data_4LJ1 # _entry.id 4LJ1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4LJ1 RCSB RCSB080690 WWPDB D_1000080690 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4LJ1 _pdbx_database_status.recvd_initial_deposition_date 2013-07-04 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Both, D.' 1 'Steiner, E.M.' 2 'Linder, D.C.' 3 'Schnell, R.' 4 'Schneider, G.' 5 # _citation.id primary _citation.title 'RipD (Rv1566c) from Mycobacterium tuberculosis: adaptation of an NlpC/p60 domain to a non-catalytic peptidoglycan-binding function.' _citation.journal_abbrev Biochem.J. _citation.journal_volume 457 _citation.page_first 33 _citation.page_last 41 _citation.year 2014 _citation.journal_id_ASTM BIJOAK _citation.country UK _citation.journal_id_ISSN 0264-6021 _citation.journal_id_CSD 0043 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24107184 _citation.pdbx_database_id_DOI 10.1042/BJ20131227 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Both, D.' 1 primary 'Steiner, E.M.' 2 primary 'Izumi, A.' 3 primary 'Schneider, G.' 4 primary 'Schnell, R.' 5 # _cell.entry_id 4LJ1 _cell.length_a 80.247 _cell.length_b 30.752 _cell.length_c 61.921 _cell.angle_alpha 90.00 _cell.angle_beta 120.85 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4LJ1 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Invasion-associated protein' 15438.562 1 ? ? 'UNP RESIDUES 38-182' ? 2 water nat water 18.015 139 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMDYQQITDVVIARGLSQRGVPFSWAGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQ QARKGDLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQPA ; _entity_poly.pdbx_seq_one_letter_code_can ;SMDYQQITDVVIARGLSQRGVPFSWAGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQ QARKGDLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQPA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 ASP n 1 4 TYR n 1 5 GLN n 1 6 GLN n 1 7 ILE n 1 8 THR n 1 9 ASP n 1 10 VAL n 1 11 VAL n 1 12 ILE n 1 13 ALA n 1 14 ARG n 1 15 GLY n 1 16 LEU n 1 17 SER n 1 18 GLN n 1 19 ARG n 1 20 GLY n 1 21 VAL n 1 22 PRO n 1 23 PHE n 1 24 SER n 1 25 TRP n 1 26 ALA n 1 27 GLY n 1 28 GLY n 1 29 GLY n 1 30 ILE n 1 31 SER n 1 32 GLY n 1 33 PRO n 1 34 THR n 1 35 ARG n 1 36 GLY n 1 37 THR n 1 38 GLY n 1 39 THR n 1 40 GLY n 1 41 ILE n 1 42 ASN n 1 43 THR n 1 44 VAL n 1 45 GLY n 1 46 PHE n 1 47 ASP n 1 48 ALA n 1 49 SER n 1 50 GLY n 1 51 LEU n 1 52 ILE n 1 53 GLN n 1 54 TYR n 1 55 ALA n 1 56 TYR n 1 57 ALA n 1 58 GLY n 1 59 ALA n 1 60 GLY n 1 61 LEU n 1 62 LYS n 1 63 LEU n 1 64 PRO n 1 65 ARG n 1 66 SER n 1 67 SER n 1 68 GLY n 1 69 GLN n 1 70 MET n 1 71 TYR n 1 72 LYS n 1 73 VAL n 1 74 GLY n 1 75 GLN n 1 76 LYS n 1 77 VAL n 1 78 LEU n 1 79 PRO n 1 80 GLN n 1 81 GLN n 1 82 ALA n 1 83 ARG n 1 84 LYS n 1 85 GLY n 1 86 ASP n 1 87 LEU n 1 88 ILE n 1 89 PHE n 1 90 TYR n 1 91 GLY n 1 92 PRO n 1 93 GLU n 1 94 GLY n 1 95 THR n 1 96 GLN n 1 97 SER n 1 98 VAL n 1 99 ALA n 1 100 LEU n 1 101 TYR n 1 102 LEU n 1 103 GLY n 1 104 LYS n 1 105 GLY n 1 106 GLN n 1 107 MET n 1 108 LEU n 1 109 GLU n 1 110 VAL n 1 111 GLY n 1 112 ASP n 1 113 VAL n 1 114 VAL n 1 115 GLN n 1 116 VAL n 1 117 SER n 1 118 PRO n 1 119 VAL n 1 120 ARG n 1 121 THR n 1 122 ASN n 1 123 GLY n 1 124 MET n 1 125 THR n 1 126 PRO n 1 127 TYR n 1 128 LEU n 1 129 VAL n 1 130 ARG n 1 131 VAL n 1 132 LEU n 1 133 GLY n 1 134 THR n 1 135 GLN n 1 136 PRO n 1 137 THR n 1 138 PRO n 1 139 VAL n 1 140 GLN n 1 141 GLN n 1 142 ALA n 1 143 PRO n 1 144 VAL n 1 145 GLN n 1 146 PRO n 1 147 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene RVBD_1566c _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain H37Rv _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mycobacterium tuberculosis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83332 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code O06624_MYCTU _struct_ref.pdbx_db_accession O06624 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DYQQITDVVIARGLSQRGVPFSWAGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQA RKGDLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQPA ; _struct_ref.pdbx_align_begin 38 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4LJ1 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 147 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O06624 _struct_ref_seq.db_align_beg 38 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 182 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 38 _struct_ref_seq.pdbx_auth_seq_align_end 182 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4LJ1 SER A 1 ? UNP O06624 ? ? 'EXPRESSION TAG' 36 1 1 4LJ1 MET A 2 ? UNP O06624 ? ? 'EXPRESSION TAG' 37 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4LJ1 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.12 _exptl_crystal.density_percent_sol 42.10 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.9 _exptl_crystal_grow.pdbx_details '0.1M Tris/HCl pH 7.9, 0.2M Trimethylamine N-oxide, 20% PEG 2000 MME, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2013-06-26 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'horizontally diffracting Si (111) monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.873 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID23-2' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID23-2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.873 # _reflns.entry_id 4LJ1 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 53.16 _reflns.d_resolution_high 1.17 _reflns.number_obs 43616 _reflns.number_all 43924 _reflns.percent_possible_obs 99.3 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_rejects _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.17 1.69 96.5 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 1 1.69 53.16 99.3 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 # _refine.entry_id 4LJ1 _refine.ls_number_reflns_obs 41701 _refine.ls_number_reflns_all 43924 _refine.pdbx_ls_sigma_I 2.0 _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 53.16 _refine.ls_d_res_high 1.17 _refine.ls_percent_reflns_obs 99.32 _refine.ls_R_factor_obs 0.14773 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.14672 _refine.ls_R_factor_R_free 0.16648 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 2221 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.974 _refine.correlation_coeff_Fo_to_Fc_free 0.970 _refine.B_iso_mean 11.969 _refine.aniso_B[1][1] -0.10 _refine.aniso_B[2][2] 0.21 _refine.aniso_B[3][3] -0.18 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] -0.07 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.034 _refine.pdbx_overall_ESU_R_Free 0.033 _refine.overall_SU_ML 0.022 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 1.092 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 997 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 139 _refine_hist.number_atoms_total 1136 _refine_hist.d_res_high 1.17 _refine_hist.d_res_low 53.16 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.010 0.020 ? 1076 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.001 0.020 ? 743 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.441 1.971 ? 1473 ? 'X-RAY DIFFRACTION' r_angle_other_deg 0.930 3.000 ? 1820 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.068 5.000 ? 151 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 28.489 23.333 ? 42 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 13.315 15.000 ? 174 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 19.215 15.000 ? 8 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.093 0.200 ? 163 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.008 0.021 ? 1231 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.001 0.020 ? 221 ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_scbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_long_range_B_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_long_range_B_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr 3.105 3.000 ? 1819 ? 'X-RAY DIFFRACTION' r_sphericity_free 25.397 5.000 ? 48 ? 'X-RAY DIFFRACTION' r_sphericity_bonded 8.417 5.000 ? 1880 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.169 _refine_ls_shell.d_res_low 1.199 _refine_ls_shell.number_reflns_R_work 2764 _refine_ls_shell.R_factor_R_work 0.280 _refine_ls_shell.percent_reflns_obs 93.10 _refine_ls_shell.R_factor_R_free 0.321 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 139 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 4LJ1 _struct.title ;RipD (Rv1566c) from Mycobacterium tuberculosis: a non-catalytic NlpC/p60 domain protein with two penta-peptide repeat units (PVQQA-PVQPA) ; _struct.pdbx_descriptor 'Invasion-associated protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4LJ1 _struct_keywords.pdbx_keywords 'CELL INVASION' _struct_keywords.text 'NlpC/P60, Cell wall stabilisation, periplasmic, CELL INVASION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TYR A 4 ? SER A 17 ? TYR A 39 SER A 52 1 ? 14 HELX_P HELX_P2 2 THR A 37 ? ILE A 41 ? THR A 72 ILE A 76 5 ? 5 HELX_P HELX_P3 3 ASP A 47 ? GLY A 58 ? ASP A 82 GLY A 93 1 ? 12 HELX_P HELX_P4 4 SER A 66 ? GLY A 74 ? SER A 101 GLY A 109 1 ? 9 HELX_P HELX_P5 5 LEU A 78 ? ALA A 82 ? LEU A 113 ALA A 117 5 ? 5 HELX_P HELX_P6 6 GLY A 91 ? THR A 95 ? GLY A 126 THR A 130 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 34 ? ARG A 35 ? THR A 69 ARG A 70 A 2 VAL A 44 ? GLY A 45 ? VAL A 79 GLY A 80 B 1 GLN A 75 ? VAL A 77 ? GLN A 110 VAL A 112 B 2 LEU A 128 ? ARG A 130 ? LEU A 163 ARG A 165 C 1 LEU A 87 ? TYR A 90 ? LEU A 122 TYR A 125 C 2 SER A 97 ? GLY A 103 ? SER A 132 GLY A 138 C 3 GLN A 106 ? VAL A 110 ? GLN A 141 VAL A 145 C 4 VAL A 114 ? PRO A 118 ? VAL A 149 PRO A 153 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 34 ? N THR A 69 O GLY A 45 ? O GLY A 80 B 1 2 N VAL A 77 ? N VAL A 112 O LEU A 128 ? O LEU A 163 C 1 2 N ILE A 88 ? N ILE A 123 O ALA A 99 ? O ALA A 134 C 2 3 N LEU A 102 ? N LEU A 137 O GLN A 106 ? O GLN A 141 C 3 4 N MET A 107 ? N MET A 142 O SER A 117 ? O SER A 152 # _database_PDB_matrix.entry_id 4LJ1 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4LJ1 _atom_sites.fract_transf_matrix[1][1] 0.012462 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.007444 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.032518 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018812 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 36 ? ? ? A . n A 1 2 MET 2 37 ? ? ? A . n A 1 3 ASP 3 38 ? ? ? A . n A 1 4 TYR 4 39 39 TYR TYR A . n A 1 5 GLN 5 40 40 GLN GLN A . n A 1 6 GLN 6 41 41 GLN GLN A . n A 1 7 ILE 7 42 42 ILE ILE A . n A 1 8 THR 8 43 43 THR THR A . n A 1 9 ASP 9 44 44 ASP ASP A . n A 1 10 VAL 10 45 45 VAL VAL A . n A 1 11 VAL 11 46 46 VAL VAL A . n A 1 12 ILE 12 47 47 ILE ILE A . n A 1 13 ALA 13 48 48 ALA ALA A . n A 1 14 ARG 14 49 49 ARG ARG A . n A 1 15 GLY 15 50 50 GLY GLY A . n A 1 16 LEU 16 51 51 LEU LEU A . n A 1 17 SER 17 52 52 SER SER A . n A 1 18 GLN 18 53 53 GLN GLN A . n A 1 19 ARG 19 54 54 ARG ARG A . n A 1 20 GLY 20 55 55 GLY GLY A . n A 1 21 VAL 21 56 56 VAL VAL A . n A 1 22 PRO 22 57 57 PRO PRO A . n A 1 23 PHE 23 58 58 PHE PHE A . n A 1 24 SER 24 59 59 SER SER A . n A 1 25 TRP 25 60 60 TRP TRP A . n A 1 26 ALA 26 61 61 ALA ALA A . n A 1 27 GLY 27 62 62 GLY GLY A . n A 1 28 GLY 28 63 63 GLY GLY A . n A 1 29 GLY 29 64 64 GLY GLY A . n A 1 30 ILE 30 65 65 ILE ILE A . n A 1 31 SER 31 66 66 SER SER A . n A 1 32 GLY 32 67 67 GLY GLY A . n A 1 33 PRO 33 68 68 PRO PRO A . n A 1 34 THR 34 69 69 THR THR A . n A 1 35 ARG 35 70 70 ARG ARG A . n A 1 36 GLY 36 71 71 GLY GLY A . n A 1 37 THR 37 72 72 THR THR A . n A 1 38 GLY 38 73 73 GLY GLY A . n A 1 39 THR 39 74 74 THR THR A . n A 1 40 GLY 40 75 75 GLY GLY A . n A 1 41 ILE 41 76 76 ILE ILE A . n A 1 42 ASN 42 77 77 ASN ASN A . n A 1 43 THR 43 78 78 THR THR A . n A 1 44 VAL 44 79 79 VAL VAL A . n A 1 45 GLY 45 80 80 GLY GLY A . n A 1 46 PHE 46 81 81 PHE PHE A . n A 1 47 ASP 47 82 82 ASP ASP A . n A 1 48 ALA 48 83 83 ALA ALA A . n A 1 49 SER 49 84 84 SER SER A . n A 1 50 GLY 50 85 85 GLY GLY A . n A 1 51 LEU 51 86 86 LEU LEU A . n A 1 52 ILE 52 87 87 ILE ILE A . n A 1 53 GLN 53 88 88 GLN GLN A . n A 1 54 TYR 54 89 89 TYR TYR A . n A 1 55 ALA 55 90 90 ALA ALA A . n A 1 56 TYR 56 91 91 TYR TYR A . n A 1 57 ALA 57 92 92 ALA ALA A . n A 1 58 GLY 58 93 93 GLY GLY A . n A 1 59 ALA 59 94 94 ALA ALA A . n A 1 60 GLY 60 95 95 GLY GLY A . n A 1 61 LEU 61 96 96 LEU LEU A . n A 1 62 LYS 62 97 97 LYS LYS A . n A 1 63 LEU 63 98 98 LEU LEU A . n A 1 64 PRO 64 99 99 PRO PRO A . n A 1 65 ARG 65 100 100 ARG ARG A . n A 1 66 SER 66 101 101 SER SER A . n A 1 67 SER 67 102 102 SER SER A . n A 1 68 GLY 68 103 103 GLY GLY A . n A 1 69 GLN 69 104 104 GLN GLN A . n A 1 70 MET 70 105 105 MET MET A . n A 1 71 TYR 71 106 106 TYR TYR A . n A 1 72 LYS 72 107 107 LYS LYS A . n A 1 73 VAL 73 108 108 VAL VAL A . n A 1 74 GLY 74 109 109 GLY GLY A . n A 1 75 GLN 75 110 110 GLN GLN A . n A 1 76 LYS 76 111 111 LYS LYS A . n A 1 77 VAL 77 112 112 VAL VAL A . n A 1 78 LEU 78 113 113 LEU LEU A . n A 1 79 PRO 79 114 114 PRO PRO A . n A 1 80 GLN 80 115 115 GLN GLN A . n A 1 81 GLN 81 116 116 GLN GLN A . n A 1 82 ALA 82 117 117 ALA ALA A . n A 1 83 ARG 83 118 118 ARG ARG A . n A 1 84 LYS 84 119 119 LYS LYS A . n A 1 85 GLY 85 120 120 GLY GLY A . n A 1 86 ASP 86 121 121 ASP ASP A . n A 1 87 LEU 87 122 122 LEU LEU A . n A 1 88 ILE 88 123 123 ILE ILE A . n A 1 89 PHE 89 124 124 PHE PHE A . n A 1 90 TYR 90 125 125 TYR TYR A . n A 1 91 GLY 91 126 126 GLY GLY A . n A 1 92 PRO 92 127 127 PRO PRO A . n A 1 93 GLU 93 128 128 GLU GLU A . n A 1 94 GLY 94 129 129 GLY GLY A . n A 1 95 THR 95 130 130 THR THR A . n A 1 96 GLN 96 131 131 GLN GLN A . n A 1 97 SER 97 132 132 SER SER A . n A 1 98 VAL 98 133 133 VAL VAL A . n A 1 99 ALA 99 134 134 ALA ALA A . n A 1 100 LEU 100 135 135 LEU LEU A . n A 1 101 TYR 101 136 136 TYR TYR A . n A 1 102 LEU 102 137 137 LEU LEU A . n A 1 103 GLY 103 138 138 GLY GLY A . n A 1 104 LYS 104 139 139 LYS LYS A . n A 1 105 GLY 105 140 140 GLY GLY A . n A 1 106 GLN 106 141 141 GLN GLN A . n A 1 107 MET 107 142 142 MET MET A . n A 1 108 LEU 108 143 143 LEU LEU A . n A 1 109 GLU 109 144 144 GLU GLU A . n A 1 110 VAL 110 145 145 VAL VAL A . n A 1 111 GLY 111 146 146 GLY GLY A . n A 1 112 ASP 112 147 147 ASP ASP A . n A 1 113 VAL 113 148 148 VAL VAL A . n A 1 114 VAL 114 149 149 VAL VAL A . n A 1 115 GLN 115 150 150 GLN GLN A . n A 1 116 VAL 116 151 151 VAL VAL A . n A 1 117 SER 117 152 152 SER SER A . n A 1 118 PRO 118 153 153 PRO PRO A . n A 1 119 VAL 119 154 154 VAL VAL A . n A 1 120 ARG 120 155 155 ARG ARG A . n A 1 121 THR 121 156 156 THR THR A . n A 1 122 ASN 122 157 157 ASN ASN A . n A 1 123 GLY 123 158 158 GLY GLY A . n A 1 124 MET 124 159 159 MET MET A . n A 1 125 THR 125 160 160 THR THR A . n A 1 126 PRO 126 161 161 PRO PRO A . n A 1 127 TYR 127 162 162 TYR TYR A . n A 1 128 LEU 128 163 163 LEU LEU A . n A 1 129 VAL 129 164 164 VAL VAL A . n A 1 130 ARG 130 165 165 ARG ARG A . n A 1 131 VAL 131 166 166 VAL VAL A . n A 1 132 LEU 132 167 167 LEU LEU A . n A 1 133 GLY 133 168 168 GLY GLY A . n A 1 134 THR 134 169 ? ? ? A . n A 1 135 GLN 135 170 ? ? ? A . n A 1 136 PRO 136 171 ? ? ? A . n A 1 137 THR 137 172 ? ? ? A . n A 1 138 PRO 138 173 ? ? ? A . n A 1 139 VAL 139 174 ? ? ? A . n A 1 140 GLN 140 175 ? ? ? A . n A 1 141 GLN 141 176 ? ? ? A . n A 1 142 ALA 142 177 ? ? ? A . n A 1 143 PRO 143 178 178 PRO PRO A . n A 1 144 VAL 144 179 179 VAL VAL A . n A 1 145 GLN 145 180 180 GLN GLN A . n A 1 146 PRO 146 181 181 PRO PRO A . n A 1 147 ALA 147 182 182 ALA ALA A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-11-06 2 'Structure model' 1 1 2015-06-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DNA 'data collection' . ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.6.0117 ? 3 SCALA 'data scaling' . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NH1 A ARG 155 ? A O A HOH 330 ? ? 1.84 2 1 OE1 A GLU 144 ? ? NH2 A ARG 155 ? A 2.01 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 283 ? ? 1_555 O A HOH 333 ? ? 1_545 1.09 2 1 CH2 A TRP 60 ? B 1_555 O A HOH 308 ? ? 2_656 2.14 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 36 ? A SER 1 2 1 Y 1 A MET 37 ? A MET 2 3 1 Y 1 A ASP 38 ? A ASP 3 4 1 Y 1 A THR 169 ? A THR 134 5 1 Y 1 A GLN 170 ? A GLN 135 6 1 Y 1 A PRO 171 ? A PRO 136 7 1 Y 1 A THR 172 ? A THR 137 8 1 Y 1 A PRO 173 ? A PRO 138 9 1 Y 1 A VAL 174 ? A VAL 139 10 1 Y 1 A GLN 175 ? A GLN 140 11 1 Y 1 A GLN 176 ? A GLN 141 12 1 Y 1 A ALA 177 ? A ALA 142 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 201 1 HOH HOH A . B 2 HOH 2 202 2 HOH HOH A . B 2 HOH 3 203 3 HOH HOH A . B 2 HOH 4 204 4 HOH HOH A . B 2 HOH 5 205 5 HOH HOH A . B 2 HOH 6 206 6 HOH HOH A . B 2 HOH 7 207 7 HOH HOH A . B 2 HOH 8 208 8 HOH HOH A . B 2 HOH 9 209 9 HOH HOH A . B 2 HOH 10 210 10 HOH HOH A . B 2 HOH 11 211 11 HOH HOH A . B 2 HOH 12 212 12 HOH HOH A . B 2 HOH 13 213 13 HOH HOH A . B 2 HOH 14 214 14 HOH HOH A . B 2 HOH 15 215 15 HOH HOH A . B 2 HOH 16 216 16 HOH HOH A . B 2 HOH 17 217 17 HOH HOH A . B 2 HOH 18 218 18 HOH HOH A . B 2 HOH 19 219 19 HOH HOH A . B 2 HOH 20 220 20 HOH HOH A . B 2 HOH 21 221 21 HOH HOH A . B 2 HOH 22 222 22 HOH HOH A . B 2 HOH 23 223 23 HOH HOH A . B 2 HOH 24 224 24 HOH HOH A . B 2 HOH 25 225 25 HOH HOH A . B 2 HOH 26 226 26 HOH HOH A . B 2 HOH 27 227 27 HOH HOH A . B 2 HOH 28 228 28 HOH HOH A . B 2 HOH 29 229 29 HOH HOH A . B 2 HOH 30 230 30 HOH HOH A . B 2 HOH 31 231 31 HOH HOH A . B 2 HOH 32 232 32 HOH HOH A . B 2 HOH 33 233 33 HOH HOH A . B 2 HOH 34 234 34 HOH HOH A . B 2 HOH 35 235 35 HOH HOH A . B 2 HOH 36 236 36 HOH HOH A . B 2 HOH 37 237 37 HOH HOH A . B 2 HOH 38 238 38 HOH HOH A . B 2 HOH 39 239 39 HOH HOH A . B 2 HOH 40 240 40 HOH HOH A . B 2 HOH 41 241 41 HOH HOH A . B 2 HOH 42 242 42 HOH HOH A . B 2 HOH 43 243 43 HOH HOH A . B 2 HOH 44 244 44 HOH HOH A . B 2 HOH 45 245 45 HOH HOH A . B 2 HOH 46 246 46 HOH HOH A . B 2 HOH 47 247 47 HOH HOH A . B 2 HOH 48 248 48 HOH HOH A . B 2 HOH 49 249 49 HOH HOH A . B 2 HOH 50 250 50 HOH HOH A . B 2 HOH 51 251 51 HOH HOH A . B 2 HOH 52 252 52 HOH HOH A . B 2 HOH 53 253 53 HOH HOH A . B 2 HOH 54 254 54 HOH HOH A . B 2 HOH 55 255 55 HOH HOH A . B 2 HOH 56 256 56 HOH HOH A . B 2 HOH 57 257 57 HOH HOH A . B 2 HOH 58 258 58 HOH HOH A . B 2 HOH 59 259 59 HOH HOH A . B 2 HOH 60 260 60 HOH HOH A . B 2 HOH 61 261 61 HOH HOH A . B 2 HOH 62 262 62 HOH HOH A . B 2 HOH 63 263 63 HOH HOH A . B 2 HOH 64 264 64 HOH HOH A . B 2 HOH 65 265 65 HOH HOH A . B 2 HOH 66 266 66 HOH HOH A . B 2 HOH 67 267 67 HOH HOH A . B 2 HOH 68 268 68 HOH HOH A . B 2 HOH 69 269 69 HOH HOH A . B 2 HOH 70 270 70 HOH HOH A . B 2 HOH 71 271 71 HOH HOH A . B 2 HOH 72 272 72 HOH HOH A . B 2 HOH 73 273 73 HOH HOH A . B 2 HOH 74 274 74 HOH HOH A . B 2 HOH 75 275 75 HOH HOH A . B 2 HOH 76 276 76 HOH HOH A . B 2 HOH 77 277 77 HOH HOH A . B 2 HOH 78 278 78 HOH HOH A . B 2 HOH 79 279 79 HOH HOH A . B 2 HOH 80 280 80 HOH HOH A . B 2 HOH 81 281 81 HOH HOH A . B 2 HOH 82 282 82 HOH HOH A . B 2 HOH 83 283 83 HOH HOH A . B 2 HOH 84 284 84 HOH HOH A . B 2 HOH 85 285 85 HOH HOH A . B 2 HOH 86 286 86 HOH HOH A . B 2 HOH 87 287 87 HOH HOH A . B 2 HOH 88 288 88 HOH HOH A . B 2 HOH 89 289 89 HOH HOH A . B 2 HOH 90 290 90 HOH HOH A . B 2 HOH 91 291 91 HOH HOH A . B 2 HOH 92 292 92 HOH HOH A . B 2 HOH 93 293 93 HOH HOH A . B 2 HOH 94 294 94 HOH HOH A . B 2 HOH 95 295 95 HOH HOH A . B 2 HOH 96 296 96 HOH HOH A . B 2 HOH 97 297 97 HOH HOH A . B 2 HOH 98 298 98 HOH HOH A . B 2 HOH 99 299 99 HOH HOH A . B 2 HOH 100 300 100 HOH HOH A . B 2 HOH 101 301 101 HOH HOH A . B 2 HOH 102 302 102 HOH HOH A . B 2 HOH 103 303 103 HOH HOH A . B 2 HOH 104 304 104 HOH HOH A . B 2 HOH 105 305 105 HOH HOH A . B 2 HOH 106 306 106 HOH HOH A . B 2 HOH 107 307 107 HOH HOH A . B 2 HOH 108 308 108 HOH HOH A . B 2 HOH 109 309 109 HOH HOH A . B 2 HOH 110 310 110 HOH HOH A . B 2 HOH 111 311 111 HOH HOH A . B 2 HOH 112 312 112 HOH HOH A . B 2 HOH 113 313 113 HOH HOH A . B 2 HOH 114 314 114 HOH HOH A . B 2 HOH 115 315 115 HOH HOH A . B 2 HOH 116 316 116 HOH HOH A . B 2 HOH 117 317 117 HOH HOH A . B 2 HOH 118 318 118 HOH HOH A . B 2 HOH 119 319 119 HOH HOH A . B 2 HOH 120 320 120 HOH HOH A . B 2 HOH 121 321 121 HOH HOH A . B 2 HOH 122 322 122 HOH HOH A . B 2 HOH 123 323 123 HOH HOH A . B 2 HOH 124 324 124 HOH HOH A . B 2 HOH 125 325 125 HOH HOH A . B 2 HOH 126 326 126 HOH HOH A . B 2 HOH 127 327 127 HOH HOH A . B 2 HOH 128 328 128 HOH HOH A . B 2 HOH 129 329 129 HOH HOH A . B 2 HOH 130 330 130 HOH HOH A . B 2 HOH 131 331 131 HOH HOH A . B 2 HOH 132 332 132 HOH HOH A . B 2 HOH 133 333 133 HOH HOH A . B 2 HOH 134 334 134 HOH HOH A . B 2 HOH 135 335 135 HOH HOH A . B 2 HOH 136 336 136 HOH HOH A . B 2 HOH 137 337 137 HOH HOH A . B 2 HOH 138 338 138 HOH HOH A . B 2 HOH 139 339 139 HOH HOH A . #