data_4LD3 # _entry.id 4LD3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4LD3 pdb_00004ld3 10.2210/pdb4ld3/pdb RCSB RCSB080478 ? ? WWPDB D_1000080478 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-09-04 2 'Structure model' 1 1 2013-10-16 3 'Structure model' 1 2 2013-12-18 4 'Structure model' 1 3 2014-02-05 5 'Structure model' 1 4 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' struct_ref_seq_dif 5 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_ref_seq_dif.details' 4 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4LD3 _pdbx_database_status.recvd_initial_deposition_date 2013-06-24 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4LD1 . unspecified PDB 4lzf . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hatzopoulos, G.N.' 1 'Vakonakis, I.' 2 # _citation.id primary _citation.title 'Structural analysis of the G-box domain of the microcephaly protein CPAP suggests a role in centriole architecture.' _citation.journal_abbrev Structure _citation.journal_volume 21 _citation.page_first 2069 _citation.page_last 2077 _citation.year 2013 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24076405 _citation.pdbx_database_id_DOI 10.1016/j.str.2013.08.019 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hatzopoulos, G.N.' 1 ? primary 'Erat, M.C.' 2 ? primary 'Cutts, E.' 3 ? primary 'Rogala, K.B.' 4 ? primary 'Slater, L.M.' 5 ? primary 'Stansfeld, P.J.' 6 ? primary 'Vakonakis, I.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uncharacterized protein' 20860.330 1 ? ? 'G-box domain (unp residues 942-1121)' ? 2 polymer man 'SCL-interrupting locus protein homolog' 6531.192 1 ? ? 'CPAP interacting fragment (unp residues 398-449)' ? 3 non-polymer syn 'ISOPROPYL ALCOHOL' 60.095 3 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 5 water nat water 18.015 3 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GPLGSDSKIEKMLPDGGRLVVFPNGTRKELSADGQTVKVMFFNGDVKHTMPDQRVIYYYAEAQTTHITYPDGMEVLQFPN NQTEKHFPDGRKEITFPDQTVKTLHPDGREESVLTDGTIIQLNPDGSKVIQFNTGQREIHTADFKRREYPDGTVKTVYSD GRQETQYPTGRVRLKDPQGKVIMD ; ;GPLGSDSKIEKMLPDGGRLVVFPNGTRKELSADGQTVKVMFFNGDVKHTMPDQRVIYYYAEAQTTHITYPDGMEVLQFPN NQTEKHFPDGRKEITFPDQTVKTLHPDGREESVLTDGTIIQLNPDGSKVIQFNTGQREIHTADFKRREYPDGTVKTVYSD GRQETQYPTGRVRLKDPQGKVIMD ; A ? 2 'polypeptide(L)' no no GPLGSCYQNKLSISDHDSGVEDEDLSPRPSPNPHPVSQQTKRVHPLVPELSMVLDGSFLD GPLGSCYQNKLSISDHDSGVEDEDLSPRPSPNPHPVSQQTKRVHPLVPELSMVLDGSFLD B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ISOPROPYL ALCOHOL' IPA 4 GLYCEROL GOL 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 ASP n 1 7 SER n 1 8 LYS n 1 9 ILE n 1 10 GLU n 1 11 LYS n 1 12 MET n 1 13 LEU n 1 14 PRO n 1 15 ASP n 1 16 GLY n 1 17 GLY n 1 18 ARG n 1 19 LEU n 1 20 VAL n 1 21 VAL n 1 22 PHE n 1 23 PRO n 1 24 ASN n 1 25 GLY n 1 26 THR n 1 27 ARG n 1 28 LYS n 1 29 GLU n 1 30 LEU n 1 31 SER n 1 32 ALA n 1 33 ASP n 1 34 GLY n 1 35 GLN n 1 36 THR n 1 37 VAL n 1 38 LYS n 1 39 VAL n 1 40 MET n 1 41 PHE n 1 42 PHE n 1 43 ASN n 1 44 GLY n 1 45 ASP n 1 46 VAL n 1 47 LYS n 1 48 HIS n 1 49 THR n 1 50 MET n 1 51 PRO n 1 52 ASP n 1 53 GLN n 1 54 ARG n 1 55 VAL n 1 56 ILE n 1 57 TYR n 1 58 TYR n 1 59 TYR n 1 60 ALA n 1 61 GLU n 1 62 ALA n 1 63 GLN n 1 64 THR n 1 65 THR n 1 66 HIS n 1 67 ILE n 1 68 THR n 1 69 TYR n 1 70 PRO n 1 71 ASP n 1 72 GLY n 1 73 MET n 1 74 GLU n 1 75 VAL n 1 76 LEU n 1 77 GLN n 1 78 PHE n 1 79 PRO n 1 80 ASN n 1 81 ASN n 1 82 GLN n 1 83 THR n 1 84 GLU n 1 85 LYS n 1 86 HIS n 1 87 PHE n 1 88 PRO n 1 89 ASP n 1 90 GLY n 1 91 ARG n 1 92 LYS n 1 93 GLU n 1 94 ILE n 1 95 THR n 1 96 PHE n 1 97 PRO n 1 98 ASP n 1 99 GLN n 1 100 THR n 1 101 VAL n 1 102 LYS n 1 103 THR n 1 104 LEU n 1 105 HIS n 1 106 PRO n 1 107 ASP n 1 108 GLY n 1 109 ARG n 1 110 GLU n 1 111 GLU n 1 112 SER n 1 113 VAL n 1 114 LEU n 1 115 THR n 1 116 ASP n 1 117 GLY n 1 118 THR n 1 119 ILE n 1 120 ILE n 1 121 GLN n 1 122 LEU n 1 123 ASN n 1 124 PRO n 1 125 ASP n 1 126 GLY n 1 127 SER n 1 128 LYS n 1 129 VAL n 1 130 ILE n 1 131 GLN n 1 132 PHE n 1 133 ASN n 1 134 THR n 1 135 GLY n 1 136 GLN n 1 137 ARG n 1 138 GLU n 1 139 ILE n 1 140 HIS n 1 141 THR n 1 142 ALA n 1 143 ASP n 1 144 PHE n 1 145 LYS n 1 146 ARG n 1 147 ARG n 1 148 GLU n 1 149 TYR n 1 150 PRO n 1 151 ASP n 1 152 GLY n 1 153 THR n 1 154 VAL n 1 155 LYS n 1 156 THR n 1 157 VAL n 1 158 TYR n 1 159 SER n 1 160 ASP n 1 161 GLY n 1 162 ARG n 1 163 GLN n 1 164 GLU n 1 165 THR n 1 166 GLN n 1 167 TYR n 1 168 PRO n 1 169 THR n 1 170 GLY n 1 171 ARG n 1 172 VAL n 1 173 ARG n 1 174 LEU n 1 175 LYS n 1 176 ASP n 1 177 PRO n 1 178 GLN n 1 179 GLY n 1 180 LYS n 1 181 VAL n 1 182 ILE n 1 183 MET n 1 184 ASP n 2 1 GLY n 2 2 PRO n 2 3 LEU n 2 4 GLY n 2 5 SER n 2 6 CYS n 2 7 TYR n 2 8 GLN n 2 9 ASN n 2 10 LYS n 2 11 LEU n 2 12 SER n 2 13 ILE n 2 14 SER n 2 15 ASP n 2 16 HIS n 2 17 ASP n 2 18 SER n 2 19 GLY n 2 20 VAL n 2 21 GLU n 2 22 ASP n 2 23 GLU n 2 24 ASP n 2 25 LEU n 2 26 SER n 2 27 PRO n 2 28 ARG n 2 29 PRO n 2 30 SER n 2 31 PRO n 2 32 ASN n 2 33 PRO n 2 34 HIS n 2 35 PRO n 2 36 VAL n 2 37 SER n 2 38 GLN n 2 39 GLN n 2 40 THR n 2 41 LYS n 2 42 ARG n 2 43 VAL n 2 44 HIS n 2 45 PRO n 2 46 LEU n 2 47 VAL n 2 48 PRO n 2 49 GLU n 2 50 LEU n 2 51 SER n 2 52 MET n 2 53 VAL n 2 54 LEU n 2 55 ASP n 2 56 GLY n 2 57 SER n 2 58 PHE n 2 59 LEU n 2 60 ASP n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? 'leopard danio,zebra danio,zebra fish' ? cenpj ? ? ? ? ? ? 'Danio rerio' 7955 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? 'leopard danio,zebra danio,zebra fish' ? 'stil, sill, zgc:110502' ? ? ? ? ? ? 'Danio rerio' 7955 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IPA non-polymer . 'ISOPROPYL ALCOHOL' 2-PROPANOL 'C3 H8 O' 60.095 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 938 ? ? ? A . n A 1 2 PRO 2 939 ? ? ? A . n A 1 3 LEU 3 940 ? ? ? A . n A 1 4 GLY 4 941 ? ? ? A . n A 1 5 SER 5 942 ? ? ? A . n A 1 6 ASP 6 943 ? ? ? A . n A 1 7 SER 7 944 ? ? ? A . n A 1 8 LYS 8 945 ? ? ? A . n A 1 9 ILE 9 946 ? ? ? A . n A 1 10 GLU 10 947 ? ? ? A . n A 1 11 LYS 11 948 ? ? ? A . n A 1 12 MET 12 949 ? ? ? A . n A 1 13 LEU 13 950 ? ? ? A . n A 1 14 PRO 14 951 ? ? ? A . n A 1 15 ASP 15 952 ? ? ? A . n A 1 16 GLY 16 953 15 GLY GLY A . n A 1 17 GLY 17 954 16 GLY GLY A . n A 1 18 ARG 18 955 17 ARG ARG A . n A 1 19 LEU 19 956 18 LEU LEU A . n A 1 20 VAL 20 957 19 VAL VAL A . n A 1 21 VAL 21 958 20 VAL VAL A . n A 1 22 PHE 22 959 21 PHE PHE A . n A 1 23 PRO 23 960 22 PRO PRO A . n A 1 24 ASN 24 961 23 ASN ASN A . n A 1 25 GLY 25 962 24 GLY GLY A . n A 1 26 THR 26 963 25 THR THR A . n A 1 27 ARG 27 964 26 ARG ARG A . n A 1 28 LYS 28 965 27 LYS LYS A . n A 1 29 GLU 29 966 28 GLU GLU A . n A 1 30 LEU 30 967 29 LEU LEU A . n A 1 31 SER 31 968 30 SER SER A . n A 1 32 ALA 32 969 31 ALA ALA A . n A 1 33 ASP 33 970 32 ASP ASP A . n A 1 34 GLY 34 971 33 GLY GLY A . n A 1 35 GLN 35 972 34 GLN GLN A . n A 1 36 THR 36 973 35 THR THR A . n A 1 37 VAL 37 974 36 VAL VAL A . n A 1 38 LYS 38 975 37 LYS LYS A . n A 1 39 VAL 39 976 38 VAL VAL A . n A 1 40 MET 40 977 39 MET MET A . n A 1 41 PHE 41 978 40 PHE PHE A . n A 1 42 PHE 42 979 41 PHE PHE A . n A 1 43 ASN 43 980 42 ASN ASN A . n A 1 44 GLY 44 981 43 GLY GLY A . n A 1 45 ASP 45 982 44 ASP ASP A . n A 1 46 VAL 46 983 45 VAL VAL A . n A 1 47 LYS 47 984 46 LYS LYS A . n A 1 48 HIS 48 985 47 HIS HIS A . n A 1 49 THR 49 986 48 THR THR A . n A 1 50 MET 50 987 49 MET MET A . n A 1 51 PRO 51 988 50 PRO PRO A . n A 1 52 ASP 52 989 51 ASP ASP A . n A 1 53 GLN 53 990 52 GLN GLN A . n A 1 54 ARG 54 991 53 ARG ARG A . n A 1 55 VAL 55 992 54 VAL VAL A . n A 1 56 ILE 56 993 55 ILE ILE A . n A 1 57 TYR 57 994 56 TYR TYR A . n A 1 58 TYR 58 995 57 TYR TYR A . n A 1 59 TYR 59 996 58 TYR TYR A . n A 1 60 ALA 60 997 59 ALA ALA A . n A 1 61 GLU 61 998 60 GLU GLU A . n A 1 62 ALA 62 999 61 ALA ALA A . n A 1 63 GLN 63 1000 62 GLN GLN A . n A 1 64 THR 64 1001 63 THR THR A . n A 1 65 THR 65 1002 64 THR THR A . n A 1 66 HIS 66 1003 65 HIS HIS A . n A 1 67 ILE 67 1004 66 ILE ILE A . n A 1 68 THR 68 1005 67 THR THR A . n A 1 69 TYR 69 1006 68 TYR TYR A . n A 1 70 PRO 70 1007 69 PRO PRO A . n A 1 71 ASP 71 1008 70 ASP ASP A . n A 1 72 GLY 72 1009 71 GLY GLY A . n A 1 73 MET 73 1010 72 MET MET A . n A 1 74 GLU 74 1011 73 GLU GLU A . n A 1 75 VAL 75 1012 74 VAL VAL A . n A 1 76 LEU 76 1013 75 LEU LEU A . n A 1 77 GLN 77 1014 76 GLN GLN A . n A 1 78 PHE 78 1015 77 PHE PHE A . n A 1 79 PRO 79 1016 78 PRO PRO A . n A 1 80 ASN 80 1017 79 ASN ASN A . n A 1 81 ASN 81 1018 80 ASN ASN A . n A 1 82 GLN 82 1019 81 GLN GLN A . n A 1 83 THR 83 1020 82 THR THR A . n A 1 84 GLU 84 1021 83 GLU GLU A . n A 1 85 LYS 85 1022 84 LYS LYS A . n A 1 86 HIS 86 1023 85 HIS HIS A . n A 1 87 PHE 87 1024 86 PHE PHE A . n A 1 88 PRO 88 1025 87 PRO PRO A . n A 1 89 ASP 89 1026 88 ASP ASP A . n A 1 90 GLY 90 1027 89 GLY GLY A . n A 1 91 ARG 91 1028 90 ARG ARG A . n A 1 92 LYS 92 1029 91 LYS LYS A . n A 1 93 GLU 93 1030 92 GLU GLU A . n A 1 94 ILE 94 1031 93 ILE ILE A . n A 1 95 THR 95 1032 94 THR THR A . n A 1 96 PHE 96 1033 95 PHE PHE A . n A 1 97 PRO 97 1034 96 PRO PRO A . n A 1 98 ASP 98 1035 97 ASP ASP A . n A 1 99 GLN 99 1036 98 GLN GLN A . n A 1 100 THR 100 1037 99 THR THR A . n A 1 101 VAL 101 1038 100 VAL VAL A . n A 1 102 LYS 102 1039 101 LYS LYS A . n A 1 103 THR 103 1040 102 THR THR A . n A 1 104 LEU 104 1041 103 LEU LEU A . n A 1 105 HIS 105 1042 104 HIS HIS A . n A 1 106 PRO 106 1043 105 PRO PRO A . n A 1 107 ASP 107 1044 106 ASP ASP A . n A 1 108 GLY 108 1045 107 GLY GLY A . n A 1 109 ARG 109 1046 108 ARG ARG A . n A 1 110 GLU 110 1047 109 GLU GLU A . n A 1 111 GLU 111 1048 110 GLU GLU A . n A 1 112 SER 112 1049 111 SER SER A . n A 1 113 VAL 113 1050 112 VAL VAL A . n A 1 114 LEU 114 1051 113 LEU LEU A . n A 1 115 THR 115 1052 114 THR THR A . n A 1 116 ASP 116 1053 115 ASP ASP A . n A 1 117 GLY 117 1054 116 GLY GLY A . n A 1 118 THR 118 1055 117 THR THR A . n A 1 119 ILE 119 1056 118 ILE ILE A . n A 1 120 ILE 120 1057 119 ILE ILE A . n A 1 121 GLN 121 1058 120 GLN GLN A . n A 1 122 LEU 122 1059 121 LEU LEU A . n A 1 123 ASN 123 1060 122 ASN ASN A . n A 1 124 PRO 124 1061 123 PRO PRO A . n A 1 125 ASP 125 1062 124 ASP ASP A . n A 1 126 GLY 126 1063 125 GLY GLY A . n A 1 127 SER 127 1064 126 SER SER A . n A 1 128 LYS 128 1065 127 LYS LYS A . n A 1 129 VAL 129 1066 128 VAL VAL A . n A 1 130 ILE 130 1067 129 ILE ILE A . n A 1 131 GLN 131 1068 130 GLN GLN A . n A 1 132 PHE 132 1069 131 PHE PHE A . n A 1 133 ASN 133 1070 132 ASN ASN A . n A 1 134 THR 134 1071 133 THR THR A . n A 1 135 GLY 135 1072 134 GLY GLY A . n A 1 136 GLN 136 1073 135 GLN GLN A . n A 1 137 ARG 137 1074 136 ARG ARG A . n A 1 138 GLU 138 1075 137 GLU GLU A . n A 1 139 ILE 139 1076 138 ILE ILE A . n A 1 140 HIS 140 1077 139 HIS HIS A . n A 1 141 THR 141 1078 140 THR THR A . n A 1 142 ALA 142 1079 141 ALA ALA A . n A 1 143 ASP 143 1080 142 ASP ASP A . n A 1 144 PHE 144 1081 143 PHE PHE A . n A 1 145 LYS 145 1082 144 LYS LYS A . n A 1 146 ARG 146 1083 145 ARG ARG A . n A 1 147 ARG 147 1084 146 ARG ARG A . n A 1 148 GLU 148 1085 147 GLU GLU A . n A 1 149 TYR 149 1086 148 TYR TYR A . n A 1 150 PRO 150 1087 149 PRO PRO A . n A 1 151 ASP 151 1088 150 ASP ASP A . n A 1 152 GLY 152 1089 151 GLY GLY A . n A 1 153 THR 153 1090 152 THR THR A . n A 1 154 VAL 154 1091 153 VAL VAL A . n A 1 155 LYS 155 1092 154 LYS LYS A . n A 1 156 THR 156 1093 155 THR THR A . n A 1 157 VAL 157 1094 156 VAL VAL A . n A 1 158 TYR 158 1095 157 TYR TYR A . n A 1 159 SER 159 1096 158 SER SER A . n A 1 160 ASP 160 1097 159 ASP ASP A . n A 1 161 GLY 161 1098 160 GLY GLY A . n A 1 162 ARG 162 1099 161 ARG ARG A . n A 1 163 GLN 163 1100 162 GLN GLN A . n A 1 164 GLU 164 1101 163 GLU GLU A . n A 1 165 THR 165 1102 164 THR THR A . n A 1 166 GLN 166 1103 165 GLN GLN A . n A 1 167 TYR 167 1104 166 TYR TYR A . n A 1 168 PRO 168 1105 167 PRO PRO A . n A 1 169 THR 169 1106 168 THR THR A . n A 1 170 GLY 170 1107 ? ? ? A . n A 1 171 ARG 171 1108 ? ? ? A . n A 1 172 VAL 172 1109 ? ? ? A . n A 1 173 ARG 173 1110 ? ? ? A . n A 1 174 LEU 174 1111 ? ? ? A . n A 1 175 LYS 175 1112 ? ? ? A . n A 1 176 ASP 176 1113 ? ? ? A . n A 1 177 PRO 177 1114 ? ? ? A . n A 1 178 GLN 178 1115 ? ? ? A . n A 1 179 GLY 179 1116 ? ? ? A . n A 1 180 LYS 180 1117 ? ? ? A . n A 1 181 VAL 181 1118 ? ? ? A . n A 1 182 ILE 182 1119 ? ? ? A . n A 1 183 MET 183 1120 ? ? ? A . n A 1 184 ASP 184 1121 ? ? ? A . n B 2 1 GLY 1 391 ? ? ? B . n B 2 2 PRO 2 392 ? ? ? B . n B 2 3 LEU 3 393 ? ? ? B . n B 2 4 GLY 4 394 ? ? ? B . n B 2 5 SER 5 395 ? ? ? B . n B 2 6 CYS 6 396 ? ? ? B . n B 2 7 TYR 7 397 ? ? ? B . n B 2 8 GLN 8 398 ? ? ? B . n B 2 9 ASN 9 399 ? ? ? B . n B 2 10 LYS 10 400 ? ? ? B . n B 2 11 LEU 11 401 ? ? ? B . n B 2 12 SER 12 402 ? ? ? B . n B 2 13 ILE 13 403 ? ? ? B . n B 2 14 SER 14 404 ? ? ? B . n B 2 15 ASP 15 405 ? ? ? B . n B 2 16 HIS 16 406 ? ? ? B . n B 2 17 ASP 17 407 ? ? ? B . n B 2 18 SER 18 408 ? ? ? B . n B 2 19 GLY 19 409 ? ? ? B . n B 2 20 VAL 20 410 ? ? ? B . n B 2 21 GLU 21 411 ? ? ? B . n B 2 22 ASP 22 412 ? ? ? B . n B 2 23 GLU 23 413 6 GLU GLU B . n B 2 24 ASP 24 414 7 ASP ASP B . n B 2 25 LEU 25 415 8 LEU LEU B . n B 2 26 SER 26 416 9 SER SER B . n B 2 27 PRO 27 417 10 PRO PRO B . n B 2 28 ARG 28 418 11 ARG ARG B . n B 2 29 PRO 29 419 12 PRO PRO B . n B 2 30 SER 30 420 13 SER SER B . n B 2 31 PRO 31 421 14 PRO PRO B . n B 2 32 ASN 32 422 15 ASN ASN B . n B 2 33 PRO 33 423 16 PRO PRO B . n B 2 34 HIS 34 424 17 HIS HIS B . n B 2 35 PRO 35 425 18 PRO PRO B . n B 2 36 VAL 36 426 19 VAL VAL B . n B 2 37 SER 37 427 20 SER SER B . n B 2 38 GLN 38 428 21 GLN GLN B . n B 2 39 GLN 39 429 ? ? ? B . n B 2 40 THR 40 430 ? ? ? B . n B 2 41 LYS 41 431 ? ? ? B . n B 2 42 ARG 42 432 ? ? ? B . n B 2 43 VAL 43 433 ? ? ? B . n B 2 44 HIS 44 434 ? ? ? B . n B 2 45 PRO 45 435 ? ? ? B . n B 2 46 LEU 46 436 ? ? ? B . n B 2 47 VAL 47 437 ? ? ? B . n B 2 48 PRO 48 438 ? ? ? B . n B 2 49 GLU 49 439 ? ? ? B . n B 2 50 LEU 50 440 ? ? ? B . n B 2 51 SER 51 441 ? ? ? B . n B 2 52 MET 52 442 ? ? ? B . n B 2 53 VAL 53 443 ? ? ? B . n B 2 54 LEU 54 444 ? ? ? B . n B 2 55 ASP 55 445 ? ? ? B . n B 2 56 GLY 56 446 ? ? ? B . n B 2 57 SER 57 447 ? ? ? B . n B 2 58 PHE 58 448 ? ? ? B . n B 2 59 LEU 59 449 ? ? ? B . n B 2 60 ASP 60 450 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 IPA 1 1201 1 IPA IPA A . D 3 IPA 1 1202 1 IPA IPA A . E 3 IPA 1 1203 1 IPA IPA A . F 4 GOL 1 1204 1 GOL GOL A . G 5 HOH 1 1301 1 HOH HOH A . G 5 HOH 2 1302 2 HOH HOH A . H 5 HOH 1 501 2 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal XDS 'data scaling' . ? 1 PHASER phasing . ? 2 BUSTER refinement 2.10.0 ? 3 XDS 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _cell.entry_id 4LD3 _cell.length_a 79.396 _cell.length_b 79.396 _cell.length_c 50.561 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 3 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4LD3 _symmetry.space_group_name_H-M 'P 32' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 145 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4LD3 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.36 _exptl_crystal.density_percent_sol 63.38 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '15% w/v PEG 4000, 14% v/v isopropanol, 0.1 M Hepes pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.pdbx_collection_date 2013-05-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I04' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I04 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9795 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4LD3 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 28.87 _reflns.d_resolution_high 2.44 _reflns.number_obs 13643 _reflns.number_all ? _reflns.percent_possible_obs 98 _reflns.pdbx_Rmerge_I_obs 0.066 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 12.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4LD3 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 12304 _refine.ls_number_reflns_all 37469 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.87 _refine.ls_d_res_high 2.44 _refine.ls_percent_reflns_obs 88.53 _refine.ls_R_factor_obs 0.1989 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1981 _refine.ls_R_factor_R_free 0.2144 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.98 _refine.ls_number_reflns_R_free 613 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.9089 _refine.correlation_coeff_Fo_to_Fc_free 0.8936 _refine.B_iso_mean 113.62 _refine.aniso_B[1][1] 31.0582 _refine.aniso_B[2][2] 31.0582 _refine.aniso_B[3][3] -62.1164 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI 0.293 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 4LD3 _refine_analyze.Luzzati_coordinate_error_obs 0.687 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1362 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 18 _refine_hist.number_atoms_solvent 3 _refine_hist.number_atoms_total 1383 _refine_hist.d_res_high 2.44 _refine_hist.d_res_low 28.87 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function t_bond_d 0.010 ? 2.00 1410 'X-RAY DIFFRACTION' HARMONIC t_angle_deg 1.08 ? 2.00 1910 'X-RAY DIFFRACTION' HARMONIC t_dihedral_angle_d ? ? 2.00 639 'X-RAY DIFFRACTION' SINUSOIDAL t_incorr_chiral_ct ? ? ? ? 'X-RAY DIFFRACTION' ? t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_trig_c_planes ? ? 2.00 43 'X-RAY DIFFRACTION' HARMONIC t_gen_planes ? ? 5.00 199 'X-RAY DIFFRACTION' HARMONIC t_it ? ? 20.00 1410 'X-RAY DIFFRACTION' HARMONIC t_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? t_omega_torsion 3.38 ? ? ? 'X-RAY DIFFRACTION' ? t_other_torsion 2.74 ? ? ? 'X-RAY DIFFRACTION' ? t_improper_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_chiral_improper_torsion ? ? 5.00 182 'X-RAY DIFFRACTION' SEMIHARMONIC t_sum_occupancies ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_distance ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_ideal_dist_contact ? ? 4.00 1474 'X-RAY DIFFRACTION' SEMIHARMONIC # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.44 _refine_ls_shell.d_res_low 2.67 _refine_ls_shell.number_reflns_R_work 2310 _refine_ls_shell.R_factor_R_work 0.2407 _refine_ls_shell.percent_reflns_obs 88.53 _refine_ls_shell.R_factor_R_free 0.2338 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 5.33 _refine_ls_shell.number_reflns_R_free 130 _refine_ls_shell.number_reflns_all 2440 _refine_ls_shell.R_factor_all 0.2403 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _database_PDB_matrix.entry_id 4LD3 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4LD3 _struct.title 'Structural analysis of the microcephaly protein CPAP G-box domain suggests a role in centriole elongation.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4LD3 _struct_keywords.pdbx_keywords 'structural protein, protein binding' _struct_keywords.text 'G-box, beta-sheet, Centriole organisation, structural protein, protein binding' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 5 ? H N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP E7FCY1_DANRE E7FCY1 1 ;SDSKIEKMLPDGGRLVVFPNGTRKELSADGQTVKVMFFNGDVKHTMPDQRVIYYYAEAQTTHITYPDGMEVLQFPNNQTE KHFPDGRKEITFPDQTVKTLHPDGREESVLTDGTIIQLNPDGSKVIQFNTGQREIHTADFKRREYPDGTVKTVYSDGRQE TQYPTGRVRLKDPQGKVIMD ; 942 ? 2 UNP STIL_DANRE Q8JGS1 2 NKLSISDHDSGVEDEDLSPRPSPNPHPVSQQTKRVHPLVPELSMVLDGSFLD 398 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4LD3 A 5 ? 184 ? E7FCY1 942 ? 1121 ? 942 1121 2 2 4LD3 B 9 ? 60 ? Q8JGS1 398 ? 449 ? 399 450 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4LD3 GLY A 1 ? UNP E7FCY1 ? ? 'expression tag' 938 1 1 4LD3 PRO A 2 ? UNP E7FCY1 ? ? 'expression tag' 939 2 1 4LD3 LEU A 3 ? UNP E7FCY1 ? ? 'expression tag' 940 3 1 4LD3 GLY A 4 ? UNP E7FCY1 ? ? 'expression tag' 941 4 2 4LD3 GLY B 1 ? UNP Q8JGS1 ? ? 'expression tag' 391 5 2 4LD3 PRO B 2 ? UNP Q8JGS1 ? ? 'expression tag' 392 6 2 4LD3 LEU B 3 ? UNP Q8JGS1 ? ? 'expression tag' 393 7 2 4LD3 GLY B 4 ? UNP Q8JGS1 ? ? 'expression tag' 394 8 2 4LD3 SER B 5 ? UNP Q8JGS1 ? ? 'expression tag' 395 9 2 4LD3 CYS B 6 ? UNP Q8JGS1 ? ? 'expression tag' 396 10 2 4LD3 TYR B 7 ? UNP Q8JGS1 ? ? 'expression tag' 397 11 2 4LD3 GLN B 8 ? UNP Q8JGS1 ? ? 'expression tag' 398 12 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_biol.id _struct_biol.details 1 ? 2 ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 17 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel A 10 11 ? anti-parallel A 11 12 ? anti-parallel A 12 13 ? anti-parallel A 13 14 ? anti-parallel A 14 15 ? anti-parallel A 15 16 ? anti-parallel A 16 17 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 18 ? VAL A 21 ? ARG A 955 VAL A 958 A 2 ARG A 27 ? LEU A 30 ? ARG A 964 LEU A 967 A 3 VAL A 37 ? MET A 40 ? VAL A 974 MET A 977 A 4 VAL A 46 ? THR A 49 ? VAL A 983 THR A 986 A 5 VAL A 55 ? TYR A 59 ? VAL A 992 TYR A 996 A 6 THR A 64 ? THR A 68 ? THR A 1001 THR A 1005 A 7 GLU A 74 ? GLN A 77 ? GLU A 1011 GLN A 1014 A 8 THR A 83 ? HIS A 86 ? THR A 1020 HIS A 1023 A 9 LYS A 92 ? THR A 95 ? LYS A 1029 THR A 1032 A 10 VAL A 101 ? LEU A 104 ? VAL A 1038 LEU A 1041 A 11 GLU A 110 ? VAL A 113 ? GLU A 1047 VAL A 1050 A 12 ILE A 119 ? LEU A 122 ? ILE A 1056 LEU A 1059 A 13 LYS A 128 ? GLN A 131 ? LYS A 1065 GLN A 1068 A 14 ARG A 137 ? HIS A 140 ? ARG A 1074 HIS A 1077 A 15 PHE A 144 ? GLU A 148 ? PHE A 1081 GLU A 1085 A 16 VAL A 154 ? TYR A 158 ? VAL A 1091 TYR A 1095 A 17 GLN A 163 ? GLN A 166 ? GLN A 1100 GLN A 1103 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 20 ? N VAL A 957 O LYS A 28 ? O LYS A 965 A 2 3 N ARG A 27 ? N ARG A 964 O MET A 40 ? O MET A 977 A 3 4 N VAL A 39 ? N VAL A 976 O LYS A 47 ? O LYS A 984 A 4 5 N HIS A 48 ? N HIS A 985 O ILE A 56 ? O ILE A 993 A 5 6 N TYR A 59 ? N TYR A 996 O THR A 64 ? O THR A 1001 A 6 7 N ILE A 67 ? N ILE A 1004 O VAL A 75 ? O VAL A 1012 A 7 8 N GLU A 74 ? N GLU A 1011 O HIS A 86 ? O HIS A 1023 A 8 9 N THR A 83 ? N THR A 1020 O THR A 95 ? O THR A 1032 A 9 10 N ILE A 94 ? N ILE A 1031 O LYS A 102 ? O LYS A 1039 A 10 11 N THR A 103 ? N THR A 1040 O GLU A 111 ? O GLU A 1048 A 11 12 N GLU A 110 ? N GLU A 1047 O LEU A 122 ? O LEU A 1059 A 12 13 N GLN A 121 ? N GLN A 1058 O VAL A 129 ? O VAL A 1066 A 13 14 N ILE A 130 ? N ILE A 1067 O GLU A 138 ? O GLU A 1075 A 14 15 N ARG A 137 ? N ARG A 1074 O GLU A 148 ? O GLU A 1085 A 15 16 N LYS A 145 ? N LYS A 1082 O VAL A 157 ? O VAL A 1094 A 16 17 N THR A 156 ? N THR A 1093 O GLU A 164 ? O GLU A 1101 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A IPA 1201 ? 5 'BINDING SITE FOR RESIDUE IPA A 1201' AC2 Software A IPA 1202 ? 5 'BINDING SITE FOR RESIDUE IPA A 1202' AC3 Software A IPA 1203 ? 7 'BINDING SITE FOR RESIDUE IPA A 1203' AC4 Software A GOL 1204 ? 3 'BINDING SITE FOR RESIDUE GOL A 1204' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 HIS A 48 ? HIS A 985 . ? 1_555 ? 2 AC1 5 GLY A 108 ? GLY A 1045 . ? 2_554 ? 3 AC1 5 GLU A 110 ? GLU A 1047 . ? 2_554 ? 4 AC1 5 LEU A 122 ? LEU A 1059 . ? 2_554 ? 5 AC1 5 ASN A 123 ? ASN A 1060 . ? 2_554 ? 6 AC2 5 ARG A 54 ? ARG A 991 . ? 1_555 ? 7 AC2 5 TYR A 69 ? TYR A 1006 . ? 1_555 ? 8 AC2 5 GLY A 90 ? GLY A 1027 . ? 2_554 ? 9 AC2 5 LYS A 92 ? LYS A 1029 . ? 2_554 ? 10 AC2 5 LEU A 104 ? LEU A 1041 . ? 2_554 ? 11 AC3 7 LYS A 38 ? LYS A 975 . ? 3_555 ? 12 AC3 7 HIS A 48 ? HIS A 985 . ? 3_555 ? 13 AC3 7 LEU A 122 ? LEU A 1059 . ? 1_555 ? 14 AC3 7 ASN A 123 ? ASN A 1060 . ? 1_555 ? 15 AC3 7 GLY A 126 ? GLY A 1063 . ? 1_555 ? 16 AC3 7 SER A 127 ? SER A 1064 . ? 1_555 ? 17 AC3 7 LYS A 128 ? LYS A 1065 . ? 1_555 ? 18 AC4 3 LYS A 38 ? LYS A 975 . ? 3_555 ? 19 AC4 3 GLY A 126 ? GLY A 1063 . ? 1_555 ? 20 AC4 3 LYS A 128 ? LYS A 1065 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 990 ? ? 82.13 1.76 2 1 LEU B 415 ? ? -115.86 59.43 # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 10.3774 _pdbx_refine_tls.origin_y 1.9849 _pdbx_refine_tls.origin_z -7.4509 _pdbx_refine_tls.T[1][1] -0.2678 _pdbx_refine_tls.T[2][2] -0.4610 _pdbx_refine_tls.T[3][3] 0.1555 _pdbx_refine_tls.T[1][2] 0.1926 _pdbx_refine_tls.T[1][3] 0.0378 _pdbx_refine_tls.T[2][3] 0.0506 _pdbx_refine_tls.L[1][1] 4.2693 _pdbx_refine_tls.L[2][2] 13.2609 _pdbx_refine_tls.L[3][3] 2.1996 _pdbx_refine_tls.L[1][2] -7.5254 _pdbx_refine_tls.L[1][3] 2.4241 _pdbx_refine_tls.L[2][3] -2.3380 _pdbx_refine_tls.S[1][1] 0.1636 _pdbx_refine_tls.S[2][2] 0.1898 _pdbx_refine_tls.S[3][3] -0.3533 _pdbx_refine_tls.S[1][2] -0.3353 _pdbx_refine_tls.S[1][3] -0.2775 _pdbx_refine_tls.S[2][3] 0.3308 _pdbx_refine_tls.S[2][1] -0.8618 _pdbx_refine_tls.S[3][1] 0.2188 _pdbx_refine_tls.S[3][2] 0.1261 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 953 A 1106 ;{ A|953 - A|1106 A|1301 - A|1301 A|1201 - A|1201 A|1203 - A|1203 A|1202 - A|1202 A|1302 - A|1302 A|1204 - A|1204 B|413 - B|428 B|501 - B|501 } ; ? ? ? ? ? 'X-RAY DIFFRACTION' 2 1 A 1301 A 1301 ;{ A|953 - A|1106 A|1301 - A|1301 A|1201 - A|1201 A|1203 - A|1203 A|1202 - A|1202 A|1302 - A|1302 A|1204 - A|1204 B|413 - B|428 B|501 - B|501 } ; ? ? ? ? ? 'X-RAY DIFFRACTION' 3 1 A 1201 A 1201 ;{ A|953 - A|1106 A|1301 - A|1301 A|1201 - A|1201 A|1203 - A|1203 A|1202 - A|1202 A|1302 - A|1302 A|1204 - A|1204 B|413 - B|428 B|501 - B|501 } ; ? ? ? ? ? 'X-RAY DIFFRACTION' 4 1 A 1203 A 1203 ;{ A|953 - A|1106 A|1301 - A|1301 A|1201 - A|1201 A|1203 - A|1203 A|1202 - A|1202 A|1302 - A|1302 A|1204 - A|1204 B|413 - B|428 B|501 - B|501 } ; ? ? ? ? ? 'X-RAY DIFFRACTION' 5 1 A 1202 A 1202 ;{ A|953 - A|1106 A|1301 - A|1301 A|1201 - A|1201 A|1203 - A|1203 A|1202 - A|1202 A|1302 - A|1302 A|1204 - A|1204 B|413 - B|428 B|501 - B|501 } ; ? ? ? ? ? 'X-RAY DIFFRACTION' 6 1 A 1302 A 1302 ;{ A|953 - A|1106 A|1301 - A|1301 A|1201 - A|1201 A|1203 - A|1203 A|1202 - A|1202 A|1302 - A|1302 A|1204 - A|1204 B|413 - B|428 B|501 - B|501 } ; ? ? ? ? ? 'X-RAY DIFFRACTION' 7 1 A 1204 A 1204 ;{ A|953 - A|1106 A|1301 - A|1301 A|1201 - A|1201 A|1203 - A|1203 A|1202 - A|1202 A|1302 - A|1302 A|1204 - A|1204 B|413 - B|428 B|501 - B|501 } ; ? ? ? ? ? 'X-RAY DIFFRACTION' 8 1 B 413 B 428 ;{ A|953 - A|1106 A|1301 - A|1301 A|1201 - A|1201 A|1203 - A|1203 A|1202 - A|1202 A|1302 - A|1302 A|1204 - A|1204 B|413 - B|428 B|501 - B|501 } ; ? ? ? ? ? 'X-RAY DIFFRACTION' 9 1 B 501 B 501 ;{ A|953 - A|1106 A|1301 - A|1301 A|1201 - A|1201 A|1203 - A|1203 A|1202 - A|1202 A|1302 - A|1302 A|1204 - A|1204 B|413 - B|428 B|501 - B|501 } ; ? ? ? ? ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 938 ? A GLY 1 2 1 Y 1 A PRO 939 ? A PRO 2 3 1 Y 1 A LEU 940 ? A LEU 3 4 1 Y 1 A GLY 941 ? A GLY 4 5 1 Y 1 A SER 942 ? A SER 5 6 1 Y 1 A ASP 943 ? A ASP 6 7 1 Y 1 A SER 944 ? A SER 7 8 1 Y 1 A LYS 945 ? A LYS 8 9 1 Y 1 A ILE 946 ? A ILE 9 10 1 Y 1 A GLU 947 ? A GLU 10 11 1 Y 1 A LYS 948 ? A LYS 11 12 1 Y 1 A MET 949 ? A MET 12 13 1 Y 1 A LEU 950 ? A LEU 13 14 1 Y 1 A PRO 951 ? A PRO 14 15 1 Y 1 A ASP 952 ? A ASP 15 16 1 Y 1 A GLY 1107 ? A GLY 170 17 1 Y 1 A ARG 1108 ? A ARG 171 18 1 Y 1 A VAL 1109 ? A VAL 172 19 1 Y 1 A ARG 1110 ? A ARG 173 20 1 Y 1 A LEU 1111 ? A LEU 174 21 1 Y 1 A LYS 1112 ? A LYS 175 22 1 Y 1 A ASP 1113 ? A ASP 176 23 1 Y 1 A PRO 1114 ? A PRO 177 24 1 Y 1 A GLN 1115 ? A GLN 178 25 1 Y 1 A GLY 1116 ? A GLY 179 26 1 Y 1 A LYS 1117 ? A LYS 180 27 1 Y 1 A VAL 1118 ? A VAL 181 28 1 Y 1 A ILE 1119 ? A ILE 182 29 1 Y 1 A MET 1120 ? A MET 183 30 1 Y 1 A ASP 1121 ? A ASP 184 31 1 Y 1 B GLY 391 ? B GLY 1 32 1 Y 1 B PRO 392 ? B PRO 2 33 1 Y 1 B LEU 393 ? B LEU 3 34 1 Y 1 B GLY 394 ? B GLY 4 35 1 Y 1 B SER 395 ? B SER 5 36 1 Y 1 B CYS 396 ? B CYS 6 37 1 Y 1 B TYR 397 ? B TYR 7 38 1 Y 1 B GLN 398 ? B GLN 8 39 1 Y 1 B ASN 399 ? B ASN 9 40 1 Y 1 B LYS 400 ? B LYS 10 41 1 Y 1 B LEU 401 ? B LEU 11 42 1 Y 1 B SER 402 ? B SER 12 43 1 Y 1 B ILE 403 ? B ILE 13 44 1 Y 1 B SER 404 ? B SER 14 45 1 Y 1 B ASP 405 ? B ASP 15 46 1 Y 1 B HIS 406 ? B HIS 16 47 1 Y 1 B ASP 407 ? B ASP 17 48 1 Y 1 B SER 408 ? B SER 18 49 1 Y 1 B GLY 409 ? B GLY 19 50 1 Y 1 B VAL 410 ? B VAL 20 51 1 Y 1 B GLU 411 ? B GLU 21 52 1 Y 1 B ASP 412 ? B ASP 22 53 1 Y 1 B GLN 429 ? B GLN 39 54 1 Y 1 B THR 430 ? B THR 40 55 1 Y 1 B LYS 431 ? B LYS 41 56 1 Y 1 B ARG 432 ? B ARG 42 57 1 Y 1 B VAL 433 ? B VAL 43 58 1 Y 1 B HIS 434 ? B HIS 44 59 1 Y 1 B PRO 435 ? B PRO 45 60 1 Y 1 B LEU 436 ? B LEU 46 61 1 Y 1 B VAL 437 ? B VAL 47 62 1 Y 1 B PRO 438 ? B PRO 48 63 1 Y 1 B GLU 439 ? B GLU 49 64 1 Y 1 B LEU 440 ? B LEU 50 65 1 Y 1 B SER 441 ? B SER 51 66 1 Y 1 B MET 442 ? B MET 52 67 1 Y 1 B VAL 443 ? B VAL 53 68 1 Y 1 B LEU 444 ? B LEU 54 69 1 Y 1 B ASP 445 ? B ASP 55 70 1 Y 1 B GLY 446 ? B GLY 56 71 1 Y 1 B SER 447 ? B SER 57 72 1 Y 1 B PHE 448 ? B PHE 58 73 1 Y 1 B LEU 449 ? B LEU 59 74 1 Y 1 B ASP 450 ? B ASP 60 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GOL C1 C N N 137 GOL O1 O N N 138 GOL C2 C N N 139 GOL O2 O N N 140 GOL C3 C N N 141 GOL O3 O N N 142 GOL H11 H N N 143 GOL H12 H N N 144 GOL HO1 H N N 145 GOL H2 H N N 146 GOL HO2 H N N 147 GOL H31 H N N 148 GOL H32 H N N 149 GOL HO3 H N N 150 HIS N N N N 151 HIS CA C N S 152 HIS C C N N 153 HIS O O N N 154 HIS CB C N N 155 HIS CG C Y N 156 HIS ND1 N Y N 157 HIS CD2 C Y N 158 HIS CE1 C Y N 159 HIS NE2 N Y N 160 HIS OXT O N N 161 HIS H H N N 162 HIS H2 H N N 163 HIS HA H N N 164 HIS HB2 H N N 165 HIS HB3 H N N 166 HIS HD1 H N N 167 HIS HD2 H N N 168 HIS HE1 H N N 169 HIS HE2 H N N 170 HIS HXT H N N 171 HOH O O N N 172 HOH H1 H N N 173 HOH H2 H N N 174 ILE N N N N 175 ILE CA C N S 176 ILE C C N N 177 ILE O O N N 178 ILE CB C N S 179 ILE CG1 C N N 180 ILE CG2 C N N 181 ILE CD1 C N N 182 ILE OXT O N N 183 ILE H H N N 184 ILE H2 H N N 185 ILE HA H N N 186 ILE HB H N N 187 ILE HG12 H N N 188 ILE HG13 H N N 189 ILE HG21 H N N 190 ILE HG22 H N N 191 ILE HG23 H N N 192 ILE HD11 H N N 193 ILE HD12 H N N 194 ILE HD13 H N N 195 ILE HXT H N N 196 IPA C1 C N N 197 IPA C2 C N N 198 IPA C3 C N N 199 IPA O2 O N N 200 IPA H11 H N N 201 IPA H12 H N N 202 IPA H13 H N N 203 IPA H2 H N N 204 IPA H31 H N N 205 IPA H32 H N N 206 IPA H33 H N N 207 IPA HO2 H N N 208 LEU N N N N 209 LEU CA C N S 210 LEU C C N N 211 LEU O O N N 212 LEU CB C N N 213 LEU CG C N N 214 LEU CD1 C N N 215 LEU CD2 C N N 216 LEU OXT O N N 217 LEU H H N N 218 LEU H2 H N N 219 LEU HA H N N 220 LEU HB2 H N N 221 LEU HB3 H N N 222 LEU HG H N N 223 LEU HD11 H N N 224 LEU HD12 H N N 225 LEU HD13 H N N 226 LEU HD21 H N N 227 LEU HD22 H N N 228 LEU HD23 H N N 229 LEU HXT H N N 230 LYS N N N N 231 LYS CA C N S 232 LYS C C N N 233 LYS O O N N 234 LYS CB C N N 235 LYS CG C N N 236 LYS CD C N N 237 LYS CE C N N 238 LYS NZ N N N 239 LYS OXT O N N 240 LYS H H N N 241 LYS H2 H N N 242 LYS HA H N N 243 LYS HB2 H N N 244 LYS HB3 H N N 245 LYS HG2 H N N 246 LYS HG3 H N N 247 LYS HD2 H N N 248 LYS HD3 H N N 249 LYS HE2 H N N 250 LYS HE3 H N N 251 LYS HZ1 H N N 252 LYS HZ2 H N N 253 LYS HZ3 H N N 254 LYS HXT H N N 255 MET N N N N 256 MET CA C N S 257 MET C C N N 258 MET O O N N 259 MET CB C N N 260 MET CG C N N 261 MET SD S N N 262 MET CE C N N 263 MET OXT O N N 264 MET H H N N 265 MET H2 H N N 266 MET HA H N N 267 MET HB2 H N N 268 MET HB3 H N N 269 MET HG2 H N N 270 MET HG3 H N N 271 MET HE1 H N N 272 MET HE2 H N N 273 MET HE3 H N N 274 MET HXT H N N 275 PHE N N N N 276 PHE CA C N S 277 PHE C C N N 278 PHE O O N N 279 PHE CB C N N 280 PHE CG C Y N 281 PHE CD1 C Y N 282 PHE CD2 C Y N 283 PHE CE1 C Y N 284 PHE CE2 C Y N 285 PHE CZ C Y N 286 PHE OXT O N N 287 PHE H H N N 288 PHE H2 H N N 289 PHE HA H N N 290 PHE HB2 H N N 291 PHE HB3 H N N 292 PHE HD1 H N N 293 PHE HD2 H N N 294 PHE HE1 H N N 295 PHE HE2 H N N 296 PHE HZ H N N 297 PHE HXT H N N 298 PRO N N N N 299 PRO CA C N S 300 PRO C C N N 301 PRO O O N N 302 PRO CB C N N 303 PRO CG C N N 304 PRO CD C N N 305 PRO OXT O N N 306 PRO H H N N 307 PRO HA H N N 308 PRO HB2 H N N 309 PRO HB3 H N N 310 PRO HG2 H N N 311 PRO HG3 H N N 312 PRO HD2 H N N 313 PRO HD3 H N N 314 PRO HXT H N N 315 SER N N N N 316 SER CA C N S 317 SER C C N N 318 SER O O N N 319 SER CB C N N 320 SER OG O N N 321 SER OXT O N N 322 SER H H N N 323 SER H2 H N N 324 SER HA H N N 325 SER HB2 H N N 326 SER HB3 H N N 327 SER HG H N N 328 SER HXT H N N 329 THR N N N N 330 THR CA C N S 331 THR C C N N 332 THR O O N N 333 THR CB C N R 334 THR OG1 O N N 335 THR CG2 C N N 336 THR OXT O N N 337 THR H H N N 338 THR H2 H N N 339 THR HA H N N 340 THR HB H N N 341 THR HG1 H N N 342 THR HG21 H N N 343 THR HG22 H N N 344 THR HG23 H N N 345 THR HXT H N N 346 TYR N N N N 347 TYR CA C N S 348 TYR C C N N 349 TYR O O N N 350 TYR CB C N N 351 TYR CG C Y N 352 TYR CD1 C Y N 353 TYR CD2 C Y N 354 TYR CE1 C Y N 355 TYR CE2 C Y N 356 TYR CZ C Y N 357 TYR OH O N N 358 TYR OXT O N N 359 TYR H H N N 360 TYR H2 H N N 361 TYR HA H N N 362 TYR HB2 H N N 363 TYR HB3 H N N 364 TYR HD1 H N N 365 TYR HD2 H N N 366 TYR HE1 H N N 367 TYR HE2 H N N 368 TYR HH H N N 369 TYR HXT H N N 370 VAL N N N N 371 VAL CA C N S 372 VAL C C N N 373 VAL O O N N 374 VAL CB C N N 375 VAL CG1 C N N 376 VAL CG2 C N N 377 VAL OXT O N N 378 VAL H H N N 379 VAL H2 H N N 380 VAL HA H N N 381 VAL HB H N N 382 VAL HG11 H N N 383 VAL HG12 H N N 384 VAL HG13 H N N 385 VAL HG21 H N N 386 VAL HG22 H N N 387 VAL HG23 H N N 388 VAL HXT H N N 389 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GOL C1 O1 sing N N 129 GOL C1 C2 sing N N 130 GOL C1 H11 sing N N 131 GOL C1 H12 sing N N 132 GOL O1 HO1 sing N N 133 GOL C2 O2 sing N N 134 GOL C2 C3 sing N N 135 GOL C2 H2 sing N N 136 GOL O2 HO2 sing N N 137 GOL C3 O3 sing N N 138 GOL C3 H31 sing N N 139 GOL C3 H32 sing N N 140 GOL O3 HO3 sing N N 141 HIS N CA sing N N 142 HIS N H sing N N 143 HIS N H2 sing N N 144 HIS CA C sing N N 145 HIS CA CB sing N N 146 HIS CA HA sing N N 147 HIS C O doub N N 148 HIS C OXT sing N N 149 HIS CB CG sing N N 150 HIS CB HB2 sing N N 151 HIS CB HB3 sing N N 152 HIS CG ND1 sing Y N 153 HIS CG CD2 doub Y N 154 HIS ND1 CE1 doub Y N 155 HIS ND1 HD1 sing N N 156 HIS CD2 NE2 sing Y N 157 HIS CD2 HD2 sing N N 158 HIS CE1 NE2 sing Y N 159 HIS CE1 HE1 sing N N 160 HIS NE2 HE2 sing N N 161 HIS OXT HXT sing N N 162 HOH O H1 sing N N 163 HOH O H2 sing N N 164 ILE N CA sing N N 165 ILE N H sing N N 166 ILE N H2 sing N N 167 ILE CA C sing N N 168 ILE CA CB sing N N 169 ILE CA HA sing N N 170 ILE C O doub N N 171 ILE C OXT sing N N 172 ILE CB CG1 sing N N 173 ILE CB CG2 sing N N 174 ILE CB HB sing N N 175 ILE CG1 CD1 sing N N 176 ILE CG1 HG12 sing N N 177 ILE CG1 HG13 sing N N 178 ILE CG2 HG21 sing N N 179 ILE CG2 HG22 sing N N 180 ILE CG2 HG23 sing N N 181 ILE CD1 HD11 sing N N 182 ILE CD1 HD12 sing N N 183 ILE CD1 HD13 sing N N 184 ILE OXT HXT sing N N 185 IPA C1 C2 sing N N 186 IPA C1 H11 sing N N 187 IPA C1 H12 sing N N 188 IPA C1 H13 sing N N 189 IPA C2 C3 sing N N 190 IPA C2 O2 sing N N 191 IPA C2 H2 sing N N 192 IPA C3 H31 sing N N 193 IPA C3 H32 sing N N 194 IPA C3 H33 sing N N 195 IPA O2 HO2 sing N N 196 LEU N CA sing N N 197 LEU N H sing N N 198 LEU N H2 sing N N 199 LEU CA C sing N N 200 LEU CA CB sing N N 201 LEU CA HA sing N N 202 LEU C O doub N N 203 LEU C OXT sing N N 204 LEU CB CG sing N N 205 LEU CB HB2 sing N N 206 LEU CB HB3 sing N N 207 LEU CG CD1 sing N N 208 LEU CG CD2 sing N N 209 LEU CG HG sing N N 210 LEU CD1 HD11 sing N N 211 LEU CD1 HD12 sing N N 212 LEU CD1 HD13 sing N N 213 LEU CD2 HD21 sing N N 214 LEU CD2 HD22 sing N N 215 LEU CD2 HD23 sing N N 216 LEU OXT HXT sing N N 217 LYS N CA sing N N 218 LYS N H sing N N 219 LYS N H2 sing N N 220 LYS CA C sing N N 221 LYS CA CB sing N N 222 LYS CA HA sing N N 223 LYS C O doub N N 224 LYS C OXT sing N N 225 LYS CB CG sing N N 226 LYS CB HB2 sing N N 227 LYS CB HB3 sing N N 228 LYS CG CD sing N N 229 LYS CG HG2 sing N N 230 LYS CG HG3 sing N N 231 LYS CD CE sing N N 232 LYS CD HD2 sing N N 233 LYS CD HD3 sing N N 234 LYS CE NZ sing N N 235 LYS CE HE2 sing N N 236 LYS CE HE3 sing N N 237 LYS NZ HZ1 sing N N 238 LYS NZ HZ2 sing N N 239 LYS NZ HZ3 sing N N 240 LYS OXT HXT sing N N 241 MET N CA sing N N 242 MET N H sing N N 243 MET N H2 sing N N 244 MET CA C sing N N 245 MET CA CB sing N N 246 MET CA HA sing N N 247 MET C O doub N N 248 MET C OXT sing N N 249 MET CB CG sing N N 250 MET CB HB2 sing N N 251 MET CB HB3 sing N N 252 MET CG SD sing N N 253 MET CG HG2 sing N N 254 MET CG HG3 sing N N 255 MET SD CE sing N N 256 MET CE HE1 sing N N 257 MET CE HE2 sing N N 258 MET CE HE3 sing N N 259 MET OXT HXT sing N N 260 PHE N CA sing N N 261 PHE N H sing N N 262 PHE N H2 sing N N 263 PHE CA C sing N N 264 PHE CA CB sing N N 265 PHE CA HA sing N N 266 PHE C O doub N N 267 PHE C OXT sing N N 268 PHE CB CG sing N N 269 PHE CB HB2 sing N N 270 PHE CB HB3 sing N N 271 PHE CG CD1 doub Y N 272 PHE CG CD2 sing Y N 273 PHE CD1 CE1 sing Y N 274 PHE CD1 HD1 sing N N 275 PHE CD2 CE2 doub Y N 276 PHE CD2 HD2 sing N N 277 PHE CE1 CZ doub Y N 278 PHE CE1 HE1 sing N N 279 PHE CE2 CZ sing Y N 280 PHE CE2 HE2 sing N N 281 PHE CZ HZ sing N N 282 PHE OXT HXT sing N N 283 PRO N CA sing N N 284 PRO N CD sing N N 285 PRO N H sing N N 286 PRO CA C sing N N 287 PRO CA CB sing N N 288 PRO CA HA sing N N 289 PRO C O doub N N 290 PRO C OXT sing N N 291 PRO CB CG sing N N 292 PRO CB HB2 sing N N 293 PRO CB HB3 sing N N 294 PRO CG CD sing N N 295 PRO CG HG2 sing N N 296 PRO CG HG3 sing N N 297 PRO CD HD2 sing N N 298 PRO CD HD3 sing N N 299 PRO OXT HXT sing N N 300 SER N CA sing N N 301 SER N H sing N N 302 SER N H2 sing N N 303 SER CA C sing N N 304 SER CA CB sing N N 305 SER CA HA sing N N 306 SER C O doub N N 307 SER C OXT sing N N 308 SER CB OG sing N N 309 SER CB HB2 sing N N 310 SER CB HB3 sing N N 311 SER OG HG sing N N 312 SER OXT HXT sing N N 313 THR N CA sing N N 314 THR N H sing N N 315 THR N H2 sing N N 316 THR CA C sing N N 317 THR CA CB sing N N 318 THR CA HA sing N N 319 THR C O doub N N 320 THR C OXT sing N N 321 THR CB OG1 sing N N 322 THR CB CG2 sing N N 323 THR CB HB sing N N 324 THR OG1 HG1 sing N N 325 THR CG2 HG21 sing N N 326 THR CG2 HG22 sing N N 327 THR CG2 HG23 sing N N 328 THR OXT HXT sing N N 329 TYR N CA sing N N 330 TYR N H sing N N 331 TYR N H2 sing N N 332 TYR CA C sing N N 333 TYR CA CB sing N N 334 TYR CA HA sing N N 335 TYR C O doub N N 336 TYR C OXT sing N N 337 TYR CB CG sing N N 338 TYR CB HB2 sing N N 339 TYR CB HB3 sing N N 340 TYR CG CD1 doub Y N 341 TYR CG CD2 sing Y N 342 TYR CD1 CE1 sing Y N 343 TYR CD1 HD1 sing N N 344 TYR CD2 CE2 doub Y N 345 TYR CD2 HD2 sing N N 346 TYR CE1 CZ doub Y N 347 TYR CE1 HE1 sing N N 348 TYR CE2 CZ sing Y N 349 TYR CE2 HE2 sing N N 350 TYR CZ OH sing N N 351 TYR OH HH sing N N 352 TYR OXT HXT sing N N 353 VAL N CA sing N N 354 VAL N H sing N N 355 VAL N H2 sing N N 356 VAL CA C sing N N 357 VAL CA CB sing N N 358 VAL CA HA sing N N 359 VAL C O doub N N 360 VAL C OXT sing N N 361 VAL CB CG1 sing N N 362 VAL CB CG2 sing N N 363 VAL CB HB sing N N 364 VAL CG1 HG11 sing N N 365 VAL CG1 HG12 sing N N 366 VAL CG1 HG13 sing N N 367 VAL CG2 HG21 sing N N 368 VAL CG2 HG22 sing N N 369 VAL CG2 HG23 sing N N 370 VAL OXT HXT sing N N 371 # _atom_sites.entry_id 4LD3 _atom_sites.fract_transf_matrix[1][1] 0.012595 _atom_sites.fract_transf_matrix[1][2] 0.007272 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014544 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019778 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_