94 GLU n 1 95 VAL n 1 96 TRP n 1 97 LYS n 1 98 LYS n 1 99 LEU n 1 100 GLU n 1 101 ALA n 1 102 ILE n 1 103 LEU n 1 104 ALA n 1 105 ASP n 1 106 VAL n 1 107 GLU n 1 108 ALA n 1 109 TRP n 1 110 PHE n 1 111 THR n 1 112 HIS n 1 113 HIS n 1 114 HIS n 1 115 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'synthetic construct' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 32630 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4L8I _struct_ref.pdbx_db_accession 4L8I _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ;GSMSDIRKDLEERFDKLVEALKNKVDKMKAAFRMDQFHEERMKDWFKDLRKEVEQMRRAVRNYASEALSKINDLPITNDD KKLASNDVLKLVAEVWKKLEAILADVEAWFTHHHH ; _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4L8I A 1 ? 115 ? 4L8I 1 ? 115 ? 1 115 2 1 4L8I B 1 ? 115 ? 4L8I 1 ? 115 ? 1 115 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4L8I _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.68 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 54.11 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 278 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '22% PEG 3350, 0.2M ammonium citrate tribasic, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 278K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 5.0.1' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 5.0.1 # _reflns.entry_id 4L8I _reflns.d_resolution_high 2.000 _reflns.d_resolution_low 50.000 _reflns.number_obs 20776 _reflns.pdbx_Rmerge_I_obs 0.067 _reflns.pdbx_netI_over_sigmaI 15.200 _reflns.pdbx_chi_squared 1.007 _reflns.pdbx_redundancy 7.000 _reflns.percent_possible_obs 99.300 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.000 2.070 ? ? ? 0.392 ? ? 0.900 6.600 ? 1933 94.000 1 1 2.070 2.150 ? ? ? 0.258 ? ? 0.980 7.200 ? 2039 100.000 2 1 2.150 2.250 ? ? ? 0.194 ? ? 1.059 7.200 ? 2038 100.000 3 1 2.250 2.370 ? ? ? 0.143 ? ? 1.025 7.200 ? 2051 100.000 4 1 2.370 2.520 ? ? ? 0.107 ? ? 1.045 7.100 ? 2062 100.000 5 1 2.520 2.710 ? ? ? 0.084 ? ? 0.996 7.200 ? 2069 100.000 6 1 2.710 2.990 ? ? ? 0.069 ? ? 0.985 7.100 ? 2086 100.000 7 1 2.990 3.420 ? ? ? 0.062 ? ? 0.968 7.100 ? 2088 100.000 8 1 3.420 4.310 ? ? ? 0.081 ? ? 1.093 7.000 ? 2128 99.900 9 1 4.310 50.000 ? ? ? 0.038 ? ? 1.005 6.400 ? 2282 99.300 10 1 # _refine.entry_id 4L8I _refine.ls_d_res_high 2.0000 _refine.ls_d_res_low 46.2500 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.3800 _refine.ls_number_reflns_obs 20687 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2089 _refine.ls_R_factor_R_work 0.2068 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2470 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 1064 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 40.8097 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.0200 _refine.aniso_B[2][2] 0.0200 _refine.aniso_B[3][3] -0.0300 _refine.aniso_B[1][2] 0.0100 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] -0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9500 _refine.correlation_coeff_Fo_to_Fc_free 0.9350 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.1730 _refine.pdbx_overall_ESU_R_Free 0.1600 _refine.overall_SU_ML 0.1140 _refine.overall_SU_B 9.1150 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 96.550 _refine.B_iso_min 10.290 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1800 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 153 _refine_hist.number_atoms_total 1953 _refine_hist.d_res_high 2.0000 _refine_hist.d_res_low 46.2500 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1842 0.016 0.022 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1266 0.000 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2481 1.555 1.945 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 3078 0.904 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 228 4.739 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 92 36.152 24.457 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 349 14.606 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 15 15.500 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 276 0.068 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2046 0.009 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 375 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1135 1.607 2.000 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 451 0.538 2.000 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1811 2.723 3.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 707 4.485 4.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 668 6.693 6.000 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.0030 _refine_ls_shell.d_res_low 2.0550 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 98.3600 _refine_ls_shell.number_reflns_R_work 1433 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2350 _refine_ls_shell.R_factor_R_free 0.3500 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 70 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1503 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4L8I _struct.title 'Crystal structure of RSV epitope scaffold FFL_005' _struct.pdbx_descriptor 'RSV epitope scaffold FFL_005' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4L8I _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text 'three-helix bundle, IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 2 ? PHE A 32 ? SER A 2 PHE A 32 1 ? 31 HELX_P HELX_P2 2 ASP A 35 ? LEU A 74 ? ASP A 35 LEU A 74 1 ? 40 HELX_P HELX_P3 3 THR A 77 ? HIS A 115 ? THR A 77 HIS A 115 1 ? 39 HELX_P HELX_P4 4 SER B 2 ? GLN B 36 ? SER B 2 GLN B 36 1 ? 35 HELX_P HELX_P5 5 HIS B 38 ? ASP B 73 ? HIS B 38 ASP B 73 1 ? 36 HELX_P HELX_P6 6 THR B 77 ? HIS B 112 ? THR B 77 HIS B 112 1 ? 36 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 4L8I _atom_sites.fract_transf_matrix[1][1] 0.018724 _atom_sites.fract_transf_matrix[1][2] 0.010811 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021621 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005602 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 ? ? ? A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 MET 3 3 3 MET MET A . n A 1 4 SER 4 4 4 SER SER A . n A 1 5 ASP 5 5 5 ASP ASP A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 ARG 7 7 7 ARG ARG A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 ASP 9 9 9 ASP ASP A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 ARG 13 13 13 ARG ARG A . n A 1 14 PHE 14 14 14 PHE PHE A . n A 1 15 ASP 15 15 15 ASP ASP A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 LYS 22 22 22 LYS LYS A . n A 1 23 ASN 23 23 23 ASN ASN A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 ASP 26 26 26 ASP ASP A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 MET 28 28 28 MET MET A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 PHE 32 32 32 PHE PHE A . n A 1 33 ARG 33 33 33 ARG ARG A . n A 1 34 MET 34 34 34 MET MET A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 GLN 36 36 36 GLN GLN A . n A 1 37 PHE 37 37 37 PHE PHE A . n A 1 38 HIS 38 38 38 HIS HIS A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 ARG 41 41 41 ARG ARG A . n A 1 42 MET 42 42 42 MET MET A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 ASP 44 44 44 ASP ASP A . n A 1 45 TRP 45 45 45 TRP TRP A . n A 1 46 PHE 46 46 46 PHE PHE A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 ARG 50 50 50 ARG ARG A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 VAL 53 53 53 VAL VAL A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 GLN 55 55 55 GLN GLN A . n A 1 56 MET 56 56 56 MET MET A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 ARG 58 58 58 ARG ARG A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 ASN 62 62 62 ASN ASN A . n A 1 63 TYR 63 63 63 TYR TYR A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 SER 69 69 69 SER SER A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 ILE 71 71 71 ILE ILE A . n A 1 72 ASN 72 72 72 ASN ASN A . n A 1 73 ASP 73 73 73 ASP ASP A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 PRO 75 75 75 PRO PRO A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 THR 77 77 77 THR THR A . n A 1 78 ASN 78 78 78 ASN ASN A . n A 1 79 ASP 79 79 79 ASP ASP A . n A 1 80 ASP 80 80 80 ASP ASP A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 LYS 82 82 82 LYS LYS A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 ASN 86 86 86 ASN ASN A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 LYS 90 90 90 LYS LYS A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 ALA 93 93 93 ALA ALA A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 VAL 95 95 95 VAL VAL A . n A 1 96 TRP 96 96 96 TRP TRP A . n A 1 97 LYS 97 97 97 LYS LYS A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 GLU 100 100 100 GLU GLU A . n A 1 101 ALA 101 101 101 ALA ALA A . n A 1 102 ILE 102 102 102 ILE ILE A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 ALA 104 104 104 ALA ALA A . n A 1 105 ASP 105 105 105 ASP ASP A . n A 1 106 VAL 106 106 106 VAL VAL A . n A 1 107 GLU 107 107 107 GLU GLU A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 TRP 109 109 109 TRP TRP A . n A 1 110 PHE 110 110 110 PHE PHE A . n A 1 111 THR 111 111 111 THR THR A . n A 1 112 HIS 112 112 112 HIS HIS A . n A 1 113 HIS 113 113 113 HIS HIS A . n A 1 114 HIS 114 114 114 HIS HIS A . n A 1 115 HIS 115 115 115 HIS HIS A . n B 1 1 GLY 1 1 1 GLY GLY B . n B 1 2 SER 2 2 2 SER SER B . n B 1 3 MET 3 3 3 MET MET B . n B 1 4 SER 4 4 4 SER SER B . n B 1 5 ASP 5 5 5 ASP ASP B . n B 1 6 ILE 6 6 6 ILE ILE B . n B 1 7 ARG 7 7 7 ARG ARG B . n B 1 8 LYS 8 8 8 LYS LYS B . n B 1 9 ASP 9 9 9 ASP ASP B . n B 1 10 LEU 10 10 10 LEU LEU B . n B 1 11 GLU 11 11 11 GLU GLU B . n B 1 12 GLU 12 12 12 GLU GLU B . n B 1 13 ARG 13 13 13 ARG ARG B . n B 1 14 PHE 14 14 14 PHE PHE B . n B 1 15 ASP 15 15 15 ASP ASP B . n B 1 16 LYS 16 16 16 LYS LYS B . n B 1 17 LEU 17 17 17 LEU LEU B . n B 1 18 VAL 18 18 18 VAL VAL B . n B 1 19 GLU 19 19 19 GLU GLU B . n B 1 20 ALA 20 20 20 ALA ALA B . n B 1 21 LEU 21 21 21 LEU LEU B . n B 1 22 LYS 22 22 22 LYS LYS B . n B 1 23 ASN 23 23 23 ASN ASN B . n B 1 24 LYS 24 24 24 LYS LYS B . n B 1 25 VAL 25 25 25 VAL VAL B . n B 1 26 ASP 26 26 26 ASP ASP B . n B 1 27 LYS 27 27 27 LYS LYS B . n B 1 28 MET 28 28 28 MET MET B . n B 1 29 LYS 29 29 29 LYS LYS B . n B 1 30 ALA 30 30 30 ALA ALA B . n B 1 31 ALA 31 31 31 ALA ALA B . n B 1 32 PHE 32 32 32 PHE PHE B . n B 1 33 ARG 33 33 33 ARG ARG B . n B 1 34 MET 34 34 34 MET MET B . n B 1 35 ASP 35 35 35 ASP ASP B . n B 1 36 GLN 36 36 36 GLN GLN B . n B 1 37 PHE 37 37 37 PHE PHE B . n B 1 38 HIS 38 38 38 HIS HIS B . n B 1 39 GLU 39 39 39 GLU GLU B . n B 1 40 GLU 40 40 40 GLU GLU B . n B 1 41 ARG 41 41 41 ARG ARG B . n B 1 42 MET 42 42 42 MET MET B . n B 1 43 LYS 43 43 43 LYS LYS B . n B 1 44 ASP 44 44 44 ASP ASP B . n B 1 45 TRP 45 45 45 TRP TRP B . n B 1 46 PHE 46 46 46 PHE PHE B . n B 1 47 LYS 47 47 47 LYS LYS B . n B 1 48 ASP 48 48 48 ASP ASP B . n B 1 49 LEU 49 49 49 LEU LEU B . n B 1 50 ARG 50 50 50 ARG ARG B . n B 1 51 LYS 51 51 51 LYS LYS B . n B 1 52 GLU 52 52 52 GLU GLU B . n B 1 53 VAL 53 53 53 VAL VAL B . n B 1 54 GLU 54 54 54 GLU GLU B . n B 1 55 GLN 55 55 55 GLN GLN B . n B 1 56 MET 56 56 56 MET MET B . n B 1 57 ARG 57 57 57 ARG ARG B . n B 1 58 ARG 58 58 58 ARG ARG B . n B 1 59 ALA 59 59 59 ALA ALA B . n B 1 60 VAL 60 60 60 VAL VAL B . n B 1 61 ARG 61 61 61 ARG ARG B . n B 1 62 ASN 62 62 62 ASN ASN B . n B 1 63 TYR 63 63 63 TYR TYR B . n B 1 64 ALA 64 64 64 ALA ALA B . n B 1 65 SER 65 65 65 SER SER B . n B 1 66 GLU 66 66 66 GLU GLU B . n B 1 67 ALA 67 67 67 ALA ALA B . n B 1 68 LEU 68 68 68 LEU LEU B . n B 1 69 SER 69 69 69 SER SER B . n B 1 70 LYS 70 70 70 LYS LYS B . n B 1 71 ILE 71 71 71 ILE ILE B . n B 1 72 ASN 72 72 72 ASN ASN B . n B 1 73 ASP 73 73 73 ASP ASP B . n B 1 74 LEU 74 74 74 LEU LEU B . n B 1 75 PRO 75 75 75 PRO PRO B . n B 1 76 ILE 76 76 76 ILE ILE B . n B 1 77 THR 77 77 77 THR THR B . n B 1 78 ASN 78 78 78 ASN ASN B . n B 1 79 ASP 79 79 79 ASP ASP B . n B 1 80 ASP 80 80 80 ASP ASP B . n B 1 81 LYS 81 81 81 LYS LYS B . n B 1 82 LYS 82 82 82 LYS LYS B . n B 1 83 LEU 83 83 83 LEU LEU B . n B 1 84 ALA 84 84 84 ALA ALA B . n B 1 85 SER 85 85 85 SER SER B . n B 1 86 ASN 86 86 86 ASN ASN B . n B 1 87 ASP 87 87 87 ASP ASP B . n B 1 88 VAL 88 88 88 VAL VAL B . n B 1 89 LEU 89 89 89 LEU LEU B . n B 1 90 LYS 90 90 90 LYS LYS B . n B 1 91 LEU 91 91 91 LEU LEU B . n B 1 92 VAL 92 92 92 VAL VAL B . n B 1 93 ALA 93 93 93 ALA ALA B . n B 1 94 GLU 94 94 94 GLU GLU B . n B 1 95 VAL 95 95 95 VAL VAL B . n B 1 96 TRP 96 96 96 TRP TRP B . n B 1 97 LYS 97 97 97 LYS LYS B . n B 1 98 LYS 98 98 98 LYS LYS B . n B 1 99 LEU 99 99 99 LEU LEU B . n B 1 100 GLU 100 100 100 GLU GLU B . n B 1 101 ALA 101 101 101 ALA ALA B . n B 1 102 ILE 102 102 102 ILE ILE B . n B 1 103 LEU 103 103 103 LEU LEU B . n B 1 104 ALA 104 104 104 ALA ALA B . n B 1 105 ASP 105 105 105 ASP ASP B . n B 1 106 VAL 106 106 106 VAL VAL B . n B 1 107 GLU 107 107 107 GLU GLU B . n B 1 108 ALA 108 108 108 ALA ALA B . n B 1 109 TRP 109 109 109 TRP TRP B . n B 1 110 PHE 110 110 110 PHE PHE B . n B 1 111 THR 111 111 111 THR THR B . n B 1 112 HIS 112 112 112 HIS HIS B . n B 1 113 HIS 113 113 ? ? ? B . n B 1 114 HIS 114 114 ? ? ? B . n B 1 115 HIS 115 115 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 201 1 HOH HOH A . C 2 HOH 2 202 2 HOH HOH A . C 2 HOH 3 203 3 HOH HOH A . C 2 HOH 4 204 4 HOH HOH A . C 2 HOH 5 205 5 HOH HOH A . C 2 HOH 6 206 6 HOH HOH A . C 2 HOH 7 207 7 HOH HOH A . C 2 HOH 8 208 8 HOH HOH A . C 2 HOH 9 209 9 HOH HOH A . C 2 HOH 10 210 10 HOH HOH A . C 2 HOH 11 211 11 HOH HOH A . C 2 HOH 12 212 12 HOH HOH A . C 2 HOH 13 213 13 HOH HOH A . C 2 HOH 14 214 14 HOH HOH A . C 2 HOH 15 215 15 HOH HOH A . C 2 HOH 16 216 16 HOH HOH A . C 2 HOH 17 217 17 HOH HOH A . C 2 HOH 18 218 19 HOH HOH A . C 2 HOH 19 219 20 HOH HOH A . C 2 HOH 20 220 21 HOH HOH A . C 2 HOH 21 221 22 HOH HOH A . C 2 HOH 22 222 23 HOH HOH A . C 2 HOH 23 223 24 HOH HOH A . C 2 HOH 24 224 25 HOH HOH A . C 2 HOH 25 225 26 HOH HOH A . C 2 HOH 26 226 27 HOH HOH A . C 2 HOH 27 227 28 HOH HOH A . C 2 HOH 28 228 29 HOH HOH A . C 2 HOH 29 229 30 HOH HOH A . C 2 HOH 30 230 31 HOH HOH A . C 2 HOH 31 231 32 HOH HOH A . C 2 HOH 32 232 33 HOH HOH A . C 2 HOH 33 233 34 HOH HOH A . C 2 HOH 34 234 35 HOH HOH A . C 2 HOH 35 235 36 HOH HOH A . C 2 HOH 36 236 37 HOH HOH A . C 2 HOH 37 237 38 HOH HOH A . C 2 HOH 38 238 39 HOH HOH A . C 2 HOH 39 239 40 HOH HOH A . C 2 HOH 40 240 41 HOH HOH A . C 2 HOH 41 241 42 HOH HOH A . C 2 HOH 42 242 43 HOH HOH A . C 2 HOH 43 243 44 HOH HOH A . C 2 HOH 44 244 45 HOH HOH A . C 2 HOH 45 245 66 HOH HOH A . C 2 HOH 46 246 81 HOH HOH A . C 2 HOH 47 247 82 HOH HOH A . C 2 HOH 48 248 84 HOH HOH A . C 2 HOH 49 249 85 HOH HOH A . C 2 HOH 50 250 86 HOH HOH A . C 2 HOH 51 251 87 HOH HOH A . C 2 HOH 52 252 88 HOH HOH A . C 2 HOH 53 253 89 HOH HOH A . C 2 HOH 54 254 90 HOH HOH A . C 2 HOH 55 255 96 HOH HOH A . C 2 HOH 56 256 97 HOH HOH A . C 2 HOH 57 257 99 HOH HOH A . C 2 HOH 58 258 100 HOH HOH A . C 2 HOH 59 259 101 HOH HOH A . C 2 HOH 60 260 108 HOH HOH A . C 2 HOH 61 261 109 HOH HOH A . C 2 HOH 62 262 110 HOH HOH A . C 2 HOH 63 263 111 HOH HOH A . C 2 HOH 64 264 112 HOH HOH A . C 2 HOH 65 265 117 HOH HOH A . C 2 HOH 66 266 119 HOH HOH A . C 2 HOH 67 267 120 HOH HOH A . C 2 HOH 68 268 124 HOH HOH A . C 2 HOH 69 269 125 HOH HOH A . C 2 HOH 70 270 126 HOH HOH A . C 2 HOH 71 271 127 HOH HOH A . C 2 HOH 72 272 131 HOH HOH A . C 2 HOH 73 273 138 HOH HOH A . C 2 HOH 74 274 139 HOH HOH A . C 2 HOH 75 275 140 HOH HOH A . C 2 HOH 76 276 142 HOH HOH A . C 2 HOH 77 277 143 HOH HOH A . C 2 HOH 78 278 144 HOH HOH A . C 2 HOH 79 279 146 HOH HOH A . C 2 HOH 80 280 147 HOH HOH A . D 2 HOH 1 201 114 HOH HOH B . D 2 HOH 2 202 18 HOH HOH B . D 2 HOH 3 203 46 HOH HOH B . D 2 HOH 4 204 47 HOH HOH B . D 2 HOH 5 205 48 HOH HOH B . D 2 HOH 6 206 49 HOH HOH B . D 2 HOH 7 207 50 HOH HOH B . D 2 HOH 8 208 51 HOH HOH B . D 2 HOH 9 209 52 HOH HOH B . D 2 HOH 10 210 53 HOH HOH B . D 2 HOH 11 211 54 HOH HOH B . D 2 HOH 12 212 55 HOH HOH B . D 2 HOH 13 213 56 HOH HOH B . D 2 HOH 14 214 57 HOH HOH B . D 2 HOH 15 215 58 HOH HOH B . D 2 HOH 16 216 59 HOH HOH B . D 2 HOH 17 217 60 HOH HOH B . D 2 HOH 18 218 61 HOH HOH B . D 2 HOH 19 219 62 HOH HOH B . D 2 HOH 20 220 63 HOH HOH B . D 2 HOH 21 221 64 HOH HOH B . D 2 HOH 22 222 65 HOH HOH B . D 2 HOH 23 223 67 HOH HOH B . D 2 HOH 24 224 68 HOH HOH B . D 2 HOH 25 225 69 HOH HOH B . D 2 HOH 26 226 70 HOH HOH B . D 2 HOH 27 227 71 HOH HOH B . D 2 HOH 28 228 72 HOH HOH B . D 2 HOH 29 229 73 HOH HOH B . D 2 HOH 30 230 74 HOH HOH B . D 2 HOH 31 231 75 HOH HOH B . D 2 HOH 32 232 76 HOH HOH B . D 2 HOH 33 233 77 HOH HOH B . D 2 HOH 34 234 78 HOH HOH B . D 2 HOH 35 235 79 HOH HOH B . D 2 HOH 36 236 80 HOH HOH B . D 2 HOH 37 237 83 HOH HOH B . D 2 HOH 38 238 91 HOH HOH B . D 2 HOH 39 239 92 HOH HOH B . D 2 HOH 40 240 93 HOH HOH B . D 2 HOH 41 241 94 HOH HOH B . D 2 HOH 42 242 95 HOH HOH B . D 2 HOH 43 243 98 HOH HOH B . D 2 HOH 44 244 102 HOH HOH B . D 2 HOH 45 245 103 HOH HOH B . D 2 HOH 46 246 104 HOH HOH B . D 2 HOH 47 247 105 HOH HOH B . D 2 HOH 48 248 106 HOH HOH B . D 2 HOH 49 249 107 HOH HOH B . D 2 HOH 50 250 113 HOH HOH B . D 2 HOH 51 251 115 HOH HOH B . D 2 HOH 52 252 116 HOH HOH B . D 2 HOH 53 253 118 HOH HOH B . D 2 HOH 54 254 121 HOH HOH B . D 2 HOH 55 255 122 HOH HOH B . D 2 HOH 56 256 123 HOH HOH B . D 2 HOH 57 257 128 HOH HOH B . D 2 HOH 58 258 129 HOH HOH B . D 2 HOH 59 259 130 HOH HOH B . D 2 HOH 60 260 132 HOH HOH B . D 2 HOH 61 261 133 HOH HOH B . D 2 HOH 62 262 134 HOH HOH B . D 2 HOH 63 263 135 HOH HOH B . D 2 HOH 64 264 136 HOH HOH B . D 2 HOH 65 265 137 HOH HOH B . D 2 HOH 66 266 141 HOH HOH B . D 2 HOH 67 267 145 HOH HOH B . D 2 HOH 68 268 148 HOH HOH B . D 2 HOH 69 269 149 HOH HOH B . D 2 HOH 70 270 150 HOH HOH B . D 2 HOH 71 271 151 HOH HOH B . D 2 HOH 72 272 152 HOH HOH B . D 2 HOH 73 273 153 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 3 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C 2 1 B,D 3 1 A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 3 'ABSA (A^2)' 1660 ? 3 MORE -7 ? 3 'SSA (A^2)' 13250 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-02-12 2 'Structure model' 1 1 2017-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_software.classification' 2 2 'Structure model' '_software.contact_author' 3 2 'Structure model' '_software.contact_author_email' 4 2 'Structure model' '_software.date' 5 2 'Structure model' '_software.language' 6 2 'Structure model' '_software.location' 7 2 'Structure model' '_software.name' 8 2 'Structure model' '_software.type' 9 2 'Structure model' '_software.version' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -14.6217 10.2643 28.5882 0.1238 0.2808 0.1556 -0.1301 -0.0312 0.1172 5.3387 5.8665 4.0571 -3.6117 -2.2336 2.3988 -0.0959 0.0190 0.0769 -0.5320 0.1150 -0.4196 0.2457 -0.0305 0.5066 'X-RAY DIFFRACTION' 2 ? refined -21.1076 14.8707 22.9670 0.1599 0.2104 0.1363 -0.0976 0.0026 0.0366 3.1778 3.2314 1.5296 -1.4987 -1.0750 0.5234 0.0686 -0.1345 0.0659 -0.1353 -0.0374 -0.0985 -0.0486 -0.0887 0.1683 'X-RAY DIFFRACTION' 3 ? refined -22.8899 30.6875 7.4729 0.2137 0.1526 0.1685 -0.0675 0.0642 -0.0166 3.8441 0.9330 4.7643 1.5336 -4.2100 -1.6492 0.2186 -0.0764 -0.1423 0.1257 -0.0002 0.0136 0.0688 -0.3897 -0.1014 'X-RAY DIFFRACTION' 4 ? refined -28.3511 21.0540 16.2311 0.1144 0.1355 0.1555 -0.0571 0.0166 -0.0403 8.1129 1.6293 7.5268 -1.1050 -7.0171 1.2679 0.1487 0.0020 -0.1507 -0.2601 0.0291 -0.1779 -0.0226 -0.1002 0.2322 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 2 A 38 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 A 39 A 115 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 B 1 B 71 ? . . . . ? 'X-RAY DIFFRACTION' 4 4 B 72 B 112 ? . . . . ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 REFMAC 5.5.0109 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 6 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 7 PHASER . ? ? ? ? phasing ? ? ? # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 8 ? CG ? A LYS 8 CG 2 1 Y 1 A LYS 8 ? CD ? A LYS 8 CD 3 1 Y 1 A LYS 8 ? CE ? A LYS 8 CE 4 1 Y 1 A LYS 8 ? NZ ? A LYS 8 NZ 5 1 Y 1 A GLU 12 ? CG ? A GLU 12 CG 6 1 Y 1 A GLU 12 ? CD ? A GLU 12 CD 7 1 Y 1 A GLU 12 ? OE1 ? A GLU 12 OE1 8 1 Y 1 A GLU 12 ? OE2 ? A GLU 12 OE2 9 1 Y 1 A GLU 19 ? CG ? A GLU 19 CG 10 1 Y 1 A GLU 19 ? CD ? A GLU 19 CD 11 1 Y 1 A GLU 19 ? OE1 ? A GLU 19 OE1 12 1 Y 1 A GLU 19 ? OE2 ? A GLU 19 OE2 13 1 Y 1 A LYS 22 ? CE ? A LYS 22 CE 14 1 Y 1 A LYS 22 ? NZ ? A LYS 22 NZ 15 1 Y 1 A LYS 27 ? CE ? A LYS 27 CE 16 1 Y 1 A LYS 27 ? NZ ? A LYS 27 NZ 17 1 Y 1 A MET 34 ? CG ? A MET 34 CG 18 1 Y 1 A MET 34 ? SD ? A MET 34 SD 19 1 Y 1 A MET 34 ? CE ? A MET 34 CE 20 1 Y 1 A GLU 40 ? CG ? A GLU 40 CG 21 1 Y 1 A GLU 40 ? CD ? A GLU 40 CD 22 1 Y 1 A GLU 40 ? OE1 ? A GLU 40 OE1 23 1 Y 1 A GLU 40 ? OE2 ? A GLU 40 OE2 24 1 Y 1 A LYS 43 ? CE ? A LYS 43 CE 25 1 Y 1 A LYS 43 ? NZ ? A LYS 43 NZ 26 1 Y 1 A LYS 47 ? CE ? A LYS 47 CE 27 1 Y 1 A LYS 47 ? NZ ? A LYS 47 NZ 28 1 Y 1 A LYS 51 ? CD ? A LYS 51 CD 29 1 Y 1 A LYS 51 ? CE ? A LYS 51 CE 30 1 Y 1 A LYS 51 ? NZ ? A LYS 51 NZ 31 1 Y 1 A ARG 58 ? NE ? A ARG 58 NE 32 1 Y 1 A ARG 58 ? CZ ? A ARG 58 CZ 33 1 Y 1 A ARG 58 ? NH1 ? A ARG 58 NH1 34 1 Y 1 A ARG 58 ? NH2 ? A ARG 58 NH2 35 1 Y 1 A LYS 90 ? NZ ? A LYS 90 NZ 36 1 Y 1 A HIS 112 ? CG ? A HIS 112 CG 37 1 Y 1 A HIS 112 ? ND1 ? A HIS 112 ND1 38 1 Y 1 A HIS 112 ? CD2 ? A HIS 112 CD2 39 1 Y 1 A HIS 112 ? CE1 ? A HIS 112 CE1 40 1 Y 1 A HIS 112 ? NE2 ? A HIS 112 NE2 41 1 Y 1 A HIS 113 ? CG ? A HIS 113 CG 42 1 Y 1 A HIS 113 ? ND1 ? A HIS 113 ND1 43 1 Y 1 A HIS 113 ? CD2 ? A HIS 113 CD2 44 1 Y 1 A HIS 113 ? CE1 ? A HIS 113 CE1 45 1 Y 1 A HIS 113 ? NE2 ? A HIS 113 NE2 46 1 Y 1 A HIS 115 ? CG ? A HIS 115 CG 47 1 Y 1 A HIS 115 ? ND1 ? A HIS 115 ND1 48 1 Y 1 A HIS 115 ? CD2 ? A HIS 115 CD2 49 1 Y 1 A HIS 115 ? CE1 ? A HIS 115 CE1 50 1 Y 1 A HIS 115 ? NE2 ? A HIS 115 NE2 51 1 Y 1 B SER 2 ? OG ? B SER 2 OG 52 1 Y 1 B LYS 8 ? CD ? B LYS 8 CD 53 1 Y 1 B LYS 8 ? CE ? B LYS 8 CE 54 1 Y 1 B LYS 8 ? NZ ? B LYS 8 NZ 55 1 Y 1 B GLU 12 ? CD ? B GLU 12 CD 56 1 Y 1 B GLU 12 ? OE1 ? B GLU 12 OE1 57 1 Y 1 B GLU 12 ? OE2 ? B GLU 12 OE2 58 1 Y 1 B ARG 13 ? NE ? B ARG 13 NE 59 1 Y 1 B ARG 13 ? CZ ? B ARG 13 CZ 60 1 Y 1 B ARG 13 ? NH1 ? B ARG 13 NH1 61 1 Y 1 B ARG 13 ? NH2 ? B ARG 13 NH2 62 1 Y 1 B LYS 16 ? CE ? B LYS 16 CE 63 1 Y 1 B LYS 16 ? NZ ? B LYS 16 NZ 64 1 Y 1 B LYS 24 ? CD ? B LYS 24 CD 65 1 Y 1 B LYS 24 ? CE ? B LYS 24 CE 66 1 Y 1 B LYS 24 ? NZ ? B LYS 24 NZ 67 1 Y 1 B LYS 27 ? CE ? B LYS 27 CE 68 1 Y 1 B LYS 27 ? NZ ? B LYS 27 NZ 69 1 Y 1 B LYS 43 ? CE ? B LYS 43 CE 70 1 Y 1 B LYS 43 ? NZ ? B LYS 43 NZ 71 1 Y 1 B LYS 47 ? CD ? B LYS 47 CD 72 1 Y 1 B LYS 47 ? CE ? B LYS 47 CE 73 1 Y 1 B LYS 47 ? NZ ? B LYS 47 NZ 74 1 Y 1 B LYS 51 ? CD ? B LYS 51 CD 75 1 Y 1 B LYS 51 ? CE ? B LYS 51 CE 76 1 Y 1 B LYS 51 ? NZ ? B LYS 51 NZ 77 1 Y 1 B GLU 52 ? OE1 ? B GLU 52 OE1 78 1 Y 1 B GLU 52 ? OE2 ? B GLU 52 OE2 79 1 Y 1 B LYS 70 ? CE ? B LYS 70 CE 80 1 Y 1 B LYS 70 ? NZ ? B LYS 70 NZ 81 1 Y 1 B PHE 110 ? CG ? B PHE 110 CG 82 1 Y 1 B PHE 110 ? CD1 ? B PHE 110 CD1 83 1 Y 1 B PHE 110 ? CD2 ? B PHE 110 CD2 84 1 Y 1 B PHE 110 ? CE1 ? B PHE 110 CE1 85 1 Y 1 B PHE 110 ? CE2 ? B PHE 110 CE2 86 1 Y 1 B PHE 110 ? CZ ? B PHE 110 CZ 87 1 Y 1 B THR 111 ? OG1 ? B THR 111 OG1 88 1 Y 1 B THR 111 ? CG2 ? B THR 111 CG2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 1 ? A GLY 1 2 1 Y 1 B HIS 113 ? B HIS 113 3 1 Y 1 B HIS 114 ? B HIS 114 4 1 Y 1 B HIS 115 ? B HIS 115 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #