HEADER TRANSCRIPTION 18-JUN-13 4L9N TITLE CRYSTAL STRUCTURE OF MEPR A103V MUTANT FROM MULTIDRUG RESISTANT S. TITLE 2 AUREUS CLINICAL ISOLATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MEPR; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MARR FAMILY TRANSCRIPTION REPRESSOR MEPR; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: MEPR; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS WING-HELIX-TURN-HELIX, WHTH, TRANSCRIPTION REPRESSION, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR I.BIRUKOU,R.G.BRENNAN REVDAT 4 28-FEB-24 4L9N 1 REMARK SEQADV REVDAT 3 15-NOV-17 4L9N 1 REMARK REVDAT 2 30-OCT-13 4L9N 1 JRNL REVDAT 1 11-SEP-13 4L9N 0 JRNL AUTH I.BIRUKOU,N.K.TONTHAT,S.M.SEO,B.D.SCHINDLER,G.W.KAATZ, JRNL AUTH 2 R.G.BRENNAN JRNL TITL THE MOLECULAR MECHANISMS OF ALLOSTERIC MUTATIONS IMPAIRING JRNL TITL 2 MEPR REPRESSOR FUNCTION IN MULTIDRUG-RESISTANT STRAINS OF JRNL TITL 3 STAPHYLOCOCCUS AUREUS. JRNL REF MBIO V. 4 00528 2013 JRNL REFN ESSN 2150-7511 JRNL PMID 23982071 JRNL DOI 10.1128/MBIO.00528-13 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.8 REMARK 3 NUMBER OF REFLECTIONS : 39266 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.830 REMARK 3 FREE R VALUE TEST SET COUNT : 1895 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 25.6410 - 3.8527 1.00 3152 160 0.1916 0.1982 REMARK 3 2 3.8527 - 3.0596 1.00 3010 154 0.1786 0.2063 REMARK 3 3 3.0596 - 2.6733 0.99 2936 147 0.1886 0.2202 REMARK 3 4 2.6733 - 2.4291 0.99 2930 149 0.1853 0.2257 REMARK 3 5 2.4291 - 2.2551 0.99 2902 145 0.1852 0.2068 REMARK 3 6 2.2551 - 2.1222 0.99 2864 144 0.1751 0.1900 REMARK 3 7 2.1222 - 2.0160 0.98 2869 146 0.1717 0.2546 REMARK 3 8 2.0160 - 1.9283 0.97 2847 144 0.1895 0.2449 REMARK 3 9 1.9283 - 1.8540 0.95 2734 140 0.1961 0.2004 REMARK 3 10 1.8540 - 1.7901 0.92 2671 137 0.2087 0.2734 REMARK 3 11 1.7901 - 1.7341 0.84 2444 116 0.2180 0.2591 REMARK 3 12 1.7341 - 1.6846 0.77 2221 116 0.2352 0.2659 REMARK 3 13 1.6846 - 1.6402 0.70 2022 110 0.2460 0.3087 REMARK 3 14 1.6402 - 1.6000 0.62 1769 87 0.2615 0.2800 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.520 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2500 REMARK 3 ANGLE : 0.908 3410 REMARK 3 CHIRALITY : 0.059 382 REMARK 3 PLANARITY : 0.004 458 REMARK 3 DIHEDRAL : 15.057 954 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.2009 16.0992 25.3627 REMARK 3 T TENSOR REMARK 3 T11: 0.1885 T22: 0.1683 REMARK 3 T33: 0.1627 T12: -0.0490 REMARK 3 T13: 0.0230 T23: -0.0093 REMARK 3 L TENSOR REMARK 3 L11: 1.5529 L22: 4.7655 REMARK 3 L33: 8.7109 L12: 1.3734 REMARK 3 L13: 2.4083 L23: 6.4618 REMARK 3 S TENSOR REMARK 3 S11: 0.2081 S12: -0.1723 S13: -0.1436 REMARK 3 S21: 0.3767 S22: -0.4223 S23: 0.0572 REMARK 3 S31: 0.3615 S32: -0.8193 S33: 0.2782 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 28 THROUGH 43 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.3044 5.2052 14.0247 REMARK 3 T TENSOR REMARK 3 T11: 0.1086 T22: 0.1563 REMARK 3 T33: 0.1598 T12: -0.0152 REMARK 3 T13: -0.0181 T23: -0.0548 REMARK 3 L TENSOR REMARK 3 L11: 8.2072 L22: 1.7451 REMARK 3 L33: 2.7469 L12: 0.1936 REMARK 3 L13: 0.0813 L23: 0.3839 REMARK 3 S TENSOR REMARK 3 S11: -0.1657 S12: -0.5901 S13: 0.1117 REMARK 3 S21: 0.0385 S22: 0.1148 S23: -0.1749 REMARK 3 S31: -0.2305 S32: 0.1535 S33: 0.0660 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 44 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.3542 -1.3007 16.7117 REMARK 3 T TENSOR REMARK 3 T11: 0.2575 T22: 0.2690 REMARK 3 T33: 0.2097 T12: -0.0027 REMARK 3 T13: -0.0435 T23: -0.0080 REMARK 3 L TENSOR REMARK 3 L11: 6.9109 L22: 4.8320 REMARK 3 L33: 5.9319 L12: 4.1650 REMARK 3 L13: -5.4669 L23: -3.6909 REMARK 3 S TENSOR REMARK 3 S11: 0.3339 S12: -0.3822 S13: -0.2021 REMARK 3 S21: 0.6571 S22: -0.2213 S23: -0.0933 REMARK 3 S31: -0.4702 S32: 0.3310 S33: -0.1735 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 62 THROUGH 81 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.5605 -4.1336 8.2960 REMARK 3 T TENSOR REMARK 3 T11: 0.1233 T22: 0.0906 REMARK 3 T33: 0.1387 T12: 0.0202 REMARK 3 T13: 0.0305 T23: -0.0057 REMARK 3 L TENSOR REMARK 3 L11: 3.9448 L22: 3.7731 REMARK 3 L33: 4.5597 L12: 0.2508 REMARK 3 L13: 0.7133 L23: -0.8374 REMARK 3 S TENSOR REMARK 3 S11: -0.1462 S12: -0.0877 S13: -0.4202 REMARK 3 S21: 0.1579 S22: -0.0120 S23: 0.0817 REMARK 3 S31: 0.3551 S32: -0.0356 S33: 0.0356 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 82 THROUGH 88 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.2766 -12.2077 9.4209 REMARK 3 T TENSOR REMARK 3 T11: 0.6798 T22: 0.4095 REMARK 3 T33: 0.9820 T12: 0.8441 REMARK 3 T13: -0.6115 T23: 0.0819 REMARK 3 L TENSOR REMARK 3 L11: 0.6532 L22: 1.5605 REMARK 3 L33: 0.1781 L12: -1.0111 REMARK 3 L13: -0.3433 L23: 0.5268 REMARK 3 S TENSOR REMARK 3 S11: -0.3033 S12: -0.4878 S13: 0.2744 REMARK 3 S21: 0.4655 S22: 0.3276 S23: -0.2900 REMARK 3 S31: -0.1530 S32: 0.0685 S33: 0.1582 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 89 THROUGH 94 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.2729 -2.7399 6.8726 REMARK 3 T TENSOR REMARK 3 T11: 0.0797 T22: 0.1321 REMARK 3 T33: 0.1866 T12: 0.0310 REMARK 3 T13: 0.0330 T23: -0.0113 REMARK 3 L TENSOR REMARK 3 L11: 7.0736 L22: 2.1092 REMARK 3 L33: 7.6915 L12: 3.6101 REMARK 3 L13: 2.3997 L23: 2.5797 REMARK 3 S TENSOR REMARK 3 S11: 0.0492 S12: 0.0808 S13: -0.7372 REMARK 3 S21: 0.3868 S22: -0.2915 S23: -0.6534 REMARK 3 S31: 0.3810 S32: 0.7343 S33: 0.0422 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 95 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.2566 18.0117 10.9816 REMARK 3 T TENSOR REMARK 3 T11: 0.1383 T22: 0.1095 REMARK 3 T33: 0.1785 T12: -0.0153 REMARK 3 T13: -0.0085 T23: -0.0144 REMARK 3 L TENSOR REMARK 3 L11: 0.4367 L22: 4.9256 REMARK 3 L33: 7.5549 L12: -2.2017 REMARK 3 L13: -2.5650 L23: 6.3201 REMARK 3 S TENSOR REMARK 3 S11: -0.1273 S12: 0.0344 S13: -0.0433 REMARK 3 S21: 0.1374 S22: -0.0918 S23: 0.1654 REMARK 3 S31: -0.1109 S32: 0.0153 S33: 0.1821 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 119 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.3989 29.2870 30.3368 REMARK 3 T TENSOR REMARK 3 T11: 0.2420 T22: 0.2041 REMARK 3 T33: 0.1702 T12: -0.0654 REMARK 3 T13: -0.0126 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 6.5241 L22: 2.6795 REMARK 3 L33: 8.1383 L12: -2.1827 REMARK 3 L13: 2.1078 L23: -3.6007 REMARK 3 S TENSOR REMARK 3 S11: 0.2244 S12: -0.1965 S13: -0.1866 REMARK 3 S21: 0.1094 S22: -0.2845 S23: -0.2880 REMARK 3 S31: -0.3134 S32: 0.6079 S33: 0.1944 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.0649 14.1824 34.7960 REMARK 3 T TENSOR REMARK 3 T11: 0.2379 T22: 0.2577 REMARK 3 T33: 0.2434 T12: 0.0378 REMARK 3 T13: 0.0374 T23: 0.0174 REMARK 3 L TENSOR REMARK 3 L11: 0.3983 L22: 8.2824 REMARK 3 L33: 6.2453 L12: -1.5755 REMARK 3 L13: 1.7207 L23: -6.5596 REMARK 3 S TENSOR REMARK 3 S11: 0.3230 S12: 0.0837 S13: -0.0144 REMARK 3 S21: -0.4963 S22: -0.4176 S23: 0.0382 REMARK 3 S31: 0.1629 S32: 0.6889 S33: 0.1984 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 28 THROUGH 43 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.1221 -0.6310 44.5938 REMARK 3 T TENSOR REMARK 3 T11: 0.1417 T22: 0.2219 REMARK 3 T33: 0.1490 T12: 0.0141 REMARK 3 T13: -0.0467 T23: 0.0441 REMARK 3 L TENSOR REMARK 3 L11: 2.2757 L22: 1.7671 REMARK 3 L33: 1.9639 L12: -0.7442 REMARK 3 L13: -1.2999 L23: 0.2247 REMARK 3 S TENSOR REMARK 3 S11: 0.0819 S12: 0.4582 S13: -0.3298 REMARK 3 S21: -0.2034 S22: -0.0180 S23: 0.1801 REMARK 3 S31: -0.0257 S32: -0.2620 S33: -0.0911 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 44 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.0758 -6.6265 42.3235 REMARK 3 T TENSOR REMARK 3 T11: 0.2279 T22: 0.2867 REMARK 3 T33: 0.2078 T12: 0.0168 REMARK 3 T13: -0.0491 T23: -0.0004 REMARK 3 L TENSOR REMARK 3 L11: 8.1374 L22: 2.5413 REMARK 3 L33: 6.7148 L12: -3.2591 REMARK 3 L13: -7.5308 L23: 3.0377 REMARK 3 S TENSOR REMARK 3 S11: 0.0724 S12: 0.1127 S13: -0.0913 REMARK 3 S21: -0.3563 S22: -0.1211 S23: 0.1594 REMARK 3 S31: -0.0481 S32: -0.2548 S33: 0.0037 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 61 THROUGH 81 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.5059 -10.1004 49.3228 REMARK 3 T TENSOR REMARK 3 T11: 0.1102 T22: 0.1340 REMARK 3 T33: 0.1695 T12: 0.0036 REMARK 3 T13: -0.0009 T23: 0.0119 REMARK 3 L TENSOR REMARK 3 L11: 1.1044 L22: 4.2538 REMARK 3 L33: 5.1213 L12: -0.1890 REMARK 3 L13: 1.0653 L23: 3.3403 REMARK 3 S TENSOR REMARK 3 S11: 0.1398 S12: -0.0344 S13: -0.2202 REMARK 3 S21: 0.0074 S22: -0.0326 S23: -0.1757 REMARK 3 S31: 0.3503 S32: -0.1070 S33: -0.1488 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 82 THROUGH 88 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.9749 -19.3601 49.0053 REMARK 3 T TENSOR REMARK 3 T11: 1.4863 T22: 0.5976 REMARK 3 T33: 0.9863 T12: -0.4869 REMARK 3 T13: -0.2998 T23: -0.0627 REMARK 3 L TENSOR REMARK 3 L11: 0.5052 L22: 0.3741 REMARK 3 L33: 1.8759 L12: 0.3389 REMARK 3 L13: 0.0143 L23: -0.3039 REMARK 3 S TENSOR REMARK 3 S11: -0.4833 S12: 0.5516 S13: 0.4242 REMARK 3 S21: -0.7884 S22: 0.0908 S23: 0.7416 REMARK 3 S31: -0.8678 S32: 0.3634 S33: 0.3685 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 89 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.8013 10.3700 49.3323 REMARK 3 T TENSOR REMARK 3 T11: 0.1742 T22: 0.1400 REMARK 3 T33: 0.1605 T12: 0.0082 REMARK 3 T13: 0.0008 T23: -0.0039 REMARK 3 L TENSOR REMARK 3 L11: 1.4952 L22: 9.3939 REMARK 3 L33: 2.1837 L12: 2.9662 REMARK 3 L13: -1.2700 L23: -4.8584 REMARK 3 S TENSOR REMARK 3 S11: -0.1449 S12: 0.1130 S13: -0.0486 REMARK 3 S21: -0.1996 S22: 0.1091 S23: -0.0012 REMARK 3 S31: -0.1389 S32: -0.0997 S33: 0.0233 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 119 THROUGH 140 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.3445 29.2996 32.7089 REMARK 3 T TENSOR REMARK 3 T11: 0.2110 T22: 0.1954 REMARK 3 T33: 0.1952 T12: 0.0031 REMARK 3 T13: 0.0146 T23: 0.0160 REMARK 3 L TENSOR REMARK 3 L11: 3.0434 L22: 6.3856 REMARK 3 L33: 8.3666 L12: 1.8924 REMARK 3 L13: 2.3987 L23: 3.5475 REMARK 3 S TENSOR REMARK 3 S11: 0.0413 S12: 0.0036 S13: -0.0086 REMARK 3 S21: -0.2622 S22: -0.0948 S23: 0.2479 REMARK 3 S31: -0.0793 S32: -0.4527 S33: 0.0845 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4L9N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1000080355. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : SI 111. ROSENBAUM-ROCK DOUBLE REMARK 200 -CRYSTAL MONOCHROMATOR: WATER REMARK 200 COOLED, SAGITTAL FOCUSING 2ND REMARK 200 CRYSTAL, ROSENBAUM-ROCK VERTICAL REMARK 200 FOCUSING MIRROR. REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41385 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX (PHASER) REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M (NH4)2SO4, 0.1 M NA ACETATE PH REMARK 280 4.6 AND 30% PEG 4000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 15.89650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.80700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.56250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.80700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 15.89650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.56250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 87 REMARK 465 HIS A 140 REMARK 465 HIS A 141 REMARK 465 HIS A 142 REMARK 465 HIS A 143 REMARK 465 HIS A 144 REMARK 465 HIS A 145 REMARK 465 MET B 1 REMARK 465 ALA B 83 REMARK 465 HIS B 141 REMARK 465 HIS B 142 REMARK 465 HIS B 143 REMARK 465 HIS B 144 REMARK 465 HIS B 145 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 2 CG CD OE1 OE2 REMARK 470 ARG A 10 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 19 CG CD CE NZ REMARK 470 LYS A 55 CG CD CE NZ REMARK 470 ARG A 73 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 84 CG CD OE1 NE2 REMARK 470 ASP A 85 CG OD1 OD2 REMARK 470 ARG A 88 CG CD NE CZ NH1 NH2 REMARK 470 SER A 136 OG REMARK 470 ARG B 10 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 17 CG CD CE NZ REMARK 470 ARG B 69 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 84 CG CD OE1 NE2 REMARK 470 ASP B 85 CG OD1 OD2 REMARK 470 ARG B 87 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 88 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 376 O HOH B 388 1.94 REMARK 500 OE1 GLN B 113 O HOH B 356 2.13 REMARK 500 O HOH B 423 O HOH B 426 2.14 REMARK 500 OD1 ASP A 109 O HOH A 234 2.17 REMARK 500 O HOH A 280 O HOH A 285 2.18 REMARK 500 O HOH A 202 O HOH A 251 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASN A 66 O HOH B 332 3545 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR B 86 -51.01 61.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4L9J RELATED DB: PDB REMARK 900 RELATED ID: 4L9T RELATED DB: PDB REMARK 900 RELATED ID: 4L9V RELATED DB: PDB REMARK 900 RELATED ID: 4LD5 RELATED DB: PDB DBREF 4L9N A 1 139 UNP Q5Y812 Q5Y812_STAAU 1 139 DBREF 4L9N B 1 139 UNP Q5Y812 Q5Y812_STAAU 1 139 SEQADV 4L9N VAL A 103 UNP Q5Y812 ALA 103 ENGINEERED MUTATION SEQADV 4L9N HIS A 140 UNP Q5Y812 EXPRESSION TAG SEQADV 4L9N HIS A 141 UNP Q5Y812 EXPRESSION TAG SEQADV 4L9N HIS A 142 UNP Q5Y812 EXPRESSION TAG SEQADV 4L9N HIS A 143 UNP Q5Y812 EXPRESSION TAG SEQADV 4L9N HIS A 144 UNP Q5Y812 EXPRESSION TAG SEQADV 4L9N HIS A 145 UNP Q5Y812 EXPRESSION TAG SEQADV 4L9N VAL B 103 UNP Q5Y812 ALA 103 ENGINEERED MUTATION SEQADV 4L9N HIS B 140 UNP Q5Y812 EXPRESSION TAG SEQADV 4L9N HIS B 141 UNP Q5Y812 EXPRESSION TAG SEQADV 4L9N HIS B 142 UNP Q5Y812 EXPRESSION TAG SEQADV 4L9N HIS B 143 UNP Q5Y812 EXPRESSION TAG SEQADV 4L9N HIS B 144 UNP Q5Y812 EXPRESSION TAG SEQADV 4L9N HIS B 145 UNP Q5Y812 EXPRESSION TAG SEQRES 1 A 145 MET GLU PHE THR TYR SER TYR LEU PHE ARG MET ILE SER SEQRES 2 A 145 HIS GLU MET LYS GLN LYS ALA ASP GLN LYS LEU GLU GLN SEQRES 3 A 145 PHE ASP ILE THR ASN GLU GLN GLY HIS THR LEU GLY TYR SEQRES 4 A 145 LEU TYR ALA HIS GLN GLN ASP GLY LEU THR GLN ASN ASP SEQRES 5 A 145 ILE ALA LYS ALA LEU GLN ARG THR GLY PRO THR VAL SER SEQRES 6 A 145 ASN LEU LEU ARG ASN LEU GLU ARG LYS LYS LEU ILE TYR SEQRES 7 A 145 ARG TYR VAL ASP ALA GLN ASP THR ARG ARG LYS ASN ILE SEQRES 8 A 145 GLY LEU THR THR SER GLY ILE LYS LEU VAL GLU VAL PHE SEQRES 9 A 145 THR SER ILE PHE ASP GLU MET GLU GLN THR LEU VAL SER SEQRES 10 A 145 GLN LEU SER GLU GLU GLU ASN GLU GLN MET LYS ALA ASN SEQRES 11 A 145 LEU THR LYS MET LEU SER SER LEU GLN HIS HIS HIS HIS SEQRES 12 A 145 HIS HIS SEQRES 1 B 145 MET GLU PHE THR TYR SER TYR LEU PHE ARG MET ILE SER SEQRES 2 B 145 HIS GLU MET LYS GLN LYS ALA ASP GLN LYS LEU GLU GLN SEQRES 3 B 145 PHE ASP ILE THR ASN GLU GLN GLY HIS THR LEU GLY TYR SEQRES 4 B 145 LEU TYR ALA HIS GLN GLN ASP GLY LEU THR GLN ASN ASP SEQRES 5 B 145 ILE ALA LYS ALA LEU GLN ARG THR GLY PRO THR VAL SER SEQRES 6 B 145 ASN LEU LEU ARG ASN LEU GLU ARG LYS LYS LEU ILE TYR SEQRES 7 B 145 ARG TYR VAL ASP ALA GLN ASP THR ARG ARG LYS ASN ILE SEQRES 8 B 145 GLY LEU THR THR SER GLY ILE LYS LEU VAL GLU VAL PHE SEQRES 9 B 145 THR SER ILE PHE ASP GLU MET GLU GLN THR LEU VAL SER SEQRES 10 B 145 GLN LEU SER GLU GLU GLU ASN GLU GLN MET LYS ALA ASN SEQRES 11 B 145 LEU THR LYS MET LEU SER SER LEU GLN HIS HIS HIS HIS SEQRES 12 B 145 HIS HIS HET SO4 B 201 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 O4 S 2- FORMUL 4 HOH *239(H2 O) HELIX 1 1 THR A 4 GLN A 26 1 23 HELIX 2 2 THR A 30 GLN A 44 1 15 HELIX 3 3 THR A 49 GLN A 58 1 10 HELIX 4 4 GLY A 61 LYS A 74 1 14 HELIX 5 5 THR A 94 SER A 117 1 24 HELIX 6 6 SER A 120 GLN A 139 1 20 HELIX 7 7 THR B 4 GLN B 26 1 23 HELIX 8 8 THR B 30 GLN B 44 1 15 HELIX 9 9 THR B 49 GLN B 58 1 10 HELIX 10 10 THR B 60 LYS B 74 1 15 HELIX 11 11 THR B 94 SER B 117 1 24 HELIX 12 12 SER B 120 HIS B 140 1 21 SHEET 1 A 2 ILE A 77 VAL A 81 0 SHEET 2 A 2 LYS A 89 LEU A 93 -1 O ASN A 90 N TYR A 80 SHEET 1 B 2 ILE B 77 VAL B 81 0 SHEET 2 B 2 LYS B 89 LEU B 93 -1 O GLY B 92 N TYR B 78 SITE 1 AC1 8 SER A 120 GLU A 121 ARG B 59 THR B 60 SITE 2 AC1 8 THR B 63 HOH B 302 HOH B 309 HOH B 343 CRYST1 31.793 95.125 105.614 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.031453 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010512 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009468 0.00000