data_4LIU # _entry.id 4LIU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4LIU RCSB RCSB080683 WWPDB D_1000080683 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4LIT 'Same protein in complex with cobalt and 2-oxoglutarate' unspecified PDB 4LIV 'Same protein in complex with cobalt and succinic acid' unspecified # _pdbx_database_status.entry_id 4LIU _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-07-03 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Brissett, N.C.' 1 'Doherty, A.J.' 2 'Fox, G.C.' 3 # _citation.id primary _citation.title 'Ribosomal oxygenases are structurally conserved from prokaryotes to humans.' _citation.journal_abbrev Nature _citation.journal_volume 509 _citation.page_first 422 _citation.page_last 426 _citation.year 2014 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24814345 _citation.pdbx_database_id_DOI 10.1038/nature13263 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Chowdhury, R.' 1 primary 'Sekirnik, R.' 2 primary 'Brissett, N.C.' 3 primary 'Krojer, T.' 4 primary 'Ho, C.H.' 5 primary 'Ng, S.S.' 6 primary 'Clifton, I.J.' 7 primary 'Ge, W.' 8 primary 'Kershaw, N.J.' 9 primary 'Fox, G.C.' 10 primary 'Muniz, J.R.' 11 primary 'Vollmar, M.' 12 primary 'Phillips, C.' 13 primary 'Pilka, E.S.' 14 primary 'Kavanagh, K.L.' 15 primary 'von Delft, F.' 16 primary 'Oppermann, U.' 17 primary 'McDonough, M.A.' 18 primary 'Doherty, A.J.' 19 primary 'Schofield, C.J.' 20 # _cell.entry_id 4LIU _cell.length_a 75.110 _cell.length_b 75.110 _cell.length_c 209.950 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4LIU _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '50S ribosomal protein L16 arginine hydroxylase' 46834.152 1 1.14.11.- ? ? ? 2 non-polymer syn 'TRIS(HYDROXYETHYL)AMINOMETHANE' 163.215 1 ? ? ? ? 3 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 4 water nat water 18.015 113 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Ribosomal oxygenase YcfD, ROX' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)GSSHHHHHHSSGLVPRGSH(MSE)AS(MSE)TGGEE(MSE)GRGS(MSE)EYQLTLNWPDFLERHWQKRPVVLKR GFNNFIDPISPDELAGLA(MSE)ESEVDSRLVSHQDGKWQVSHGPFESYDHLGETNWSLLVQAVNHWHEPTAAL(MSE)R PFRELPDWRIDDL(MSE)ISFSVPGGGVGPHLDQYDVFIIQGTGRRRWRVGEKLQ(MSE)KQHCPHPDLLQVDPFEAIID EELEPGDILYIPPGFPHEGYALENA(MSE)NYSVGFRAPNTRELISGFADYVLQRELGGNYYSDPDVPPRAHPADVLPQE (MSE)DKLRE(MSE)(MSE)LELINQPEHFKQWFGEFISQSRHELDIAPPEPPYQPDEIYDALKQGEVLVRLGGLRVLRI GDDVYANGEKIDSPHRPALDALASNIALTAENFGDALEDPSFLA(MSE)LAALVNSGYWFFEG ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSHMASMTGGEEMGRGSMEYQLTLNWPDFLERHWQKRPVVLKRGFNNFIDPISPDELAGLAME SEVDSRLVSHQDGKWQVSHGPFESYDHLGETNWSLLVQAVNHWHEPTAALMRPFRELPDWRIDDLMISFSVPGGGVGPHL DQYDVFIIQGTGRRRWRVGEKLQMKQHCPHPDLLQVDPFEAIIDEELEPGDILYIPPGFPHEGYALENAMNYSVGFRAPN TRELISGFADYVLQRELGGNYYSDPDVPPRAHPADVLPQEMDKLREMMLELINQPEHFKQWFGEFISQSRHELDIAPPEP PYQPDEIYDALKQGEVLVRLGGLRVLRIGDDVYANGEKIDSPHRPALDALASNIALTAENFGDALEDPSFLAMLAALVNS GYWFFEG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MSE n 1 22 ALA n 1 23 SER n 1 24 MSE n 1 25 THR n 1 26 GLY n 1 27 GLY n 1 28 GLU n 1 29 GLU n 1 30 MSE n 1 31 GLY n 1 32 ARG n 1 33 GLY n 1 34 SER n 1 35 MSE n 1 36 GLU n 1 37 TYR n 1 38 GLN n 1 39 LEU n 1 40 THR n 1 41 LEU n 1 42 ASN n 1 43 TRP n 1 44 PRO n 1 45 ASP n 1 46 PHE n 1 47 LEU n 1 48 GLU n 1 49 ARG n 1 50 HIS n 1 51 TRP n 1 52 GLN n 1 53 LYS n 1 54 ARG n 1 55 PRO n 1 56 VAL n 1 57 VAL n 1 58 LEU n 1 59 LYS n 1 60 ARG n 1 61 GLY n 1 62 PHE n 1 63 ASN n 1 64 ASN n 1 65 PHE n 1 66 ILE n 1 67 ASP n 1 68 PRO n 1 69 ILE n 1 70 SER n 1 71 PRO n 1 72 ASP n 1 73 GLU n 1 74 LEU n 1 75 ALA n 1 76 GLY n 1 77 LEU n 1 78 ALA n 1 79 MSE n 1 80 GLU n 1 81 SER n 1 82 GLU n 1 83 VAL n 1 84 ASP n 1 85 SER n 1 86 ARG n 1 87 LEU n 1 88 VAL n 1 89 SER n 1 90 HIS n 1 91 GLN n 1 92 ASP n 1 93 GLY n 1 94 LYS n 1 95 TRP n 1 96 GLN n 1 97 VAL n 1 98 SER n 1 99 HIS n 1 100 GLY n 1 101 PRO n 1 102 PHE n 1 103 GLU n 1 104 SER n 1 105 TYR n 1 106 ASP n 1 107 HIS n 1 108 LEU n 1 109 GLY n 1 110 GLU n 1 111 THR n 1 112 ASN n 1 113 TRP n 1 114 SER n 1 115 LEU n 1 116 LEU n 1 117 VAL n 1 118 GLN n 1 119 ALA n 1 120 VAL n 1 121 ASN n 1 122 HIS n 1 123 TRP n 1 124 HIS n 1 125 GLU n 1 126 PRO n 1 127 THR n 1 128 ALA n 1 129 ALA n 1 130 LEU n 1 131 MSE n 1 132 ARG n 1 133 PRO n 1 134 PHE n 1 135 ARG n 1 136 GLU n 1 137 LEU n 1 138 PRO n 1 139 ASP n 1 140 TRP n 1 141 ARG n 1 142 ILE n 1 143 ASP n 1 144 ASP n 1 145 LEU n 1 146 MSE n 1 147 ILE n 1 148 SER n 1 149 PHE n 1 150 SER n 1 151 VAL n 1 152 PRO n 1 153 GLY n 1 154 GLY n 1 155 GLY n 1 156 VAL n 1 157 GLY n 1 158 PRO n 1 159 HIS n 1 160 LEU n 1 161 ASP n 1 162 GLN n 1 163 TYR n 1 164 ASP n 1 165 VAL n 1 166 PHE n 1 167 ILE n 1 168 ILE n 1 169 GLN n 1 170 GLY n 1 171 THR n 1 172 GLY n 1 173 ARG n 1 174 ARG n 1 175 ARG n 1 176 TRP n 1 177 ARG n 1 178 VAL n 1 179 GLY n 1 180 GLU n 1 181 LYS n 1 182 LEU n 1 183 GLN n 1 184 MSE n 1 185 LYS n 1 186 GLN n 1 187 HIS n 1 188 CYS n 1 189 PRO n 1 190 HIS n 1 191 PRO n 1 192 ASP n 1 193 LEU n 1 194 LEU n 1 195 GLN n 1 196 VAL n 1 197 ASP n 1 198 PRO n 1 199 PHE n 1 200 GLU n 1 201 ALA n 1 202 ILE n 1 203 ILE n 1 204 ASP n 1 205 GLU n 1 206 GLU n 1 207 LEU n 1 208 GLU n 1 209 PRO n 1 210 GLY n 1 211 ASP n 1 212 ILE n 1 213 LEU n 1 214 TYR n 1 215 ILE n 1 216 PRO n 1 217 PRO n 1 218 GLY n 1 219 PHE n 1 220 PRO n 1 221 HIS n 1 222 GLU n 1 223 GLY n 1 224 TYR n 1 225 ALA n 1 226 LEU n 1 227 GLU n 1 228 ASN n 1 229 ALA n 1 230 MSE n 1 231 ASN n 1 232 TYR n 1 233 SER n 1 234 VAL n 1 235 GLY n 1 236 PHE n 1 237 ARG n 1 238 ALA n 1 239 PRO n 1 240 ASN n 1 241 THR n 1 242 ARG n 1 243 GLU n 1 244 LEU n 1 245 ILE n 1 246 SER n 1 247 GLY n 1 248 PHE n 1 249 ALA n 1 250 ASP n 1 251 TYR n 1 252 VAL n 1 253 LEU n 1 254 GLN n 1 255 ARG n 1 256 GLU n 1 257 LEU n 1 258 GLY n 1 259 GLY n 1 260 ASN n 1 261 TYR n 1 262 TYR n 1 263 SER n 1 264 ASP n 1 265 PRO n 1 266 ASP n 1 267 VAL n 1 268 PRO n 1 269 PRO n 1 270 ARG n 1 271 ALA n 1 272 HIS n 1 273 PRO n 1 274 ALA n 1 275 ASP n 1 276 VAL n 1 277 LEU n 1 278 PRO n 1 279 GLN n 1 280 GLU n 1 281 MSE n 1 282 ASP n 1 283 LYS n 1 284 LEU n 1 285 ARG n 1 286 GLU n 1 287 MSE n 1 288 MSE n 1 289 LEU n 1 290 GLU n 1 291 LEU n 1 292 ILE n 1 293 ASN n 1 294 GLN n 1 295 PRO n 1 296 GLU n 1 297 HIS n 1 298 PHE n 1 299 LYS n 1 300 GLN n 1 301 TRP n 1 302 PHE n 1 303 GLY n 1 304 GLU n 1 305 PHE n 1 306 ILE n 1 307 SER n 1 308 GLN n 1 309 SER n 1 310 ARG n 1 311 HIS n 1 312 GLU n 1 313 LEU n 1 314 ASP n 1 315 ILE n 1 316 ALA n 1 317 PRO n 1 318 PRO n 1 319 GLU n 1 320 PRO n 1 321 PRO n 1 322 TYR n 1 323 GLN n 1 324 PRO n 1 325 ASP n 1 326 GLU n 1 327 ILE n 1 328 TYR n 1 329 ASP n 1 330 ALA n 1 331 LEU n 1 332 LYS n 1 333 GLN n 1 334 GLY n 1 335 GLU n 1 336 VAL n 1 337 LEU n 1 338 VAL n 1 339 ARG n 1 340 LEU n 1 341 GLY n 1 342 GLY n 1 343 LEU n 1 344 ARG n 1 345 VAL n 1 346 LEU n 1 347 ARG n 1 348 ILE n 1 349 GLY n 1 350 ASP n 1 351 ASP n 1 352 VAL n 1 353 TYR n 1 354 ALA n 1 355 ASN n 1 356 GLY n 1 357 GLU n 1 358 LYS n 1 359 ILE n 1 360 ASP n 1 361 SER n 1 362 PRO n 1 363 HIS n 1 364 ARG n 1 365 PRO n 1 366 ALA n 1 367 LEU n 1 368 ASP n 1 369 ALA n 1 370 LEU n 1 371 ALA n 1 372 SER n 1 373 ASN n 1 374 ILE n 1 375 ALA n 1 376 LEU n 1 377 THR n 1 378 ALA n 1 379 GLU n 1 380 ASN n 1 381 PHE n 1 382 GLY n 1 383 ASP n 1 384 ALA n 1 385 LEU n 1 386 GLU n 1 387 ASP n 1 388 PRO n 1 389 SER n 1 390 PHE n 1 391 LEU n 1 392 ALA n 1 393 MSE n 1 394 LEU n 1 395 ALA n 1 396 ALA n 1 397 LEU n 1 398 VAL n 1 399 ASN n 1 400 SER n 1 401 GLY n 1 402 TYR n 1 403 TRP n 1 404 PHE n 1 405 PHE n 1 406 GLU n 1 407 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'b1128, JW1114, ycfD' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain K-12 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain B834s _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code YCFD_ECOLI _struct_ref.pdbx_db_accession P27431 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EYQLTLNWPDFLERHWQKRPVVLKRGFNNFIDPISPDELAGLAMESEVDSRLVSHQDGKWQVSHGPFESYDHLGETNWSL LVQAVNHWHEPTAALMRPFRELPDWRIDDLMISFSVPGGGVGPHLDQYDVFIIQGTGRRRWRVGEKLQMKQHCPHPDLLQ VDPFEAIIDEELEPGDILYIPPGFPHEGYALENAMNYSVGFRAPNTRELISGFADYVLQRELGGNYYSDPDVPPRAHPAD VLPQEMDKLREMMLELINQPEHFKQWFGEFISQSRHELDIAPPEPPYQPDEIYDALKQGEVLVRLGGLRVLRIGDDVYAN GEKIDSPHRPALDALASNIALTAENFGDALEDPSFLAMLAALVNSGYWFFEG ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4LIU _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 36 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 407 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P27431 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 373 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 36 _struct_ref_seq.pdbx_auth_seq_align_end 407 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4LIU MSE A 1 ? UNP P27431 ? ? 'EXPRESSION TAG' 1 1 1 4LIU GLY A 2 ? UNP P27431 ? ? 'EXPRESSION TAG' 2 2 1 4LIU SER A 3 ? UNP P27431 ? ? 'EXPRESSION TAG' 3 3 1 4LIU SER A 4 ? UNP P27431 ? ? 'EXPRESSION TAG' 4 4 1 4LIU HIS A 5 ? UNP P27431 ? ? 'EXPRESSION TAG' 5 5 1 4LIU HIS A 6 ? UNP P27431 ? ? 'EXPRESSION TAG' 6 6 1 4LIU HIS A 7 ? UNP P27431 ? ? 'EXPRESSION TAG' 7 7 1 4LIU HIS A 8 ? UNP P27431 ? ? 'EXPRESSION TAG' 8 8 1 4LIU HIS A 9 ? UNP P27431 ? ? 'EXPRESSION TAG' 9 9 1 4LIU HIS A 10 ? UNP P27431 ? ? 'EXPRESSION TAG' 10 10 1 4LIU SER A 11 ? UNP P27431 ? ? 'EXPRESSION TAG' 11 11 1 4LIU SER A 12 ? UNP P27431 ? ? 'EXPRESSION TAG' 12 12 1 4LIU GLY A 13 ? UNP P27431 ? ? 'EXPRESSION TAG' 13 13 1 4LIU LEU A 14 ? UNP P27431 ? ? 'EXPRESSION TAG' 14 14 1 4LIU VAL A 15 ? UNP P27431 ? ? 'EXPRESSION TAG' 15 15 1 4LIU PRO A 16 ? UNP P27431 ? ? 'EXPRESSION TAG' 16 16 1 4LIU ARG A 17 ? UNP P27431 ? ? 'EXPRESSION TAG' 17 17 1 4LIU GLY A 18 ? UNP P27431 ? ? 'EXPRESSION TAG' 18 18 1 4LIU SER A 19 ? UNP P27431 ? ? 'EXPRESSION TAG' 19 19 1 4LIU HIS A 20 ? UNP P27431 ? ? 'EXPRESSION TAG' 20 20 1 4LIU MSE A 21 ? UNP P27431 ? ? 'EXPRESSION TAG' 21 21 1 4LIU ALA A 22 ? UNP P27431 ? ? 'EXPRESSION TAG' 22 22 1 4LIU SER A 23 ? UNP P27431 ? ? 'EXPRESSION TAG' 23 23 1 4LIU MSE A 24 ? UNP P27431 ? ? 'EXPRESSION TAG' 24 24 1 4LIU THR A 25 ? UNP P27431 ? ? 'EXPRESSION TAG' 25 25 1 4LIU GLY A 26 ? UNP P27431 ? ? 'EXPRESSION TAG' 26 26 1 4LIU GLY A 27 ? UNP P27431 ? ? 'EXPRESSION TAG' 27 27 1 4LIU GLU A 28 ? UNP P27431 ? ? 'EXPRESSION TAG' 28 28 1 4LIU GLU A 29 ? UNP P27431 ? ? 'EXPRESSION TAG' 29 29 1 4LIU MSE A 30 ? UNP P27431 ? ? 'EXPRESSION TAG' 30 30 1 4LIU GLY A 31 ? UNP P27431 ? ? 'EXPRESSION TAG' 31 31 1 4LIU ARG A 32 ? UNP P27431 ? ? 'EXPRESSION TAG' 32 32 1 4LIU GLY A 33 ? UNP P27431 ? ? 'EXPRESSION TAG' 33 33 1 4LIU SER A 34 ? UNP P27431 ? ? 'EXPRESSION TAG' 34 34 1 4LIU MSE A 35 ? UNP P27431 ? ? 'EXPRESSION TAG' 35 35 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TAM non-polymer . 'TRIS(HYDROXYETHYL)AMINOMETHANE' ? 'C7 H17 N O3' 163.215 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4LIU _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.17 _exptl_crystal.density_percent_sol 61.17 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 285 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '50mM Tris.HCl pH 7.5, 0.4M Ammonium dihydrogen phosphate, VAPOR DIFFUSION, HANGING DROP, temperature 285K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2006-03-01 _diffrn_detector.details 'double crystal monochromator' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol SAD _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9798 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM16' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM16 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9798 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4LIU _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 70.721 _reflns.d_resolution_high 2.700 _reflns.number_obs 17365 _reflns.number_all 17365 _reflns.percent_possible_obs 99.900 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.142 _reflns.pdbx_netI_over_sigmaI 11.000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.100 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared 1 1 2.700 2.850 100.000 0.872 0.872 0.900 6.300 ? ? ? ? ? ? 1 2 2.850 3.020 100.000 0.601 0.601 1.300 6.300 ? ? ? ? ? ? 1 3 3.020 3.230 100.000 0.381 0.381 2.000 6.300 ? ? ? ? ? ? 1 4 3.230 3.490 100.000 0.218 0.218 3.500 6.300 ? ? ? ? ? ? 1 5 3.490 3.820 99.900 0.148 0.148 4.900 6.200 ? ? ? ? ? ? 1 6 3.820 4.270 99.800 0.085 0.085 8.900 6.200 ? ? ? ? ? ? 1 7 4.270 4.930 99.900 0.056 0.056 13.000 6.100 ? ? ? ? ? ? 1 8 4.930 6.040 99.800 0.058 0.058 12.600 5.900 ? ? ? ? ? ? 1 9 6.040 8.540 99.600 0.050 0.050 14.700 5.700 ? ? ? ? ? ? 1 10 8.540 43.024 98.400 0.029 0.029 19.000 4.900 ? ? ? ? ? ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4LIU _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 31369 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.01 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 43.024 _refine.ls_d_res_high 2.700 _refine.ls_percent_reflns_obs 99.50 _refine.ls_R_factor_obs 0.1986 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1966 _refine.ls_R_factor_R_free 0.2373 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.07 _refine.ls_number_reflns_R_free 1590 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 0.490 _refine.occupancy_max 1.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 40.9965 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.37 _refine.pdbx_overall_phase_error 23.74 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2875 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 16 _refine_hist.number_atoms_solvent 113 _refine_hist.number_atoms_total 3004 _refine_hist.d_res_high 2.700 _refine_hist.d_res_low 43.024 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.003 ? ? 2989 'X-RAY DIFFRACTION' ? f_angle_d 0.807 ? ? 4074 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 15.200 ? ? 1099 'X-RAY DIFFRACTION' ? f_chiral_restr 0.060 ? ? 417 'X-RAY DIFFRACTION' ? f_plane_restr 0.003 ? ? 545 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.7000 2.7872 2690 0.2948 99.00 0.3857 . . 162 . . . . 'X-RAY DIFFRACTION' . 2.7872 2.8868 2709 0.2753 100.00 0.3245 . . 163 . . . . 'X-RAY DIFFRACTION' . 2.8868 3.0023 2693 0.2700 100.00 0.2944 . . 140 . . . . 'X-RAY DIFFRACTION' . 3.0023 3.1389 2711 0.2622 100.00 0.3033 . . 174 . . . . 'X-RAY DIFFRACTION' . 3.1389 3.3043 2717 0.2173 100.00 0.2408 . . 131 . . . . 'X-RAY DIFFRACTION' . 3.3043 3.5113 2696 0.1921 100.00 0.2194 . . 142 . . . . 'X-RAY DIFFRACTION' . 3.5113 3.7822 2737 0.1898 100.00 0.2267 . . 147 . . . . 'X-RAY DIFFRACTION' . 3.7822 4.1626 2710 0.1581 100.00 0.2246 . . 136 . . . . 'X-RAY DIFFRACTION' . 4.1626 4.7643 2692 0.1475 100.00 0.1680 . . 154 . . . . 'X-RAY DIFFRACTION' . 4.7643 5.9999 2749 0.1732 99.00 0.2261 . . 100 . . . . 'X-RAY DIFFRACTION' . 5.9999 43.0289 2675 0.1983 98.00 0.2329 . . 141 . . . . # _struct.entry_id 4LIU _struct.title 'Structure of YcfD, a Ribosomal oxygenase from Escherichia coli.' _struct.pdbx_descriptor '50S ribosomal protein L16 arginine hydroxylase (E.C.1.14.11.-)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4LIU _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text 'JmjC Domain, Dioxygenase, Hydroxylation, OXIDOREDUCTASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 42 ? HIS A 50 ? ASN A 42 HIS A 50 1 ? 9 HELX_P HELX_P2 2 SER A 70 ? ALA A 78 ? SER A 70 ALA A 78 1 ? 9 HELX_P HELX_P3 3 ALA A 119 ? TRP A 123 ? ALA A 119 TRP A 123 5 ? 5 HELX_P HELX_P4 4 HIS A 124 ? ALA A 129 ? HIS A 124 ALA A 129 1 ? 6 HELX_P HELX_P5 5 LEU A 130 ? ARG A 135 ? LEU A 130 ARG A 135 5 ? 6 HELX_P HELX_P6 6 ASN A 240 ? ARG A 255 ? ASN A 240 ARG A 255 1 ? 16 HELX_P HELX_P7 7 LEU A 277 ? ASN A 293 ? LEU A 277 ASN A 293 1 ? 17 HELX_P HELX_P8 8 GLN A 294 ? ILE A 306 ? GLN A 294 ILE A 306 1 ? 13 HELX_P HELX_P9 9 GLN A 323 ? GLN A 333 ? GLN A 323 GLN A 333 1 ? 11 HELX_P HELX_P10 10 HIS A 363 ? ASN A 373 ? HIS A 363 ASN A 373 1 ? 11 HELX_P HELX_P11 11 THR A 377 ? GLY A 382 ? THR A 377 GLY A 382 1 ? 6 HELX_P HELX_P12 12 ASP A 383 ? GLU A 386 ? ASP A 383 GLU A 386 5 ? 4 HELX_P HELX_P13 13 ASP A 387 ? SER A 400 ? ASP A 387 SER A 400 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A MSE 35 C ? ? ? 1_555 A GLU 36 N ? ? A MSE 35 A GLU 36 1_555 ? ? ? ? ? ? ? 1.329 ? covale2 covale ? ? A ALA 78 C ? ? ? 1_555 A MSE 79 N ? ? A ALA 78 A MSE 79 1_555 ? ? ? ? ? ? ? 1.329 ? covale3 covale ? ? A MSE 79 C ? ? ? 1_555 A GLU 80 N ? ? A MSE 79 A GLU 80 1_555 ? ? ? ? ? ? ? 1.328 ? covale4 covale ? ? A LEU 130 C ? ? ? 1_555 A MSE 131 N ? ? A LEU 130 A MSE 131 1_555 ? ? ? ? ? ? ? 1.328 ? covale5 covale ? ? A MSE 131 C ? ? ? 1_555 A ARG 132 N ? ? A MSE 131 A ARG 132 1_555 ? ? ? ? ? ? ? 1.328 ? covale6 covale ? ? A LEU 145 C ? ? ? 1_555 A MSE 146 N ? ? A LEU 145 A MSE 146 1_555 ? ? ? ? ? ? ? 1.326 ? covale7 covale ? ? A MSE 146 C ? ? ? 1_555 A ILE 147 N ? ? A MSE 146 A ILE 147 1_555 ? ? ? ? ? ? ? 1.327 ? covale8 covale ? ? A ALA 229 C ? ? ? 1_555 A MSE 230 N ? ? A ALA 229 A MSE 230 1_555 ? ? ? ? ? ? ? 1.330 ? covale9 covale ? ? A MSE 230 C ? ? ? 1_555 A ASN 231 N ? ? A MSE 230 A ASN 231 1_555 ? ? ? ? ? ? ? 1.329 ? covale10 covale ? ? A GLU 280 C ? ? ? 1_555 A MSE 281 N ? ? A GLU 280 A MSE 281 1_555 ? ? ? ? ? ? ? 1.329 ? covale11 covale ? ? A MSE 281 C ? ? ? 1_555 A ASP 282 N ? ? A MSE 281 A ASP 282 1_555 ? ? ? ? ? ? ? 1.327 ? covale12 covale ? ? A GLU 286 C ? ? ? 1_555 A MSE 287 N ? ? A GLU 286 A MSE 287 1_555 ? ? ? ? ? ? ? 1.328 ? covale13 covale ? ? A MSE 287 C ? ? ? 1_555 A MSE 288 N ? ? A MSE 287 A MSE 288 1_555 ? ? ? ? ? ? ? 1.332 ? covale14 covale ? ? A MSE 288 C ? ? ? 1_555 A LEU 289 N ? ? A MSE 288 A LEU 289 1_555 ? ? ? ? ? ? ? 1.332 ? covale15 covale ? ? A ALA 392 C ? ? ? 1_555 A MSE 393 N ? ? A ALA 392 A MSE 393 1_555 ? ? ? ? ? ? ? 1.331 ? covale16 covale ? ? A MSE 393 C ? ? ? 1_555 A LEU 394 N ? ? A MSE 393 A LEU 394 1_555 ? ? ? ? ? ? ? 1.330 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 100 A . ? GLY 100 A PRO 101 A ? PRO 101 A 1 2.23 2 GLU 319 A . ? GLU 319 A PRO 320 A ? PRO 320 A 1 2.31 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 3 ? C ? 3 ? D ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 56 ? LEU A 58 ? VAL A 56 LEU A 58 A 2 ILE A 212 ? ILE A 215 ? ILE A 212 ILE A 215 A 3 VAL A 165 ? GLN A 169 ? VAL A 165 GLN A 169 A 4 ALA A 229 ? PHE A 236 ? ALA A 229 PHE A 236 A 5 ILE A 142 ? SER A 150 ? ILE A 142 SER A 150 A 6 TRP A 113 ? VAL A 117 ? TRP A 113 VAL A 117 A 7 SER A 85 ? GLN A 91 ? SER A 85 GLN A 91 A 8 LYS A 94 ? HIS A 99 ? LYS A 94 HIS A 99 B 1 ALA A 201 ? LEU A 207 ? ALA A 201 LEU A 207 B 2 ARG A 173 ? GLY A 179 ? ARG A 173 GLY A 179 B 3 HIS A 221 ? GLU A 227 ? HIS A 221 GLU A 227 C 1 ALA A 375 ? LEU A 376 ? ALA A 375 LEU A 376 C 2 LEU A 337 ? ARG A 339 ? LEU A 337 ARG A 339 C 3 TRP A 403 ? PHE A 405 ? TRP A 403 PHE A 405 D 1 VAL A 345 ? ILE A 348 ? VAL A 345 ILE A 348 D 2 ASP A 351 ? ALA A 354 ? ASP A 351 ALA A 354 D 3 GLU A 357 ? ILE A 359 ? GLU A 357 ILE A 359 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 58 ? N LEU A 58 O ILE A 212 ? O ILE A 212 A 2 3 O LEU A 213 ? O LEU A 213 N ILE A 167 ? N ILE A 167 A 3 4 N PHE A 166 ? N PHE A 166 O VAL A 234 ? O VAL A 234 A 4 5 O ALA A 229 ? O ALA A 229 N SER A 150 ? N SER A 150 A 5 6 O ILE A 147 ? O ILE A 147 N VAL A 117 ? N VAL A 117 A 6 7 O LEU A 116 ? O LEU A 116 N ARG A 86 ? N ARG A 86 A 7 8 N LEU A 87 ? N LEU A 87 O SER A 98 ? O SER A 98 B 1 2 O ILE A 202 ? O ILE A 202 N VAL A 178 ? N VAL A 178 B 2 3 N ARG A 173 ? N ARG A 173 O LEU A 226 ? O LEU A 226 C 1 2 O LEU A 376 ? O LEU A 376 N LEU A 337 ? N LEU A 337 C 2 3 N VAL A 338 ? N VAL A 338 O PHE A 404 ? O PHE A 404 D 1 2 N LEU A 346 ? N LEU A 346 O TYR A 353 ? O TYR A 353 D 2 3 N VAL A 352 ? N VAL A 352 O ILE A 359 ? O ILE A 359 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE TAM A 501' AC2 Software ? ? ? ? 10 'BINDING SITE FOR RESIDUE PO4 A 502' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 LEU A 41 ? LEU A 41 . ? 6_545 ? 2 AC1 5 ASN A 42 ? ASN A 42 . ? 6_545 ? 3 AC1 5 ASP A 45 ? ASP A 45 . ? 6_545 ? 4 AC1 5 GLY A 407 ? GLY A 407 . ? 1_555 ? 5 AC1 5 HOH D . ? HOH A 704 . ? 1_555 ? 6 AC2 10 LEU A 116 ? LEU A 116 . ? 1_555 ? 7 AC2 10 MSE A 146 ? MSE A 146 . ? 1_555 ? 8 AC2 10 SER A 148 ? SER A 148 . ? 1_555 ? 9 AC2 10 ARG A 174 ? ARG A 174 . ? 1_555 ? 10 AC2 10 TRP A 176 ? TRP A 176 . ? 1_555 ? 11 AC2 10 HOH D . ? HOH A 607 . ? 1_555 ? 12 AC2 10 HOH D . ? HOH A 613 . ? 1_555 ? 13 AC2 10 HOH D . ? HOH A 671 . ? 1_555 ? 14 AC2 10 HOH D . ? HOH A 678 . ? 1_555 ? 15 AC2 10 HOH D . ? HOH A 708 . ? 1_555 ? # _atom_sites.entry_id 4LIU _atom_sites.fract_transf_matrix[1][1] 0.013314 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013314 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004763 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 ? ? ? A . n A 1 2 GLY 2 2 ? ? ? A . n A 1 3 SER 3 3 ? ? ? A . n A 1 4 SER 4 4 ? ? ? A . n A 1 5 HIS 5 5 ? ? ? A . n A 1 6 HIS 6 6 ? ? ? A . n A 1 7 HIS 7 7 ? ? ? A . n A 1 8 HIS 8 8 ? ? ? A . n A 1 9 HIS 9 9 ? ? ? A . n A 1 10 HIS 10 10 ? ? ? A . n A 1 11 SER 11 11 ? ? ? A . n A 1 12 SER 12 12 ? ? ? A . n A 1 13 GLY 13 13 ? ? ? A . n A 1 14 LEU 14 14 ? ? ? A . n A 1 15 VAL 15 15 ? ? ? A . n A 1 16 PRO 16 16 ? ? ? A . n A 1 17 ARG 17 17 ? ? ? A . n A 1 18 GLY 18 18 ? ? ? A . n A 1 19 SER 19 19 ? ? ? A . n A 1 20 HIS 20 20 ? ? ? A . n A 1 21 MSE 21 21 ? ? ? A . n A 1 22 ALA 22 22 ? ? ? A . n A 1 23 SER 23 23 ? ? ? A . n A 1 24 MSE 24 24 ? ? ? A . n A 1 25 THR 25 25 ? ? ? A . n A 1 26 GLY 26 26 ? ? ? A . n A 1 27 GLY 27 27 ? ? ? A . n A 1 28 GLU 28 28 ? ? ? A . n A 1 29 GLU 29 29 ? ? ? A . n A 1 30 MSE 30 30 ? ? ? A . n A 1 31 GLY 31 31 ? ? ? A . n A 1 32 ARG 32 32 ? ? ? A . n A 1 33 GLY 33 33 ? ? ? A . n A 1 34 SER 34 34 ? ? ? A . n A 1 35 MSE 35 35 35 MSE MSE A . n A 1 36 GLU 36 36 36 GLU GLU A . n A 1 37 TYR 37 37 37 TYR TYR A . n A 1 38 GLN 38 38 38 GLN GLN A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 THR 40 40 40 THR THR A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 ASN 42 42 42 ASN ASN A . n A 1 43 TRP 43 43 43 TRP TRP A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 ASP 45 45 45 ASP ASP A . n A 1 46 PHE 46 46 46 PHE PHE A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 ARG 49 49 49 ARG ARG A . n A 1 50 HIS 50 50 50 HIS HIS A . n A 1 51 TRP 51 51 51 TRP TRP A . n A 1 52 GLN 52 52 52 GLN GLN A . n A 1 53 LYS 53 53 53 LYS LYS A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 LYS 59 59 59 LYS LYS A . n A 1 60 ARG 60 60 60 ARG ARG A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 PHE 62 62 62 PHE PHE A . n A 1 63 ASN 63 63 63 ASN ASN A . n A 1 64 ASN 64 64 64 ASN ASN A . n A 1 65 PHE 65 65 65 PHE PHE A . n A 1 66 ILE 66 66 66 ILE ILE A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 PRO 68 68 68 PRO PRO A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 SER 70 70 70 SER SER A . n A 1 71 PRO 71 71 71 PRO PRO A . n A 1 72 ASP 72 72 72 ASP ASP A . n A 1 73 GLU 73 73 73 GLU GLU A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 GLY 76 76 76 GLY GLY A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 MSE 79 79 79 MSE MSE A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 ASP 84 84 84 ASP ASP A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 ARG 86 86 86 ARG ARG A . n A 1 87 LEU 87 87 87 LEU LEU A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 SER 89 89 89 SER SER A . n A 1 90 HIS 90 90 90 HIS HIS A . n A 1 91 GLN 91 91 91 GLN GLN A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 GLY 93 93 93 GLY GLY A . n A 1 94 LYS 94 94 94 LYS LYS A . n A 1 95 TRP 95 95 95 TRP TRP A . n A 1 96 GLN 96 96 96 GLN GLN A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 SER 98 98 98 SER SER A . n A 1 99 HIS 99 99 99 HIS HIS A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 PRO 101 101 101 PRO PRO A . n A 1 102 PHE 102 102 102 PHE PHE A . n A 1 103 GLU 103 103 103 GLU GLU A . n A 1 104 SER 104 104 104 SER SER A . n A 1 105 TYR 105 105 105 TYR TYR A . n A 1 106 ASP 106 106 106 ASP ASP A . n A 1 107 HIS 107 107 107 HIS HIS A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 GLY 109 109 109 GLY GLY A . n A 1 110 GLU 110 110 110 GLU GLU A . n A 1 111 THR 111 111 111 THR THR A . n A 1 112 ASN 112 112 112 ASN ASN A . n A 1 113 TRP 113 113 113 TRP TRP A . n A 1 114 SER 114 114 114 SER SER A . n A 1 115 LEU 115 115 115 LEU LEU A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 VAL 117 117 117 VAL VAL A . n A 1 118 GLN 118 118 118 GLN GLN A . n A 1 119 ALA 119 119 119 ALA ALA A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 ASN 121 121 121 ASN ASN A . n A 1 122 HIS 122 122 122 HIS HIS A . n A 1 123 TRP 123 123 123 TRP TRP A . n A 1 124 HIS 124 124 124 HIS HIS A . n A 1 125 GLU 125 125 125 GLU GLU A . n A 1 126 PRO 126 126 126 PRO PRO A . n A 1 127 THR 127 127 127 THR THR A . n A 1 128 ALA 128 128 128 ALA ALA A . n A 1 129 ALA 129 129 129 ALA ALA A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 MSE 131 131 131 MSE MSE A . n A 1 132 ARG 132 132 132 ARG ARG A . n A 1 133 PRO 133 133 133 PRO PRO A . n A 1 134 PHE 134 134 134 PHE PHE A . n A 1 135 ARG 135 135 135 ARG ARG A . n A 1 136 GLU 136 136 136 GLU GLU A . n A 1 137 LEU 137 137 137 LEU LEU A . n A 1 138 PRO 138 138 138 PRO PRO A . n A 1 139 ASP 139 139 139 ASP ASP A . n A 1 140 TRP 140 140 140 TRP TRP A . n A 1 141 ARG 141 141 141 ARG ARG A . n A 1 142 ILE 142 142 142 ILE ILE A . n A 1 143 ASP 143 143 143 ASP ASP A . n A 1 144 ASP 144 144 144 ASP ASP A . n A 1 145 LEU 145 145 145 LEU LEU A . n A 1 146 MSE 146 146 146 MSE MSE A . n A 1 147 ILE 147 147 147 ILE ILE A . n A 1 148 SER 148 148 148 SER SER A . n A 1 149 PHE 149 149 149 PHE PHE A . n A 1 150 SER 150 150 150 SER SER A . n A 1 151 VAL 151 151 151 VAL VAL A . n A 1 152 PRO 152 152 152 PRO PRO A . n A 1 153 GLY 153 153 153 GLY GLY A . n A 1 154 GLY 154 154 154 GLY GLY A . n A 1 155 GLY 155 155 155 GLY GLY A . n A 1 156 VAL 156 156 156 VAL VAL A . n A 1 157 GLY 157 157 157 GLY GLY A . n A 1 158 PRO 158 158 158 PRO PRO A . n A 1 159 HIS 159 159 159 HIS HIS A . n A 1 160 LEU 160 160 160 LEU LEU A . n A 1 161 ASP 161 161 161 ASP ASP A . n A 1 162 GLN 162 162 162 GLN GLN A . n A 1 163 TYR 163 163 163 TYR TYR A . n A 1 164 ASP 164 164 164 ASP ASP A . n A 1 165 VAL 165 165 165 VAL VAL A . n A 1 166 PHE 166 166 166 PHE PHE A . n A 1 167 ILE 167 167 167 ILE ILE A . n A 1 168 ILE 168 168 168 ILE ILE A . n A 1 169 GLN 169 169 169 GLN GLN A . n A 1 170 GLY 170 170 170 GLY GLY A . n A 1 171 THR 171 171 171 THR THR A . n A 1 172 GLY 172 172 172 GLY GLY A . n A 1 173 ARG 173 173 173 ARG ARG A . n A 1 174 ARG 174 174 174 ARG ARG A . n A 1 175 ARG 175 175 175 ARG ARG A . n A 1 176 TRP 176 176 176 TRP TRP A . n A 1 177 ARG 177 177 177 ARG ARG A . n A 1 178 VAL 178 178 178 VAL VAL A . n A 1 179 GLY 179 179 179 GLY GLY A . n A 1 180 GLU 180 180 180 GLU GLU A . n A 1 181 LYS 181 181 181 LYS LYS A . n A 1 182 LEU 182 182 182 LEU LEU A . n A 1 183 GLN 183 183 ? ? ? A . n A 1 184 MSE 184 184 ? ? ? A . n A 1 185 LYS 185 185 ? ? ? A . n A 1 186 GLN 186 186 ? ? ? A . n A 1 187 HIS 187 187 ? ? ? A . n A 1 188 CYS 188 188 ? ? ? A . n A 1 189 PRO 189 189 ? ? ? A . n A 1 190 HIS 190 190 ? ? ? A . n A 1 191 PRO 191 191 ? ? ? A . n A 1 192 ASP 192 192 ? ? ? A . n A 1 193 LEU 193 193 ? ? ? A . n A 1 194 LEU 194 194 ? ? ? A . n A 1 195 GLN 195 195 ? ? ? A . n A 1 196 VAL 196 196 196 VAL VAL A . n A 1 197 ASP 197 197 197 ASP ASP A . n A 1 198 PRO 198 198 198 PRO PRO A . n A 1 199 PHE 199 199 199 PHE PHE A . n A 1 200 GLU 200 200 200 GLU GLU A . n A 1 201 ALA 201 201 201 ALA ALA A . n A 1 202 ILE 202 202 202 ILE ILE A . n A 1 203 ILE 203 203 203 ILE ILE A . n A 1 204 ASP 204 204 204 ASP ASP A . n A 1 205 GLU 205 205 205 GLU GLU A . n A 1 206 GLU 206 206 206 GLU GLU A . n A 1 207 LEU 207 207 207 LEU LEU A . n A 1 208 GLU 208 208 208 GLU GLU A . n A 1 209 PRO 209 209 209 PRO PRO A . n A 1 210 GLY 210 210 210 GLY GLY A . n A 1 211 ASP 211 211 211 ASP ASP A . n A 1 212 ILE 212 212 212 ILE ILE A . n A 1 213 LEU 213 213 213 LEU LEU A . n A 1 214 TYR 214 214 214 TYR TYR A . n A 1 215 ILE 215 215 215 ILE ILE A . n A 1 216 PRO 216 216 216 PRO PRO A . n A 1 217 PRO 217 217 217 PRO PRO A . n A 1 218 GLY 218 218 218 GLY GLY A . n A 1 219 PHE 219 219 219 PHE PHE A . n A 1 220 PRO 220 220 220 PRO PRO A . n A 1 221 HIS 221 221 221 HIS HIS A . n A 1 222 GLU 222 222 222 GLU GLU A . n A 1 223 GLY 223 223 223 GLY GLY A . n A 1 224 TYR 224 224 224 TYR TYR A . n A 1 225 ALA 225 225 225 ALA ALA A . n A 1 226 LEU 226 226 226 LEU LEU A . n A 1 227 GLU 227 227 227 GLU GLU A . n A 1 228 ASN 228 228 228 ASN ASN A . n A 1 229 ALA 229 229 229 ALA ALA A . n A 1 230 MSE 230 230 230 MSE MSE A . n A 1 231 ASN 231 231 231 ASN ASN A . n A 1 232 TYR 232 232 232 TYR TYR A . n A 1 233 SER 233 233 233 SER SER A . n A 1 234 VAL 234 234 234 VAL VAL A . n A 1 235 GLY 235 235 235 GLY GLY A . n A 1 236 PHE 236 236 236 PHE PHE A . n A 1 237 ARG 237 237 237 ARG ARG A . n A 1 238 ALA 238 238 238 ALA ALA A . n A 1 239 PRO 239 239 239 PRO PRO A . n A 1 240 ASN 240 240 240 ASN ASN A . n A 1 241 THR 241 241 241 THR THR A . n A 1 242 ARG 242 242 242 ARG ARG A . n A 1 243 GLU 243 243 243 GLU GLU A . n A 1 244 LEU 244 244 244 LEU LEU A . n A 1 245 ILE 245 245 245 ILE ILE A . n A 1 246 SER 246 246 246 SER SER A . n A 1 247 GLY 247 247 247 GLY GLY A . n A 1 248 PHE 248 248 248 PHE PHE A . n A 1 249 ALA 249 249 249 ALA ALA A . n A 1 250 ASP 250 250 250 ASP ASP A . n A 1 251 TYR 251 251 251 TYR TYR A . n A 1 252 VAL 252 252 252 VAL VAL A . n A 1 253 LEU 253 253 253 LEU LEU A . n A 1 254 GLN 254 254 254 GLN GLN A . n A 1 255 ARG 255 255 255 ARG ARG A . n A 1 256 GLU 256 256 256 GLU GLU A . n A 1 257 LEU 257 257 257 LEU LEU A . n A 1 258 GLY 258 258 258 GLY GLY A . n A 1 259 GLY 259 259 259 GLY GLY A . n A 1 260 ASN 260 260 260 ASN ASN A . n A 1 261 TYR 261 261 261 TYR TYR A . n A 1 262 TYR 262 262 262 TYR TYR A . n A 1 263 SER 263 263 263 SER SER A . n A 1 264 ASP 264 264 264 ASP ASP A . n A 1 265 PRO 265 265 265 PRO PRO A . n A 1 266 ASP 266 266 266 ASP ASP A . n A 1 267 VAL 267 267 267 VAL VAL A . n A 1 268 PRO 268 268 268 PRO PRO A . n A 1 269 PRO 269 269 269 PRO PRO A . n A 1 270 ARG 270 270 270 ARG ARG A . n A 1 271 ALA 271 271 271 ALA ALA A . n A 1 272 HIS 272 272 272 HIS HIS A . n A 1 273 PRO 273 273 273 PRO PRO A . n A 1 274 ALA 274 274 274 ALA ALA A . n A 1 275 ASP 275 275 275 ASP ASP A . n A 1 276 VAL 276 276 276 VAL VAL A . n A 1 277 LEU 277 277 277 LEU LEU A . n A 1 278 PRO 278 278 278 PRO PRO A . n A 1 279 GLN 279 279 279 GLN GLN A . n A 1 280 GLU 280 280 280 GLU GLU A . n A 1 281 MSE 281 281 281 MSE MSE A . n A 1 282 ASP 282 282 282 ASP ASP A . n A 1 283 LYS 283 283 283 LYS LYS A . n A 1 284 LEU 284 284 284 LEU LEU A . n A 1 285 ARG 285 285 285 ARG ARG A . n A 1 286 GLU 286 286 286 GLU GLU A . n A 1 287 MSE 287 287 287 MSE MSE A . n A 1 288 MSE 288 288 288 MSE MSE A . n A 1 289 LEU 289 289 289 LEU LEU A . n A 1 290 GLU 290 290 290 GLU GLU A . n A 1 291 LEU 291 291 291 LEU LEU A . n A 1 292 ILE 292 292 292 ILE ILE A . n A 1 293 ASN 293 293 293 ASN ASN A . n A 1 294 GLN 294 294 294 GLN GLN A . n A 1 295 PRO 295 295 295 PRO PRO A . n A 1 296 GLU 296 296 296 GLU GLU A . n A 1 297 HIS 297 297 297 HIS HIS A . n A 1 298 PHE 298 298 298 PHE PHE A . n A 1 299 LYS 299 299 299 LYS LYS A . n A 1 300 GLN 300 300 300 GLN GLN A . n A 1 301 TRP 301 301 301 TRP TRP A . n A 1 302 PHE 302 302 302 PHE PHE A . n A 1 303 GLY 303 303 303 GLY GLY A . n A 1 304 GLU 304 304 304 GLU GLU A . n A 1 305 PHE 305 305 305 PHE PHE A . n A 1 306 ILE 306 306 306 ILE ILE A . n A 1 307 SER 307 307 307 SER SER A . n A 1 308 GLN 308 308 308 GLN GLN A . n A 1 309 SER 309 309 309 SER SER A . n A 1 310 ARG 310 310 310 ARG ARG A . n A 1 311 HIS 311 311 311 HIS HIS A . n A 1 312 GLU 312 312 312 GLU GLU A . n A 1 313 LEU 313 313 313 LEU LEU A . n A 1 314 ASP 314 314 314 ASP ASP A . n A 1 315 ILE 315 315 315 ILE ILE A . n A 1 316 ALA 316 316 316 ALA ALA A . n A 1 317 PRO 317 317 317 PRO PRO A . n A 1 318 PRO 318 318 318 PRO PRO A . n A 1 319 GLU 319 319 319 GLU GLU A . n A 1 320 PRO 320 320 320 PRO PRO A . n A 1 321 PRO 321 321 321 PRO PRO A . n A 1 322 TYR 322 322 322 TYR TYR A . n A 1 323 GLN 323 323 323 GLN GLN A . n A 1 324 PRO 324 324 324 PRO PRO A . n A 1 325 ASP 325 325 325 ASP ASP A . n A 1 326 GLU 326 326 326 GLU GLU A . n A 1 327 ILE 327 327 327 ILE ILE A . n A 1 328 TYR 328 328 328 TYR TYR A . n A 1 329 ASP 329 329 329 ASP ASP A . n A 1 330 ALA 330 330 330 ALA ALA A . n A 1 331 LEU 331 331 331 LEU LEU A . n A 1 332 LYS 332 332 332 LYS LYS A . n A 1 333 GLN 333 333 333 GLN GLN A . n A 1 334 GLY 334 334 334 GLY GLY A . n A 1 335 GLU 335 335 335 GLU GLU A . n A 1 336 VAL 336 336 336 VAL VAL A . n A 1 337 LEU 337 337 337 LEU LEU A . n A 1 338 VAL 338 338 338 VAL VAL A . n A 1 339 ARG 339 339 339 ARG ARG A . n A 1 340 LEU 340 340 340 LEU LEU A . n A 1 341 GLY 341 341 341 GLY GLY A . n A 1 342 GLY 342 342 342 GLY GLY A . n A 1 343 LEU 343 343 343 LEU LEU A . n A 1 344 ARG 344 344 344 ARG ARG A . n A 1 345 VAL 345 345 345 VAL VAL A . n A 1 346 LEU 346 346 346 LEU LEU A . n A 1 347 ARG 347 347 347 ARG ARG A . n A 1 348 ILE 348 348 348 ILE ILE A . n A 1 349 GLY 349 349 349 GLY GLY A . n A 1 350 ASP 350 350 350 ASP ASP A . n A 1 351 ASP 351 351 351 ASP ASP A . n A 1 352 VAL 352 352 352 VAL VAL A . n A 1 353 TYR 353 353 353 TYR TYR A . n A 1 354 ALA 354 354 354 ALA ALA A . n A 1 355 ASN 355 355 355 ASN ASN A . n A 1 356 GLY 356 356 356 GLY GLY A . n A 1 357 GLU 357 357 357 GLU GLU A . n A 1 358 LYS 358 358 358 LYS LYS A . n A 1 359 ILE 359 359 359 ILE ILE A . n A 1 360 ASP 360 360 360 ASP ASP A . n A 1 361 SER 361 361 361 SER SER A . n A 1 362 PRO 362 362 362 PRO PRO A . n A 1 363 HIS 363 363 363 HIS HIS A . n A 1 364 ARG 364 364 364 ARG ARG A . n A 1 365 PRO 365 365 365 PRO PRO A . n A 1 366 ALA 366 366 366 ALA ALA A . n A 1 367 LEU 367 367 367 LEU LEU A . n A 1 368 ASP 368 368 368 ASP ASP A . n A 1 369 ALA 369 369 369 ALA ALA A . n A 1 370 LEU 370 370 370 LEU LEU A . n A 1 371 ALA 371 371 371 ALA ALA A . n A 1 372 SER 372 372 372 SER SER A . n A 1 373 ASN 373 373 373 ASN ASN A . n A 1 374 ILE 374 374 374 ILE ILE A . n A 1 375 ALA 375 375 375 ALA ALA A . n A 1 376 LEU 376 376 376 LEU LEU A . n A 1 377 THR 377 377 377 THR THR A . n A 1 378 ALA 378 378 378 ALA ALA A . n A 1 379 GLU 379 379 379 GLU GLU A . n A 1 380 ASN 380 380 380 ASN ASN A . n A 1 381 PHE 381 381 381 PHE PHE A . n A 1 382 GLY 382 382 382 GLY GLY A . n A 1 383 ASP 383 383 383 ASP ASP A . n A 1 384 ALA 384 384 384 ALA ALA A . n A 1 385 LEU 385 385 385 LEU LEU A . n A 1 386 GLU 386 386 386 GLU GLU A . n A 1 387 ASP 387 387 387 ASP ASP A . n A 1 388 PRO 388 388 388 PRO PRO A . n A 1 389 SER 389 389 389 SER SER A . n A 1 390 PHE 390 390 390 PHE PHE A . n A 1 391 LEU 391 391 391 LEU LEU A . n A 1 392 ALA 392 392 392 ALA ALA A . n A 1 393 MSE 393 393 393 MSE MSE A . n A 1 394 LEU 394 394 394 LEU LEU A . n A 1 395 ALA 395 395 395 ALA ALA A . n A 1 396 ALA 396 396 396 ALA ALA A . n A 1 397 LEU 397 397 397 LEU LEU A . n A 1 398 VAL 398 398 398 VAL VAL A . n A 1 399 ASN 399 399 399 ASN ASN A . n A 1 400 SER 400 400 400 SER SER A . n A 1 401 GLY 401 401 401 GLY GLY A . n A 1 402 TYR 402 402 402 TYR TYR A . n A 1 403 TRP 403 403 403 TRP TRP A . n A 1 404 PHE 404 404 404 PHE PHE A . n A 1 405 PHE 405 405 405 PHE PHE A . n A 1 406 GLU 406 406 406 GLU GLU A . n A 1 407 GLY 407 407 407 GLY GLY A . n # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 35 A MSE 35 ? MET SELENOMETHIONINE 2 A MSE 79 A MSE 79 ? MET SELENOMETHIONINE 3 A MSE 131 A MSE 131 ? MET SELENOMETHIONINE 4 A MSE 146 A MSE 146 ? MET SELENOMETHIONINE 5 A MSE 230 A MSE 230 ? MET SELENOMETHIONINE 6 A MSE 281 A MSE 281 ? MET SELENOMETHIONINE 7 A MSE 287 A MSE 287 ? MET SELENOMETHIONINE 8 A MSE 288 A MSE 288 ? MET SELENOMETHIONINE 9 A MSE 393 A MSE 393 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6930 ? 1 MORE -60 ? 1 'SSA (A^2)' 31470 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-05-14 2 'Structure model' 1 1 2014-06-25 3 'Structure model' 1 2 2014-07-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 2.700 _diffrn_reflns.pdbx_d_res_low 70.721 _diffrn_reflns.pdbx_number_obs 17365 _diffrn_reflns.pdbx_Rmerge_I_obs ? _diffrn_reflns.pdbx_Rsym_value 0.142 _diffrn_reflns.pdbx_chi_squared ? _diffrn_reflns.av_sigmaI_over_netI 5.20 _diffrn_reflns.pdbx_redundancy 6.10 _diffrn_reflns.pdbx_percent_possible_obs 99.90 _diffrn_reflns.number 106655 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 8.54 43.02 ? ? 0.029 0.029 ? 4.90 98.40 1 6.04 8.54 ? ? 0.050 0.050 ? 5.70 99.60 1 4.93 6.04 ? ? 0.058 0.058 ? 5.90 99.80 1 4.27 4.93 ? ? 0.056 0.056 ? 6.10 99.90 1 3.82 4.27 ? ? 0.085 0.085 ? 6.20 99.80 1 3.49 3.82 ? ? 0.148 0.148 ? 6.20 99.90 1 3.23 3.49 ? ? 0.218 0.218 ? 6.30 100.00 1 3.02 3.23 ? ? 0.381 0.381 ? 6.30 100.00 1 2.85 3.02 ? ? 0.601 0.601 ? 6.30 100.00 1 2.70 2.85 ? ? 0.872 0.872 ? 6.30 100.00 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 22.2184 -18.4180 31.1742 0.4220 0.6123 0.5195 0.2808 -0.0227 -0.0357 8.4649 6.4569 8.0058 4.8263 -2.9061 3.4402 0.5197 -0.0361 -1.5878 0.4629 0.4337 -1.5751 0.6950 1.3202 -0.3373 'X-RAY DIFFRACTION' 2 ? refined 6.8780 -16.1279 32.7988 0.2137 0.2149 0.2479 -0.0176 0.0318 -0.0121 2.0525 1.8297 3.6234 1.6540 -0.0359 0.3710 -0.1184 -0.1040 -0.5186 -0.0773 0.1213 -0.1254 0.4798 -0.3276 -0.0097 'X-RAY DIFFRACTION' 3 ? refined 22.8528 6.7613 30.4907 0.4289 0.4068 0.3214 -0.1473 -0.0006 -0.0056 3.9507 4.3546 5.8428 -0.3216 -1.5133 0.7294 0.2987 -0.0161 0.5722 -0.7135 0.2688 -0.4286 -1.2040 0.2107 -0.3747 'X-RAY DIFFRACTION' 4 ? refined 21.2648 -2.7954 27.3533 0.2950 0.3331 0.2832 -0.0639 0.0458 -0.0288 2.7482 1.0759 3.3930 -0.8239 -0.2051 1.2178 0.1544 0.1338 -0.0031 -0.2190 0.3220 -0.7118 -0.4395 0.5838 -0.2975 'X-RAY DIFFRACTION' 5 ? refined 9.7747 -2.3931 34.2245 0.2371 0.2115 0.2064 0.0148 0.0193 0.0028 2.6185 3.0854 3.8299 0.2839 0.2857 0.8033 0.2355 -0.1202 0.2226 0.0909 -0.1036 0.1016 -0.4809 0.0003 -0.0758 'X-RAY DIFFRACTION' 6 ? refined -5.9257 0.4290 -7.0225 0.3184 0.2505 0.2587 0.0395 0.0362 0.0552 2.5272 1.6971 4.0146 -1.9131 2.5990 -1.2706 0.1498 -0.1044 0.1086 -0.0623 -0.0203 -0.0209 0.3718 0.1514 -0.1460 'X-RAY DIFFRACTION' 7 ? refined 8.3666 -8.1959 3.0710 0.5192 0.5855 0.3153 0.2390 0.0292 0.1007 6.6771 2.4221 2.0928 -2.2660 3.4256 -1.9138 0.4664 1.0505 -0.2876 -0.6465 -0.2064 -0.1092 0.7230 0.7256 -0.1914 'X-RAY DIFFRACTION' 8 ? refined 27.5488 -14.2774 7.4129 0.2050 0.2785 0.2416 0.0539 0.0445 0.0069 3.0369 2.4343 3.0410 -2.1228 -0.6645 -0.3080 0.2498 0.2143 0.2593 -0.2313 -0.1207 -0.1689 -0.1978 -0.1323 -0.1569 'X-RAY DIFFRACTION' 9 ? refined 27.1664 -20.6002 6.3548 0.2019 0.3240 0.2335 0.0405 0.0176 -0.0186 2.9065 4.4259 2.0396 -1.1196 -0.9207 0.1359 0.0248 0.0006 -0.2149 -0.0378 -0.1122 0.2876 0.1875 -0.0155 0.0912 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? '(chain A and resid 35:39)' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? '(chain A and resid 40:66)' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? '(chain A and resid 67:99)' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? '(chain A and resid 100:140)' 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? '(chain A and resid 141:237)' 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? '(chain A and resid 238:290)' 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? '(chain A and resid 291:310)' 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? '(chain A and resid 311:360)' 'X-RAY DIFFRACTION' 9 9 ? ? ? ? ? ? ? ? ? '(chain A and resid 361:407)' # loop_ _pdbx_phasing_MAD_set.id _pdbx_phasing_MAD_set.d_res_low _pdbx_phasing_MAD_set.d_res_high _pdbx_phasing_MAD_set.reflns_acentric _pdbx_phasing_MAD_set.reflns_centric _pdbx_phasing_MAD_set.R_cullis_acentric _pdbx_phasing_MAD_set.R_cullis_centric ISO_1 42.31 2.70 14190 3099 0.000 0.000 ANO_1 42.31 2.70 14190 0 0.894 0.000 # loop_ _pdbx_phasing_MAD_set_shell.id _pdbx_phasing_MAD_set_shell.d_res_low _pdbx_phasing_MAD_set_shell.d_res_high _pdbx_phasing_MAD_set_shell.reflns_acentric _pdbx_phasing_MAD_set_shell.reflns_centric _pdbx_phasing_MAD_set_shell.R_cullis_acentric _pdbx_phasing_MAD_set_shell.R_cullis_centric ISO_1 42.31 11.63 120 143 0.000 0.000 ISO_1 11.63 8.39 249 148 0.000 0.000 ISO_1 8.39 6.89 345 155 0.000 0.000 ISO_1 6.89 5.99 418 151 0.000 0.000 ISO_1 5.99 5.37 482 151 0.000 0.000 ISO_1 5.37 4.91 548 159 0.000 0.000 ISO_1 4.91 4.55 594 155 0.000 0.000 ISO_1 4.55 4.26 643 158 0.000 0.000 ISO_1 4.26 4.01 691 156 0.000 0.000 ISO_1 4.01 3.81 732 145 0.000 0.000 ISO_1 3.81 3.63 777 165 0.000 0.000 ISO_1 3.63 3.48 819 157 0.000 0.000 ISO_1 3.48 3.35 854 154 0.000 0.000 ISO_1 3.35 3.22 874 160 0.000 0.000 ISO_1 3.22 3.12 923 154 0.000 0.000 ISO_1 3.12 3.02 959 154 0.000 0.000 ISO_1 3.02 2.93 1005 164 0.000 0.000 ISO_1 2.93 2.85 1020 154 0.000 0.000 ISO_1 2.85 2.77 1045 162 0.000 0.000 ISO_1 2.77 2.70 1092 154 0.000 0.000 ANO_1 42.31 11.63 120 0 0.336 0.000 ANO_1 11.63 8.39 249 0 0.320 0.000 ANO_1 8.39 6.89 345 0 0.398 0.000 ANO_1 6.89 5.99 418 0 0.470 0.000 ANO_1 5.99 5.37 482 0 0.629 0.000 ANO_1 5.37 4.91 548 0 0.631 0.000 ANO_1 4.91 4.55 594 0 0.710 0.000 ANO_1 4.55 4.26 643 0 0.789 0.000 ANO_1 4.26 4.01 691 0 0.835 0.000 ANO_1 4.01 3.81 732 0 0.892 0.000 ANO_1 3.81 3.63 777 0 0.906 0.000 ANO_1 3.63 3.48 819 0 0.949 0.000 ANO_1 3.48 3.35 854 0 0.959 0.000 ANO_1 3.35 3.22 874 0 0.968 0.000 ANO_1 3.22 3.12 923 0 0.981 0.000 ANO_1 3.12 3.02 959 0 0.993 0.000 ANO_1 3.02 2.93 1005 0 0.993 0.000 ANO_1 2.93 2.85 1020 0 0.998 0.000 ANO_1 2.85 2.77 1045 0 1.001 0.000 ANO_1 2.77 2.70 1092 0 1.007 0.000 # loop_ _pdbx_phasing_MAD_set_site.id _pdbx_phasing_MAD_set_site.atom_type_symbol _pdbx_phasing_MAD_set_site.Cartn_x _pdbx_phasing_MAD_set_site.Cartn_y _pdbx_phasing_MAD_set_site.Cartn_z _pdbx_phasing_MAD_set_site.occupancy _pdbx_phasing_MAD_set_site.b_iso 1 SE -61.238 -39.547 -17.060 0.25 52.54 2 SE -55.873 -47.422 -29.466 0.24 66.91 3 SE -38.127 -43.394 -48.366 0.23 63.18 4 SE -57.022 -24.055 -1.988 0.22 69.97 5 SE -73.244 -68.912 -11.569 0.18 51.12 6 SE -5.460 -61.238 -5.699 0.24 82.77 7 SE -71.434 -30.030 -23.417 0.18 95.82 8 SE -53.116 -36.736 -24.849 0.15 110.94 9 SE -14.146 -74.363 -25.349 0.08 75.59 # loop_ _pdbx_phasing_MAD_shell.d_res_low _pdbx_phasing_MAD_shell.d_res_high _pdbx_phasing_MAD_shell.reflns_acentric _pdbx_phasing_MAD_shell.fom_acentric _pdbx_phasing_MAD_shell.reflns_centric _pdbx_phasing_MAD_shell.fom_centric 42.31 11.63 120 0.623 143 0.079 11.63 8.39 249 0.597 148 0.092 8.39 6.89 345 0.573 155 0.094 6.89 5.99 418 0.522 151 0.084 5.99 5.37 482 0.458 151 0.094 5.37 4.91 548 0.462 159 0.065 4.91 4.55 594 0.419 155 0.054 4.55 4.26 643 0.370 158 0.050 4.26 4.01 691 0.344 156 0.047 4.01 3.81 732 0.286 145 0.040 3.81 3.63 777 0.260 165 0.040 3.63 3.48 819 0.211 157 0.047 3.48 3.35 854 0.195 154 0.042 3.35 3.22 874 0.154 160 0.041 3.22 3.12 923 0.135 154 0.043 3.12 3.02 959 0.112 154 0.045 3.02 2.93 1005 0.102 164 0.051 2.93 2.85 1020 0.090 154 0.042 2.85 2.77 1045 0.078 162 0.053 2.77 2.70 1092 0.068 154 0.041 # _phasing.method SAD # _phasing_MAD.entry_id 4LIU _phasing_MAD.pdbx_d_res_low 42.310 _phasing_MAD.pdbx_d_res_high 2.700 _phasing_MAD.pdbx_reflns_acentric 14190 _phasing_MAD.pdbx_fom_acentric 0.233 _phasing_MAD.pdbx_reflns_centric 3099 _phasing_MAD.pdbx_fom_centric 0.057 # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MOSFLM . ? package 'Andrew G.W. Leslie' andrew@mrc-lmb.cam.ac.uk 'data reduction' http://www.mrc-lmb.cam.ac.uk/harry/mosflm/ ? ? 2 SCALA 3.3.21 2013/01/04 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 3 SHARP . ? package 'Eric de La Fortelle' sharp-develop@globalphasing.com phasing http://www.globalphasing.com/sharp/ ? ? 4 PHENIX 1.8.2_1309 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 5 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 50 ? ? -133.59 -42.96 2 1 LYS A 53 ? ? -129.58 -59.58 3 1 SER A 104 ? ? -170.09 144.62 4 1 ASP A 106 ? ? -43.05 -71.53 5 1 ASP A 143 ? ? -118.68 -108.66 6 1 ASP A 266 ? ? -106.24 52.70 7 1 GLU A 406 ? ? 64.74 -66.59 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 60 ? CG ? A ARG 60 CG 2 1 Y 1 A ARG 60 ? CD ? A ARG 60 CD 3 1 Y 1 A ARG 60 ? NE ? A ARG 60 NE 4 1 Y 1 A ARG 60 ? CZ ? A ARG 60 CZ 5 1 Y 1 A ARG 60 ? NH1 ? A ARG 60 NH1 6 1 Y 1 A ARG 60 ? NH2 ? A ARG 60 NH2 7 1 Y 1 A GLN 91 ? CG ? A GLN 91 CG 8 1 Y 1 A GLN 91 ? CD ? A GLN 91 CD 9 1 Y 1 A GLN 91 ? OE1 ? A GLN 91 OE1 10 1 Y 1 A GLN 91 ? NE2 ? A GLN 91 NE2 11 1 Y 1 A ASP 92 ? CG ? A ASP 92 CG 12 1 Y 1 A ASP 92 ? OD1 ? A ASP 92 OD1 13 1 Y 1 A ASP 92 ? OD2 ? A ASP 92 OD2 14 1 Y 1 A GLU 103 ? CG ? A GLU 103 CG 15 1 Y 1 A GLU 103 ? CD ? A GLU 103 CD 16 1 Y 1 A GLU 103 ? OE1 ? A GLU 103 OE1 17 1 Y 1 A GLU 103 ? OE2 ? A GLU 103 OE2 18 1 Y 1 A SER 104 ? OG ? A SER 104 OG 19 1 Y 1 A ASP 106 ? CG ? A ASP 106 CG 20 1 Y 1 A ASP 106 ? OD1 ? A ASP 106 OD1 21 1 Y 1 A ASP 106 ? OD2 ? A ASP 106 OD2 22 1 Y 1 A HIS 107 ? CG ? A HIS 107 CG 23 1 Y 1 A HIS 107 ? ND1 ? A HIS 107 ND1 24 1 Y 1 A HIS 107 ? CD2 ? A HIS 107 CD2 25 1 Y 1 A HIS 107 ? CE1 ? A HIS 107 CE1 26 1 Y 1 A HIS 107 ? NE2 ? A HIS 107 NE2 27 1 Y 1 A ASP 197 ? CG ? A ASP 197 CG 28 1 Y 1 A ASP 197 ? OD1 ? A ASP 197 OD1 29 1 Y 1 A ASP 197 ? OD2 ? A ASP 197 OD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 1 ? A MSE 1 2 1 Y 1 A GLY 2 ? A GLY 2 3 1 Y 1 A SER 3 ? A SER 3 4 1 Y 1 A SER 4 ? A SER 4 5 1 Y 1 A HIS 5 ? A HIS 5 6 1 Y 1 A HIS 6 ? A HIS 6 7 1 Y 1 A HIS 7 ? A HIS 7 8 1 Y 1 A HIS 8 ? A HIS 8 9 1 Y 1 A HIS 9 ? A HIS 9 10 1 Y 1 A HIS 10 ? A HIS 10 11 1 Y 1 A SER 11 ? A SER 11 12 1 Y 1 A SER 12 ? A SER 12 13 1 Y 1 A GLY 13 ? A GLY 13 14 1 Y 1 A LEU 14 ? A LEU 14 15 1 Y 1 A VAL 15 ? A VAL 15 16 1 Y 1 A PRO 16 ? A PRO 16 17 1 Y 1 A ARG 17 ? A ARG 17 18 1 Y 1 A GLY 18 ? A GLY 18 19 1 Y 1 A SER 19 ? A SER 19 20 1 Y 1 A HIS 20 ? A HIS 20 21 1 Y 1 A MSE 21 ? A MSE 21 22 1 Y 1 A ALA 22 ? A ALA 22 23 1 Y 1 A SER 23 ? A SER 23 24 1 Y 1 A MSE 24 ? A MSE 24 25 1 Y 1 A THR 25 ? A THR 25 26 1 Y 1 A GLY 26 ? A GLY 26 27 1 Y 1 A GLY 27 ? A GLY 27 28 1 Y 1 A GLU 28 ? A GLU 28 29 1 Y 1 A GLU 29 ? A GLU 29 30 1 Y 1 A MSE 30 ? A MSE 30 31 1 Y 1 A GLY 31 ? A GLY 31 32 1 Y 1 A ARG 32 ? A ARG 32 33 1 Y 1 A GLY 33 ? A GLY 33 34 1 Y 1 A SER 34 ? A SER 34 35 1 Y 1 A GLN 183 ? A GLN 183 36 1 Y 1 A MSE 184 ? A MSE 184 37 1 Y 1 A LYS 185 ? A LYS 185 38 1 Y 1 A GLN 186 ? A GLN 186 39 1 Y 1 A HIS 187 ? A HIS 187 40 1 Y 1 A CYS 188 ? A CYS 188 41 1 Y 1 A PRO 189 ? A PRO 189 42 1 Y 1 A HIS 190 ? A HIS 190 43 1 Y 1 A PRO 191 ? A PRO 191 44 1 Y 1 A ASP 192 ? A ASP 192 45 1 Y 1 A LEU 193 ? A LEU 193 46 1 Y 1 A LEU 194 ? A LEU 194 47 1 Y 1 A GLN 195 ? A GLN 195 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'TRIS(HYDROXYETHYL)AMINOMETHANE' TAM 3 'PHOSPHATE ION' PO4 4 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TAM 1 501 1 TAM TAM A . C 3 PO4 1 502 1 PO4 PO4 A . D 4 HOH 1 601 1 HOH HOH A . D 4 HOH 2 602 2 HOH HOH A . D 4 HOH 3 603 3 HOH HOH A . D 4 HOH 4 604 4 HOH HOH A . D 4 HOH 5 605 5 HOH HOH A . D 4 HOH 6 606 6 HOH HOH A . D 4 HOH 7 607 7 HOH HOH A . D 4 HOH 8 608 8 HOH HOH A . D 4 HOH 9 609 9 HOH HOH A . D 4 HOH 10 610 10 HOH HOH A . D 4 HOH 11 611 11 HOH HOH A . D 4 HOH 12 612 12 HOH HOH A . D 4 HOH 13 613 13 HOH HOH A . D 4 HOH 14 614 14 HOH HOH A . D 4 HOH 15 615 15 HOH HOH A . D 4 HOH 16 616 16 HOH HOH A . D 4 HOH 17 617 17 HOH HOH A . D 4 HOH 18 618 18 HOH HOH A . D 4 HOH 19 619 19 HOH HOH A . D 4 HOH 20 620 20 HOH HOH A . D 4 HOH 21 621 21 HOH HOH A . D 4 HOH 22 622 22 HOH HOH A . D 4 HOH 23 623 23 HOH HOH A . D 4 HOH 24 624 24 HOH HOH A . D 4 HOH 25 625 25 HOH HOH A . D 4 HOH 26 626 26 HOH HOH A . D 4 HOH 27 627 27 HOH HOH A . D 4 HOH 28 628 28 HOH HOH A . D 4 HOH 29 629 29 HOH HOH A . D 4 HOH 30 630 30 HOH HOH A . D 4 HOH 31 631 31 HOH HOH A . D 4 HOH 32 632 32 HOH HOH A . D 4 HOH 33 633 34 HOH HOH A . D 4 HOH 34 634 35 HOH HOH A . D 4 HOH 35 635 36 HOH HOH A . D 4 HOH 36 636 37 HOH HOH A . D 4 HOH 37 637 38 HOH HOH A . D 4 HOH 38 638 39 HOH HOH A . D 4 HOH 39 639 40 HOH HOH A . D 4 HOH 40 640 41 HOH HOH A . D 4 HOH 41 641 42 HOH HOH A . D 4 HOH 42 642 43 HOH HOH A . D 4 HOH 43 643 44 HOH HOH A . D 4 HOH 44 644 45 HOH HOH A . D 4 HOH 45 645 46 HOH HOH A . D 4 HOH 46 646 47 HOH HOH A . D 4 HOH 47 647 48 HOH HOH A . D 4 HOH 48 648 49 HOH HOH A . D 4 HOH 49 649 50 HOH HOH A . D 4 HOH 50 650 51 HOH HOH A . D 4 HOH 51 651 52 HOH HOH A . D 4 HOH 52 652 53 HOH HOH A . D 4 HOH 53 653 54 HOH HOH A . D 4 HOH 54 654 55 HOH HOH A . D 4 HOH 55 655 56 HOH HOH A . D 4 HOH 56 656 57 HOH HOH A . D 4 HOH 57 657 58 HOH HOH A . D 4 HOH 58 658 59 HOH HOH A . D 4 HOH 59 659 60 HOH HOH A . D 4 HOH 60 660 61 HOH HOH A . D 4 HOH 61 661 62 HOH HOH A . D 4 HOH 62 662 63 HOH HOH A . D 4 HOH 63 663 64 HOH HOH A . D 4 HOH 64 664 65 HOH HOH A . D 4 HOH 65 665 66 HOH HOH A . D 4 HOH 66 666 67 HOH HOH A . D 4 HOH 67 667 68 HOH HOH A . D 4 HOH 68 668 69 HOH HOH A . D 4 HOH 69 669 70 HOH HOH A . D 4 HOH 70 670 71 HOH HOH A . D 4 HOH 71 671 72 HOH HOH A . D 4 HOH 72 672 73 HOH HOH A . D 4 HOH 73 673 74 HOH HOH A . D 4 HOH 74 674 75 HOH HOH A . D 4 HOH 75 675 76 HOH HOH A . D 4 HOH 76 676 77 HOH HOH A . D 4 HOH 77 677 78 HOH HOH A . D 4 HOH 78 678 79 HOH HOH A . D 4 HOH 79 679 80 HOH HOH A . D 4 HOH 80 680 81 HOH HOH A . D 4 HOH 81 681 82 HOH HOH A . D 4 HOH 82 682 83 HOH HOH A . D 4 HOH 83 683 84 HOH HOH A . D 4 HOH 84 684 85 HOH HOH A . D 4 HOH 85 685 86 HOH HOH A . D 4 HOH 86 686 87 HOH HOH A . D 4 HOH 87 687 88 HOH HOH A . D 4 HOH 88 688 89 HOH HOH A . D 4 HOH 89 689 90 HOH HOH A . D 4 HOH 90 690 91 HOH HOH A . D 4 HOH 91 691 92 HOH HOH A . D 4 HOH 92 692 93 HOH HOH A . D 4 HOH 93 693 94 HOH HOH A . D 4 HOH 94 694 95 HOH HOH A . D 4 HOH 95 695 96 HOH HOH A . D 4 HOH 96 696 97 HOH HOH A . D 4 HOH 97 697 98 HOH HOH A . D 4 HOH 98 698 99 HOH HOH A . D 4 HOH 99 699 100 HOH HOH A . D 4 HOH 100 700 101 HOH HOH A . D 4 HOH 101 701 102 HOH HOH A . D 4 HOH 102 702 103 HOH HOH A . D 4 HOH 103 703 104 HOH HOH A . D 4 HOH 104 704 105 HOH HOH A . D 4 HOH 105 705 106 HOH HOH A . D 4 HOH 106 706 107 HOH HOH A . D 4 HOH 107 707 108 HOH HOH A . D 4 HOH 108 708 109 HOH HOH A . D 4 HOH 109 709 110 HOH HOH A . D 4 HOH 110 710 111 HOH HOH A . D 4 HOH 111 711 112 HOH HOH A . D 4 HOH 112 712 113 HOH HOH A . D 4 HOH 113 713 114 HOH HOH A . #