HEADER SIGNALING PROTEIN 18-JUN-13 4L9S TITLE CRYSTAL STRUCTURE OF H-RAS G12C, GDP-BOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTPASE HRAS; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: GTPASE DOMAIN, UNP RESIDUES 1-166; COMPND 5 SYNONYM: H-RAS-1, HA-RAS, TRANSFORMING PROTEIN P21, C-H-RAS, P21RAS, COMPND 6 GTPASE HRAS, N-TERMINALLY PROCESSED; COMPND 7 EC: 3.6.5.2; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HRAS, HRAS1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PROEX HTB KEYWDS GTPASE, ACTIVATING MUTANT, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.M.OSTREM,U.PETERS,M.L.SOS,J.A.WELLS,K.M.SHOKAT REVDAT 4 20-SEP-23 4L9S 1 REMARK SEQADV LINK REVDAT 3 15-NOV-17 4L9S 1 REMARK REVDAT 2 18-DEC-13 4L9S 1 JRNL REVDAT 1 27-NOV-13 4L9S 0 JRNL AUTH J.M.OSTREM,U.PETERS,M.L.SOS,J.A.WELLS,K.M.SHOKAT JRNL TITL K-RAS(G12C) INHIBITORS ALLOSTERICALLY CONTROL GTP AFFINITY JRNL TITL 2 AND EFFECTOR INTERACTIONS. JRNL REF NATURE V. 503 548 2013 JRNL REFN ISSN 0028-0836 JRNL PMID 24256730 JRNL DOI 10.1038/NATURE12796 REMARK 2 REMARK 2 RESOLUTION. 1.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1402 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 26375 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.173 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.520 REMARK 3 FREE R VALUE TEST SET COUNT : 1983 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 21.5069 - 3.8632 0.97 1787 141 0.1492 0.1622 REMARK 3 2 3.8632 - 3.0692 1.00 1764 149 0.1480 0.1541 REMARK 3 3 3.0692 - 2.6821 1.00 1774 138 0.1659 0.1924 REMARK 3 4 2.6821 - 2.4372 1.00 1744 143 0.1497 0.1856 REMARK 3 5 2.4372 - 2.2627 1.00 1756 146 0.1480 0.1652 REMARK 3 6 2.2627 - 2.1295 1.00 1774 133 0.1467 0.1704 REMARK 3 7 2.1295 - 2.0229 1.00 1730 141 0.1609 0.1774 REMARK 3 8 2.0229 - 1.9349 1.00 1728 146 0.1498 0.1611 REMARK 3 9 1.9349 - 1.8605 1.00 1748 137 0.1544 0.1871 REMARK 3 10 1.8605 - 1.7963 1.00 1726 146 0.1711 0.1808 REMARK 3 11 1.7963 - 1.7401 1.00 1731 142 0.1683 0.1938 REMARK 3 12 1.7401 - 1.6904 1.00 1722 142 0.1755 0.2162 REMARK 3 13 1.6904 - 1.6459 1.00 1726 139 0.1925 0.2136 REMARK 3 14 1.6459 - 1.6060 0.97 1682 140 0.1883 0.2089 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.100 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.250 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 1319 REMARK 3 ANGLE : 1.303 1791 REMARK 3 CHIRALITY : 0.066 203 REMARK 3 PLANARITY : 0.006 230 REMARK 3 DIHEDRAL : 15.977 497 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.9793 -8.8043 -4.6684 REMARK 3 T TENSOR REMARK 3 T11: 0.2337 T22: 0.1757 REMARK 3 T33: 0.1398 T12: 0.0278 REMARK 3 T13: 0.0350 T23: -0.0352 REMARK 3 L TENSOR REMARK 3 L11: 4.3632 L22: 3.1058 REMARK 3 L33: 2.0748 L12: -1.5149 REMARK 3 L13: 0.2724 L23: 0.0567 REMARK 3 S TENSOR REMARK 3 S11: -0.0064 S12: -0.3068 S13: 0.3529 REMARK 3 S21: 0.3532 S22: 0.0042 S23: 0.2294 REMARK 3 S31: -0.2040 S32: -0.2478 S33: -0.0124 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 26 THROUGH 37 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.6621 -6.2476 0.8581 REMARK 3 T TENSOR REMARK 3 T11: 0.4554 T22: 0.3504 REMARK 3 T33: 0.2742 T12: 0.0551 REMARK 3 T13: -0.0527 T23: -0.1260 REMARK 3 L TENSOR REMARK 3 L11: 4.3458 L22: 8.8281 REMARK 3 L33: 4.4145 L12: 2.5811 REMARK 3 L13: -1.5034 L23: -3.3692 REMARK 3 S TENSOR REMARK 3 S11: -0.1647 S12: -0.7715 S13: 0.3385 REMARK 3 S21: 0.5774 S22: 0.0989 S23: -0.0866 REMARK 3 S31: -0.2016 S32: 0.2631 S33: 0.0751 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 38 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.3768 -2.2997 -6.9743 REMARK 3 T TENSOR REMARK 3 T11: 0.3299 T22: 0.2330 REMARK 3 T33: 0.2354 T12: -0.0009 REMARK 3 T13: 0.0119 T23: -0.0483 REMARK 3 L TENSOR REMARK 3 L11: 6.6370 L22: 3.6530 REMARK 3 L33: 7.4036 L12: -3.9387 REMARK 3 L13: 6.1438 L23: -4.8367 REMARK 3 S TENSOR REMARK 3 S11: -0.3828 S12: -0.7157 S13: 0.4118 REMARK 3 S21: 0.3489 S22: 0.1289 S23: 0.0384 REMARK 3 S31: -0.1377 S32: -0.8213 S33: 0.2531 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.5367 -10.4705 -0.9171 REMARK 3 T TENSOR REMARK 3 T11: 0.3489 T22: 0.2597 REMARK 3 T33: 0.2646 T12: 0.0211 REMARK 3 T13: 0.0956 T23: -0.0000 REMARK 3 L TENSOR REMARK 3 L11: 3.7013 L22: 6.0888 REMARK 3 L33: 6.0376 L12: -3.0646 REMARK 3 L13: 4.4067 L23: -2.0952 REMARK 3 S TENSOR REMARK 3 S11: -0.0939 S12: -0.3984 S13: -0.1477 REMARK 3 S21: 0.8737 S22: 0.2353 S23: 0.4063 REMARK 3 S31: -0.0101 S32: -0.1455 S33: -0.2561 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 69 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.8649 -17.3414 1.0734 REMARK 3 T TENSOR REMARK 3 T11: 0.6598 T22: 0.6728 REMARK 3 T33: 0.5528 T12: -0.0998 REMARK 3 T13: 0.1869 T23: 0.1397 REMARK 3 L TENSOR REMARK 3 L11: 5.3508 L22: 3.1594 REMARK 3 L33: 4.8080 L12: -1.6478 REMARK 3 L13: 2.6618 L23: -0.1608 REMARK 3 S TENSOR REMARK 3 S11: -0.1261 S12: -1.8300 S13: -0.3227 REMARK 3 S21: 1.6759 S22: -0.1956 S23: 0.6324 REMARK 3 S31: 0.4093 S32: -0.8272 S33: -0.0879 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 77 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.2252 -22.9006 -8.0903 REMARK 3 T TENSOR REMARK 3 T11: 0.1714 T22: 0.1455 REMARK 3 T33: 0.1611 T12: -0.0122 REMARK 3 T13: 0.0289 T23: 0.0151 REMARK 3 L TENSOR REMARK 3 L11: 5.2838 L22: 2.1401 REMARK 3 L33: 2.0809 L12: 0.9063 REMARK 3 L13: -1.0413 L23: -0.3769 REMARK 3 S TENSOR REMARK 3 S11: -0.0778 S12: -0.1548 S13: -0.3818 REMARK 3 S21: 0.1421 S22: 0.0464 S23: 0.2497 REMARK 3 S31: 0.1826 S32: -0.1601 S33: 0.0417 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 117 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.7260 -14.8038 -16.2040 REMARK 3 T TENSOR REMARK 3 T11: 0.1856 T22: 0.1812 REMARK 3 T33: 0.1168 T12: -0.0096 REMARK 3 T13: -0.0039 T23: 0.0054 REMARK 3 L TENSOR REMARK 3 L11: 5.0609 L22: 2.7893 REMARK 3 L33: 1.3162 L12: -0.5388 REMARK 3 L13: -0.1872 L23: -0.5008 REMARK 3 S TENSOR REMARK 3 S11: -0.0593 S12: 0.2988 S13: 0.0605 REMARK 3 S21: -0.0779 S22: 0.0730 S23: 0.0821 REMARK 3 S31: -0.0496 S32: 0.0182 S33: -0.0099 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4L9S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1000080360. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JAN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1159 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL, SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26379 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.606 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.61 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 0.38400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.4 REMARK 200 STARTING MODEL: PDB ENTRY 3GFT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 17% PEG8000, 0.1M CACL2, 0.1M TRIS, PH REMARK 280 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 46.36250 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 26.76740 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 40.63233 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 46.36250 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 26.76740 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 40.63233 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 46.36250 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 26.76740 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 40.63233 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 46.36250 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 26.76740 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 40.63233 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 46.36250 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 26.76740 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 40.63233 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 46.36250 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 26.76740 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 40.63233 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 53.53480 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 81.26467 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 53.53480 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 81.26467 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 53.53480 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 81.26467 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 53.53480 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 81.26467 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 53.53480 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 81.26467 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 53.53480 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 81.26467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CA CA A 203 LIES ON A SPECIAL POSITION. REMARK 375 CA CA A 204 LIES ON A SPECIAL POSITION. REMARK 375 NA NA A 205 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 369 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 375 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 376 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 391 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 394 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 448 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 449 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 461 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 466 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 ALA A -3 REMARK 465 MET A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 GLN A 61 REMARK 465 GLU A 62 REMARK 465 GLU A 63 REMARK 465 TYR A 64 REMARK 465 SER A 65 REMARK 465 ALA A 66 REMARK 465 MET A 67 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 31 CG CD OE1 OE2 REMARK 470 GLN A 70 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE21 GLN A 165 O HOH A 447 1.54 REMARK 500 O HOH A 447 O HOH A 462 1.89 REMARK 500 SG CYS A 118 O HOH A 399 1.98 REMARK 500 OE1 GLU A 126 O HOH A 422 2.07 REMARK 500 O HOH A 354 O HOH A 451 2.13 REMARK 500 OE2 GLU A 126 O HOH A 450 2.16 REMARK 500 NE2 GLN A 165 O HOH A 447 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 360 O HOH A 360 16544 1.55 REMARK 500 O HOH A 303 O HOH A 400 3655 2.06 REMARK 500 O HOH A 390 O HOH A 395 3655 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 31 67.78 -155.70 REMARK 500 ARG A 149 -4.51 81.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 17 OG REMARK 620 2 GDP A 201 O1B 91.3 REMARK 620 3 HOH A 337 O 81.1 92.6 REMARK 620 4 HOH A 344 O 93.1 86.5 174.0 REMARK 620 5 HOH A 346 O 172.7 88.0 91.7 94.2 REMARK 620 6 HOH A 348 O 91.2 171.7 95.6 85.5 90.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 203 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG A 102 O REMARK 620 2 ASP A 105 OD1 95.4 REMARK 620 3 ASP A 105 OD2 86.2 56.1 REMARK 620 4 HOH A 461 O 95.5 91.8 147.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 204 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 103 O REMARK 620 2 ASP A 105 OD2 87.6 REMARK 620 3 HOH A 465 O 95.8 81.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 206 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 138 O REMARK 620 2 HOH A 365 O 97.7 REMARK 620 3 HOH A 366 O 84.5 77.0 REMARK 620 4 HOH A 383 O 133.6 89.4 141.3 REMARK 620 5 HOH A 423 O 85.3 174.0 98.1 92.3 REMARK 620 6 HOH A 455 O 145.7 87.3 63.4 80.1 87.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 205 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 306 O REMARK 620 2 HOH A 338 O 75.8 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 206 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4L8G RELATED DB: PDB REMARK 900 RELATED ID: 4L9W RELATED DB: PDB REMARK 900 RELATED ID: 4LPK RELATED DB: PDB REMARK 900 RELATED ID: 4LRW RELATED DB: PDB REMARK 900 RELATED ID: 4LUC RELATED DB: PDB REMARK 900 RELATED ID: 4LV6 RELATED DB: PDB REMARK 900 RELATED ID: 4LYF RELATED DB: PDB REMARK 900 RELATED ID: 4LYH RELATED DB: PDB REMARK 900 RELATED ID: 4LYJ RELATED DB: PDB REMARK 900 RELATED ID: 4M1O RELATED DB: PDB REMARK 900 RELATED ID: 4M1S RELATED DB: PDB REMARK 900 RELATED ID: 4M1T RELATED DB: PDB REMARK 900 RELATED ID: 4M1W RELATED DB: PDB REMARK 900 RELATED ID: 4M1Y RELATED DB: PDB REMARK 900 RELATED ID: 4M21 RELATED DB: PDB REMARK 900 RELATED ID: 4M22 RELATED DB: PDB DBREF 4L9S A 1 166 UNP P01112 RASH_HUMAN 1 166 SEQADV 4L9S GLY A -4 UNP P01112 EXPRESSION TAG SEQADV 4L9S ALA A -3 UNP P01112 EXPRESSION TAG SEQADV 4L9S MET A -2 UNP P01112 EXPRESSION TAG SEQADV 4L9S GLY A -1 UNP P01112 EXPRESSION TAG SEQADV 4L9S SER A 0 UNP P01112 EXPRESSION TAG SEQADV 4L9S CYS A 12 UNP P01112 GLY 12 ENGINEERED MUTATION SEQRES 1 A 171 GLY ALA MET GLY SER MET THR GLU TYR LYS LEU VAL VAL SEQRES 2 A 171 VAL GLY ALA CYS GLY VAL GLY LYS SER ALA LEU THR ILE SEQRES 3 A 171 GLN LEU ILE GLN ASN HIS PHE VAL ASP GLU TYR ASP PRO SEQRES 4 A 171 THR ILE GLU ASP SER TYR ARG LYS GLN VAL VAL ILE ASP SEQRES 5 A 171 GLY GLU THR CYS LEU LEU ASP ILE LEU ASP THR ALA GLY SEQRES 6 A 171 GLN GLU GLU TYR SER ALA MET ARG ASP GLN TYR MET ARG SEQRES 7 A 171 THR GLY GLU GLY PHE LEU CYS VAL PHE ALA ILE ASN ASN SEQRES 8 A 171 THR LYS SER PHE GLU ASP ILE HIS GLN TYR ARG GLU GLN SEQRES 9 A 171 ILE LYS ARG VAL LYS ASP SER ASP ASP VAL PRO MET VAL SEQRES 10 A 171 LEU VAL GLY ASN LYS CYS ASP LEU ALA ALA ARG THR VAL SEQRES 11 A 171 GLU SER ARG GLN ALA GLN ASP LEU ALA ARG SER TYR GLY SEQRES 12 A 171 ILE PRO TYR ILE GLU THR SER ALA LYS THR ARG GLN GLY SEQRES 13 A 171 VAL GLU ASP ALA PHE TYR THR LEU VAL ARG GLU ILE ARG SEQRES 14 A 171 GLN HIS HET GDP A 201 37 HET MG A 202 1 HET CA A 203 1 HET CA A 204 1 HET NA A 205 1 HET NA A 206 1 HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM CA CALCIUM ION HETNAM NA SODIUM ION FORMUL 2 GDP C10 H15 N5 O11 P2 FORMUL 3 MG MG 2+ FORMUL 4 CA 2(CA 2+) FORMUL 6 NA 2(NA 1+) FORMUL 8 HOH *167(H2 O) HELIX 1 1 GLY A 15 ASN A 26 1 12 HELIX 2 2 ASP A 69 GLY A 75 1 7 HELIX 3 3 ASN A 86 ASP A 92 1 7 HELIX 4 4 ASP A 92 ASP A 105 1 14 HELIX 5 5 GLU A 126 GLY A 138 1 13 HELIX 6 6 GLY A 151 HIS A 166 1 16 SHEET 1 A 6 ASP A 38 ILE A 46 0 SHEET 2 A 6 GLU A 49 ASP A 57 -1 O CYS A 51 N VAL A 44 SHEET 3 A 6 THR A 2 GLY A 10 1 N VAL A 8 O LEU A 56 SHEET 4 A 6 GLY A 77 ALA A 83 1 O VAL A 81 N VAL A 9 SHEET 5 A 6 MET A 111 ASN A 116 1 O ASN A 116 N PHE A 82 SHEET 6 A 6 TYR A 141 GLU A 143 1 O ILE A 142 N LEU A 113 LINK OG SER A 17 MG MG A 202 1555 1555 2.18 LINK O ARG A 102 CA CA A 203 1555 1555 2.25 LINK O VAL A 103 CA CA A 204 1555 1555 2.30 LINK OD1AASP A 105 CA CA A 203 1555 1555 2.16 LINK OD2AASP A 105 CA CA A 203 1555 1555 2.50 LINK OD2AASP A 105 CA CA A 204 1555 1555 2.39 LINK O GLY A 138 NA NA A 206 1555 1555 2.37 LINK O1B GDP A 201 MG MG A 202 1555 1555 2.13 LINK MG MG A 202 O HOH A 337 1555 1555 2.13 LINK MG MG A 202 O HOH A 344 1555 1555 2.30 LINK MG MG A 202 O HOH A 346 1555 1555 2.10 LINK MG MG A 202 O HOH A 348 1555 1555 2.21 LINK CA CA A 203 O HOH A 461 1555 1555 2.25 LINK CA CA A 204 O HOH A 465 1555 1555 2.34 LINK NA NA A 205 O HOH A 306 1555 1555 2.63 LINK NA NA A 205 O HOH A 338 1555 1555 2.57 LINK NA NA A 206 O HOH A 365 1555 1555 2.31 LINK NA NA A 206 O HOH A 366 1555 1555 2.55 LINK NA NA A 206 O HOH A 383 1555 1555 2.39 LINK NA NA A 206 O HOH A 423 1555 1555 2.29 LINK NA NA A 206 O HOH A 455 1555 1555 2.65 SITE 1 AC1 24 GLY A 13 VAL A 14 GLY A 15 LYS A 16 SITE 2 AC1 24 SER A 17 ALA A 18 PHE A 28 VAL A 29 SITE 3 AC1 24 ASP A 30 ASN A 116 LYS A 117 ASP A 119 SITE 4 AC1 24 LEU A 120 SER A 145 ALA A 146 LYS A 147 SITE 5 AC1 24 MG A 202 HOH A 334 HOH A 337 HOH A 344 SITE 6 AC1 24 HOH A 346 HOH A 378 HOH A 384 HOH A 396 SITE 1 AC2 6 SER A 17 GDP A 201 HOH A 337 HOH A 344 SITE 2 AC2 6 HOH A 346 HOH A 348 SITE 1 AC3 3 ARG A 102 ASP A 105 HOH A 461 SITE 1 AC4 3 VAL A 103 ASP A 105 HOH A 465 SITE 1 AC5 2 HOH A 306 HOH A 338 SITE 1 AC6 6 GLY A 138 HOH A 365 HOH A 366 HOH A 383 SITE 2 AC6 6 HOH A 423 HOH A 455 CRYST1 92.725 92.725 121.897 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010785 0.006226 0.000000 0.00000 SCALE2 0.000000 0.012453 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008204 0.00000