HEADER OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR 25-JUN-13 4LEK TITLE STRUCTURE-BASED DESIGN OF NEW DIHYDROFOLATE REDUCTASE ANTIBACTERIAL TITLE 2 AGENTS: 7-(BENZIMIDAZOL-1-YL)-2,4-DIAMINOQUINAZOLINES COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDROFOLATE REDUCTASE; COMPND 3 CHAIN: X; COMPND 4 SYNONYM: DHFR; COMPND 5 EC: 1.5.1.3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: FOLA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21-AI; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS OXIDOREDUCTASE-OXIDOREDUCTASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.T.HILGERS REVDAT 3 28-FEB-24 4LEK 1 REMARK SEQADV REVDAT 2 26-FEB-14 4LEK 1 JRNL REVDAT 1 19-FEB-14 4LEK 0 JRNL AUTH T.LAM,M.T.HILGERS,M.L.CUNNINGHAM,B.P.KWAN,K.J.NELSON, JRNL AUTH 2 V.BROWN-DRIVER,V.ONG,M.TRZOSS,G.HOUGH,K.J.SHAW,J.FINN JRNL TITL STRUCTURE-BASED DESIGN OF NEW DIHYDROFOLATE REDUCTASE JRNL TITL 2 ANTIBACTERIAL AGENTS: JRNL TITL 3 7-(BENZIMIDAZOL-1-YL)-2,4-DIAMINOQUINAZOLINES. JRNL REF J.MED.CHEM. V. 57 651 2014 JRNL REFN ISSN 0022-2623 JRNL PMID 24428639 JRNL DOI 10.1021/JM401204G REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.25 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 21377 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1155 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1477 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.20 REMARK 3 BIN R VALUE (WORKING SET) : 0.4100 REMARK 3 BIN FREE R VALUE SET COUNT : 71 REMARK 3 BIN FREE R VALUE : 0.4260 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1272 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 78 REMARK 3 SOLVENT ATOMS : 105 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.03000 REMARK 3 B22 (A**2) : -0.03000 REMARK 3 B33 (A**2) : 0.04000 REMARK 3 B12 (A**2) : -0.01000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.107 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.099 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.070 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.029 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1392 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1902 ; 1.585 ; 2.022 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 156 ; 5.688 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 62 ;34.361 ;24.194 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 226 ;12.199 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;18.392 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 207 ; 0.068 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1041 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 611 ; 0.169 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 935 ; 0.303 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 123 ; 0.083 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 33 ; 0.190 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 14 ; 0.153 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 806 ; 0.301 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1282 ; 0.478 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 705 ; 0.789 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 620 ; 1.178 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 2 X 20 REMARK 3 ORIGIN FOR THE GROUP (A): -1.2610 24.5430 -8.6820 REMARK 3 T TENSOR REMARK 3 T11: -0.0315 T22: -0.0883 REMARK 3 T33: -0.0520 T12: -0.0104 REMARK 3 T13: 0.0543 T23: -0.0159 REMARK 3 L TENSOR REMARK 3 L11: 1.6335 L22: 2.3629 REMARK 3 L33: 1.8844 L12: 0.9162 REMARK 3 L13: 0.0662 L23: -0.3381 REMARK 3 S TENSOR REMARK 3 S11: 0.0314 S12: -0.0301 S13: -0.0477 REMARK 3 S21: 0.0791 S22: -0.0259 S23: -0.0075 REMARK 3 S31: -0.1607 S32: -0.0432 S33: -0.0056 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 21 X 57 REMARK 3 ORIGIN FOR THE GROUP (A): -5.6950 33.8630 -3.2050 REMARK 3 T TENSOR REMARK 3 T11: 0.0686 T22: -0.0770 REMARK 3 T33: 0.0205 T12: 0.0115 REMARK 3 T13: 0.1187 T23: -0.0276 REMARK 3 L TENSOR REMARK 3 L11: 1.1390 L22: 1.9462 REMARK 3 L33: 1.4074 L12: 1.4208 REMARK 3 L13: 0.1282 L23: -0.3323 REMARK 3 S TENSOR REMARK 3 S11: 0.2085 S12: -0.0559 S13: 0.2791 REMARK 3 S21: 0.2118 S22: -0.0829 S23: 0.3424 REMARK 3 S31: -0.3959 S32: -0.0956 S33: -0.1256 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 58 X 85 REMARK 3 ORIGIN FOR THE GROUP (A): 7.6450 37.5780 4.3800 REMARK 3 T TENSOR REMARK 3 T11: 0.1875 T22: -0.0516 REMARK 3 T33: -0.0927 T12: -0.1321 REMARK 3 T13: 0.0152 T23: -0.0394 REMARK 3 L TENSOR REMARK 3 L11: 4.3053 L22: 4.4998 REMARK 3 L33: 1.5692 L12: 2.9898 REMARK 3 L13: -2.1650 L23: -1.5428 REMARK 3 S TENSOR REMARK 3 S11: 0.4541 S12: -0.3673 S13: 0.2191 REMARK 3 S21: 0.9418 S22: -0.4762 S23: -0.1762 REMARK 3 S31: -0.1960 S32: 0.1516 S33: 0.0221 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 86 X 123 REMARK 3 ORIGIN FOR THE GROUP (A): 0.2890 23.9330 -3.1170 REMARK 3 T TENSOR REMARK 3 T11: -0.0197 T22: -0.0841 REMARK 3 T33: -0.0491 T12: -0.0218 REMARK 3 T13: 0.0405 T23: -0.0026 REMARK 3 L TENSOR REMARK 3 L11: 1.5838 L22: 1.7343 REMARK 3 L33: 2.0784 L12: 1.1025 REMARK 3 L13: -0.2445 L23: -0.1839 REMARK 3 S TENSOR REMARK 3 S11: 0.1180 S12: -0.1326 S13: -0.0998 REMARK 3 S21: 0.2115 S22: -0.0818 S23: -0.1257 REMARK 3 S31: -0.2053 S32: 0.0336 S33: -0.0362 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 124 X 130 REMARK 3 ORIGIN FOR THE GROUP (A): 0.9310 13.1620 -4.1680 REMARK 3 T TENSOR REMARK 3 T11: 0.0539 T22: -0.0773 REMARK 3 T33: 0.0439 T12: 0.0020 REMARK 3 T13: 0.0604 T23: 0.0292 REMARK 3 L TENSOR REMARK 3 L11: 8.1873 L22: 12.4286 REMARK 3 L33: 9.0281 L12: -0.5335 REMARK 3 L13: -2.6647 L23: -4.4005 REMARK 3 S TENSOR REMARK 3 S11: -0.3630 S12: -0.2341 S13: -0.9177 REMARK 3 S21: 0.2018 S22: 0.0658 S23: -0.2263 REMARK 3 S31: 0.8573 S32: 0.0559 S33: 0.2972 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 131 X 158 REMARK 3 ORIGIN FOR THE GROUP (A): -11.7400 18.5550 -3.7680 REMARK 3 T TENSOR REMARK 3 T11: -0.0730 T22: -0.0824 REMARK 3 T33: -0.0793 T12: 0.0011 REMARK 3 T13: 0.0562 T23: 0.0202 REMARK 3 L TENSOR REMARK 3 L11: 3.9065 L22: 3.6561 REMARK 3 L33: 7.9642 L12: -0.3249 REMARK 3 L13: 2.7487 L23: -3.2575 REMARK 3 S TENSOR REMARK 3 S11: -0.0471 S12: -0.0332 S13: 0.1029 REMARK 3 S21: 0.0155 S22: 0.0891 S23: 0.0592 REMARK 3 S31: -0.1203 S32: -0.2941 S33: -0.0420 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 201 X 201 REMARK 3 ORIGIN FOR THE GROUP (A): 6.8680 31.5570 -6.1450 REMARK 3 T TENSOR REMARK 3 T11: 0.0380 T22: -0.0552 REMARK 3 T33: -0.0034 T12: -0.0571 REMARK 3 T13: 0.0525 T23: -0.0237 REMARK 3 L TENSOR REMARK 3 L11: 3.4920 L22: 2.9712 REMARK 3 L33: 1.7012 L12: 2.6259 REMARK 3 L13: 0.1391 L23: -1.1953 REMARK 3 S TENSOR REMARK 3 S11: 0.1175 S12: -0.0860 S13: 0.1530 REMARK 3 S21: 0.2417 S22: -0.1945 S23: 0.0528 REMARK 3 S31: -0.1501 S32: 0.1083 S33: 0.0770 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4LEK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1000080530. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21377 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 21.072 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.1 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, SODIUM ACETATE, PH 7.2, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 35.83200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 71.66400 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 53.74800 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 89.58000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 17.91600 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 35.83200 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 71.66400 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 89.58000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 53.74800 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 17.91600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET X 1 REMARK 465 LYS X 159 REMARK 465 LEU X 160 REMARK 465 GLU X 161 REMARK 465 HIS X 162 REMARK 465 HIS X 163 REMARK 465 HIS X 164 REMARK 465 HIS X 165 REMARK 465 HIS X 166 REMARK 465 HIS X 167 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS X 39 -161.37 -117.63 REMARK 500 ASN X 70 84.19 -153.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP X 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1DN X 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4LAE RELATED DB: PDB REMARK 900 RELATED ID: 4LAG RELATED DB: PDB REMARK 900 RELATED ID: 4LAH RELATED DB: PDB DBREF 4LEK X 1 159 UNP P0A017 DYR_STAAU 1 159 SEQADV 4LEK LEU X 160 UNP P0A017 EXPRESSION TAG SEQADV 4LEK GLU X 161 UNP P0A017 EXPRESSION TAG SEQADV 4LEK HIS X 162 UNP P0A017 EXPRESSION TAG SEQADV 4LEK HIS X 163 UNP P0A017 EXPRESSION TAG SEQADV 4LEK HIS X 164 UNP P0A017 EXPRESSION TAG SEQADV 4LEK HIS X 165 UNP P0A017 EXPRESSION TAG SEQADV 4LEK HIS X 166 UNP P0A017 EXPRESSION TAG SEQADV 4LEK HIS X 167 UNP P0A017 EXPRESSION TAG SEQRES 1 X 167 MET THR LEU SER ILE LEU VAL ALA HIS ASP LEU GLN ARG SEQRES 2 X 167 VAL ILE GLY PHE GLU ASN GLN LEU PRO TRP HIS LEU PRO SEQRES 3 X 167 ASN ASP LEU LYS HIS VAL LYS LYS LEU SER THR GLY HIS SEQRES 4 X 167 THR LEU VAL MET GLY ARG LYS THR PHE GLU SER ILE GLY SEQRES 5 X 167 LYS PRO LEU PRO ASN ARG ARG ASN VAL VAL LEU THR SER SEQRES 6 X 167 ASP THR SER PHE ASN VAL GLU GLY VAL ASP VAL ILE HIS SEQRES 7 X 167 SER ILE GLU ASP ILE TYR GLN LEU PRO GLY HIS VAL PHE SEQRES 8 X 167 ILE PHE GLY GLY GLN THR LEU PHE GLU GLU MET ILE ASP SEQRES 9 X 167 LYS VAL ASP ASP MET TYR ILE THR VAL ILE GLU GLY LYS SEQRES 10 X 167 PHE ARG GLY ASP THR PHE PHE PRO PRO TYR THR PHE GLU SEQRES 11 X 167 ASP TRP GLU VAL ALA SER SER VAL GLU GLY LYS LEU ASP SEQRES 12 X 167 GLU LYS ASN THR ILE PRO HIS THR PHE LEU HIS LEU ILE SEQRES 13 X 167 ARG LYS LYS LEU GLU HIS HIS HIS HIS HIS HIS HET NAP X 201 48 HET 1DN X 202 30 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM 1DN 7-[5,6-DIMETHOXY-2-(1,3-THIAZOL-2-YL)-1H-BENZIMIDAZOL- HETNAM 2 1DN 1-YL]QUINAZOLINE-2,4-DIAMINE HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 2 NAP C21 H28 N7 O17 P3 FORMUL 3 1DN C20 H17 N7 O2 S FORMUL 4 HOH *105(H2 O) HELIX 1 1 LEU X 25 THR X 37 1 13 HELIX 2 2 ARG X 45 GLY X 52 1 8 HELIX 3 3 SER X 79 LEU X 86 5 8 HELIX 4 4 GLY X 95 ILE X 103 1 9 SHEET 1 A 8 ASP X 75 ILE X 77 0 SHEET 2 A 8 ARG X 59 LEU X 63 1 N ASN X 60 O ASP X 75 SHEET 3 A 8 THR X 40 GLY X 44 1 N LEU X 41 O ARG X 59 SHEET 4 A 8 VAL X 90 GLY X 94 1 O PHE X 93 N VAL X 42 SHEET 5 A 8 LEU X 3 ASP X 10 1 N SER X 4 O ILE X 92 SHEET 6 A 8 ASP X 108 ILE X 114 1 O TYR X 110 N ILE X 5 SHEET 7 A 8 HIS X 150 ARG X 157 -1 O LEU X 153 N ILE X 111 SHEET 8 A 8 TRP X 132 GLU X 139 -1 N GLU X 133 O ILE X 156 SHEET 1 B 2 VAL X 14 GLY X 16 0 SHEET 2 B 2 THR X 122 PHE X 123 -1 O THR X 122 N ILE X 15 CISPEP 1 GLY X 94 GLY X 95 0 -0.36 SITE 1 AC1 31 VAL X 7 ALA X 8 ILE X 15 GLY X 16 SITE 2 AC1 31 ASN X 19 GLN X 20 LEU X 21 GLY X 44 SITE 3 AC1 31 ARG X 45 LYS X 46 THR X 47 LEU X 63 SITE 4 AC1 31 THR X 64 SER X 65 HIS X 78 ILE X 80 SITE 5 AC1 31 PHE X 93 GLY X 95 GLN X 96 THR X 97 SITE 6 AC1 31 LEU X 98 GLU X 101 THR X 122 1DN X 202 SITE 7 AC1 31 HOH X 304 HOH X 344 HOH X 354 HOH X 366 SITE 8 AC1 31 HOH X 367 HOH X 389 HOH X 390 SITE 1 AC2 10 LEU X 6 VAL X 7 ALA X 8 LEU X 21 SITE 2 AC2 10 ASP X 28 LEU X 29 VAL X 32 PHE X 93 SITE 3 AC2 10 NAP X 201 HOH X 385 CRYST1 79.346 79.346 107.496 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012603 0.007276 0.000000 0.00000 SCALE2 0.000000 0.014553 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009303 0.00000