HEADER PROTEIN TRANSPORT 01-JUL-13 4LHV TITLE CRYSTAL STRUCTURE OF RAB8 IN ITS INACTIVE GDP-BOUND FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: RAS-RELATED PROTEIN RAB-8A; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 FRAGMENT: UNP RESIDUES 6-176; COMPND 5 SYNONYM: ONCOGENE C-MEL; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RAB8A, MEL, RAB8; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(RIL)DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: OPINE KEYWDS SMALL GTPASE, PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR Z.GUO,X.M.HOU,R.S.GOODY,A.ITZEN REVDAT 3 20-SEP-23 4LHV 1 REMARK SEQADV LINK REVDAT 2 18-DEC-13 4LHV 1 JRNL REVDAT 1 09-OCT-13 4LHV 0 JRNL AUTH Z.GUO,X.HOU,R.S.GOODY,A.ITZEN JRNL TITL INTERMEDIATES IN THE GUANINE NUCLEOTIDE EXCHANGE REACTION OF JRNL TITL 2 RAB8 PROTEIN CATALYZED BY GUANINE NUCLEOTIDE EXCHANGE JRNL TITL 3 FACTORS RABIN8 AND GRAB. JRNL REF J.BIOL.CHEM. V. 288 32466 2013 JRNL REFN ISSN 0021-9258 JRNL PMID 24072714 JRNL DOI 10.1074/JBC.M113.498329 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 63957 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3388 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4711 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.64 REMARK 3 BIN R VALUE (WORKING SET) : 0.2370 REMARK 3 BIN FREE R VALUE SET COUNT : 227 REMARK 3 BIN FREE R VALUE : 0.2690 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6273 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 145 REMARK 3 SOLVENT ATOMS : 453 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.04000 REMARK 3 B22 (A**2) : 0.56000 REMARK 3 B33 (A**2) : -1.66000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.20000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.690 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.160 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.116 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.064 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6530 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4410 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8797 ; 1.354 ; 1.979 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10754 ; 4.199 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 790 ; 6.146 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 298 ;34.630 ;24.799 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1210 ;15.796 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 33 ;16.237 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 984 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7102 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1345 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1422 ; 0.223 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 4370 ; 0.241 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3203 ; 0.183 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 3138 ; 0.112 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 452 ; 0.194 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 11 ; 0.099 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 21 ; 0.308 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 37 ; 0.240 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 28 ; 0.260 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3914 ; 1.904 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1633 ; 4.325 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6254 ; 2.964 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2616 ; 2.080 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2538 ; 3.299 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 176 REMARK 3 ORIGIN FOR THE GROUP (A): -16.2046 38.5344 37.4141 REMARK 3 T TENSOR REMARK 3 T11: -0.0031 T22: 0.0036 REMARK 3 T33: 0.0062 T12: -0.0018 REMARK 3 T13: 0.0031 T23: -0.0009 REMARK 3 L TENSOR REMARK 3 L11: 0.0313 L22: 0.0141 REMARK 3 L33: 0.0332 L12: 0.0197 REMARK 3 L13: -0.0042 L23: 0.0048 REMARK 3 S TENSOR REMARK 3 S11: -0.0059 S12: 0.0004 S13: -0.0013 REMARK 3 S21: -0.0033 S22: 0.0021 S23: -0.0011 REMARK 3 S31: 0.0028 S32: -0.0011 S33: 0.0039 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 5 B 176 REMARK 3 ORIGIN FOR THE GROUP (A): 8.4024 53.3326 12.2765 REMARK 3 T TENSOR REMARK 3 T11: -0.0023 T22: 0.0027 REMARK 3 T33: 0.0053 T12: -0.0017 REMARK 3 T13: 0.0035 T23: 0.0011 REMARK 3 L TENSOR REMARK 3 L11: 0.0544 L22: 0.0407 REMARK 3 L33: 0.0795 L12: 0.0414 REMARK 3 L13: -0.0012 L23: 0.0260 REMARK 3 S TENSOR REMARK 3 S11: -0.0039 S12: 0.0004 S13: -0.0017 REMARK 3 S21: -0.0015 S22: 0.0019 S23: -0.0040 REMARK 3 S31: 0.0048 S32: -0.0005 S33: 0.0020 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 6 C 176 REMARK 3 ORIGIN FOR THE GROUP (A): 13.9460 67.4435 40.9920 REMARK 3 T TENSOR REMARK 3 T11: -0.0045 T22: 0.0047 REMARK 3 T33: 0.0061 T12: -0.0009 REMARK 3 T13: 0.0025 T23: -0.0006 REMARK 3 L TENSOR REMARK 3 L11: 0.0876 L22: 0.0278 REMARK 3 L33: 0.0106 L12: 0.0213 REMARK 3 L13: -0.0030 L23: -0.0043 REMARK 3 S TENSOR REMARK 3 S11: -0.0021 S12: -0.0123 S13: 0.0017 REMARK 3 S21: -0.0039 S22: 0.0004 S23: 0.0005 REMARK 3 S31: 0.0011 S32: 0.0021 S33: 0.0017 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 6 D 176 REMARK 3 ORIGIN FOR THE GROUP (A): -22.1083 68.9622 27.7026 REMARK 3 T TENSOR REMARK 3 T11: -0.0043 T22: 0.0028 REMARK 3 T33: 0.0090 T12: 0.0001 REMARK 3 T13: 0.0008 T23: -0.0004 REMARK 3 L TENSOR REMARK 3 L11: 0.0243 L22: 0.0784 REMARK 3 L33: 0.0130 L12: -0.0059 REMARK 3 L13: 0.0111 L23: -0.0234 REMARK 3 S TENSOR REMARK 3 S11: 0.0013 S12: -0.0001 S13: -0.0005 REMARK 3 S21: -0.0029 S22: -0.0004 S23: 0.0124 REMARK 3 S31: 0.0004 S32: 0.0000 S33: -0.0010 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 5 E 174 REMARK 3 ORIGIN FOR THE GROUP (A): -19.1563 89.4897 7.6638 REMARK 3 T TENSOR REMARK 3 T11: -0.0029 T22: 0.0009 REMARK 3 T33: 0.0086 T12: 0.0000 REMARK 3 T13: 0.0049 T23: -0.0019 REMARK 3 L TENSOR REMARK 3 L11: 0.0926 L22: 0.2618 REMARK 3 L33: 0.1440 L12: -0.0724 REMARK 3 L13: -0.0214 L23: 0.1654 REMARK 3 S TENSOR REMARK 3 S11: 0.0184 S12: -0.0028 S13: -0.0003 REMARK 3 S21: -0.0284 S22: 0.0046 S23: -0.0196 REMARK 3 S31: -0.0160 S32: 0.0068 S33: -0.0230 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 5 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 301 A 434 REMARK 3 RESIDUE RANGE : B 301 B 394 REMARK 3 RESIDUE RANGE : C 301 C 394 REMARK 3 RESIDUE RANGE : D 301 D 384 REMARK 3 RESIDUE RANGE : E 301 E 347 REMARK 3 ORIGIN FOR THE GROUP (A): -6.5583 58.9773 26.7469 REMARK 3 T TENSOR REMARK 3 T11: -0.0028 T22: 0.0039 REMARK 3 T33: 0.0068 T12: -0.0006 REMARK 3 T13: 0.0022 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 0.0003 L22: 0.0020 REMARK 3 L33: 0.0007 L12: -0.0002 REMARK 3 L13: -0.0004 L23: 0.0008 REMARK 3 S TENSOR REMARK 3 S11: -0.0006 S12: -0.0005 S13: 0.0001 REMARK 3 S21: -0.0004 S22: -0.0004 S23: -0.0001 REMARK 3 S31: 0.0004 S32: 0.0001 S33: 0.0010 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4LHV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1000080649. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-MAY-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM, XDS REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 67378 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 19.160 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: 1YZQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: ALL CRYSTALS WERE OBTAINED BY MIXING 1 REMARK 280 UL PROTEIN AND 1 UL RESERVOIR SOLUTION. CRYSTALS OF RAB8A6-176: REMARK 280 GDP WERE OBTAINED BY MIXING OF 1 UL PROTEIN (20 MG/ML, BUFFER: REMARK 280 25 MM HEPES PH 7.5, 40 MM NACL, 1 MM MGCL2, 10 M GDP AND 5 MM REMARK 280 BETA-MERCAPTOETHANOL) WITH 1 UL OF RESERVOIR CONSISTING OF 16% REMARK 280 (W/V) PEG4000, 0.1 M CAAC2, 0.1 M HEPES. THE CRYSTAL WAS REMARK 280 PROTECTED WITH CRYO SOLUTION CONTAINING 30% (W/V) PEG4000, 0.1 M REMARK 280 CAAC2, 0.1 M HEPES PH 7.0 BEFORE DATA COLLECTION, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 58.91800 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.97500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 58.91800 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 37.97500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 362 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 65 REMARK 465 GLY A 66 REMARK 465 GLN A 67 REMARK 465 GLU A 68 REMARK 465 ARG A 69 REMARK 465 PHE A 70 REMARK 465 ARG A 71 REMARK 465 THR A 72 REMARK 465 ILE A 73 REMARK 465 GLY B 3 REMARK 465 SER B 4 REMARK 465 ALA B 65 REMARK 465 GLY B 66 REMARK 465 GLN B 67 REMARK 465 GLU B 68 REMARK 465 ARG B 69 REMARK 465 PHE B 70 REMARK 465 ARG B 71 REMARK 465 THR B 72 REMARK 465 ILE B 73 REMARK 465 THR B 74 REMARK 465 THR B 75 REMARK 465 GLY C 3 REMARK 465 SER C 4 REMARK 465 HIS C 5 REMARK 465 ALA C 65 REMARK 465 GLY C 66 REMARK 465 GLN C 67 REMARK 465 GLU C 68 REMARK 465 ARG C 69 REMARK 465 PHE C 70 REMARK 465 ARG C 71 REMARK 465 THR C 72 REMARK 465 ILE C 73 REMARK 465 THR C 74 REMARK 465 THR C 75 REMARK 465 GLY D 3 REMARK 465 SER D 4 REMARK 465 HIS D 5 REMARK 465 GLY D 42 REMARK 465 ILE D 43 REMARK 465 ALA D 65 REMARK 465 GLY D 66 REMARK 465 GLN D 67 REMARK 465 GLU D 68 REMARK 465 ARG D 69 REMARK 465 PHE D 70 REMARK 465 ARG D 71 REMARK 465 THR D 72 REMARK 465 ILE D 73 REMARK 465 THR D 74 REMARK 465 THR D 75 REMARK 465 GLY E 3 REMARK 465 SER E 4 REMARK 465 PHE E 33 REMARK 465 ASN E 34 REMARK 465 SER E 35 REMARK 465 THR E 36 REMARK 465 PHE E 37 REMARK 465 ILE E 38 REMARK 465 SER E 39 REMARK 465 THR E 40 REMARK 465 ILE E 41 REMARK 465 GLY E 42 REMARK 465 ILE E 43 REMARK 465 GLY E 66 REMARK 465 GLN E 67 REMARK 465 GLU E 68 REMARK 465 ARG E 69 REMARK 465 PHE E 70 REMARK 465 ARG E 71 REMARK 465 THR E 72 REMARK 465 ILE E 73 REMARK 465 THR E 74 REMARK 465 THR E 75 REMARK 465 ALA E 76 REMARK 465 LYS E 175 REMARK 465 LYS E 176 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 77 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG A 79 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 176 CG CD CE NZ REMARK 470 SER B 39 OG REMARK 470 THR B 40 OG1 CG2 REMARK 470 ARG B 79 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 104 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 108 CG CD OE1 OE2 REMARK 470 LYS B 176 CG CD CE NZ REMARK 470 ARG C 79 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 172 CG CD CE NZ REMARK 470 LYS C 175 CG CD CE NZ REMARK 470 LYS C 176 CG CD CE NZ REMARK 470 SER D 39 OG REMARK 470 THR D 40 OG1 CG2 REMARK 470 ILE D 41 CG1 CG2 CD1 REMARK 470 ASP D 44 CG OD1 OD2 REMARK 470 TYR D 77 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG D 79 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 172 CG CD CE NZ REMARK 470 LYS D 175 CG CD CE NZ REMARK 470 LYS D 176 CG CD CE NZ REMARK 470 LYS E 58 CG CD CE NZ REMARK 470 ARG E 79 CG CD NE CZ NH1 NH2 REMARK 470 LYS E 94 CG CD CE NZ REMARK 470 ARG E 104 CG CD NE CZ NH1 NH2 REMARK 470 GLU E 107 CG CD OE1 OE2 REMARK 470 ASP E 113 CG OD1 OD2 REMARK 470 LYS E 128 CG CD CE NZ REMARK 470 GLU E 134 CG CD OE1 OE2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ILE A 61 CA CB CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLY D 144 O HOH D 314 2.07 REMARK 500 O HOH D 303 O HOH D 358 2.10 REMARK 500 O GLY C 144 O HOH C 307 2.17 REMARK 500 OG1 THR D 22 OD2 ASP D 63 2.18 REMARK 500 CB ALA C 76 O HOH C 358 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CE LYS A 58 NZ LYS A 58 2556 1.97 REMARK 500 NE2 HIS B 109 O HOH E 344 3545 2.16 REMARK 500 O HOH A 415 O HOH A 418 2556 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 76 19.84 -61.63 REMARK 500 ASN A 157 14.80 59.58 REMARK 500 ILE B 41 90.00 62.66 REMARK 500 GLU B 107 40.61 -66.43 REMARK 500 GLU B 108 -68.01 -137.10 REMARK 500 LYS B 122 31.99 74.75 REMARK 500 VAL B 125 58.15 -106.62 REMARK 500 ARG C 79 -80.84 -60.87 REMARK 500 LYS C 122 34.56 72.71 REMARK 500 ARG D 79 -47.34 -28.68 REMARK 500 LYS D 122 30.32 72.14 REMARK 500 ASP E 53 55.85 39.93 REMARK 500 THR E 64 51.78 37.76 REMARK 500 ARG E 79 -77.51 -107.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ILE A 41 GLY A 42 -41.25 REMARK 500 SER B 39 THR B 40 148.45 REMARK 500 ILE C 41 GLY C 42 -31.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 22 OG1 REMARK 620 2 GDP A 201 O1B 88.3 REMARK 620 3 HOH A 321 O 89.4 81.1 REMARK 620 4 HOH A 351 O 95.4 89.0 168.9 REMARK 620 5 HOH A 379 O 99.1 170.3 92.7 96.4 REMARK 620 6 HOH A 380 O 170.0 82.2 85.9 87.7 90.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 22 OG1 REMARK 620 2 GDP B 201 O1B 88.6 REMARK 620 3 HOH B 330 O 90.1 87.5 REMARK 620 4 HOH B 342 O 84.9 89.3 174.1 REMARK 620 5 HOH B 372 O 107.1 163.0 86.0 98.4 REMARK 620 6 HOH B 386 O 169.3 80.8 90.6 93.8 83.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR C 22 OG1 REMARK 620 2 GDP C 201 O1B 94.6 REMARK 620 3 HOH C 329 O 94.7 87.7 REMARK 620 4 HOH C 330 O 96.5 94.4 168.4 REMARK 620 5 HOH C 354 O 91.8 171.4 86.1 90.6 REMARK 620 6 HOH C 366 O 174.7 82.6 80.7 88.3 90.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR D 22 OG1 REMARK 620 2 GDP D 201 O1B 101.4 REMARK 620 3 HOH D 304 O 89.8 89.2 REMARK 620 4 HOH D 321 O 90.9 94.1 176.4 REMARK 620 5 HOH D 325 O 83.7 172.9 85.9 90.7 REMARK 620 6 HOH D 369 O 173.8 76.5 84.3 95.0 97.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG E 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR E 22 OG1 REMARK 620 2 GDP E 201 O1B 78.7 REMARK 620 3 HOH E 301 O 150.1 82.1 REMARK 620 4 HOH E 314 O 84.6 86.0 71.4 REMARK 620 5 HOH E 320 O 74.2 83.3 126.0 157.7 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP E 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG E 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4LHW RELATED DB: PDB REMARK 900 RELATED ID: 4LHX RELATED DB: PDB REMARK 900 RELATED ID: 4LHY RELATED DB: PDB REMARK 900 RELATED ID: 4LHZ RELATED DB: PDB REMARK 900 RELATED ID: 4LI0 RELATED DB: PDB DBREF 4LHV A 6 176 UNP P61006 RAB8A_HUMAN 6 176 DBREF 4LHV B 6 176 UNP P61006 RAB8A_HUMAN 6 176 DBREF 4LHV C 6 176 UNP P61006 RAB8A_HUMAN 6 176 DBREF 4LHV D 6 176 UNP P61006 RAB8A_HUMAN 6 176 DBREF 4LHV E 6 176 UNP P61006 RAB8A_HUMAN 6 176 SEQADV 4LHV GLY A 3 UNP P61006 EXPRESSION TAG SEQADV 4LHV SER A 4 UNP P61006 EXPRESSION TAG SEQADV 4LHV HIS A 5 UNP P61006 EXPRESSION TAG SEQADV 4LHV GLY B 3 UNP P61006 EXPRESSION TAG SEQADV 4LHV SER B 4 UNP P61006 EXPRESSION TAG SEQADV 4LHV HIS B 5 UNP P61006 EXPRESSION TAG SEQADV 4LHV GLY C 3 UNP P61006 EXPRESSION TAG SEQADV 4LHV SER C 4 UNP P61006 EXPRESSION TAG SEQADV 4LHV HIS C 5 UNP P61006 EXPRESSION TAG SEQADV 4LHV GLY D 3 UNP P61006 EXPRESSION TAG SEQADV 4LHV SER D 4 UNP P61006 EXPRESSION TAG SEQADV 4LHV HIS D 5 UNP P61006 EXPRESSION TAG SEQADV 4LHV GLY E 3 UNP P61006 EXPRESSION TAG SEQADV 4LHV SER E 4 UNP P61006 EXPRESSION TAG SEQADV 4LHV HIS E 5 UNP P61006 EXPRESSION TAG SEQRES 1 A 174 GLY SER HIS ASP TYR LEU PHE LYS LEU LEU LEU ILE GLY SEQRES 2 A 174 ASP SER GLY VAL GLY LYS THR CYS VAL LEU PHE ARG PHE SEQRES 3 A 174 SER GLU ASP ALA PHE ASN SER THR PHE ILE SER THR ILE SEQRES 4 A 174 GLY ILE ASP PHE LYS ILE ARG THR ILE GLU LEU ASP GLY SEQRES 5 A 174 LYS ARG ILE LYS LEU GLN ILE TRP ASP THR ALA GLY GLN SEQRES 6 A 174 GLU ARG PHE ARG THR ILE THR THR ALA TYR TYR ARG GLY SEQRES 7 A 174 ALA MET GLY ILE MET LEU VAL TYR ASP ILE THR ASN GLU SEQRES 8 A 174 LYS SER PHE ASP ASN ILE ARG ASN TRP ILE ARG ASN ILE SEQRES 9 A 174 GLU GLU HIS ALA SER ALA ASP VAL GLU LYS MET ILE LEU SEQRES 10 A 174 GLY ASN LYS CYS ASP VAL ASN ASP LYS ARG GLN VAL SER SEQRES 11 A 174 LYS GLU ARG GLY GLU LYS LEU ALA LEU ASP TYR GLY ILE SEQRES 12 A 174 LYS PHE MET GLU THR SER ALA LYS ALA ASN ILE ASN VAL SEQRES 13 A 174 GLU ASN ALA PHE PHE THR LEU ALA ARG ASP ILE LYS ALA SEQRES 14 A 174 LYS MET ASP LYS LYS SEQRES 1 B 174 GLY SER HIS ASP TYR LEU PHE LYS LEU LEU LEU ILE GLY SEQRES 2 B 174 ASP SER GLY VAL GLY LYS THR CYS VAL LEU PHE ARG PHE SEQRES 3 B 174 SER GLU ASP ALA PHE ASN SER THR PHE ILE SER THR ILE SEQRES 4 B 174 GLY ILE ASP PHE LYS ILE ARG THR ILE GLU LEU ASP GLY SEQRES 5 B 174 LYS ARG ILE LYS LEU GLN ILE TRP ASP THR ALA GLY GLN SEQRES 6 B 174 GLU ARG PHE ARG THR ILE THR THR ALA TYR TYR ARG GLY SEQRES 7 B 174 ALA MET GLY ILE MET LEU VAL TYR ASP ILE THR ASN GLU SEQRES 8 B 174 LYS SER PHE ASP ASN ILE ARG ASN TRP ILE ARG ASN ILE SEQRES 9 B 174 GLU GLU HIS ALA SER ALA ASP VAL GLU LYS MET ILE LEU SEQRES 10 B 174 GLY ASN LYS CYS ASP VAL ASN ASP LYS ARG GLN VAL SER SEQRES 11 B 174 LYS GLU ARG GLY GLU LYS LEU ALA LEU ASP TYR GLY ILE SEQRES 12 B 174 LYS PHE MET GLU THR SER ALA LYS ALA ASN ILE ASN VAL SEQRES 13 B 174 GLU ASN ALA PHE PHE THR LEU ALA ARG ASP ILE LYS ALA SEQRES 14 B 174 LYS MET ASP LYS LYS SEQRES 1 C 174 GLY SER HIS ASP TYR LEU PHE LYS LEU LEU LEU ILE GLY SEQRES 2 C 174 ASP SER GLY VAL GLY LYS THR CYS VAL LEU PHE ARG PHE SEQRES 3 C 174 SER GLU ASP ALA PHE ASN SER THR PHE ILE SER THR ILE SEQRES 4 C 174 GLY ILE ASP PHE LYS ILE ARG THR ILE GLU LEU ASP GLY SEQRES 5 C 174 LYS ARG ILE LYS LEU GLN ILE TRP ASP THR ALA GLY GLN SEQRES 6 C 174 GLU ARG PHE ARG THR ILE THR THR ALA TYR TYR ARG GLY SEQRES 7 C 174 ALA MET GLY ILE MET LEU VAL TYR ASP ILE THR ASN GLU SEQRES 8 C 174 LYS SER PHE ASP ASN ILE ARG ASN TRP ILE ARG ASN ILE SEQRES 9 C 174 GLU GLU HIS ALA SER ALA ASP VAL GLU LYS MET ILE LEU SEQRES 10 C 174 GLY ASN LYS CYS ASP VAL ASN ASP LYS ARG GLN VAL SER SEQRES 11 C 174 LYS GLU ARG GLY GLU LYS LEU ALA LEU ASP TYR GLY ILE SEQRES 12 C 174 LYS PHE MET GLU THR SER ALA LYS ALA ASN ILE ASN VAL SEQRES 13 C 174 GLU ASN ALA PHE PHE THR LEU ALA ARG ASP ILE LYS ALA SEQRES 14 C 174 LYS MET ASP LYS LYS SEQRES 1 D 174 GLY SER HIS ASP TYR LEU PHE LYS LEU LEU LEU ILE GLY SEQRES 2 D 174 ASP SER GLY VAL GLY LYS THR CYS VAL LEU PHE ARG PHE SEQRES 3 D 174 SER GLU ASP ALA PHE ASN SER THR PHE ILE SER THR ILE SEQRES 4 D 174 GLY ILE ASP PHE LYS ILE ARG THR ILE GLU LEU ASP GLY SEQRES 5 D 174 LYS ARG ILE LYS LEU GLN ILE TRP ASP THR ALA GLY GLN SEQRES 6 D 174 GLU ARG PHE ARG THR ILE THR THR ALA TYR TYR ARG GLY SEQRES 7 D 174 ALA MET GLY ILE MET LEU VAL TYR ASP ILE THR ASN GLU SEQRES 8 D 174 LYS SER PHE ASP ASN ILE ARG ASN TRP ILE ARG ASN ILE SEQRES 9 D 174 GLU GLU HIS ALA SER ALA ASP VAL GLU LYS MET ILE LEU SEQRES 10 D 174 GLY ASN LYS CYS ASP VAL ASN ASP LYS ARG GLN VAL SER SEQRES 11 D 174 LYS GLU ARG GLY GLU LYS LEU ALA LEU ASP TYR GLY ILE SEQRES 12 D 174 LYS PHE MET GLU THR SER ALA LYS ALA ASN ILE ASN VAL SEQRES 13 D 174 GLU ASN ALA PHE PHE THR LEU ALA ARG ASP ILE LYS ALA SEQRES 14 D 174 LYS MET ASP LYS LYS SEQRES 1 E 174 GLY SER HIS ASP TYR LEU PHE LYS LEU LEU LEU ILE GLY SEQRES 2 E 174 ASP SER GLY VAL GLY LYS THR CYS VAL LEU PHE ARG PHE SEQRES 3 E 174 SER GLU ASP ALA PHE ASN SER THR PHE ILE SER THR ILE SEQRES 4 E 174 GLY ILE ASP PHE LYS ILE ARG THR ILE GLU LEU ASP GLY SEQRES 5 E 174 LYS ARG ILE LYS LEU GLN ILE TRP ASP THR ALA GLY GLN SEQRES 6 E 174 GLU ARG PHE ARG THR ILE THR THR ALA TYR TYR ARG GLY SEQRES 7 E 174 ALA MET GLY ILE MET LEU VAL TYR ASP ILE THR ASN GLU SEQRES 8 E 174 LYS SER PHE ASP ASN ILE ARG ASN TRP ILE ARG ASN ILE SEQRES 9 E 174 GLU GLU HIS ALA SER ALA ASP VAL GLU LYS MET ILE LEU SEQRES 10 E 174 GLY ASN LYS CYS ASP VAL ASN ASP LYS ARG GLN VAL SER SEQRES 11 E 174 LYS GLU ARG GLY GLU LYS LEU ALA LEU ASP TYR GLY ILE SEQRES 12 E 174 LYS PHE MET GLU THR SER ALA LYS ALA ASN ILE ASN VAL SEQRES 13 E 174 GLU ASN ALA PHE PHE THR LEU ALA ARG ASP ILE LYS ALA SEQRES 14 E 174 LYS MET ASP LYS LYS HET GDP A 201 28 HET MG A 202 1 HET GDP B 201 28 HET MG B 202 1 HET GDP C 201 28 HET MG C 202 1 HET GDP D 201 28 HET MG D 202 1 HET GDP E 201 28 HET MG E 202 1 HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 6 GDP 5(C10 H15 N5 O11 P2) FORMUL 7 MG 5(MG 2+) FORMUL 16 HOH *453(H2 O) HELIX 1 1 GLY A 20 ASP A 31 1 12 HELIX 2 2 THR A 74 TYR A 78 5 5 HELIX 3 3 ASN A 92 ASN A 98 1 7 HELIX 4 4 ASN A 98 ALA A 110 1 13 HELIX 5 5 VAL A 125 ARG A 129 5 5 HELIX 6 6 SER A 132 GLY A 144 1 13 HELIX 7 7 ASN A 157 LYS A 176 1 20 HELIX 8 8 GLY B 20 ASP B 31 1 12 HELIX 9 9 ASN B 92 ALA B 110 1 19 HELIX 10 10 VAL B 125 ARG B 129 5 5 HELIX 11 11 SER B 132 TYR B 143 1 12 HELIX 12 12 ASN B 157 ASP B 174 1 18 HELIX 13 13 GLY C 20 ASP C 31 1 12 HELIX 14 14 ASN C 92 ASN C 98 1 7 HELIX 15 15 ASN C 98 ALA C 110 1 13 HELIX 16 16 VAL C 125 ARG C 129 5 5 HELIX 17 17 SER C 132 GLY C 144 1 13 HELIX 18 18 ASN C 157 ASP C 174 1 18 HELIX 19 19 GLY D 20 ASP D 31 1 12 HELIX 20 20 ASN D 92 ASN D 98 1 7 HELIX 21 21 ASN D 98 ALA D 110 1 13 HELIX 22 22 VAL D 125 ARG D 129 5 5 HELIX 23 23 SER D 132 GLY D 144 1 13 HELIX 24 24 ASN D 157 LYS D 176 1 20 HELIX 25 25 GLY E 20 ASP E 31 1 12 HELIX 26 26 ASN E 92 ALA E 110 1 19 HELIX 27 27 VAL E 125 ARG E 129 5 5 HELIX 28 28 SER E 132 TYR E 143 1 12 HELIX 29 29 ASN E 157 ASP E 174 1 18 SHEET 1 A 6 PHE A 45 LEU A 52 0 SHEET 2 A 6 LYS A 55 TRP A 62 -1 O ILE A 61 N LYS A 46 SHEET 3 A 6 TYR A 7 GLY A 15 1 N LEU A 11 O TRP A 62 SHEET 4 A 6 GLY A 83 ASP A 89 1 O VAL A 87 N ILE A 14 SHEET 5 A 6 GLU A 115 ASN A 121 1 O MET A 117 N LEU A 86 SHEET 6 A 6 LYS A 146 GLU A 149 1 O LYS A 146 N ILE A 118 SHEET 1 B 6 PHE B 45 LEU B 52 0 SHEET 2 B 6 LYS B 55 ASP B 63 -1 O ILE B 57 N ILE B 50 SHEET 3 B 6 TYR B 7 ILE B 14 1 N LEU B 11 O GLN B 60 SHEET 4 B 6 GLY B 83 ASP B 89 1 O VAL B 87 N ILE B 14 SHEET 5 B 6 GLU B 115 ASN B 121 1 O LEU B 119 N LEU B 86 SHEET 6 B 6 LYS B 146 GLU B 149 1 O LYS B 146 N ILE B 118 SHEET 1 C 6 PHE C 45 LEU C 52 0 SHEET 2 C 6 LYS C 55 ASP C 63 -1 O LYS C 55 N LEU C 52 SHEET 3 C 6 TYR C 7 ILE C 14 1 N TYR C 7 O LYS C 58 SHEET 4 C 6 ALA C 81 ASP C 89 1 O MET C 85 N LEU C 12 SHEET 5 C 6 GLU C 115 ASN C 121 1 O ASN C 121 N TYR C 88 SHEET 6 C 6 LYS C 146 GLU C 149 1 O LYS C 146 N ILE C 118 SHEET 1 D 6 PHE D 45 LEU D 52 0 SHEET 2 D 6 LYS D 55 ASP D 63 -1 O ILE D 57 N ILE D 50 SHEET 3 D 6 TYR D 7 ILE D 14 1 N PHE D 9 O LYS D 58 SHEET 4 D 6 GLY D 83 ASP D 89 1 O MET D 85 N LEU D 12 SHEET 5 D 6 GLU D 115 ASN D 121 1 O LEU D 119 N LEU D 86 SHEET 6 D 6 LYS D 146 GLU D 149 1 O LYS D 146 N ILE D 118 SHEET 1 E 6 PHE E 45 LEU E 52 0 SHEET 2 E 6 LYS E 55 ASP E 63 -1 O ILE E 57 N ILE E 50 SHEET 3 E 6 TYR E 7 ILE E 14 1 N LEU E 11 O TRP E 62 SHEET 4 E 6 GLY E 83 ASP E 89 1 O MET E 85 N ILE E 14 SHEET 5 E 6 GLU E 115 ASN E 121 1 O LEU E 119 N LEU E 86 SHEET 6 E 6 LYS E 146 GLU E 149 1 O LYS E 146 N ILE E 118 LINK OG1 THR A 22 MG MG A 202 1555 1555 2.08 LINK O1B GDP A 201 MG MG A 202 1555 1555 2.03 LINK MG MG A 202 O HOH A 321 1555 1555 2.15 LINK MG MG A 202 O HOH A 351 1555 1555 1.89 LINK MG MG A 202 O HOH A 379 1555 1555 1.98 LINK MG MG A 202 O HOH A 380 1555 1555 2.25 LINK OG1 THR B 22 MG MG B 202 1555 1555 2.12 LINK O1B GDP B 201 MG MG B 202 1555 1555 2.08 LINK MG MG B 202 O HOH B 330 1555 1555 2.12 LINK MG MG B 202 O HOH B 342 1555 1555 1.86 LINK MG MG B 202 O HOH B 372 1555 1555 1.99 LINK MG MG B 202 O HOH B 386 1555 1555 2.33 LINK OG1 THR C 22 MG MG C 202 1555 1555 1.97 LINK O1B GDP C 201 MG MG C 202 1555 1555 2.11 LINK MG MG C 202 O HOH C 329 1555 1555 2.12 LINK MG MG C 202 O HOH C 330 1555 1555 1.90 LINK MG MG C 202 O HOH C 354 1555 1555 1.96 LINK MG MG C 202 O HOH C 366 1555 1555 2.03 LINK OG1 THR D 22 MG MG D 202 1555 1555 2.19 LINK O1B GDP D 201 MG MG D 202 1555 1555 1.90 LINK MG MG D 202 O HOH D 304 1555 1555 1.96 LINK MG MG D 202 O HOH D 321 1555 1555 1.98 LINK MG MG D 202 O HOH D 325 1555 1555 1.74 LINK MG MG D 202 O HOH D 369 1555 1555 2.65 LINK OG1 THR E 22 MG MG E 202 1555 1555 2.40 LINK O1B GDP E 201 MG MG E 202 1555 1555 2.19 LINK MG MG E 202 O HOH E 301 1555 1555 2.58 LINK MG MG E 202 O HOH E 314 1555 1555 2.36 LINK MG MG E 202 O HOH E 320 1555 1555 2.13 CISPEP 1 GLY A 3 SER A 4 0 1.80 SITE 1 AC1 25 GLY A 18 VAL A 19 GLY A 20 LYS A 21 SITE 2 AC1 25 THR A 22 CYS A 23 PHE A 33 ASN A 34 SITE 3 AC1 25 ASN A 121 LYS A 122 ASP A 124 VAL A 125 SITE 4 AC1 25 SER A 151 ALA A 152 LYS A 153 MG A 202 SITE 5 AC1 25 HOH A 321 HOH A 349 HOH A 351 HOH A 356 SITE 6 AC1 25 HOH A 380 GLU B 51 GLY B 54 LYS B 55 SITE 7 AC1 25 ARG B 56 SITE 1 AC2 6 THR A 22 GDP A 201 HOH A 321 HOH A 351 SITE 2 AC2 6 HOH A 379 HOH A 380 SITE 1 AC3 22 SER B 17 GLY B 18 VAL B 19 GLY B 20 SITE 2 AC3 22 LYS B 21 THR B 22 CYS B 23 PHE B 33 SITE 3 AC3 22 ASN B 121 LYS B 122 ASP B 124 VAL B 125 SITE 4 AC3 22 SER B 151 ALA B 152 LYS B 153 MG B 202 SITE 5 AC3 22 HOH B 306 HOH B 312 HOH B 330 HOH B 342 SITE 6 AC3 22 HOH B 386 GLY E 54 SITE 1 AC4 6 THR B 22 GDP B 201 HOH B 330 HOH B 342 SITE 2 AC4 6 HOH B 372 HOH B 386 SITE 1 AC5 27 ASP C 16 SER C 17 GLY C 18 VAL C 19 SITE 2 AC5 27 GLY C 20 LYS C 21 THR C 22 CYS C 23 SITE 3 AC5 27 PHE C 33 ASN C 34 ASN C 121 LYS C 122 SITE 4 AC5 27 ASP C 124 VAL C 125 SER C 151 ALA C 152 SITE 5 AC5 27 LYS C 153 MG C 202 HOH C 329 HOH C 330 SITE 6 AC5 27 HOH C 356 HOH C 366 HOH C 367 GLU D 51 SITE 7 AC5 27 GLY D 54 ARG D 56 HOH D 334 SITE 1 AC6 6 THR C 22 GDP C 201 HOH C 329 HOH C 330 SITE 2 AC6 6 HOH C 354 HOH C 366 SITE 1 AC7 22 SER D 17 GLY D 18 VAL D 19 GLY D 20 SITE 2 AC7 22 LYS D 21 THR D 22 CYS D 23 PHE D 33 SITE 3 AC7 22 PHE D 37 ASN D 121 LYS D 122 ASP D 124 SITE 4 AC7 22 VAL D 125 SER D 151 ALA D 152 LYS D 153 SITE 5 AC7 22 MG D 202 HOH D 304 HOH D 316 HOH D 321 SITE 6 AC7 22 HOH D 347 HOH D 369 SITE 1 AC8 7 THR D 22 ASP D 63 GDP D 201 HOH D 304 SITE 2 AC8 7 HOH D 321 HOH D 325 HOH D 369 SITE 1 AC9 19 ASP E 16 SER E 17 GLY E 18 VAL E 19 SITE 2 AC9 19 GLY E 20 LYS E 21 THR E 22 CYS E 23 SITE 3 AC9 19 ASN E 121 LYS E 122 ASP E 124 SER E 151 SITE 4 AC9 19 ALA E 152 LYS E 153 MG E 202 HOH E 301 SITE 5 AC9 19 HOH E 314 HOH E 319 HOH E 320 SITE 1 BC1 5 THR E 22 GDP E 201 HOH E 301 HOH E 314 SITE 2 BC1 5 HOH E 320 CRYST1 117.836 75.950 106.618 90.00 98.44 90.00 C 1 2 1 20 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008486 0.000000 0.001259 0.00000 SCALE2 0.000000 0.013167 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009482 0.00000