data_4LGM # _entry.id 4LGM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4LGM pdb_00004lgm 10.2210/pdb4lgm/pdb RCSB RCSB080604 ? ? WWPDB D_1000080604 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-11-06 2 'Structure model' 1 1 2013-11-13 3 'Structure model' 1 2 2014-02-05 4 'Structure model' 1 3 2015-04-22 5 'Structure model' 1 4 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Structure summary' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' struct_ref_seq_dif 5 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_ref_seq_dif.details' 4 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 4LGM _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-06-28 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Han, H.' 1 'Hill, C.P.' 2 'Whitby, F.G.' 3 'Monroe, N.' 4 # _citation.id primary _citation.title 'The Oligomeric State of the Active Vps4 AAA ATPase.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 426 _citation.page_first 510 _citation.page_last 525 _citation.year 2014 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24161953 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2013.09.043 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Monroe, N.' 1 ? primary 'Han, H.' 2 ? primary 'Gonciarz, M.D.' 3 ? primary 'Eckert, D.M.' 4 ? primary 'Karren, M.A.' 5 ? primary 'Whitby, F.G.' 6 ? primary 'Sundquist, W.I.' 7 ? primary 'Hill, C.P.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Vps4 AAA ATPase' 33569.797 1 3.6.4.6 E206Q 'UNP residues 85-372' ? 2 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 3 water nat water 18.015 9 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPIDPFTNTSPPEEVVITEKPKVSFKDIVGLDDVKEALREAIIYPTKRPDLFPLGWPRGILLYGPPGCGKTMIAAAVANE IDSIFMQLDAASVMSKWLGEAEKNVANVFKMAREESKKQNKPAIIFIDQLDALLGVYSTEVGGEARVRNQFLKEMDGLLD KSENYKVYVIGATNKPWRLDEAFLRRFQKRIYVPLPDYEQRLSLFKYYTSKIKLDTEVSLEELAKLTEGYTASDIRDIVQ AAHIKVVKEMFKNNLGEPRTITLQDFKDILKVRMPSVNPELIKAYEAWTEKFKAL ; _entity_poly.pdbx_seq_one_letter_code_can ;GPIDPFTNTSPPEEVVITEKPKVSFKDIVGLDDVKEALREAIIYPTKRPDLFPLGWPRGILLYGPPGCGKTMIAAAVANE IDSIFMQLDAASVMSKWLGEAEKNVANVFKMAREESKKQNKPAIIFIDQLDALLGVYSTEVGGEARVRNQFLKEMDGLLD KSENYKVYVIGATNKPWRLDEAFLRRFQKRIYVPLPDYEQRLSLFKYYTSKIKLDTEVSLEELAKLTEGYTASDIRDIVQ AAHIKVVKEMFKNNLGEPRTITLQDFKDILKVRMPSVNPELIKAYEAWTEKFKAL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 ILE n 1 4 ASP n 1 5 PRO n 1 6 PHE n 1 7 THR n 1 8 ASN n 1 9 THR n 1 10 SER n 1 11 PRO n 1 12 PRO n 1 13 GLU n 1 14 GLU n 1 15 VAL n 1 16 VAL n 1 17 ILE n 1 18 THR n 1 19 GLU n 1 20 LYS n 1 21 PRO n 1 22 LYS n 1 23 VAL n 1 24 SER n 1 25 PHE n 1 26 LYS n 1 27 ASP n 1 28 ILE n 1 29 VAL n 1 30 GLY n 1 31 LEU n 1 32 ASP n 1 33 ASP n 1 34 VAL n 1 35 LYS n 1 36 GLU n 1 37 ALA n 1 38 LEU n 1 39 ARG n 1 40 GLU n 1 41 ALA n 1 42 ILE n 1 43 ILE n 1 44 TYR n 1 45 PRO n 1 46 THR n 1 47 LYS n 1 48 ARG n 1 49 PRO n 1 50 ASP n 1 51 LEU n 1 52 PHE n 1 53 PRO n 1 54 LEU n 1 55 GLY n 1 56 TRP n 1 57 PRO n 1 58 ARG n 1 59 GLY n 1 60 ILE n 1 61 LEU n 1 62 LEU n 1 63 TYR n 1 64 GLY n 1 65 PRO n 1 66 PRO n 1 67 GLY n 1 68 CYS n 1 69 GLY n 1 70 LYS n 1 71 THR n 1 72 MET n 1 73 ILE n 1 74 ALA n 1 75 ALA n 1 76 ALA n 1 77 VAL n 1 78 ALA n 1 79 ASN n 1 80 GLU n 1 81 ILE n 1 82 ASP n 1 83 SER n 1 84 ILE n 1 85 PHE n 1 86 MET n 1 87 GLN n 1 88 LEU n 1 89 ASP n 1 90 ALA n 1 91 ALA n 1 92 SER n 1 93 VAL n 1 94 MET n 1 95 SER n 1 96 LYS n 1 97 TRP n 1 98 LEU n 1 99 GLY n 1 100 GLU n 1 101 ALA n 1 102 GLU n 1 103 LYS n 1 104 ASN n 1 105 VAL n 1 106 ALA n 1 107 ASN n 1 108 VAL n 1 109 PHE n 1 110 LYS n 1 111 MET n 1 112 ALA n 1 113 ARG n 1 114 GLU n 1 115 GLU n 1 116 SER n 1 117 LYS n 1 118 LYS n 1 119 GLN n 1 120 ASN n 1 121 LYS n 1 122 PRO n 1 123 ALA n 1 124 ILE n 1 125 ILE n 1 126 PHE n 1 127 ILE n 1 128 ASP n 1 129 GLN n 1 130 LEU n 1 131 ASP n 1 132 ALA n 1 133 LEU n 1 134 LEU n 1 135 GLY n 1 136 VAL n 1 137 TYR n 1 138 SER n 1 139 THR n 1 140 GLU n 1 141 VAL n 1 142 GLY n 1 143 GLY n 1 144 GLU n 1 145 ALA n 1 146 ARG n 1 147 VAL n 1 148 ARG n 1 149 ASN n 1 150 GLN n 1 151 PHE n 1 152 LEU n 1 153 LYS n 1 154 GLU n 1 155 MET n 1 156 ASP n 1 157 GLY n 1 158 LEU n 1 159 LEU n 1 160 ASP n 1 161 LYS n 1 162 SER n 1 163 GLU n 1 164 ASN n 1 165 TYR n 1 166 LYS n 1 167 VAL n 1 168 TYR n 1 169 VAL n 1 170 ILE n 1 171 GLY n 1 172 ALA n 1 173 THR n 1 174 ASN n 1 175 LYS n 1 176 PRO n 1 177 TRP n 1 178 ARG n 1 179 LEU n 1 180 ASP n 1 181 GLU n 1 182 ALA n 1 183 PHE n 1 184 LEU n 1 185 ARG n 1 186 ARG n 1 187 PHE n 1 188 GLN n 1 189 LYS n 1 190 ARG n 1 191 ILE n 1 192 TYR n 1 193 VAL n 1 194 PRO n 1 195 LEU n 1 196 PRO n 1 197 ASP n 1 198 TYR n 1 199 GLU n 1 200 GLN n 1 201 ARG n 1 202 LEU n 1 203 SER n 1 204 LEU n 1 205 PHE n 1 206 LYS n 1 207 TYR n 1 208 TYR n 1 209 THR n 1 210 SER n 1 211 LYS n 1 212 ILE n 1 213 LYS n 1 214 LEU n 1 215 ASP n 1 216 THR n 1 217 GLU n 1 218 VAL n 1 219 SER n 1 220 LEU n 1 221 GLU n 1 222 GLU n 1 223 LEU n 1 224 ALA n 1 225 LYS n 1 226 LEU n 1 227 THR n 1 228 GLU n 1 229 GLY n 1 230 TYR n 1 231 THR n 1 232 ALA n 1 233 SER n 1 234 ASP n 1 235 ILE n 1 236 ARG n 1 237 ASP n 1 238 ILE n 1 239 VAL n 1 240 GLN n 1 241 ALA n 1 242 ALA n 1 243 HIS n 1 244 ILE n 1 245 LYS n 1 246 VAL n 1 247 VAL n 1 248 LYS n 1 249 GLU n 1 250 MET n 1 251 PHE n 1 252 LYS n 1 253 ASN n 1 254 ASN n 1 255 LEU n 1 256 GLY n 1 257 GLU n 1 258 PRO n 1 259 ARG n 1 260 THR n 1 261 ILE n 1 262 THR n 1 263 LEU n 1 264 GLN n 1 265 ASP n 1 266 PHE n 1 267 LYS n 1 268 ASP n 1 269 ILE n 1 270 LEU n 1 271 LYS n 1 272 VAL n 1 273 ARG n 1 274 MET n 1 275 PRO n 1 276 SER n 1 277 VAL n 1 278 ASN n 1 279 PRO n 1 280 GLU n 1 281 LEU n 1 282 ILE n 1 283 LYS n 1 284 ALA n 1 285 TYR n 1 286 GLU n 1 287 ALA n 1 288 TRP n 1 289 THR n 1 290 GLU n 1 291 LYS n 1 292 PHE n 1 293 LYS n 1 294 ALA n 1 295 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene SSO0909 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 35092 / DSM 1617 / JCM 11322 / P2' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Sulfolobus solfataricus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 273057 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector pET151D _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -6 ? ? ? A . n A 1 2 PRO 2 -5 ? ? ? A . n A 1 3 ILE 3 -4 ? ? ? A . n A 1 4 ASP 4 -3 ? ? ? A . n A 1 5 PRO 5 -2 ? ? ? A . n A 1 6 PHE 6 -1 ? ? ? A . n A 1 7 THR 7 0 ? ? ? A . n A 1 8 ASN 8 85 ? ? ? A . n A 1 9 THR 9 86 ? ? ? A . n A 1 10 SER 10 87 ? ? ? A . n A 1 11 PRO 11 88 ? ? ? A . n A 1 12 PRO 12 89 ? ? ? A . n A 1 13 GLU 13 90 ? ? ? A . n A 1 14 GLU 14 91 ? ? ? A . n A 1 15 VAL 15 92 ? ? ? A . n A 1 16 VAL 16 93 ? ? ? A . n A 1 17 ILE 17 94 ? ? ? A . n A 1 18 THR 18 95 ? ? ? A . n A 1 19 GLU 19 96 ? ? ? A . n A 1 20 LYS 20 97 ? ? ? A . n A 1 21 PRO 21 98 ? ? ? A . n A 1 22 LYS 22 99 99 LYS LYS A . n A 1 23 VAL 23 100 100 VAL VAL A . n A 1 24 SER 24 101 101 SER SER A . n A 1 25 PHE 25 102 102 PHE PHE A . n A 1 26 LYS 26 103 103 LYS LYS A . n A 1 27 ASP 27 104 104 ASP ASP A . n A 1 28 ILE 28 105 105 ILE ILE A . n A 1 29 VAL 29 106 106 VAL VAL A . n A 1 30 GLY 30 107 107 GLY GLY A . n A 1 31 LEU 31 108 108 LEU LEU A . n A 1 32 ASP 32 109 109 ASP ASP A . n A 1 33 ASP 33 110 110 ASP ASP A . n A 1 34 VAL 34 111 111 VAL VAL A . n A 1 35 LYS 35 112 112 LYS LYS A . n A 1 36 GLU 36 113 113 GLU GLU A . n A 1 37 ALA 37 114 114 ALA ALA A . n A 1 38 LEU 38 115 115 LEU LEU A . n A 1 39 ARG 39 116 116 ARG ARG A . n A 1 40 GLU 40 117 117 GLU GLU A . n A 1 41 ALA 41 118 118 ALA ALA A . n A 1 42 ILE 42 119 119 ILE ILE A . n A 1 43 ILE 43 120 120 ILE ILE A . n A 1 44 TYR 44 121 121 TYR TYR A . n A 1 45 PRO 45 122 122 PRO PRO A . n A 1 46 THR 46 123 123 THR THR A . n A 1 47 LYS 47 124 124 LYS LYS A . n A 1 48 ARG 48 125 125 ARG ARG A . n A 1 49 PRO 49 126 126 PRO PRO A . n A 1 50 ASP 50 127 127 ASP ASP A . n A 1 51 LEU 51 128 128 LEU LEU A . n A 1 52 PHE 52 129 129 PHE PHE A . n A 1 53 PRO 53 130 130 PRO PRO A . n A 1 54 LEU 54 131 131 LEU LEU A . n A 1 55 GLY 55 132 132 GLY GLY A . n A 1 56 TRP 56 133 133 TRP TRP A . n A 1 57 PRO 57 134 134 PRO PRO A . n A 1 58 ARG 58 135 135 ARG ARG A . n A 1 59 GLY 59 136 136 GLY GLY A . n A 1 60 ILE 60 137 137 ILE ILE A . n A 1 61 LEU 61 138 138 LEU LEU A . n A 1 62 LEU 62 139 139 LEU LEU A . n A 1 63 TYR 63 140 140 TYR TYR A . n A 1 64 GLY 64 141 141 GLY GLY A . n A 1 65 PRO 65 142 142 PRO PRO A . n A 1 66 PRO 66 143 143 PRO PRO A . n A 1 67 GLY 67 144 144 GLY GLY A . n A 1 68 CYS 68 145 145 CYS CYS A . n A 1 69 GLY 69 146 146 GLY GLY A . n A 1 70 LYS 70 147 147 LYS LYS A . n A 1 71 THR 71 148 148 THR THR A . n A 1 72 MET 72 149 149 MET MET A . n A 1 73 ILE 73 150 150 ILE ILE A . n A 1 74 ALA 74 151 151 ALA ALA A . n A 1 75 ALA 75 152 152 ALA ALA A . n A 1 76 ALA 76 153 153 ALA ALA A . n A 1 77 VAL 77 154 154 VAL VAL A . n A 1 78 ALA 78 155 155 ALA ALA A . n A 1 79 ASN 79 156 156 ASN ASN A . n A 1 80 GLU 80 157 157 GLU GLU A . n A 1 81 ILE 81 158 158 ILE ILE A . n A 1 82 ASP 82 159 159 ASP ASP A . n A 1 83 SER 83 160 160 SER SER A . n A 1 84 ILE 84 161 161 ILE ILE A . n A 1 85 PHE 85 162 162 PHE PHE A . n A 1 86 MET 86 163 163 MET MET A . n A 1 87 GLN 87 164 164 GLN GLN A . n A 1 88 LEU 88 165 165 LEU LEU A . n A 1 89 ASP 89 166 166 ASP ASP A . n A 1 90 ALA 90 167 167 ALA ALA A . n A 1 91 ALA 91 168 168 ALA ALA A . n A 1 92 SER 92 169 169 SER SER A . n A 1 93 VAL 93 170 170 VAL VAL A . n A 1 94 MET 94 171 171 MET MET A . n A 1 95 SER 95 172 172 SER SER A . n A 1 96 LYS 96 173 ? ? ? A . n A 1 97 TRP 97 174 ? ? ? A . n A 1 98 LEU 98 175 ? ? ? A . n A 1 99 GLY 99 176 176 GLY GLY A . n A 1 100 GLU 100 177 177 GLU GLU A . n A 1 101 ALA 101 178 178 ALA ALA A . n A 1 102 GLU 102 179 179 GLU GLU A . n A 1 103 LYS 103 180 180 LYS LYS A . n A 1 104 ASN 104 181 181 ASN ASN A . n A 1 105 VAL 105 182 182 VAL VAL A . n A 1 106 ALA 106 183 183 ALA ALA A . n A 1 107 ASN 107 184 184 ASN ASN A . n A 1 108 VAL 108 185 185 VAL VAL A . n A 1 109 PHE 109 186 186 PHE PHE A . n A 1 110 LYS 110 187 187 LYS LYS A . n A 1 111 MET 111 188 188 MET MET A . n A 1 112 ALA 112 189 189 ALA ALA A . n A 1 113 ARG 113 190 190 ARG ARG A . n A 1 114 GLU 114 191 191 GLU GLU A . n A 1 115 GLU 115 192 192 GLU GLU A . n A 1 116 SER 116 193 193 SER SER A . n A 1 117 LYS 117 194 194 LYS LYS A . n A 1 118 LYS 118 195 195 LYS LYS A . n A 1 119 GLN 119 196 196 GLN GLN A . n A 1 120 ASN 120 197 197 ASN ASN A . n A 1 121 LYS 121 198 198 LYS LYS A . n A 1 122 PRO 122 199 199 PRO PRO A . n A 1 123 ALA 123 200 200 ALA ALA A . n A 1 124 ILE 124 201 201 ILE ILE A . n A 1 125 ILE 125 202 202 ILE ILE A . n A 1 126 PHE 126 203 203 PHE PHE A . n A 1 127 ILE 127 204 204 ILE ILE A . n A 1 128 ASP 128 205 205 ASP ASP A . n A 1 129 GLN 129 206 206 GLN GLN A . n A 1 130 LEU 130 207 207 LEU LEU A . n A 1 131 ASP 131 208 208 ASP ASP A . n A 1 132 ALA 132 209 209 ALA ALA A . n A 1 133 LEU 133 210 210 LEU LEU A . n A 1 134 LEU 134 211 211 LEU LEU A . n A 1 135 GLY 135 212 ? ? ? A . n A 1 136 VAL 136 213 ? ? ? A . n A 1 137 TYR 137 214 ? ? ? A . n A 1 138 SER 138 215 ? ? ? A . n A 1 139 THR 139 216 ? ? ? A . n A 1 140 GLU 140 217 ? ? ? A . n A 1 141 VAL 141 218 ? ? ? A . n A 1 142 GLY 142 219 ? ? ? A . n A 1 143 GLY 143 220 ? ? ? A . n A 1 144 GLU 144 221 ? ? ? A . n A 1 145 ALA 145 222 222 ALA ALA A . n A 1 146 ARG 146 223 223 ARG ARG A . n A 1 147 VAL 147 224 224 VAL VAL A . n A 1 148 ARG 148 225 225 ARG ARG A . n A 1 149 ASN 149 226 226 ASN ASN A . n A 1 150 GLN 150 227 227 GLN GLN A . n A 1 151 PHE 151 228 228 PHE PHE A . n A 1 152 LEU 152 229 229 LEU LEU A . n A 1 153 LYS 153 230 230 LYS LYS A . n A 1 154 GLU 154 231 231 GLU GLU A . n A 1 155 MET 155 232 232 MET MET A . n A 1 156 ASP 156 233 233 ASP ASP A . n A 1 157 GLY 157 234 234 GLY GLY A . n A 1 158 LEU 158 235 235 LEU LEU A . n A 1 159 LEU 159 236 236 LEU LEU A . n A 1 160 ASP 160 237 ? ? ? A . n A 1 161 LYS 161 238 ? ? ? A . n A 1 162 SER 162 239 ? ? ? A . n A 1 163 GLU 163 240 ? ? ? A . n A 1 164 ASN 164 241 ? ? ? A . n A 1 165 TYR 165 242 ? ? ? A . n A 1 166 LYS 166 243 ? ? ? A . n A 1 167 VAL 167 244 244 VAL VAL A . n A 1 168 TYR 168 245 245 TYR TYR A . n A 1 169 VAL 169 246 246 VAL VAL A . n A 1 170 ILE 170 247 247 ILE ILE A . n A 1 171 GLY 171 248 248 GLY GLY A . n A 1 172 ALA 172 249 249 ALA ALA A . n A 1 173 THR 173 250 250 THR THR A . n A 1 174 ASN 174 251 251 ASN ASN A . n A 1 175 LYS 175 252 252 LYS LYS A . n A 1 176 PRO 176 253 253 PRO PRO A . n A 1 177 TRP 177 254 254 TRP TRP A . n A 1 178 ARG 178 255 255 ARG ARG A . n A 1 179 LEU 179 256 256 LEU LEU A . n A 1 180 ASP 180 257 257 ASP ASP A . n A 1 181 GLU 181 258 258 GLU GLU A . n A 1 182 ALA 182 259 259 ALA ALA A . n A 1 183 PHE 183 260 260 PHE PHE A . n A 1 184 LEU 184 261 261 LEU LEU A . n A 1 185 ARG 185 262 262 ARG ARG A . n A 1 186 ARG 186 263 263 ARG ARG A . n A 1 187 PHE 187 264 264 PHE PHE A . n A 1 188 GLN 188 265 265 GLN GLN A . n A 1 189 LYS 189 266 266 LYS LYS A . n A 1 190 ARG 190 267 267 ARG ARG A . n A 1 191 ILE 191 268 268 ILE ILE A . n A 1 192 TYR 192 269 269 TYR TYR A . n A 1 193 VAL 193 270 270 VAL VAL A . n A 1 194 PRO 194 271 271 PRO PRO A . n A 1 195 LEU 195 272 272 LEU LEU A . n A 1 196 PRO 196 273 273 PRO PRO A . n A 1 197 ASP 197 274 274 ASP ASP A . n A 1 198 TYR 198 275 275 TYR TYR A . n A 1 199 GLU 199 276 276 GLU GLU A . n A 1 200 GLN 200 277 277 GLN GLN A . n A 1 201 ARG 201 278 278 ARG ARG A . n A 1 202 LEU 202 279 279 LEU LEU A . n A 1 203 SER 203 280 280 SER SER A . n A 1 204 LEU 204 281 281 LEU LEU A . n A 1 205 PHE 205 282 282 PHE PHE A . n A 1 206 LYS 206 283 283 LYS LYS A . n A 1 207 TYR 207 284 284 TYR TYR A . n A 1 208 TYR 208 285 285 TYR TYR A . n A 1 209 THR 209 286 286 THR THR A . n A 1 210 SER 210 287 287 SER SER A . n A 1 211 LYS 211 288 288 LYS LYS A . n A 1 212 ILE 212 289 289 ILE ILE A . n A 1 213 LYS 213 290 290 LYS LYS A . n A 1 214 LEU 214 291 291 LEU LEU A . n A 1 215 ASP 215 292 292 ASP ASP A . n A 1 216 THR 216 293 293 THR THR A . n A 1 217 GLU 217 294 294 GLU GLU A . n A 1 218 VAL 218 295 295 VAL VAL A . n A 1 219 SER 219 296 296 SER SER A . n A 1 220 LEU 220 297 297 LEU LEU A . n A 1 221 GLU 221 298 298 GLU GLU A . n A 1 222 GLU 222 299 299 GLU GLU A . n A 1 223 LEU 223 300 300 LEU LEU A . n A 1 224 ALA 224 301 301 ALA ALA A . n A 1 225 LYS 225 302 302 LYS LYS A . n A 1 226 LEU 226 303 303 LEU LEU A . n A 1 227 THR 227 304 304 THR THR A . n A 1 228 GLU 228 305 305 GLU GLU A . n A 1 229 GLY 229 306 306 GLY GLY A . n A 1 230 TYR 230 307 307 TYR TYR A . n A 1 231 THR 231 308 308 THR THR A . n A 1 232 ALA 232 309 309 ALA ALA A . n A 1 233 SER 233 310 310 SER SER A . n A 1 234 ASP 234 311 311 ASP ASP A . n A 1 235 ILE 235 312 312 ILE ILE A . n A 1 236 ARG 236 313 313 ARG ARG A . n A 1 237 ASP 237 314 314 ASP ASP A . n A 1 238 ILE 238 315 315 ILE ILE A . n A 1 239 VAL 239 316 316 VAL VAL A . n A 1 240 GLN 240 317 317 GLN GLN A . n A 1 241 ALA 241 318 318 ALA ALA A . n A 1 242 ALA 242 319 319 ALA ALA A . n A 1 243 HIS 243 320 320 HIS HIS A . n A 1 244 ILE 244 321 321 ILE ILE A . n A 1 245 LYS 245 322 322 LYS LYS A . n A 1 246 VAL 246 323 323 VAL VAL A . n A 1 247 VAL 247 324 324 VAL VAL A . n A 1 248 LYS 248 325 325 LYS LYS A . n A 1 249 GLU 249 326 326 GLU GLU A . n A 1 250 MET 250 327 327 MET MET A . n A 1 251 PHE 251 328 328 PHE PHE A . n A 1 252 LYS 252 329 329 LYS LYS A . n A 1 253 ASN 253 330 330 ASN ASN A . n A 1 254 ASN 254 331 331 ASN ASN A . n A 1 255 LEU 255 332 332 LEU LEU A . n A 1 256 GLY 256 333 333 GLY GLY A . n A 1 257 GLU 257 334 334 GLU GLU A . n A 1 258 PRO 258 335 335 PRO PRO A . n A 1 259 ARG 259 336 336 ARG ARG A . n A 1 260 THR 260 337 337 THR THR A . n A 1 261 ILE 261 338 338 ILE ILE A . n A 1 262 THR 262 339 339 THR THR A . n A 1 263 LEU 263 340 340 LEU LEU A . n A 1 264 GLN 264 341 341 GLN GLN A . n A 1 265 ASP 265 342 342 ASP ASP A . n A 1 266 PHE 266 343 343 PHE PHE A . n A 1 267 LYS 267 344 344 LYS LYS A . n A 1 268 ASP 268 345 345 ASP ASP A . n A 1 269 ILE 269 346 346 ILE ILE A . n A 1 270 LEU 270 347 347 LEU LEU A . n A 1 271 LYS 271 348 348 LYS LYS A . n A 1 272 VAL 272 349 349 VAL VAL A . n A 1 273 ARG 273 350 350 ARG ARG A . n A 1 274 MET 274 351 351 MET MET A . n A 1 275 PRO 275 352 352 PRO PRO A . n A 1 276 SER 276 353 353 SER SER A . n A 1 277 VAL 277 354 354 VAL VAL A . n A 1 278 ASN 278 355 355 ASN ASN A . n A 1 279 PRO 279 356 356 PRO PRO A . n A 1 280 GLU 280 357 357 GLU GLU A . n A 1 281 LEU 281 358 358 LEU LEU A . n A 1 282 ILE 282 359 359 ILE ILE A . n A 1 283 LYS 283 360 360 LYS LYS A . n A 1 284 ALA 284 361 361 ALA ALA A . n A 1 285 TYR 285 362 362 TYR TYR A . n A 1 286 GLU 286 363 363 GLU GLU A . n A 1 287 ALA 287 364 364 ALA ALA A . n A 1 288 TRP 288 365 365 TRP TRP A . n A 1 289 THR 289 366 366 THR THR A . n A 1 290 GLU 290 367 367 GLU GLU A . n A 1 291 LYS 291 368 368 LYS LYS A . n A 1 292 PHE 292 369 369 PHE PHE A . n A 1 293 LYS 293 370 ? ? ? A . n A 1 294 ALA 294 371 ? ? ? A . n A 1 295 LEU 295 372 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL 1 401 1 CL CL A . C 3 HOH 1 501 1 HOH HOH A . C 3 HOH 2 502 2 HOH HOH A . C 3 HOH 3 503 3 HOH HOH A . C 3 HOH 4 504 4 HOH HOH A . C 3 HOH 5 505 6 HOH HOH A . C 3 HOH 6 506 7 HOH HOH A . C 3 HOH 7 507 8 HOH HOH A . C 3 HOH 8 508 9 HOH HOH A . C 3 HOH 9 509 10 HOH HOH A . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 SOLVE 2.13 2-Jul-2007 program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 4 PHENIX 1.8.2_1309 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 5 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 ADSC Quantum ? ? ? ? 'data collection' ? ? ? # _cell.entry_id 4LGM _cell.length_a 101.321 _cell.length_b 101.321 _cell.length_c 64.743 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4LGM _symmetry.space_group_name_H-M 'P 64' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4LGM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.86 _exptl_crystal.density_percent_sol 56.96 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '70 % MPD, 100 mM HEPES pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 293.0K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2011-03-20 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97945 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL7-1' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL7-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97945 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4LGM _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 30.000 _reflns.d_resolution_high 2.7110 _reflns.number_obs 19379 _reflns.number_all 19379 _reflns.percent_possible_obs 99.700 _reflns.pdbx_Rmerge_I_obs 0.073 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 26.500 _reflns.B_iso_Wilson_estimate 85.65 _reflns.pdbx_redundancy 5.900 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared 1 1 2.7110 2.830 99.900 0.657 ? ? 5.500 ? ? ? ? ? ? 1 2 2.830 2.940 100.000 0.490 ? ? 5.900 ? ? ? ? ? ? 1 3 2.940 3.070 99.900 0.282 ? ? 5.900 ? ? ? ? ? ? 1 4 3.070 3.240 100.000 0.191 ? ? 5.900 ? ? ? ? ? ? 1 5 3.240 3.440 100.000 0.136 ? ? 5.900 ? ? ? ? ? ? 1 6 3.440 3.700 100.000 0.104 ? ? 6.000 ? ? ? ? ? ? 1 7 3.700 4.080 100.000 0.086 ? ? 5.900 ? ? ? ? ? ? 1 8 4.080 4.660 100.000 0.076 ? ? 5.900 ? ? ? ? ? ? 1 9 4.660 5.870 100.000 0.066 ? ? 5.900 ? ? ? ? ? ? 1 10 5.870 30.000 97.000 0.049 ? ? 5.700 ? ? ? ? ? ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4LGM _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 19379 _refine.ls_number_reflns_all 20033 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 23.166 _refine.ls_d_res_high 2.7110 _refine.ls_percent_reflns_obs 99.41 _refine.ls_R_factor_obs 0.2208 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2171 _refine.ls_R_factor_R_free 0.2551 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.85 _refine.ls_number_reflns_R_free 1973 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 1.000 _refine.occupancy_max 1.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 94.8882 _refine.aniso_B[1][1] -3.7374 _refine.aniso_B[2][2] -3.7374 _refine.aniso_B[3][3] 15.0566 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.42 _refine.pdbx_overall_phase_error 27.49 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2021 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 9 _refine_hist.number_atoms_total 2031 _refine_hist.d_res_high 2.7110 _refine_hist.d_res_low 23.166 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.007 ? ? 2058 'X-RAY DIFFRACTION' ? f_angle_d 1.003 ? ? 2773 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 14.271 ? ? 791 'X-RAY DIFFRACTION' ? f_chiral_restr 0.071 ? ? 312 'X-RAY DIFFRACTION' ? f_plane_restr 0.006 ? ? 351 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.7110 2.7786 1217 0.3109 95.00 0.3318 . . 136 . . . . 'X-RAY DIFFRACTION' . 2.7786 2.8536 1319 0.2868 100.00 0.3502 . . 130 . . . . 'X-RAY DIFFRACTION' . 2.8536 2.9374 1301 0.2980 100.00 0.3994 . . 152 . . . . 'X-RAY DIFFRACTION' . 2.9374 3.0320 1282 0.2588 100.00 0.3155 . . 145 . . . . 'X-RAY DIFFRACTION' . 3.0320 3.1401 1275 0.2504 100.00 0.3367 . . 140 . . . . 'X-RAY DIFFRACTION' . 3.1401 3.2655 1354 0.2497 100.00 0.2635 . . 124 . . . . 'X-RAY DIFFRACTION' . 3.2655 3.4137 1276 0.2489 100.00 0.3291 . . 150 . . . . 'X-RAY DIFFRACTION' . 3.4137 3.5930 1319 0.2435 100.00 0.2649 . . 120 . . . . 'X-RAY DIFFRACTION' . 3.5930 3.8172 1289 0.2143 100.00 0.2500 . . 150 . . . . 'X-RAY DIFFRACTION' . 3.8172 4.1105 1296 0.2026 100.00 0.2904 . . 140 . . . . 'X-RAY DIFFRACTION' . 4.1105 4.5213 1291 0.1969 100.00 0.2124 . . 146 . . . . 'X-RAY DIFFRACTION' . 4.5213 5.1692 1289 0.1934 100.00 0.1739 . . 156 . . . . 'X-RAY DIFFRACTION' . 5.1692 6.4889 1292 0.2343 100.00 0.2942 . . 144 . . . . 'X-RAY DIFFRACTION' . 6.4889 23.1664 1260 0.1920 97.00 0.2418 . . 140 . . . . # _struct.entry_id 4LGM _struct.title 'Crystal Structure of Sulfolobus solfataricus Vps4' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4LGM _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'ATP hydrolysis, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q97ZJ7_SULSO _struct_ref.pdbx_db_accession Q97ZJ7 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;NTSPPEEVVITEKPKVSFKDIVGLDDVKEALREAIIYPTKRPDLFPLGWPRGILLYGPPGCGKTMIAAAVANEIDSIFMQ LDAASVMSKWLGEAEKNVANVFKMAREESKKQNKPAIIFIDELDALLGVYSTEVGGEARVRNQFLKEMDGLLDKSENYKV YVIGATNKPWRLDEAFLRRFQKRIYVPLPDYEQRLSLFKYYTSKIKLDTEVSLEELAKLTEGYTASDIRDIVQAAHIKVV KEMFKNNLGEPRTITLQDFKDILKVRMPSVNPELIKAYEAWTEKFKAL ; _struct_ref.pdbx_align_begin 85 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4LGM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 295 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q97ZJ7 _struct_ref_seq.db_align_beg 85 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 372 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 85 _struct_ref_seq.pdbx_auth_seq_align_end 372 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4LGM GLY A 1 ? UNP Q97ZJ7 ? ? 'expression tag' -6 1 1 4LGM PRO A 2 ? UNP Q97ZJ7 ? ? 'expression tag' -5 2 1 4LGM ILE A 3 ? UNP Q97ZJ7 ? ? 'expression tag' -4 3 1 4LGM ASP A 4 ? UNP Q97ZJ7 ? ? 'expression tag' -3 4 1 4LGM PRO A 5 ? UNP Q97ZJ7 ? ? 'expression tag' -2 5 1 4LGM PHE A 6 ? UNP Q97ZJ7 ? ? 'expression tag' -1 6 1 4LGM THR A 7 ? UNP Q97ZJ7 ? ? 'expression tag' 0 7 1 4LGM GLN A 129 ? UNP Q97ZJ7 GLU 206 'engineered mutation' 206 8 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details 'The functional unit is proposed to be hexamer. But it is monomeric in crystal' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 31 ? ILE A 42 ? LEU A 108 ILE A 119 1 ? 12 HELX_P HELX_P2 2 ILE A 42 ? ARG A 48 ? ILE A 119 ARG A 125 1 ? 7 HELX_P HELX_P3 3 PRO A 49 ? PHE A 52 ? PRO A 126 PHE A 129 5 ? 4 HELX_P HELX_P4 4 GLY A 69 ? ILE A 81 ? GLY A 146 ILE A 158 1 ? 13 HELX_P HELX_P5 5 ALA A 101 ? ASN A 120 ? ALA A 178 ASN A 197 1 ? 20 HELX_P HELX_P6 6 LEU A 130 ? LEU A 134 ? LEU A 207 LEU A 211 5 ? 5 HELX_P HELX_P7 7 ARG A 146 ? GLY A 157 ? ARG A 223 GLY A 234 1 ? 12 HELX_P HELX_P8 8 ASP A 180 ? ARG A 185 ? ASP A 257 ARG A 262 1 ? 6 HELX_P HELX_P9 9 ASP A 197 ? THR A 209 ? ASP A 274 THR A 286 1 ? 13 HELX_P HELX_P10 10 SER A 219 ? THR A 227 ? SER A 296 THR A 304 1 ? 9 HELX_P HELX_P11 11 THR A 231 ? ASN A 253 ? THR A 308 ASN A 330 1 ? 23 HELX_P HELX_P12 12 THR A 262 ? ARG A 273 ? THR A 339 ARG A 350 1 ? 12 HELX_P HELX_P13 13 ASN A 278 ? PHE A 292 ? ASN A 355 PHE A 369 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 84 ? ASP A 89 ? ILE A 161 ASP A 166 A 2 ALA A 123 ? ASP A 128 ? ALA A 200 ASP A 205 A 3 TYR A 168 ? THR A 173 ? TYR A 245 THR A 250 A 4 GLY A 59 ? TYR A 63 ? GLY A 136 TYR A 140 A 5 LYS A 189 ? TYR A 192 ? LYS A 266 TYR A 269 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 88 ? N LEU A 165 O ASP A 128 ? O ASP A 205 A 2 3 N ALA A 123 ? N ALA A 200 O TYR A 168 ? O TYR A 245 A 3 4 O GLY A 171 ? O GLY A 248 N LEU A 62 ? N LEU A 139 A 4 5 N LEU A 61 ? N LEU A 138 O ILE A 191 ? O ILE A 268 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id CL _struct_site.pdbx_auth_seq_id 401 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE CL A 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 PRO A 65 ? PRO A 142 . ? 1_555 ? 2 AC1 4 CYS A 68 ? CYS A 145 . ? 1_555 ? 3 AC1 4 GLY A 69 ? GLY A 146 . ? 1_555 ? 4 AC1 4 LYS A 70 ? LYS A 147 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A VAL 295 ? ? O A HOH 505 ? ? 2.08 2 1 OE2 A GLU 276 ? ? O A HOH 508 ? ? 2.17 3 1 O A LYS 290 ? ? O A HOH 502 ? ? 2.19 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 OE1 A GLU 157 ? ? 1_555 CG2 A THR 293 ? ? 4_675 1.91 2 1 OE1 A GLU 117 ? ? 1_555 NZ A LYS 325 ? ? 6_654 2.15 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 178 ? ? -66.21 1.70 2 1 ASN A 331 ? ? 37.85 67.01 # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 2.730 _diffrn_reflns.pdbx_d_res_low 30.000 _diffrn_reflns.pdbx_number_obs 19379 _diffrn_reflns.pdbx_Rmerge_I_obs 0.073 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.03 _diffrn_reflns.av_sigmaI_over_netI 14.06 _diffrn_reflns.pdbx_redundancy 5.90 _diffrn_reflns.pdbx_percent_possible_obs 99.70 _diffrn_reflns.number 113696 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 5.87 30.00 ? ? 0.049 ? 0.977 5.70 97.00 1 4.66 5.87 ? ? 0.066 ? 0.982 5.90 100.00 1 4.08 4.66 ? ? 0.076 ? 0.983 5.90 100.00 1 3.70 4.08 ? ? 0.086 ? 1.026 5.90 100.00 1 3.44 3.70 ? ? 0.104 ? 0.974 6.00 100.00 1 3.24 3.44 ? ? 0.136 ? 1.025 5.90 100.00 1 3.07 3.24 ? ? 0.191 ? 1.087 5.90 100.00 1 2.94 3.07 ? ? 0.282 ? 1.079 5.90 99.90 1 2.83 2.94 ? ? 0.490 ? 1.078 5.90 100.00 1 2.73 2.83 ? ? 0.657 ? 1.084 5.50 99.90 # _phasing.method SAD # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -6 ? A GLY 1 2 1 Y 1 A PRO -5 ? A PRO 2 3 1 Y 1 A ILE -4 ? A ILE 3 4 1 Y 1 A ASP -3 ? A ASP 4 5 1 Y 1 A PRO -2 ? A PRO 5 6 1 Y 1 A PHE -1 ? A PHE 6 7 1 Y 1 A THR 0 ? A THR 7 8 1 Y 1 A ASN 85 ? A ASN 8 9 1 Y 1 A THR 86 ? A THR 9 10 1 Y 1 A SER 87 ? A SER 10 11 1 Y 1 A PRO 88 ? A PRO 11 12 1 Y 1 A PRO 89 ? A PRO 12 13 1 Y 1 A GLU 90 ? A GLU 13 14 1 Y 1 A GLU 91 ? A GLU 14 15 1 Y 1 A VAL 92 ? A VAL 15 16 1 Y 1 A VAL 93 ? A VAL 16 17 1 Y 1 A ILE 94 ? A ILE 17 18 1 Y 1 A THR 95 ? A THR 18 19 1 Y 1 A GLU 96 ? A GLU 19 20 1 Y 1 A LYS 97 ? A LYS 20 21 1 Y 1 A PRO 98 ? A PRO 21 22 1 Y 1 A LYS 173 ? A LYS 96 23 1 Y 1 A TRP 174 ? A TRP 97 24 1 Y 1 A LEU 175 ? A LEU 98 25 1 Y 1 A GLY 212 ? A GLY 135 26 1 Y 1 A VAL 213 ? A VAL 136 27 1 Y 1 A TYR 214 ? A TYR 137 28 1 Y 1 A SER 215 ? A SER 138 29 1 Y 1 A THR 216 ? A THR 139 30 1 Y 1 A GLU 217 ? A GLU 140 31 1 Y 1 A VAL 218 ? A VAL 141 32 1 Y 1 A GLY 219 ? A GLY 142 33 1 Y 1 A GLY 220 ? A GLY 143 34 1 Y 1 A GLU 221 ? A GLU 144 35 1 Y 1 A ASP 237 ? A ASP 160 36 1 Y 1 A LYS 238 ? A LYS 161 37 1 Y 1 A SER 239 ? A SER 162 38 1 Y 1 A GLU 240 ? A GLU 163 39 1 Y 1 A ASN 241 ? A ASN 164 40 1 Y 1 A TYR 242 ? A TYR 165 41 1 Y 1 A LYS 243 ? A LYS 166 42 1 Y 1 A LYS 370 ? A LYS 293 43 1 Y 1 A ALA 371 ? A ALA 294 44 1 Y 1 A LEU 372 ? A LEU 295 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 ILE N N N N 162 ILE CA C N S 163 ILE C C N N 164 ILE O O N N 165 ILE CB C N S 166 ILE CG1 C N N 167 ILE CG2 C N N 168 ILE CD1 C N N 169 ILE OXT O N N 170 ILE H H N N 171 ILE H2 H N N 172 ILE HA H N N 173 ILE HB H N N 174 ILE HG12 H N N 175 ILE HG13 H N N 176 ILE HG21 H N N 177 ILE HG22 H N N 178 ILE HG23 H N N 179 ILE HD11 H N N 180 ILE HD12 H N N 181 ILE HD13 H N N 182 ILE HXT H N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 MET N N N N 231 MET CA C N S 232 MET C C N N 233 MET O O N N 234 MET CB C N N 235 MET CG C N N 236 MET SD S N N 237 MET CE C N N 238 MET OXT O N N 239 MET H H N N 240 MET H2 H N N 241 MET HA H N N 242 MET HB2 H N N 243 MET HB3 H N N 244 MET HG2 H N N 245 MET HG3 H N N 246 MET HE1 H N N 247 MET HE2 H N N 248 MET HE3 H N N 249 MET HXT H N N 250 PHE N N N N 251 PHE CA C N S 252 PHE C C N N 253 PHE O O N N 254 PHE CB C N N 255 PHE CG C Y N 256 PHE CD1 C Y N 257 PHE CD2 C Y N 258 PHE CE1 C Y N 259 PHE CE2 C Y N 260 PHE CZ C Y N 261 PHE OXT O N N 262 PHE H H N N 263 PHE H2 H N N 264 PHE HA H N N 265 PHE HB2 H N N 266 PHE HB3 H N N 267 PHE HD1 H N N 268 PHE HD2 H N N 269 PHE HE1 H N N 270 PHE HE2 H N N 271 PHE HZ H N N 272 PHE HXT H N N 273 PRO N N N N 274 PRO CA C N S 275 PRO C C N N 276 PRO O O N N 277 PRO CB C N N 278 PRO CG C N N 279 PRO CD C N N 280 PRO OXT O N N 281 PRO H H N N 282 PRO HA H N N 283 PRO HB2 H N N 284 PRO HB3 H N N 285 PRO HG2 H N N 286 PRO HG3 H N N 287 PRO HD2 H N N 288 PRO HD3 H N N 289 PRO HXT H N N 290 SER N N N N 291 SER CA C N S 292 SER C C N N 293 SER O O N N 294 SER CB C N N 295 SER OG O N N 296 SER OXT O N N 297 SER H H N N 298 SER H2 H N N 299 SER HA H N N 300 SER HB2 H N N 301 SER HB3 H N N 302 SER HG H N N 303 SER HXT H N N 304 THR N N N N 305 THR CA C N S 306 THR C C N N 307 THR O O N N 308 THR CB C N R 309 THR OG1 O N N 310 THR CG2 C N N 311 THR OXT O N N 312 THR H H N N 313 THR H2 H N N 314 THR HA H N N 315 THR HB H N N 316 THR HG1 H N N 317 THR HG21 H N N 318 THR HG22 H N N 319 THR HG23 H N N 320 THR HXT H N N 321 TRP N N N N 322 TRP CA C N S 323 TRP C C N N 324 TRP O O N N 325 TRP CB C N N 326 TRP CG C Y N 327 TRP CD1 C Y N 328 TRP CD2 C Y N 329 TRP NE1 N Y N 330 TRP CE2 C Y N 331 TRP CE3 C Y N 332 TRP CZ2 C Y N 333 TRP CZ3 C Y N 334 TRP CH2 C Y N 335 TRP OXT O N N 336 TRP H H N N 337 TRP H2 H N N 338 TRP HA H N N 339 TRP HB2 H N N 340 TRP HB3 H N N 341 TRP HD1 H N N 342 TRP HE1 H N N 343 TRP HE3 H N N 344 TRP HZ2 H N N 345 TRP HZ3 H N N 346 TRP HH2 H N N 347 TRP HXT H N N 348 TYR N N N N 349 TYR CA C N S 350 TYR C C N N 351 TYR O O N N 352 TYR CB C N N 353 TYR CG C Y N 354 TYR CD1 C Y N 355 TYR CD2 C Y N 356 TYR CE1 C Y N 357 TYR CE2 C Y N 358 TYR CZ C Y N 359 TYR OH O N N 360 TYR OXT O N N 361 TYR H H N N 362 TYR H2 H N N 363 TYR HA H N N 364 TYR HB2 H N N 365 TYR HB3 H N N 366 TYR HD1 H N N 367 TYR HD2 H N N 368 TYR HE1 H N N 369 TYR HE2 H N N 370 TYR HH H N N 371 TYR HXT H N N 372 VAL N N N N 373 VAL CA C N S 374 VAL C C N N 375 VAL O O N N 376 VAL CB C N N 377 VAL CG1 C N N 378 VAL CG2 C N N 379 VAL OXT O N N 380 VAL H H N N 381 VAL H2 H N N 382 VAL HA H N N 383 VAL HB H N N 384 VAL HG11 H N N 385 VAL HG12 H N N 386 VAL HG13 H N N 387 VAL HG21 H N N 388 VAL HG22 H N N 389 VAL HG23 H N N 390 VAL HXT H N N 391 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _atom_sites.entry_id 4LGM _atom_sites.fract_transf_matrix[1][1] 0.009870 _atom_sites.fract_transf_matrix[1][2] 0.005698 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011396 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015446 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S # loop_