HEADER LIGASE/PROTEIN BINDING 21-JUN-13 4LCD TITLE STRUCTURE OF AN RSP5XUBXSNA3 COMPLEX: MECHANISM OF UBIQUITIN LIGATION TITLE 2 AND LYSINE PRIORITIZATION BY A HECT E3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE RSP5; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: WW3 + HECT (UNP RESIDUES 383-809); COMPND 5 SYNONYM: REVERSES SPT-PHENOTYPE PROTEIN 5; COMPND 6 EC: 6.3.2.-; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: PROTEIN SNA3; COMPND 11 CHAIN: C, D; COMPND 12 FRAGMENT: CYTOSOLIC FRAGMENT (UNP RESIDUES 104-127); COMPND 13 ENGINEERED: YES; COMPND 14 MUTATION: YES; COMPND 15 MOL_ID: 3; COMPND 16 MOLECULE: UBIQUITIN; COMPND 17 CHAIN: E, F; COMPND 18 FRAGMENT: UNP RESIDUES 1-75; COMPND 19 ENGINEERED: YES; COMPND 20 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 STRAIN: ATCC 204508 / S288C; SOURCE 6 GENE: MDP1, NPI1, RSP5, SYGP-ORF41, YER125W; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX4T1; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 14 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 15 ORGANISM_TAXID: 559292; SOURCE 16 MOL_ID: 3; SOURCE 17 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 18 ORGANISM_COMMON: HUMAN; SOURCE 19 ORGANISM_TAXID: 9606; SOURCE 20 GENE: UBC, UBIQUITIN; SOURCE 21 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 23 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 24 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS LIGASE, E3, RSP5, NEDD4, UBIQUITIN, HECT, SNA3, THIOESTER, MALEIMIDE, KEYWDS 2 CROSSLINK, LIGASE-PROTEIN BINDING COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR H.B.KAMADURAI,D.MILLER,B.A.SCHULMAN REVDAT 3 28-FEB-24 4LCD 1 SEQADV REVDAT 2 28-AUG-13 4LCD 1 JRNL REVDAT 1 14-AUG-13 4LCD 0 JRNL AUTH H.B.KAMADURAI,Y.QIU,A.DENG,J.S.HARRISON,C.MACDONALD,M.ACTIS, JRNL AUTH 2 P.RODRIGUES,D.J.MILLER,J.SOUPHRON,S.M.LEWIS,I.KURINOV, JRNL AUTH 3 N.FUJII,M.HAMMEL,R.PIPER,B.KUHLMAN,B.A.SCHULMAN JRNL TITL MECHANISM OF UBIQUITIN LIGATION AND LYSINE PRIORITIZATION BY JRNL TITL 2 A HECT E3. JRNL REF ELIFE V. 2 00828 2013 JRNL REFN ESSN 2050-084X JRNL PMID 23936628 JRNL DOI 10.7554/ELIFE.00828 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 3 NUMBER OF REFLECTIONS : 21323 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.253 REMARK 3 R VALUE (WORKING SET) : 0.251 REMARK 3 FREE R VALUE : 0.299 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1088 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.3968 - 6.1833 0.92 2509 133 0.2213 0.2690 REMARK 3 2 6.1833 - 4.9153 0.92 2463 139 0.2560 0.3068 REMARK 3 3 4.9153 - 4.2962 0.96 2560 151 0.2283 0.2597 REMARK 3 4 4.2962 - 3.9043 0.92 2451 121 0.2469 0.3017 REMARK 3 5 3.9043 - 3.6250 0.96 2559 119 0.2619 0.3648 REMARK 3 6 3.6250 - 3.4116 0.98 2589 127 0.2832 0.2965 REMARK 3 7 3.4116 - 3.2410 0.98 2589 138 0.2998 0.3468 REMARK 3 8 3.2410 - 3.1000 0.96 2515 160 0.3120 0.3655 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.86 REMARK 3 K_SOL : 0.31 REMARK 3 B_SOL : 49.40 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.500 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.500 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 26.43550 REMARK 3 B22 (A**2) : -25.33520 REMARK 3 B33 (A**2) : -1.10040 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 7.44340 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 8125 REMARK 3 ANGLE : 1.043 11020 REMARK 3 CHIRALITY : 0.064 1200 REMARK 3 PLANARITY : 0.005 1445 REMARK 3 DIHEDRAL : 22.768 4929 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 26 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 383:429) REMARK 3 ORIGIN FOR THE GROUP (A): 32.0998 14.8546 -45.3110 REMARK 3 T TENSOR REMARK 3 T11: 0.7605 T22: 0.8663 REMARK 3 T33: 0.9382 T12: -0.0797 REMARK 3 T13: 0.1885 T23: -0.0882 REMARK 3 L TENSOR REMARK 3 L11: 5.2715 L22: 2.0557 REMARK 3 L33: 1.8637 L12: -1.1245 REMARK 3 L13: 0.1134 L23: 2.1093 REMARK 3 S TENSOR REMARK 3 S11: -0.1856 S12: 0.3399 S13: -0.3479 REMARK 3 S21: -0.0375 S22: 0.6471 S23: -0.5874 REMARK 3 S31: -0.3434 S32: 0.4572 S33: -0.2885 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 430:511) REMARK 3 ORIGIN FOR THE GROUP (A): 17.4685 33.8688 -48.8044 REMARK 3 T TENSOR REMARK 3 T11: 0.5242 T22: 0.6669 REMARK 3 T33: 0.5650 T12: -0.0097 REMARK 3 T13: 0.1212 T23: -0.0315 REMARK 3 L TENSOR REMARK 3 L11: 1.7256 L22: 5.3025 REMARK 3 L33: 0.8217 L12: -0.2327 REMARK 3 L13: 0.3205 L23: -0.5795 REMARK 3 S TENSOR REMARK 3 S11: -0.0107 S12: 0.3547 S13: 0.1576 REMARK 3 S21: -0.1661 S22: -0.2145 S23: -0.9138 REMARK 3 S31: 0.2166 S32: 0.1915 S33: 0.1345 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 512:575) REMARK 3 ORIGIN FOR THE GROUP (A): 4.7227 37.3990 -41.0586 REMARK 3 T TENSOR REMARK 3 T11: 0.3716 T22: 0.4556 REMARK 3 T33: 0.4537 T12: -0.0384 REMARK 3 T13: 0.0186 T23: -0.0145 REMARK 3 L TENSOR REMARK 3 L11: 3.3193 L22: 5.1436 REMARK 3 L33: 2.5591 L12: -0.7446 REMARK 3 L13: -1.8487 L23: -1.2078 REMARK 3 S TENSOR REMARK 3 S11: 0.0253 S12: -0.0974 S13: 0.2427 REMARK 3 S21: 0.7431 S22: 0.1674 S23: -0.0866 REMARK 3 S31: -0.3495 S32: 0.0214 S33: -0.1776 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 576:625) REMARK 3 ORIGIN FOR THE GROUP (A): -14.5674 30.9851 -31.1010 REMARK 3 T TENSOR REMARK 3 T11: 0.9907 T22: 0.9086 REMARK 3 T33: 1.2298 T12: 0.0496 REMARK 3 T13: 0.3332 T23: 0.2315 REMARK 3 L TENSOR REMARK 3 L11: 2.8458 L22: 2.8081 REMARK 3 L33: 0.6012 L12: -1.5051 REMARK 3 L13: -1.0620 L23: 0.4371 REMARK 3 S TENSOR REMARK 3 S11: 0.3130 S12: -0.2773 S13: -0.1330 REMARK 3 S21: 0.6894 S22: 0.2717 S23: 1.5527 REMARK 3 S31: -0.7881 S32: -0.0681 S33: -0.3917 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 626:695) REMARK 3 ORIGIN FOR THE GROUP (A): -4.5859 27.6311 -40.6678 REMARK 3 T TENSOR REMARK 3 T11: 0.5031 T22: 0.6107 REMARK 3 T33: 0.5803 T12: 0.0182 REMARK 3 T13: 0.0585 T23: -0.0366 REMARK 3 L TENSOR REMARK 3 L11: 4.4966 L22: 4.2974 REMARK 3 L33: 0.9395 L12: 0.6092 REMARK 3 L13: -1.3235 L23: -2.2552 REMARK 3 S TENSOR REMARK 3 S11: -0.2199 S12: 0.1041 S13: -0.0763 REMARK 3 S21: -0.1660 S22: 0.4208 S23: 0.8660 REMARK 3 S31: 0.4709 S32: -0.3928 S33: -0.0993 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 696:806) REMARK 3 ORIGIN FOR THE GROUP (A): 32.6575 35.5578 -28.6129 REMARK 3 T TENSOR REMARK 3 T11: 0.5654 T22: 0.7100 REMARK 3 T33: 0.7505 T12: 0.0329 REMARK 3 T13: -0.0967 T23: -0.0516 REMARK 3 L TENSOR REMARK 3 L11: 4.7722 L22: 4.2257 REMARK 3 L33: 2.8726 L12: 0.4650 REMARK 3 L13: 1.4247 L23: -1.3098 REMARK 3 S TENSOR REMARK 3 S11: -0.0233 S12: -0.6063 S13: 0.1870 REMARK 3 S21: 0.1603 S22: 0.0515 S23: -0.6293 REMARK 3 S31: -0.1409 S32: 0.3762 S33: -0.0653 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 384:473) REMARK 3 ORIGIN FOR THE GROUP (A): 12.9687 8.1562 6.1542 REMARK 3 T TENSOR REMARK 3 T11: 0.7900 T22: 0.5907 REMARK 3 T33: 0.5826 T12: 0.0584 REMARK 3 T13: -0.1773 T23: -0.0698 REMARK 3 L TENSOR REMARK 3 L11: 3.0776 L22: 2.5447 REMARK 3 L33: 0.1033 L12: -0.3539 REMARK 3 L13: 0.3338 L23: -0.0780 REMARK 3 S TENSOR REMARK 3 S11: 0.0715 S12: -0.3895 S13: 0.3327 REMARK 3 S21: 0.3121 S22: -0.0899 S23: -0.7441 REMARK 3 S31: 0.0815 S32: 0.1173 S33: -0.0462 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 474:557) REMARK 3 ORIGIN FOR THE GROUP (A): 0.9948 -8.3710 -2.2336 REMARK 3 T TENSOR REMARK 3 T11: 0.5860 T22: 0.4305 REMARK 3 T33: 0.4838 T12: 0.0306 REMARK 3 T13: -0.0614 T23: -0.0020 REMARK 3 L TENSOR REMARK 3 L11: 4.4623 L22: 4.9852 REMARK 3 L33: 2.8979 L12: -0.0987 REMARK 3 L13: -0.5742 L23: 0.4782 REMARK 3 S TENSOR REMARK 3 S11: -0.1125 S12: -0.0271 S13: -0.2908 REMARK 3 S21: -0.0228 S22: 0.0400 S23: -0.3403 REMARK 3 S31: -0.0730 S32: 0.2453 S33: 0.0602 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 558:632) REMARK 3 ORIGIN FOR THE GROUP (A): -10.6275 0.9605 -19.7457 REMARK 3 T TENSOR REMARK 3 T11: 1.0975 T22: 0.7622 REMARK 3 T33: 0.6597 T12: 0.0106 REMARK 3 T13: -0.0993 T23: 0.0268 REMARK 3 L TENSOR REMARK 3 L11: 2.4509 L22: 3.1008 REMARK 3 L33: 3.0377 L12: -0.2918 REMARK 3 L13: 1.7214 L23: -1.6151 REMARK 3 S TENSOR REMARK 3 S11: -0.1743 S12: 0.5741 S13: -0.0974 REMARK 3 S21: -0.7822 S22: 0.4331 S23: 0.6683 REMARK 3 S31: 0.2836 S32: 0.0406 S33: -0.2460 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 633:680) REMARK 3 ORIGIN FOR THE GROUP (A): -12.8291 3.4437 -12.0324 REMARK 3 T TENSOR REMARK 3 T11: 0.9418 T22: 0.5825 REMARK 3 T33: 0.6807 T12: 0.0351 REMARK 3 T13: -0.0452 T23: -0.0108 REMARK 3 L TENSOR REMARK 3 L11: 1.9352 L22: 3.5022 REMARK 3 L33: 1.9465 L12: -0.2378 REMARK 3 L13: -0.4063 L23: -1.6932 REMARK 3 S TENSOR REMARK 3 S11: -0.0634 S12: -0.1175 S13: 0.1524 REMARK 3 S21: -0.3104 S22: 0.3767 S23: 0.8504 REMARK 3 S31: -0.6923 S32: -0.5615 S33: -0.0761 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 681:806) REMARK 3 ORIGIN FOR THE GROUP (A): 26.2209 -2.9365 -6.1502 REMARK 3 T TENSOR REMARK 3 T11: 0.9320 T22: 0.7633 REMARK 3 T33: 0.8280 T12: -0.0324 REMARK 3 T13: 0.1601 T23: -0.1472 REMARK 3 L TENSOR REMARK 3 L11: 4.7511 L22: 2.0305 REMARK 3 L33: 1.2625 L12: -1.3725 REMARK 3 L13: -0.0848 L23: -0.5580 REMARK 3 S TENSOR REMARK 3 S11: -0.3222 S12: 0.0802 S13: -0.1310 REMARK 3 S21: -0.4018 S22: 0.1621 S23: -0.5841 REMARK 3 S31: 0.1796 S32: 0.4317 S33: 0.0302 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN C AND (RESSEQ 105:112) REMARK 3 ORIGIN FOR THE GROUP (A): 44.0889 13.3397 -42.5946 REMARK 3 T TENSOR REMARK 3 T11: 0.7612 T22: 1.3203 REMARK 3 T33: 1.4296 T12: 0.2270 REMARK 3 T13: 0.1204 T23: 0.0898 REMARK 3 L TENSOR REMARK 3 L11: 9.8127 L22: 5.9845 REMARK 3 L33: 1.9665 L12: -0.3222 REMARK 3 L13: -5.6441 L23: 0.2367 REMARK 3 S TENSOR REMARK 3 S11: -2.5418 S12: 0.4766 S13: -1.2177 REMARK 3 S21: 0.1303 S22: -0.8973 S23: -0.3736 REMARK 3 S31: 0.5243 S32: 2.3309 S33: 2.5541 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN D AND (RESSEQ 104:117) REMARK 3 ORIGIN FOR THE GROUP (A): 32.3972 16.8650 13.0303 REMARK 3 T TENSOR REMARK 3 T11: 1.5318 T22: 1.5592 REMARK 3 T33: 1.8795 T12: -0.1402 REMARK 3 T13: -0.3590 T23: 0.1526 REMARK 3 L TENSOR REMARK 3 L11: -0.0494 L22: 0.0122 REMARK 3 L33: -0.0424 L12: -0.1296 REMARK 3 L13: -0.1369 L23: 0.0038 REMARK 3 S TENSOR REMARK 3 S11: -0.1524 S12: -0.2929 S13: -0.2807 REMARK 3 S21: 1.1551 S22: -0.6516 S23: -0.4843 REMARK 3 S31: 0.3604 S32: 1.8136 S33: -0.0000 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN E AND (RESSEQ 1:6) REMARK 3 ORIGIN FOR THE GROUP (A): 29.3907 68.1771 -29.9695 REMARK 3 T TENSOR REMARK 3 T11: 1.1382 T22: 1.2915 REMARK 3 T33: 0.9648 T12: -0.1513 REMARK 3 T13: -0.2570 T23: -0.0048 REMARK 3 L TENSOR REMARK 3 L11: 4.2014 L22: 5.6786 REMARK 3 L33: 2.4191 L12: 2.4805 REMARK 3 L13: 0.1242 L23: 1.8574 REMARK 3 S TENSOR REMARK 3 S11: -0.0527 S12: 0.1544 S13: 1.3742 REMARK 3 S21: -0.0642 S22: -1.4831 S23: 0.7306 REMARK 3 S31: -0.7952 S32: -0.2059 S33: 1.2692 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN E AND (RESSEQ 7:22) REMARK 3 ORIGIN FOR THE GROUP (A): 32.9952 65.9863 -29.8310 REMARK 3 T TENSOR REMARK 3 T11: 1.3818 T22: 1.2035 REMARK 3 T33: 1.3305 T12: -0.3133 REMARK 3 T13: -0.1979 T23: 0.1477 REMARK 3 L TENSOR REMARK 3 L11: 0.0588 L22: 0.6366 REMARK 3 L33: 0.4730 L12: -0.1358 REMARK 3 L13: -0.0139 L23: 0.5837 REMARK 3 S TENSOR REMARK 3 S11: 0.0899 S12: -0.5470 S13: 1.2063 REMARK 3 S21: 0.6633 S22: -0.4734 S23: -0.4906 REMARK 3 S31: -0.6404 S32: 0.8370 S33: -0.2544 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN E AND (RESSEQ 23:34) REMARK 3 ORIGIN FOR THE GROUP (A): 39.6556 61.2162 -29.7234 REMARK 3 T TENSOR REMARK 3 T11: 0.8984 T22: 1.2471 REMARK 3 T33: 1.5855 T12: -0.1863 REMARK 3 T13: -0.5618 T23: -0.2394 REMARK 3 L TENSOR REMARK 3 L11: 1.2578 L22: 2.1224 REMARK 3 L33: 5.2101 L12: -1.6132 REMARK 3 L13: 0.0379 L23: -0.2462 REMARK 3 S TENSOR REMARK 3 S11: 0.7243 S12: -0.8344 S13: 1.5187 REMARK 3 S21: -0.4800 S22: -0.8823 S23: 0.2352 REMARK 3 S31: -0.0892 S32: 1.3110 S33: -0.6084 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN E AND (RESSEQ 35:49) REMARK 3 ORIGIN FOR THE GROUP (A): 34.7331 58.0498 -37.2538 REMARK 3 T TENSOR REMARK 3 T11: 0.7277 T22: 0.9600 REMARK 3 T33: 1.6723 T12: -0.3032 REMARK 3 T13: -0.2836 T23: -0.2083 REMARK 3 L TENSOR REMARK 3 L11: 2.6024 L22: 2.3686 REMARK 3 L33: 2.7908 L12: -2.2374 REMARK 3 L13: 0.9976 L23: -1.0669 REMARK 3 S TENSOR REMARK 3 S11: 1.0190 S12: 0.2004 S13: -0.3941 REMARK 3 S21: 0.3704 S22: -0.8056 S23: -2.5715 REMARK 3 S31: -1.0875 S32: 0.9297 S33: 0.5783 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN E AND (RESSEQ 50:64) REMARK 3 ORIGIN FOR THE GROUP (A): 34.5952 70.7204 -39.5919 REMARK 3 T TENSOR REMARK 3 T11: 1.6238 T22: 1.0285 REMARK 3 T33: 1.4431 T12: 0.2022 REMARK 3 T13: -0.1761 T23: -0.0432 REMARK 3 L TENSOR REMARK 3 L11: 0.6745 L22: 4.5198 REMARK 3 L33: 0.2649 L12: -0.9634 REMARK 3 L13: 0.2789 L23: 0.3809 REMARK 3 S TENSOR REMARK 3 S11: 0.1996 S12: 0.3805 S13: 0.2817 REMARK 3 S21: -1.0772 S22: -0.4496 S23: -0.7953 REMARK 3 S31: 0.3409 S32: -0.5930 S33: 0.5669 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN E AND (RESSEQ 65:75) REMARK 3 ORIGIN FOR THE GROUP (A): 30.9985 54.5827 -36.4393 REMARK 3 T TENSOR REMARK 3 T11: 0.8255 T22: 1.0526 REMARK 3 T33: 0.8417 T12: -0.1447 REMARK 3 T13: -0.1752 T23: 0.0539 REMARK 3 L TENSOR REMARK 3 L11: 1.8175 L22: 3.5276 REMARK 3 L33: 5.0476 L12: 1.6325 REMARK 3 L13: -1.0230 L23: -0.1645 REMARK 3 S TENSOR REMARK 3 S11: 0.5803 S12: 1.3779 S13: -0.1152 REMARK 3 S21: 0.3659 S22: -0.6875 S23: -1.4244 REMARK 3 S31: -0.7210 S32: 0.6274 S33: 0.2119 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN F AND (RESSEQ 1:7) REMARK 3 ORIGIN FOR THE GROUP (A): 25.3532 -35.5433 -6.7395 REMARK 3 T TENSOR REMARK 3 T11: 1.2521 T22: 1.5488 REMARK 3 T33: 1.1396 T12: 0.2240 REMARK 3 T13: 0.1761 T23: 0.0371 REMARK 3 L TENSOR REMARK 3 L11: 2.0791 L22: 0.4945 REMARK 3 L33: 2.0187 L12: -0.1316 REMARK 3 L13: -1.0186 L23: -2.6303 REMARK 3 S TENSOR REMARK 3 S11: -1.7459 S12: 0.3007 S13: -1.8808 REMARK 3 S21: -0.8809 S22: 0.6404 S23: -0.1216 REMARK 3 S31: 0.4733 S32: -0.6340 S33: 1.6678 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN F AND (RESSEQ 8:22) REMARK 3 ORIGIN FOR THE GROUP (A): 28.4700 -34.2462 -4.9283 REMARK 3 T TENSOR REMARK 3 T11: 1.0357 T22: 0.9554 REMARK 3 T33: 1.1582 T12: 0.0870 REMARK 3 T13: 0.4474 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 2.2033 L22: 1.2104 REMARK 3 L33: 4.1349 L12: 1.8281 REMARK 3 L13: 0.3395 L23: 1.3623 REMARK 3 S TENSOR REMARK 3 S11: 0.4198 S12: 0.3394 S13: 0.1159 REMARK 3 S21: -0.2468 S22: -0.4309 S23: -0.8666 REMARK 3 S31: -1.3464 S32: 0.2130 S33: -0.3747 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN F AND (RESSEQ 23:34) REMARK 3 ORIGIN FOR THE GROUP (A): 33.9679 -29.6301 -1.5950 REMARK 3 T TENSOR REMARK 3 T11: 0.4180 T22: 1.4408 REMARK 3 T33: 1.1171 T12: 0.3013 REMARK 3 T13: 0.0847 T23: 0.0248 REMARK 3 L TENSOR REMARK 3 L11: 3.2929 L22: 2.1491 REMARK 3 L33: 2.1380 L12: -0.3282 REMARK 3 L13: -1.7110 L23: 1.8281 REMARK 3 S TENSOR REMARK 3 S11: 0.1415 S12: -0.2253 S13: -0.3837 REMARK 3 S21: 0.7132 S22: 0.6033 S23: -1.0724 REMARK 3 S31: -1.1294 S32: 0.3752 S33: -0.5465 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN F AND (RESSEQ 35:40) REMARK 3 ORIGIN FOR THE GROUP (A): 33.1856 -21.5266 -0.1723 REMARK 3 T TENSOR REMARK 3 T11: 1.0492 T22: 1.0030 REMARK 3 T33: 1.8034 T12: 0.2009 REMARK 3 T13: -0.2401 T23: 0.1596 REMARK 3 L TENSOR REMARK 3 L11: 3.0760 L22: 1.3375 REMARK 3 L33: 3.4775 L12: -0.5197 REMARK 3 L13: 0.4827 L23: -0.9522 REMARK 3 S TENSOR REMARK 3 S11: 0.5872 S12: -0.5356 S13: 0.6547 REMARK 3 S21: 0.2968 S22: -0.7078 S23: -1.7797 REMARK 3 S31: -0.4673 S32: -0.0468 S33: 0.4731 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN F AND (RESSEQ 41:49) REMARK 3 ORIGIN FOR THE GROUP (A): 22.2005 -29.2663 3.8672 REMARK 3 T TENSOR REMARK 3 T11: 1.0568 T22: 1.1857 REMARK 3 T33: 1.4102 T12: 0.2717 REMARK 3 T13: -0.1613 T23: -0.1946 REMARK 3 L TENSOR REMARK 3 L11: 1.3524 L22: 7.2447 REMARK 3 L33: 2.9821 L12: 1.1220 REMARK 3 L13: 1.9733 L23: 0.7329 REMARK 3 S TENSOR REMARK 3 S11: -0.2390 S12: -0.1801 S13: -0.4428 REMARK 3 S21: -0.1978 S22: -0.5874 S23: -1.6196 REMARK 3 S31: 0.0908 S32: -0.4461 S33: 0.5738 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN F AND (RESSEQ 50:64) REMARK 3 ORIGIN FOR THE GROUP (A): 25.8255 -37.4551 5.5813 REMARK 3 T TENSOR REMARK 3 T11: 1.0255 T22: 1.2830 REMARK 3 T33: 1.2708 T12: 0.0138 REMARK 3 T13: -0.1897 T23: 0.0279 REMARK 3 L TENSOR REMARK 3 L11: 3.9417 L22: 5.8452 REMARK 3 L33: 1.2476 L12: 1.0064 REMARK 3 L13: 0.0407 L23: 1.5695 REMARK 3 S TENSOR REMARK 3 S11: -0.3521 S12: -0.4922 S13: -0.3689 REMARK 3 S21: 0.7135 S22: -0.6249 S23: -0.8910 REMARK 3 S31: -0.0712 S32: -0.6559 S33: 0.6016 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN F AND (RESSEQ 65:75) REMARK 3 ORIGIN FOR THE GROUP (A): 23.5418 -23.0862 -0.0641 REMARK 3 T TENSOR REMARK 3 T11: 0.6579 T22: 0.9478 REMARK 3 T33: 1.1747 T12: 0.0611 REMARK 3 T13: -0.0274 T23: -0.1681 REMARK 3 L TENSOR REMARK 3 L11: 4.8360 L22: 5.9678 REMARK 3 L33: 4.2318 L12: -1.5416 REMARK 3 L13: -0.4383 L23: -0.4194 REMARK 3 S TENSOR REMARK 3 S11: 1.0791 S12: -0.8887 S13: -0.6514 REMARK 3 S21: -0.1418 S22: -0.1750 S23: 0.3681 REMARK 3 S31: -0.2012 S32: 1.6498 S33: -0.5033 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4LCD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1000080452. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-AUG-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97920 REMARK 200 MONOCHROMATOR : CRYO-COOLED DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21931 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07200 REMARK 200 FOR THE DATA SET : 15.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.36100 REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS TRIS PROPANE, 21% W/V REMARK 280 PEG3350, 1% W/V POLYPROPYLENE GLYCOL, PH 7.2, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 39.46150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 378 REMARK 465 SER A 379 REMARK 465 GLY A 380 REMARK 465 GLY A 381 REMARK 465 SER A 382 REMARK 465 GLU A 491 REMARK 465 GLU A 492 REMARK 465 GLY A 493 REMARK 465 LEU A 494 REMARK 465 ASP A 495 REMARK 465 GLY A 807 REMARK 465 GLN A 808 REMARK 465 GLU A 809 REMARK 465 GLY B 378 REMARK 465 SER B 379 REMARK 465 GLY B 380 REMARK 465 GLY B 381 REMARK 465 SER B 382 REMARK 465 VAL B 383 REMARK 465 GLU B 491 REMARK 465 GLU B 492 REMARK 465 GLY B 493 REMARK 465 LEU B 494 REMARK 465 ASP B 495 REMARK 465 TYR B 496 REMARK 465 GLY B 605 REMARK 465 VAL B 606 REMARK 465 LEU B 607 REMARK 465 ASP B 608 REMARK 465 GLY B 807 REMARK 465 GLN B 808 REMARK 465 GLU B 809 REMARK 465 ALA C 104 REMARK 465 ASP C 113 REMARK 465 GLU C 114 REMARK 465 ALA C 115 REMARK 465 GLY C 116 REMARK 465 ALA C 117 REMARK 465 ASP C 118 REMARK 465 VAL C 119 REMARK 465 PRO C 120 REMARK 465 LEU C 121 REMARK 465 MET C 122 REMARK 465 ASP C 123 REMARK 465 ASN C 124 REMARK 465 ALA C 125 REMARK 465 GLN C 126 REMARK 465 GLN C 127 REMARK 465 ASP D 118 REMARK 465 VAL D 119 REMARK 465 PRO D 120 REMARK 465 LEU D 121 REMARK 465 MET D 122 REMARK 465 ASP D 123 REMARK 465 ASN D 124 REMARK 465 ALA D 125 REMARK 465 GLN D 126 REMARK 465 GLN D 127 REMARK 465 MET E -7 REMARK 465 GLY E -6 REMARK 465 HIS E -5 REMARK 465 HIS E -4 REMARK 465 HIS E -3 REMARK 465 HIS E -2 REMARK 465 HIS E -1 REMARK 465 HIS E 0 REMARK 465 MET F -7 REMARK 465 GLY F -6 REMARK 465 HIS F -5 REMARK 465 HIS F -4 REMARK 465 HIS F -3 REMARK 465 HIS F -2 REMARK 465 HIS F -1 REMARK 465 HIS F 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 383 CG1 CG2 REMARK 470 GLU A 394 CG CD OE1 OE2 REMARK 470 LYS A 411 CG CD CE NZ REMARK 470 ASP A 425 CG OD1 OD2 REMARK 470 GLN A 426 CG CD OE1 NE2 REMARK 470 ASN A 427 CG OD1 ND2 REMARK 470 LYS A 458 CG CD CE NZ REMARK 470 LYS A 487 CG CD CE NZ REMARK 470 TYR A 496 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ILE A 603 CG1 CG2 CD1 REMARK 470 VAL A 606 CG1 CG2 REMARK 470 LEU A 607 CG CD1 CD2 REMARK 470 ASP A 608 CG OD1 OD2 REMARK 470 LEU A 609 CG CD1 CD2 REMARK 470 PHE A 611 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 616 CG CD OE1 OE2 REMARK 470 LYS A 627 CG CD CE NZ REMARK 470 ASP A 629 CG OD1 OD2 REMARK 470 GLU A 634 CG CD OE1 OE2 REMARK 470 THR A 636 OG1 CG2 REMARK 470 GLU A 693 CG CD OE1 OE2 REMARK 470 VAL A 745 CG1 CG2 REMARK 470 LYS A 773 CG CD CE NZ REMARK 470 GLU A 801 CG CD OE1 OE2 REMARK 470 GLU A 802 CG CD OE1 OE2 REMARK 470 GLN B 385 CG CD OE1 NE2 REMARK 470 LEU B 386 CG CD1 CD2 REMARK 470 ASN B 399 CG OD1 ND2 REMARK 470 SER B 423 OG REMARK 470 LEU B 424 CG CD1 CD2 REMARK 470 ASP B 425 CG OD1 OD2 REMARK 470 GLN B 426 CG CD OE1 NE2 REMARK 470 ASN B 427 CG OD1 ND2 REMARK 470 GLN B 430 CG CD OE1 NE2 REMARK 470 GLU B 478 CG CD OE1 OE2 REMARK 470 LYS B 487 CG CD CE NZ REMARK 470 TYR B 524 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP B 525 CG OD1 OD2 REMARK 470 LYS B 578 CG CD CE NZ REMARK 470 MET B 598 CG SD CE REMARK 470 ILE B 603 CG1 CG2 CD1 REMARK 470 ASP B 615 CG OD1 OD2 REMARK 470 GLU B 616 CG CD OE1 OE2 REMARK 470 ARG B 617 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 620 CG CD OE1 OE2 REMARK 470 LYS B 627 CG CD CE NZ REMARK 470 ASP B 629 CG OD1 OD2 REMARK 470 ASN B 632 CG OD1 ND2 REMARK 470 VAL B 635 CG1 CG2 REMARK 470 THR B 636 OG1 CG2 REMARK 470 LYS B 640 CG CD CE NZ REMARK 470 LYS B 641 CG CD CE NZ REMARK 470 GLN B 657 CG CD OE1 NE2 REMARK 470 GLU B 693 CG CD OE1 OE2 REMARK 470 LYS B 700 CG CD CE NZ REMARK 470 LYS B 701 CG CD CE NZ REMARK 470 GLU B 710 CG CD OE1 OE2 REMARK 470 GLU B 713 CG CD OE1 OE2 REMARK 470 LYS B 720 CG CD CE NZ REMARK 470 VAL B 745 CG1 CG2 REMARK 470 LYS B 793 CG CD CE NZ REMARK 470 GLN B 794 CG CD OE1 NE2 REMARK 470 LYS B 795 CG CD CE NZ REMARK 470 GLU B 802 CG CD OE1 OE2 REMARK 470 ILE B 804 CG1 CG2 CD1 REMARK 470 GLN C 105 CG CD OE1 NE2 REMARK 470 ASP C 110 CG OD1 OD2 REMARK 470 GLU C 111 CG CD OE1 OE2 REMARK 470 ASP C 112 CG OD1 OD2 REMARK 470 GLN D 105 CG CD OE1 NE2 REMARK 470 ASP D 110 CG OD1 OD2 REMARK 470 GLU D 111 CG CD OE1 OE2 REMARK 470 ASP D 112 CG OD1 OD2 REMARK 470 ASP D 113 CG OD1 OD2 REMARK 470 GLU D 114 CG CD OE1 OE2 REMARK 470 LEU E 8 CG CD1 CD2 REMARK 470 LYS E 11 CG CD CE NZ REMARK 470 LYS E 29 CG CD CE NZ REMARK 470 LYS E 33 CG CD CE NZ REMARK 470 ILE E 44 CG1 CG2 CD1 REMARK 470 GLU E 51 CG CD OE1 OE2 REMARK 470 ASP E 52 CG OD1 OD2 REMARK 470 ARG E 54 CG CD NE CZ NH1 NH2 REMARK 470 LEU E 56 CG CD1 CD2 REMARK 470 LYS F 6 CG CD CE NZ REMARK 470 LYS F 29 CG CD CE NZ REMARK 470 ASP F 32 CG OD1 OD2 REMARK 470 LYS F 33 CG CD CE NZ REMARK 470 ARG F 42 CG CD NE CZ NH1 NH2 REMARK 470 GLN F 62 CG CD OE1 NE2 REMARK 470 LYS F 63 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 384 20.01 -73.44 REMARK 500 GLN A 426 153.93 -46.58 REMARK 500 TYR A 516 2.57 -69.38 REMARK 500 ASP A 525 -66.03 -96.85 REMARK 500 PHE A 565 64.04 -107.18 REMARK 500 VAL A 587 -74.21 -77.60 REMARK 500 ASN A 601 -167.57 -77.99 REMARK 500 ILE A 603 -57.24 -137.84 REMARK 500 PHE A 611 45.27 -78.94 REMARK 500 PHE A 618 32.80 71.95 REMARK 500 VAL A 653 -67.27 -91.42 REMARK 500 GLU A 710 0.09 -65.86 REMARK 500 ASN A 746 3.82 -67.87 REMARK 500 ASP A 782 92.93 -65.76 REMARK 500 GLN B 385 -19.85 -141.61 REMARK 500 ASN B 399 3.82 -62.21 REMARK 500 LEU B 448 42.33 -109.39 REMARK 500 ASN B 463 15.67 -143.60 REMARK 500 GLU B 471 5.22 -65.71 REMARK 500 ILE B 472 -42.57 -132.26 REMARK 500 PHE B 512 34.63 -94.27 REMARK 500 ASP B 563 56.70 -97.00 REMARK 500 ASP B 588 86.02 -157.41 REMARK 500 PHE B 611 89.04 -68.86 REMARK 500 LYS B 627 167.04 178.55 REMARK 500 ASN B 639 42.01 -147.90 REMARK 500 VAL B 653 -69.11 -101.83 REMARK 500 ASP B 674 4.55 -61.97 REMARK 500 HIS B 775 76.31 -116.55 REMARK 500 ASP B 782 97.66 -66.80 REMARK 500 THR B 803 -59.41 -125.22 REMARK 500 PRO C 106 -165.87 -77.69 REMARK 500 ASP C 110 -88.05 -121.44 REMARK 500 TYR D 109 37.54 -88.96 REMARK 500 GLU D 111 6.58 -56.93 REMARK 500 GLU D 114 31.16 -77.93 REMARK 500 ALA D 115 115.32 -37.31 REMARK 500 LEU E 8 6.19 -63.12 REMARK 500 TYR E 59 33.02 -82.24 REMARK 500 ASN E 60 51.56 39.23 REMARK 500 LYS F 11 109.94 -58.23 REMARK 500 THR F 55 -169.92 -106.04 REMARK 500 LEU F 73 -13.25 -140.26 REMARK 500 REMARK 500 REMARK: NULL DBREF 4LCD A 383 809 UNP P39940 RSP5_YEAST 383 809 DBREF 4LCD B 383 809 UNP P39940 RSP5_YEAST 383 809 DBREF 4LCD C 104 127 UNP P14359 SNA3_YEAST 104 127 DBREF 4LCD D 104 127 UNP P14359 SNA3_YEAST 104 127 DBREF 4LCD E 1 75 UNP P0CG48 UBC_HUMAN 1 75 DBREF 4LCD F 1 75 UNP P0CG48 UBC_HUMAN 1 75 SEQADV 4LCD GLY A 378 UNP P39940 EXPRESSION TAG SEQADV 4LCD SER A 379 UNP P39940 EXPRESSION TAG SEQADV 4LCD GLY A 380 UNP P39940 EXPRESSION TAG SEQADV 4LCD GLY A 381 UNP P39940 EXPRESSION TAG SEQADV 4LCD SER A 382 UNP P39940 EXPRESSION TAG SEQADV 4LCD LEU A 455 UNP P39940 CYS 455 ENGINEERED MUTATION SEQADV 4LCD GLY A 517 UNP P39940 CYS 517 ENGINEERED MUTATION SEQADV 4LCD ALA A 721 UNP P39940 CYS 721 ENGINEERED MUTATION SEQADV 4LCD GLY B 378 UNP P39940 EXPRESSION TAG SEQADV 4LCD SER B 379 UNP P39940 EXPRESSION TAG SEQADV 4LCD GLY B 380 UNP P39940 EXPRESSION TAG SEQADV 4LCD GLY B 381 UNP P39940 EXPRESSION TAG SEQADV 4LCD SER B 382 UNP P39940 EXPRESSION TAG SEQADV 4LCD LEU B 455 UNP P39940 CYS 455 ENGINEERED MUTATION SEQADV 4LCD GLY B 517 UNP P39940 CYS 517 ENGINEERED MUTATION SEQADV 4LCD ALA B 721 UNP P39940 CYS 721 ENGINEERED MUTATION SEQADV 4LCD ALA C 125 UNP P14359 LYS 125 ENGINEERED MUTATION SEQADV 4LCD ALA D 125 UNP P14359 LYS 125 ENGINEERED MUTATION SEQADV 4LCD MET E -7 UNP P0CG48 EXPRESSION TAG SEQADV 4LCD GLY E -6 UNP P0CG48 EXPRESSION TAG SEQADV 4LCD HIS E -5 UNP P0CG48 EXPRESSION TAG SEQADV 4LCD HIS E -4 UNP P0CG48 EXPRESSION TAG SEQADV 4LCD HIS E -3 UNP P0CG48 EXPRESSION TAG SEQADV 4LCD HIS E -2 UNP P0CG48 EXPRESSION TAG SEQADV 4LCD HIS E -1 UNP P0CG48 EXPRESSION TAG SEQADV 4LCD HIS E 0 UNP P0CG48 EXPRESSION TAG SEQADV 4LCD CYS E 75 UNP P0CG48 GLY 75 ENGINEERED MUTATION SEQADV 4LCD MET F -7 UNP P0CG48 EXPRESSION TAG SEQADV 4LCD GLY F -6 UNP P0CG48 EXPRESSION TAG SEQADV 4LCD HIS F -5 UNP P0CG48 EXPRESSION TAG SEQADV 4LCD HIS F -4 UNP P0CG48 EXPRESSION TAG SEQADV 4LCD HIS F -3 UNP P0CG48 EXPRESSION TAG SEQADV 4LCD HIS F -2 UNP P0CG48 EXPRESSION TAG SEQADV 4LCD HIS F -1 UNP P0CG48 EXPRESSION TAG SEQADV 4LCD HIS F 0 UNP P0CG48 EXPRESSION TAG SEQADV 4LCD CYS F 75 UNP P0CG48 GLY 75 ENGINEERED MUTATION SEQRES 1 A 432 GLY SER GLY GLY SER VAL SER GLN LEU GLY PRO LEU PRO SEQRES 2 A 432 SER GLY TRP GLU MET ARG LEU THR ASN THR ALA ARG VAL SEQRES 3 A 432 TYR PHE VAL ASP HIS ASN THR LYS THR THR THR TRP ASP SEQRES 4 A 432 ASP PRO ARG LEU PRO SER SER LEU ASP GLN ASN VAL PRO SEQRES 5 A 432 GLN TYR LYS ARG ASP PHE ARG ARG LYS VAL ILE TYR PHE SEQRES 6 A 432 ARG SER GLN PRO ALA LEU ARG ILE LEU PRO GLY GLN LEU SEQRES 7 A 432 HIS ILE LYS VAL ARG ARG LYS ASN ILE PHE GLU ASP ALA SEQRES 8 A 432 TYR GLN GLU ILE MET ARG GLN THR PRO GLU ASP LEU LYS SEQRES 9 A 432 LYS ARG LEU MET ILE LYS PHE ASP GLY GLU GLU GLY LEU SEQRES 10 A 432 ASP TYR GLY GLY VAL SER ARG GLU PHE PHE PHE LEU LEU SEQRES 11 A 432 SER HIS GLU MET PHE ASN PRO PHE TYR GLY LEU PHE GLU SEQRES 12 A 432 TYR SER ALA TYR ASP ASN TYR THR ILE GLN ILE ASN PRO SEQRES 13 A 432 ASN SER GLY ILE ASN PRO GLU HIS LEU ASN TYR PHE LYS SEQRES 14 A 432 PHE ILE GLY ARG VAL VAL GLY LEU GLY VAL PHE HIS ARG SEQRES 15 A 432 ARG PHE LEU ASP ALA PHE PHE VAL GLY ALA LEU TYR LYS SEQRES 16 A 432 MET MET LEU ARG LYS LYS VAL VAL LEU GLN ASP MET GLU SEQRES 17 A 432 GLY VAL ASP ALA GLU VAL TYR ASN SER LEU ASN TRP MET SEQRES 18 A 432 LEU GLU ASN SER ILE ASP GLY VAL LEU ASP LEU THR PHE SEQRES 19 A 432 SER ALA ASP ASP GLU ARG PHE GLY GLU VAL VAL THR VAL SEQRES 20 A 432 ASP LEU LYS PRO ASP GLY ARG ASN ILE GLU VAL THR ASP SEQRES 21 A 432 GLY ASN LYS LYS GLU TYR VAL GLU LEU TYR THR GLN TRP SEQRES 22 A 432 ARG ILE VAL ASP ARG VAL GLN GLU GLN PHE LYS ALA PHE SEQRES 23 A 432 MET ASP GLY PHE ASN GLU LEU ILE PRO GLU ASP LEU VAL SEQRES 24 A 432 THR VAL PHE ASP GLU ARG GLU LEU GLU LEU LEU ILE GLY SEQRES 25 A 432 GLY ILE ALA GLU ILE ASP ILE GLU ASP TRP LYS LYS HIS SEQRES 26 A 432 THR ASP TYR ARG GLY TYR GLN GLU SER ASP GLU VAL ILE SEQRES 27 A 432 GLN TRP PHE TRP LYS ALA VAL SER GLU TRP ASP ASN GLU SEQRES 28 A 432 GLN ARG ALA ARG LEU LEU GLN PHE THR THR GLY THR SER SEQRES 29 A 432 ARG ILE PRO VAL ASN GLY PHE LYS ASP LEU GLN GLY SER SEQRES 30 A 432 ASP GLY PRO ARG ARG PHE THR ILE GLU LYS ALA GLY GLU SEQRES 31 A 432 VAL GLN GLN LEU PRO LYS SER HIS THR CYS PHE ASN ARG SEQRES 32 A 432 VAL ASP LEU PRO GLN TYR VAL ASP TYR ASP SER MET LYS SEQRES 33 A 432 GLN LYS LEU THR LEU ALA VAL GLU GLU THR ILE GLY PHE SEQRES 34 A 432 GLY GLN GLU SEQRES 1 B 432 GLY SER GLY GLY SER VAL SER GLN LEU GLY PRO LEU PRO SEQRES 2 B 432 SER GLY TRP GLU MET ARG LEU THR ASN THR ALA ARG VAL SEQRES 3 B 432 TYR PHE VAL ASP HIS ASN THR LYS THR THR THR TRP ASP SEQRES 4 B 432 ASP PRO ARG LEU PRO SER SER LEU ASP GLN ASN VAL PRO SEQRES 5 B 432 GLN TYR LYS ARG ASP PHE ARG ARG LYS VAL ILE TYR PHE SEQRES 6 B 432 ARG SER GLN PRO ALA LEU ARG ILE LEU PRO GLY GLN LEU SEQRES 7 B 432 HIS ILE LYS VAL ARG ARG LYS ASN ILE PHE GLU ASP ALA SEQRES 8 B 432 TYR GLN GLU ILE MET ARG GLN THR PRO GLU ASP LEU LYS SEQRES 9 B 432 LYS ARG LEU MET ILE LYS PHE ASP GLY GLU GLU GLY LEU SEQRES 10 B 432 ASP TYR GLY GLY VAL SER ARG GLU PHE PHE PHE LEU LEU SEQRES 11 B 432 SER HIS GLU MET PHE ASN PRO PHE TYR GLY LEU PHE GLU SEQRES 12 B 432 TYR SER ALA TYR ASP ASN TYR THR ILE GLN ILE ASN PRO SEQRES 13 B 432 ASN SER GLY ILE ASN PRO GLU HIS LEU ASN TYR PHE LYS SEQRES 14 B 432 PHE ILE GLY ARG VAL VAL GLY LEU GLY VAL PHE HIS ARG SEQRES 15 B 432 ARG PHE LEU ASP ALA PHE PHE VAL GLY ALA LEU TYR LYS SEQRES 16 B 432 MET MET LEU ARG LYS LYS VAL VAL LEU GLN ASP MET GLU SEQRES 17 B 432 GLY VAL ASP ALA GLU VAL TYR ASN SER LEU ASN TRP MET SEQRES 18 B 432 LEU GLU ASN SER ILE ASP GLY VAL LEU ASP LEU THR PHE SEQRES 19 B 432 SER ALA ASP ASP GLU ARG PHE GLY GLU VAL VAL THR VAL SEQRES 20 B 432 ASP LEU LYS PRO ASP GLY ARG ASN ILE GLU VAL THR ASP SEQRES 21 B 432 GLY ASN LYS LYS GLU TYR VAL GLU LEU TYR THR GLN TRP SEQRES 22 B 432 ARG ILE VAL ASP ARG VAL GLN GLU GLN PHE LYS ALA PHE SEQRES 23 B 432 MET ASP GLY PHE ASN GLU LEU ILE PRO GLU ASP LEU VAL SEQRES 24 B 432 THR VAL PHE ASP GLU ARG GLU LEU GLU LEU LEU ILE GLY SEQRES 25 B 432 GLY ILE ALA GLU ILE ASP ILE GLU ASP TRP LYS LYS HIS SEQRES 26 B 432 THR ASP TYR ARG GLY TYR GLN GLU SER ASP GLU VAL ILE SEQRES 27 B 432 GLN TRP PHE TRP LYS ALA VAL SER GLU TRP ASP ASN GLU SEQRES 28 B 432 GLN ARG ALA ARG LEU LEU GLN PHE THR THR GLY THR SER SEQRES 29 B 432 ARG ILE PRO VAL ASN GLY PHE LYS ASP LEU GLN GLY SER SEQRES 30 B 432 ASP GLY PRO ARG ARG PHE THR ILE GLU LYS ALA GLY GLU SEQRES 31 B 432 VAL GLN GLN LEU PRO LYS SER HIS THR CYS PHE ASN ARG SEQRES 32 B 432 VAL ASP LEU PRO GLN TYR VAL ASP TYR ASP SER MET LYS SEQRES 33 B 432 GLN LYS LEU THR LEU ALA VAL GLU GLU THR ILE GLY PHE SEQRES 34 B 432 GLY GLN GLU SEQRES 1 C 24 ALA GLN PRO PRO ALA TYR ASP GLU ASP ASP GLU ALA GLY SEQRES 2 C 24 ALA ASP VAL PRO LEU MET ASP ASN ALA GLN GLN SEQRES 1 D 24 ALA GLN PRO PRO ALA TYR ASP GLU ASP ASP GLU ALA GLY SEQRES 2 D 24 ALA ASP VAL PRO LEU MET ASP ASN ALA GLN GLN SEQRES 1 E 83 MET GLY HIS HIS HIS HIS HIS HIS MET GLN ILE PHE VAL SEQRES 2 E 83 LYS THR LEU THR GLY LYS THR ILE THR LEU GLU VAL GLU SEQRES 3 E 83 PRO SER ASP THR ILE GLU ASN VAL LYS ALA LYS ILE GLN SEQRES 4 E 83 ASP LYS GLU GLY ILE PRO PRO ASP GLN GLN ARG LEU ILE SEQRES 5 E 83 PHE ALA GLY LYS GLN LEU GLU ASP GLY ARG THR LEU SER SEQRES 6 E 83 ASP TYR ASN ILE GLN LYS GLU SER THR LEU HIS LEU VAL SEQRES 7 E 83 LEU ARG LEU ARG CYS SEQRES 1 F 83 MET GLY HIS HIS HIS HIS HIS HIS MET GLN ILE PHE VAL SEQRES 2 F 83 LYS THR LEU THR GLY LYS THR ILE THR LEU GLU VAL GLU SEQRES 3 F 83 PRO SER ASP THR ILE GLU ASN VAL LYS ALA LYS ILE GLN SEQRES 4 F 83 ASP LYS GLU GLY ILE PRO PRO ASP GLN GLN ARG LEU ILE SEQRES 5 F 83 PHE ALA GLY LYS GLN LEU GLU ASP GLY ARG THR LEU SER SEQRES 6 F 83 ASP TYR ASN ILE GLN LYS GLU SER THR LEU HIS LEU VAL SEQRES 7 F 83 LEU ARG LEU ARG CYS HELIX 1 1 PRO A 429 ARG A 443 1 15 HELIX 2 2 GLN A 445 ARG A 449 5 5 HELIX 3 3 ARG A 460 LYS A 462 5 3 HELIX 4 4 ASN A 463 ARG A 474 1 12 HELIX 5 5 GLU A 478 LYS A 482 5 5 HELIX 6 6 GLY A 498 PHE A 512 1 15 HELIX 7 7 ASN A 513 GLY A 517 5 5 HELIX 8 8 PRO A 533 PRO A 539 5 7 HELIX 9 9 GLU A 540 HIS A 558 1 19 HELIX 10 10 VAL A 567 LEU A 575 1 9 HELIX 11 11 VAL A 580 GLN A 582 5 3 HELIX 12 12 ASP A 583 ASP A 588 1 6 HELIX 13 13 ASP A 588 ASN A 596 1 9 HELIX 14 14 ASN A 639 ILE A 652 1 14 HELIX 15 15 VAL A 653 ARG A 655 5 3 HELIX 16 16 VAL A 656 ASN A 668 1 13 HELIX 17 17 PRO A 672 THR A 677 1 6 HELIX 18 18 ASP A 680 GLY A 690 1 11 HELIX 19 19 ASP A 695 HIS A 702 1 8 HELIX 20 20 ASP A 712 TRP A 725 1 14 HELIX 21 21 ASP A 726 THR A 738 1 13 HELIX 22 22 ASN A 746 LEU A 751 5 6 HELIX 23 23 ASP A 788 ILE A 804 1 17 HELIX 24 24 PRO B 429 GLN B 445 1 17 HELIX 25 25 PRO B 446 ARG B 449 5 4 HELIX 26 26 ASN B 463 ARG B 474 1 12 HELIX 27 27 THR B 476 LYS B 481 1 6 HELIX 28 28 GLU B 502 PHE B 512 1 11 HELIX 29 29 ASN B 513 GLY B 517 5 5 HELIX 30 30 ASN B 534 ASN B 538 5 5 HELIX 31 31 GLU B 540 HIS B 558 1 19 HELIX 32 32 VAL B 567 LEU B 575 1 9 HELIX 33 33 VAL B 580 GLN B 582 5 3 HELIX 34 34 ASP B 583 ASP B 588 1 6 HELIX 35 35 GLU B 590 ASN B 601 1 12 HELIX 36 36 ASP B 629 ILE B 633 5 5 HELIX 37 37 LYS B 641 VAL B 653 1 13 HELIX 38 38 VAL B 656 ASN B 668 1 13 HELIX 39 39 PRO B 672 THR B 677 1 6 HELIX 40 40 ASP B 680 GLY B 690 1 11 HELIX 41 41 ASP B 695 LYS B 701 1 7 HELIX 42 42 ASP B 712 TRP B 725 1 14 HELIX 43 43 ASP B 726 GLY B 739 1 14 HELIX 44 44 GLY B 747 LEU B 751 5 5 HELIX 45 45 THR B 776 ASN B 779 5 4 HELIX 46 46 ASP B 788 THR B 803 1 16 HELIX 47 47 ALA D 108 ALA D 115 5 8 HELIX 48 48 THR E 22 GLY E 35 1 14 HELIX 49 49 THR F 22 GLY F 35 1 14 SHEET 1 A 3 TRP A 393 ARG A 396 0 SHEET 2 A 3 TYR A 404 ASP A 407 -1 O VAL A 406 N GLU A 394 SHEET 3 A 3 THR A 412 THR A 414 -1 O THR A 414 N PHE A 405 SHEET 1 B 2 GLN A 454 VAL A 459 0 SHEET 2 B 2 ARG A 483 PHE A 488 1 O MET A 485 N LEU A 455 SHEET 1 C 2 PHE A 519 TYR A 521 0 SHEET 2 C 2 ILE A 529 ILE A 531 -1 O GLN A 530 N GLU A 520 SHEET 1 D 2 LEU A 609 THR A 610 0 SHEET 2 D 2 GLU A 634 VAL A 635 -1 O VAL A 635 N LEU A 609 SHEET 1 E 2 SER A 612 ARG A 617 0 SHEET 2 E 2 GLU A 620 ASP A 625 -1 O GLU A 620 N ARG A 617 SHEET 1 F 4 THR A 703 ARG A 706 0 SHEET 2 F 4 PHE A 760 GLU A 763 1 O ILE A 762 N ASP A 704 SHEET 3 F 4 ARG A 780 ASP A 782 1 O VAL A 781 N THR A 761 SHEET 4 F 4 LYS A 773 SER A 774 -1 N LYS A 773 O ASP A 782 SHEET 1 G 3 TRP B 393 LEU B 397 0 SHEET 2 G 3 VAL B 403 ASP B 407 -1 O VAL B 406 N GLU B 394 SHEET 3 G 3 THR B 412 THR B 414 -1 O THR B 414 N PHE B 405 SHEET 1 H 2 LEU B 451 ARG B 460 0 SHEET 2 H 2 LYS B 482 ASP B 489 1 O MET B 485 N ILE B 457 SHEET 1 I 2 PHE B 519 TYR B 521 0 SHEET 2 I 2 ILE B 529 ILE B 531 -1 O GLN B 530 N GLU B 520 SHEET 1 J 2 SER B 612 ARG B 617 0 SHEET 2 J 2 GLU B 620 ASP B 625 -1 O GLU B 620 N ARG B 617 SHEET 1 K 2 THR B 703 ASP B 704 0 SHEET 2 K 2 PHE B 760 THR B 761 1 O PHE B 760 N ASP B 704 SHEET 1 L 2 LYS B 773 HIS B 775 0 SHEET 2 L 2 ARG B 780 ASP B 782 -1 O ARG B 780 N HIS B 775 SHEET 1 M 4 THR E 12 THR E 14 0 SHEET 2 M 4 ILE E 3 LYS E 6 -1 N VAL E 5 O ILE E 13 SHEET 3 M 4 SER E 65 LEU E 71 1 O LEU E 67 N LYS E 6 SHEET 4 M 4 GLN E 41 ILE E 44 -1 N ILE E 44 O HIS E 68 SHEET 1 N 4 THR F 12 GLU F 16 0 SHEET 2 N 4 GLN F 2 THR F 7 -1 N VAL F 5 O ILE F 13 SHEET 3 N 4 LEU F 67 LEU F 71 1 O LEU F 67 N LYS F 6 SHEET 4 N 4 GLN F 41 ILE F 44 -1 N ILE F 44 O HIS F 68 CRYST1 83.046 78.923 96.722 90.00 101.67 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012042 0.000000 0.002487 0.00000 SCALE2 0.000000 0.012671 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010557 0.00000