HEADER LYASE 28-JUN-13 4LGQ TITLE CRYSTAL STRUCTURE OF A PUTATIVE POLYKETIDE CYCLASE (CV_0247) FROM TITLE 2 CHROMOBACTERIUM VIOLACEUM ATCC 12472 AT 2.72 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE POLYKETIDE CYCLASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHROMOBACTERIUM VIOLACEUM; SOURCE 3 ORGANISM_TAXID: 243365; SOURCE 4 STRAIN: ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 SOURCE 5 / NCTC 9757; SOURCE 6 GENE: CV_0247; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS SNOAL-LIKE, PF07366 FAMILY PROTEIN, STRUCTURAL GENOMICS, JOINT CENTER KEYWDS 2 FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI- KEYWDS 3 BIOLOGY, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 3 01-FEB-23 4LGQ 1 REMARK SEQADV LINK REVDAT 2 15-NOV-17 4LGQ 1 REMARK REVDAT 1 24-JUL-13 4LGQ 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE POLYKETIDE CYCLASE (CV_0247) JRNL TITL 2 FROM CHROMOBACTERIUM VIOLACEUM ATCC 12472 AT 2.72 A JRNL TITL 3 RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.72 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.72 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.04 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 18371 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.170 REMARK 3 FREE R VALUE TEST SET COUNT : 949 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 9 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.72 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.88 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.98 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2978 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2343 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2809 REMARK 3 BIN R VALUE (WORKING SET) : 0.2305 REMARK 3 BIN FREE R VALUE : 0.2938 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.67 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 169 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4088 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 60 REMARK 3 SOLVENT ATOMS : 89 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 77.78 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 68.96 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.19020 REMARK 3 B22 (A**2) : 4.77500 REMARK 3 B33 (A**2) : -4.58470 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.386 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.919 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4245 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5728 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1926 ; 6.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 96 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 635 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4245 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 553 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4697 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.13 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.48 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.38 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|5 - 138} REMARK 3 ORIGIN FOR THE GROUP (A): 53.7408 8.3857 127.9830 REMARK 3 T TENSOR REMARK 3 T11: -0.1829 T22: -0.0858 REMARK 3 T33: 0.0046 T12: 0.0079 REMARK 3 T13: -0.1520 T23: -0.0108 REMARK 3 L TENSOR REMARK 3 L11: 2.8218 L22: 1.7592 REMARK 3 L33: 4.6901 L12: 0.3034 REMARK 3 L13: 1.0529 L23: 0.0368 REMARK 3 S TENSOR REMARK 3 S11: 0.0814 S12: -0.2313 S13: -0.0859 REMARK 3 S21: 0.5442 S22: 0.1752 S23: -0.5442 REMARK 3 S31: -0.0139 S32: 0.5442 S33: -0.2566 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {B|5 - 138} REMARK 3 ORIGIN FOR THE GROUP (A): 37.8205 6.9386 110.4470 REMARK 3 T TENSOR REMARK 3 T11: -0.0756 T22: -0.0137 REMARK 3 T33: -0.0995 T12: -0.0095 REMARK 3 T13: -0.0317 T23: 0.0229 REMARK 3 L TENSOR REMARK 3 L11: 1.6935 L22: 4.7693 REMARK 3 L33: 2.2635 L12: 0.5906 REMARK 3 L13: -0.4177 L23: -0.1896 REMARK 3 S TENSOR REMARK 3 S11: -0.0628 S12: 0.0493 S13: -0.1220 REMARK 3 S21: -0.3049 S22: 0.1189 S23: -0.1203 REMARK 3 S31: 0.2988 S32: -0.2222 S33: -0.0561 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: {C|5 - 138} REMARK 3 ORIGIN FOR THE GROUP (A): 68.8682 2.3812 87.1786 REMARK 3 T TENSOR REMARK 3 T11: 0.0042 T22: -0.1393 REMARK 3 T33: -0.1046 T12: 0.1326 REMARK 3 T13: 0.0291 T23: -0.0508 REMARK 3 L TENSOR REMARK 3 L11: 2.7171 L22: 3.4304 REMARK 3 L33: 3.7984 L12: 1.3827 REMARK 3 L13: -1.0614 L23: 0.8413 REMARK 3 S TENSOR REMARK 3 S11: -0.1872 S12: -0.2471 S13: -0.3792 REMARK 3 S21: 0.3902 S22: 0.2135 S23: -0.5442 REMARK 3 S31: 0.5440 S32: 0.5442 S33: -0.0263 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: {D|5 - 138} REMARK 3 ORIGIN FOR THE GROUP (A): 53.7706 20.2103 87.3630 REMARK 3 T TENSOR REMARK 3 T11: -0.0312 T22: -0.0983 REMARK 3 T33: -0.0618 T12: 0.0096 REMARK 3 T13: -0.0345 T23: -0.0225 REMARK 3 L TENSOR REMARK 3 L11: 1.6454 L22: 2.6737 REMARK 3 L33: 3.7306 L12: -0.1906 REMARK 3 L13: -0.6374 L23: 0.8278 REMARK 3 S TENSOR REMARK 3 S11: 0.0561 S12: 0.1229 S13: -0.1190 REMARK 3 S21: -0.4715 S22: -0.0096 S23: 0.2872 REMARK 3 S31: -0.2435 S32: -0.1251 S33: -0.0465 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. A MET-INHIBITION PROTOCOL WAS USED REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. 3.NCS RESTRAINTS WERE IMPOSED BY AUTOBUSTER'S LSSR REMARK 3 PROCEDURE (-AUTONCS). 4.EDO, PEG FRAGMENTS (PGE AND PEG) AND CL REMARK 3 IONS MODELED WERE PRESENT IN PROTEIN/CYRO CONDITIONS. 5. THE MAD REMARK 3 PHASES WERE USED AS RESTRAINTS DURING REFINEMENT. REMARK 4 REMARK 4 4LGQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1000080608. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 10.77 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837,0.97872,0.97818 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING); REMARK 200 SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE JULY 4, 2012 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18389 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.720 REMARK 200 RESOLUTION RANGE LOW (A) : 49.038 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.2800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.72 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.82 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.73900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.300M SODIUM CHLORIDE, 22.00% REMARK 280 POLYETHYLENE GLYCOL 8000, 0.1M CAPS PH 10.77, NANODROP, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.05000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.47900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.03800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.47900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.05000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.03800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MSE A 1 REMARK 465 GLY A 2 REMARK 465 ASP A 3 REMARK 465 VAL A 4 REMARK 465 ALA A 139 REMARK 465 GLY B 0 REMARK 465 MSE B 1 REMARK 465 GLY B 2 REMARK 465 ASP B 3 REMARK 465 VAL B 4 REMARK 465 ALA B 139 REMARK 465 GLY C 0 REMARK 465 MSE C 1 REMARK 465 GLY C 2 REMARK 465 ASP C 3 REMARK 465 VAL C 4 REMARK 465 ALA C 139 REMARK 465 GLY D 0 REMARK 465 MSE D 1 REMARK 465 GLY D 2 REMARK 465 ASP D 3 REMARK 465 VAL D 4 REMARK 465 ALA D 139 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 100 125.15 -39.11 REMARK 500 ALA B 100 124.76 -39.70 REMARK 500 ALA D 100 125.54 -39.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG C 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO C 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG D 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO D 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-402589 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 4LGQ A 1 139 UNP Q7P1G6 Q7P1G6_CHRVO 1 139 DBREF 4LGQ B 1 139 UNP Q7P1G6 Q7P1G6_CHRVO 1 139 DBREF 4LGQ C 1 139 UNP Q7P1G6 Q7P1G6_CHRVO 1 139 DBREF 4LGQ D 1 139 UNP Q7P1G6 Q7P1G6_CHRVO 1 139 SEQADV 4LGQ GLY A 0 UNP Q7P1G6 EXPRESSION TAG SEQADV 4LGQ GLY B 0 UNP Q7P1G6 EXPRESSION TAG SEQADV 4LGQ GLY C 0 UNP Q7P1G6 EXPRESSION TAG SEQADV 4LGQ GLY D 0 UNP Q7P1G6 EXPRESSION TAG SEQRES 1 A 140 GLY MSE GLY ASP VAL MSE ASP THR SER LYS ALA VAL ILE SEQRES 2 A 140 GLN ARG PHE ASN ARG GLU VAL ILE GLU ASN GLY ASP MSE SEQRES 3 A 140 ALA ALA PHE ALA GLU LEU VAL ALA PRO ASP PHE VAL ASN SEQRES 4 A 140 HIS SER ALA PRO PRO GLY VAL SER PRO GLY PRO ASP GLY SEQRES 5 A 140 PHE ALA GLY PHE PHE THR GLY MSE LEU HIS PRO ALA LEU SEQRES 6 A 140 SER ASP ILE ARG VAL HIS ILE HIS GLU GLN ILE GLU GLU SEQRES 7 A 140 ASN GLY LYS VAL VAL THR ARG LYS THR ILE GLU ALA THR SEQRES 8 A 140 HIS THR GLY ALA PHE PHE GLY GLN PRO ALA SER GLY LYS SEQRES 9 A 140 ARG ILE ALA ILE HIS ALA MSE ASP ILE VAL VAL VAL ARG SEQRES 10 A 140 ASP GLY LYS TYR ALA GLU HIS TRP SER CYS ALA ASP LEU SEQRES 11 A 140 TYR GLY ALA LEU ALA GLN ILE ARG ALA ALA SEQRES 1 B 140 GLY MSE GLY ASP VAL MSE ASP THR SER LYS ALA VAL ILE SEQRES 2 B 140 GLN ARG PHE ASN ARG GLU VAL ILE GLU ASN GLY ASP MSE SEQRES 3 B 140 ALA ALA PHE ALA GLU LEU VAL ALA PRO ASP PHE VAL ASN SEQRES 4 B 140 HIS SER ALA PRO PRO GLY VAL SER PRO GLY PRO ASP GLY SEQRES 5 B 140 PHE ALA GLY PHE PHE THR GLY MSE LEU HIS PRO ALA LEU SEQRES 6 B 140 SER ASP ILE ARG VAL HIS ILE HIS GLU GLN ILE GLU GLU SEQRES 7 B 140 ASN GLY LYS VAL VAL THR ARG LYS THR ILE GLU ALA THR SEQRES 8 B 140 HIS THR GLY ALA PHE PHE GLY GLN PRO ALA SER GLY LYS SEQRES 9 B 140 ARG ILE ALA ILE HIS ALA MSE ASP ILE VAL VAL VAL ARG SEQRES 10 B 140 ASP GLY LYS TYR ALA GLU HIS TRP SER CYS ALA ASP LEU SEQRES 11 B 140 TYR GLY ALA LEU ALA GLN ILE ARG ALA ALA SEQRES 1 C 140 GLY MSE GLY ASP VAL MSE ASP THR SER LYS ALA VAL ILE SEQRES 2 C 140 GLN ARG PHE ASN ARG GLU VAL ILE GLU ASN GLY ASP MSE SEQRES 3 C 140 ALA ALA PHE ALA GLU LEU VAL ALA PRO ASP PHE VAL ASN SEQRES 4 C 140 HIS SER ALA PRO PRO GLY VAL SER PRO GLY PRO ASP GLY SEQRES 5 C 140 PHE ALA GLY PHE PHE THR GLY MSE LEU HIS PRO ALA LEU SEQRES 6 C 140 SER ASP ILE ARG VAL HIS ILE HIS GLU GLN ILE GLU GLU SEQRES 7 C 140 ASN GLY LYS VAL VAL THR ARG LYS THR ILE GLU ALA THR SEQRES 8 C 140 HIS THR GLY ALA PHE PHE GLY GLN PRO ALA SER GLY LYS SEQRES 9 C 140 ARG ILE ALA ILE HIS ALA MSE ASP ILE VAL VAL VAL ARG SEQRES 10 C 140 ASP GLY LYS TYR ALA GLU HIS TRP SER CYS ALA ASP LEU SEQRES 11 C 140 TYR GLY ALA LEU ALA GLN ILE ARG ALA ALA SEQRES 1 D 140 GLY MSE GLY ASP VAL MSE ASP THR SER LYS ALA VAL ILE SEQRES 2 D 140 GLN ARG PHE ASN ARG GLU VAL ILE GLU ASN GLY ASP MSE SEQRES 3 D 140 ALA ALA PHE ALA GLU LEU VAL ALA PRO ASP PHE VAL ASN SEQRES 4 D 140 HIS SER ALA PRO PRO GLY VAL SER PRO GLY PRO ASP GLY SEQRES 5 D 140 PHE ALA GLY PHE PHE THR GLY MSE LEU HIS PRO ALA LEU SEQRES 6 D 140 SER ASP ILE ARG VAL HIS ILE HIS GLU GLN ILE GLU GLU SEQRES 7 D 140 ASN GLY LYS VAL VAL THR ARG LYS THR ILE GLU ALA THR SEQRES 8 D 140 HIS THR GLY ALA PHE PHE GLY GLN PRO ALA SER GLY LYS SEQRES 9 D 140 ARG ILE ALA ILE HIS ALA MSE ASP ILE VAL VAL VAL ARG SEQRES 10 D 140 ASP GLY LYS TYR ALA GLU HIS TRP SER CYS ALA ASP LEU SEQRES 11 D 140 TYR GLY ALA LEU ALA GLN ILE ARG ALA ALA MODRES 4LGQ MSE A 5 MET SELENOMETHIONINE MODRES 4LGQ MSE A 25 MET SELENOMETHIONINE MODRES 4LGQ MSE A 59 MET SELENOMETHIONINE MODRES 4LGQ MSE A 110 MET SELENOMETHIONINE MODRES 4LGQ MSE B 5 MET SELENOMETHIONINE MODRES 4LGQ MSE B 25 MET SELENOMETHIONINE MODRES 4LGQ MSE B 59 MET SELENOMETHIONINE MODRES 4LGQ MSE B 110 MET SELENOMETHIONINE MODRES 4LGQ MSE C 5 MET SELENOMETHIONINE MODRES 4LGQ MSE C 25 MET SELENOMETHIONINE MODRES 4LGQ MSE C 59 MET SELENOMETHIONINE MODRES 4LGQ MSE C 110 MET SELENOMETHIONINE MODRES 4LGQ MSE D 5 MET SELENOMETHIONINE MODRES 4LGQ MSE D 25 MET SELENOMETHIONINE MODRES 4LGQ MSE D 59 MET SELENOMETHIONINE MODRES 4LGQ MSE D 110 MET SELENOMETHIONINE HET MSE A 5 8 HET MSE A 25 8 HET MSE A 59 8 HET MSE A 110 8 HET MSE B 5 8 HET MSE B 25 8 HET MSE B 59 8 HET MSE B 110 8 HET MSE C 5 8 HET MSE C 25 8 HET MSE C 59 8 HET MSE C 110 8 HET MSE D 5 8 HET MSE D 25 8 HET MSE D 59 8 HET MSE D 110 8 HET PEG A 201 7 HET EDO A 202 4 HET CL B 201 1 HET PG4 B 202 13 HET EDO B 203 4 HET CL C 201 1 HET PEG C 202 7 HET PEG C 203 7 HET EDO C 204 4 HET CL D 201 1 HET PEG D 202 7 HET EDO D 203 4 HETNAM MSE SELENOMETHIONINE HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETNAM PG4 TETRAETHYLENE GLYCOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 16(C5 H11 N O2 SE) FORMUL 5 PEG 4(C4 H10 O3) FORMUL 6 EDO 4(C2 H6 O2) FORMUL 7 CL 3(CL 1-) FORMUL 8 PG4 C8 H18 O5 FORMUL 17 HOH *89(H2 O) HELIX 1 1 THR A 7 VAL A 19 1 13 HELIX 2 2 ASP A 24 LEU A 31 1 8 HELIX 3 3 GLY A 48 MSE A 59 1 12 HELIX 4 4 MSE A 59 ALA A 63 1 5 HELIX 5 5 ASP A 128 ALA A 138 1 11 HELIX 6 6 THR B 7 VAL B 19 1 13 HELIX 7 7 ASP B 24 LEU B 31 1 8 HELIX 8 8 GLY B 48 MSE B 59 1 12 HELIX 9 9 MSE B 59 ALA B 63 1 5 HELIX 10 10 ASP B 128 ALA B 138 1 11 HELIX 11 11 THR C 7 VAL C 19 1 13 HELIX 12 12 ASP C 24 LEU C 31 1 8 HELIX 13 13 GLY C 48 MSE C 59 1 12 HELIX 14 14 MSE C 59 ALA C 63 1 5 HELIX 15 15 ASP C 128 ALA C 138 1 11 HELIX 16 16 THR D 7 VAL D 19 1 13 HELIX 17 17 ASP D 24 LEU D 31 1 8 HELIX 18 18 GLY D 48 MSE D 59 1 12 HELIX 19 19 MSE D 59 ALA D 63 1 5 HELIX 20 20 ASP D 128 ALA D 138 1 11 SHEET 1 A 5 VAL A 32 ASN A 38 0 SHEET 2 A 5 LYS A 119 ALA A 127 1 O TYR A 120 N ALA A 33 SHEET 3 A 5 ARG A 104 ARG A 116 -1 N VAL A 114 O ALA A 121 SHEET 4 A 5 LYS A 80 HIS A 91 -1 N ILE A 87 O ILE A 107 SHEET 5 A 5 LEU A 64 GLU A 77 -1 N ARG A 68 O GLU A 88 SHEET 1 B 5 VAL B 32 ASN B 38 0 SHEET 2 B 5 LYS B 119 ALA B 127 1 O TYR B 120 N ALA B 33 SHEET 3 B 5 ARG B 104 ARG B 116 -1 N VAL B 114 O ALA B 121 SHEET 4 B 5 LYS B 80 HIS B 91 -1 N ILE B 87 O ILE B 107 SHEET 5 B 5 LEU B 64 GLU B 77 -1 N ARG B 68 O GLU B 88 SHEET 1 C 5 VAL C 32 ASN C 38 0 SHEET 2 C 5 LYS C 119 ALA C 127 1 O TYR C 120 N ALA C 33 SHEET 3 C 5 ARG C 104 ARG C 116 -1 N VAL C 114 O ALA C 121 SHEET 4 C 5 LYS C 80 HIS C 91 -1 N ILE C 87 O ILE C 107 SHEET 5 C 5 LEU C 64 GLU C 77 -1 N ARG C 68 O GLU C 88 SHEET 1 D 5 VAL D 32 ASN D 38 0 SHEET 2 D 5 LYS D 119 ALA D 127 1 O TYR D 120 N ALA D 33 SHEET 3 D 5 ARG D 104 ARG D 116 -1 N MSE D 110 O CYS D 126 SHEET 4 D 5 LYS D 80 HIS D 91 -1 N ILE D 87 O ILE D 107 SHEET 5 D 5 LEU D 64 GLU D 77 -1 N ILE D 75 O VAL D 82 SSBOND 1 CYS C 126 CYS D 126 1555 1555 2.99 LINK C MSE A 5 N ASP A 6 1555 1555 1.35 LINK C ASP A 24 N MSE A 25 1555 1555 1.34 LINK C MSE A 25 N ALA A 26 1555 1555 1.35 LINK C GLY A 58 N MSE A 59 1555 1555 1.35 LINK C MSE A 59 N LEU A 60 1555 1555 1.35 LINK C ALA A 109 N MSE A 110 1555 1555 1.35 LINK C MSE A 110 N ASP A 111 1555 1555 1.33 LINK C MSE B 5 N ASP B 6 1555 1555 1.36 LINK C ASP B 24 N MSE B 25 1555 1555 1.34 LINK C MSE B 25 N ALA B 26 1555 1555 1.35 LINK C GLY B 58 N MSE B 59 1555 1555 1.32 LINK C MSE B 59 N LEU B 60 1555 1555 1.34 LINK C ALA B 109 N MSE B 110 1555 1555 1.34 LINK C MSE B 110 N ASP B 111 1555 1555 1.34 LINK C MSE C 5 N ASP C 6 1555 1555 1.35 LINK C ASP C 24 N MSE C 25 1555 1555 1.35 LINK C MSE C 25 N ALA C 26 1555 1555 1.35 LINK C GLY C 58 N MSE C 59 1555 1555 1.37 LINK C MSE C 59 N LEU C 60 1555 1555 1.35 LINK C ALA C 109 N MSE C 110 1555 1555 1.36 LINK C MSE C 110 N ASP C 111 1555 1555 1.35 LINK C MSE D 5 N ASP D 6 1555 1555 1.36 LINK C ASP D 24 N MSE D 25 1555 1555 1.35 LINK C MSE D 25 N ALA D 26 1555 1555 1.34 LINK C GLY D 58 N MSE D 59 1555 1555 1.35 LINK C MSE D 59 N LEU D 60 1555 1555 1.34 LINK C ALA D 109 N MSE D 110 1555 1555 1.35 LINK C MSE D 110 N ASP D 111 1555 1555 1.34 SITE 1 AC1 4 PHE A 55 SER A 125 ALA A 127 EDO A 202 SITE 1 AC2 4 ASN A 38 SER A 40 HIS A 123 PEG A 201 SITE 1 AC3 1 LYS B 85 SITE 1 AC4 5 ASN B 38 PRO B 42 PHE B 55 HIS B 123 SITE 2 AC4 5 SER B 125 SITE 1 AC5 1 VAL B 32 SITE 1 AC6 1 LYS C 85 SITE 1 AC7 3 PHE C 55 SER C 125 HOH C 311 SITE 1 AC8 5 ASN C 38 PRO C 42 PHE C 55 HIS C 123 SITE 2 AC8 5 SER C 125 SITE 1 AC9 5 SER C 40 HIS D 72 ARG D 84 LYS D 85 SITE 2 AC9 5 HIS D 108 SITE 1 BC1 2 PHE D 55 ALA D 127 SITE 1 BC2 2 ASN D 38 PRO D 42 CRYST1 66.100 98.076 104.958 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015129 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010196 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009528 0.00000 HETATM 1 N MSE A 5 65.050 -11.748 131.359 1.00153.16 N ANISOU 1 N MSE A 5 18857 17621 21716 5038 -5670 -244 N HETATM 2 CA MSE A 5 64.803 -11.166 130.038 1.00150.41 C ANISOU 2 CA MSE A 5 18272 17443 21434 4902 -5308 -485 C HETATM 3 C MSE A 5 63.259 -11.020 129.783 1.00145.74 C ANISOU 3 C MSE A 5 18038 16583 20755 4463 -5078 -324 C HETATM 4 O MSE A 5 62.632 -11.926 129.223 1.00146.15 O ANISOU 4 O MSE A 5 18392 16258 20879 4524 -5089 -333 O HETATM 5 CB MSE A 5 65.480 -12.051 128.968 1.00157.13 C ANISOU 5 CB MSE A 5 19009 18212 22481 5381 -5370 -774 C HETATM 6 CG MSE A 5 65.595 -11.407 127.582 1.00164.29 C ANISOU 6 CG MSE A 5 19536 19441 23447 5326 -5021 -1076 C HETATM 7 SE MSE A 5 66.677 -9.759 127.513 0.75173.03 SE ANISOU 7 SE MSE A 5 19929 21321 24493 5155 -4810 -1228 SE HETATM 8 CE MSE A 5 66.705 -9.512 125.539 1.00168.85 C ANISOU 8 CE MSE A 5 19062 21043 24052 5192 -4422 -1598 C