HEADER HYDROLASE 04-JUL-13 4LJ3 TITLE CRYSTAL STRUCTURE OF THE EAL DOMAIN OF C-DI-GMP SPECIFIC TITLE 2 PHOSPHODIESTERASE YAHA IN COMPLEX WITH SUBSTRATE C-DI-GMP AND CA++ COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYCLIC DI-GMP PHOSPHODIESTERASE YAHA; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: EAL DOMAIN CONTAINING RESIDUES 101-362; COMPND 5 EC: 3.1.4.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: YAHA, B0315, JW0307; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS PGPG, PHOSPHODIESTERASE, TIM-BARREL, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.SUNDRIYAL,T.SCHIRMER REVDAT 4 20-SEP-23 4LJ3 1 REMARK SEQADV HETSYN LINK REVDAT 3 14-MAY-14 4LJ3 1 JRNL REVDAT 2 12-FEB-14 4LJ3 1 JRNL REMARK REVDAT 1 29-JAN-14 4LJ3 0 JRNL AUTH A.SUNDRIYAL,C.MASSA,D.SAMORAY,F.ZEHENDER,T.SHARPE,U.JENAL, JRNL AUTH 2 T.SCHIRMER JRNL TITL INHERENT REGULATION OF EAL DOMAIN-CATALYZED HYDROLYSIS OF JRNL TITL 2 SECOND MESSENGER CYCLIC DI-GMP. JRNL REF J.BIOL.CHEM. V. 289 6978 2014 JRNL REFN ISSN 0021-9258 JRNL PMID 24451384 JRNL DOI 10.1074/JBC.M113.516195 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.63 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 56830 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2833 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3972 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.86 REMARK 3 BIN R VALUE (WORKING SET) : 0.2720 REMARK 3 BIN FREE R VALUE SET COUNT : 201 REMARK 3 BIN FREE R VALUE : 0.3140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4006 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 124 REMARK 3 SOLVENT ATOMS : 412 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.66000 REMARK 3 B22 (A**2) : -0.60000 REMARK 3 B33 (A**2) : 0.10000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.13000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.094 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.572 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.928 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.909 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4335 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4130 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5934 ; 1.510 ; 1.993 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9527 ; 0.968 ; 3.002 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 528 ; 5.503 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 184 ;35.396 ;24.783 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 697 ;14.445 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;20.713 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 670 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4845 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 978 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 104 359 B 104 359 15881 0.090 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 104 A 359 REMARK 3 ORIGIN FOR THE GROUP (A): 15.6335 0.3029 27.7381 REMARK 3 T TENSOR REMARK 3 T11: 0.0156 T22: 0.0289 REMARK 3 T33: 0.0330 T12: -0.0008 REMARK 3 T13: 0.0192 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 0.6758 L22: 0.5868 REMARK 3 L33: 0.5359 L12: -0.2761 REMARK 3 L13: 0.2796 L23: -0.2723 REMARK 3 S TENSOR REMARK 3 S11: 0.0090 S12: 0.0193 S13: 0.0020 REMARK 3 S21: -0.0347 S22: -0.0100 S23: -0.0502 REMARK 3 S31: 0.0427 S32: 0.0445 S33: 0.0010 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 104 B 359 REMARK 3 ORIGIN FOR THE GROUP (A): 2.1607 23.2005 9.1030 REMARK 3 T TENSOR REMARK 3 T11: 0.0195 T22: 0.0343 REMARK 3 T33: 0.0254 T12: -0.0021 REMARK 3 T13: 0.0115 T23: -0.0051 REMARK 3 L TENSOR REMARK 3 L11: 0.3495 L22: 0.6121 REMARK 3 L33: 1.0335 L12: -0.2574 REMARK 3 L13: 0.2635 L23: -0.4266 REMARK 3 S TENSOR REMARK 3 S11: 0.0315 S12: 0.0496 S13: 0.0193 REMARK 3 S21: -0.0842 S22: -0.0159 S23: 0.0028 REMARK 3 S31: 0.0171 S32: 0.0655 S33: -0.0156 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : NULL REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4LJ3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1000080692. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-MAY-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA CCP4_3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56878 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 20.630 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.420 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.4426 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.59 REMARK 200 R MERGE FOR SHELL (I) : 0.37000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.780 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4KIE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12.5% W/V PEG 1000, 12.5% W/V PEG REMARK 280 3350, 12.5% V/V MPD, 10 % OF ALCOHOL MIXTURE (200 MM OF EACH OF REMARK 280 1,6-HEXANEDIOL, 1-BUTANOL, (RS)-1,2- PROPANEDIOL, 2-PROPANOL, 1, REMARK 280 4-BUTANEDIOL AND 1,3-PROPANEDIOL), 100 MM MES/IMIDAZOLE PH 6.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 35.15000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 84 REMARK 465 HIS A 85 REMARK 465 HIS A 86 REMARK 465 HIS A 87 REMARK 465 HIS A 88 REMARK 465 HIS A 89 REMARK 465 HIS A 90 REMARK 465 SER A 91 REMARK 465 SER A 92 REMARK 465 GLY A 93 REMARK 465 LEU A 94 REMARK 465 VAL A 95 REMARK 465 PRO A 96 REMARK 465 ARG A 97 REMARK 465 GLY A 98 REMARK 465 SER A 99 REMARK 465 HIS A 100 REMARK 465 ASP A 101 REMARK 465 ASN A 102 REMARK 465 HIS A 103 REMARK 465 ALA A 360 REMARK 465 GLY A 361 REMARK 465 GLY A 362 REMARK 465 MET B 84 REMARK 465 HIS B 85 REMARK 465 HIS B 86 REMARK 465 HIS B 87 REMARK 465 HIS B 88 REMARK 465 HIS B 89 REMARK 465 HIS B 90 REMARK 465 SER B 91 REMARK 465 SER B 92 REMARK 465 GLY B 93 REMARK 465 LEU B 94 REMARK 465 VAL B 95 REMARK 465 PRO B 96 REMARK 465 ARG B 97 REMARK 465 GLY B 98 REMARK 465 SER B 99 REMARK 465 HIS B 100 REMARK 465 ASP B 101 REMARK 465 ASN B 102 REMARK 465 HIS B 103 REMARK 465 ALA B 360 REMARK 465 GLY B 361 REMARK 465 GLY B 362 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 118 CG CD OE1 OE2 REMARK 470 LYS A 359 CG CD CE NZ REMARK 470 GLU B 118 CG CD OE1 OE2 REMARK 470 LYS B 311 CG CD CE NZ REMARK 470 LYS B 359 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 581 O HOH B 512 1.77 REMARK 500 NZ LYS A 286 O HOH A 695 1.96 REMARK 500 OD1 ASP A 303 O HOH A 621 2.03 REMARK 500 O HOH B 504 O HOH B 566 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 159 -26.75 -160.01 REMARK 500 ILE A 297 -60.39 -108.12 REMARK 500 PHE B 159 -26.59 -161.05 REMARK 500 ILE B 297 -60.75 -106.03 REMARK 500 TYR B 343 -61.34 -95.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 141 OE1 REMARK 620 2 ASN A 200 OD1 81.3 REMARK 620 3 GLU A 232 OE1 83.3 96.2 REMARK 620 4 ASP A 262 OD1 151.2 127.0 87.4 REMARK 620 5 ASP A 262 OD2 156.5 75.3 97.3 51.9 REMARK 620 6 C2E A 401 O2P 93.8 85.4 176.5 94.2 86.2 REMARK 620 7 HOH A 505 O 74.7 154.8 88.6 77.9 128.8 88.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 263 OD1 REMARK 620 2 GLU A 319 OE2 105.0 REMARK 620 3 GLU A 319 OE1 125.0 54.0 REMARK 620 4 GLU A 319 OE1 146.0 63.8 21.8 REMARK 620 5 C2E A 401 O1P 95.6 150.4 96.7 87.3 REMARK 620 6 HOH A 506 O 68.9 77.7 57.6 77.3 90.5 REMARK 620 7 HOH A 520 O 78.0 77.4 129.0 125.5 128.5 131.1 REMARK 620 8 HOH A 586 O 143.6 87.4 90.1 70.2 88.5 147.4 71.5 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 141 OE1 REMARK 620 2 ASN B 200 OD1 83.3 REMARK 620 3 GLU B 232 OE1 83.8 96.4 REMARK 620 4 ASP B 262 OD1 149.2 126.3 84.6 REMARK 620 5 ASP B 262 OD2 158.3 75.1 96.6 51.7 REMARK 620 6 C2E B 401 O2P 96.5 88.1 175.4 92.9 84.8 REMARK 620 7 HOH B 503 O 77.8 159.8 88.5 73.5 123.9 87.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 263 OD1 REMARK 620 2 ASP B 285 OD1 79.1 REMARK 620 3 GLU B 319 OE2 148.9 88.1 REMARK 620 4 C2E B 401 O1P 98.8 158.0 103.1 REMARK 620 5 HOH B 505 O 86.6 114.9 73.1 86.7 REMARK 620 6 HOH B 553 O 104.0 73.0 99.0 86.5 168.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C2E A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IMD A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HB0 A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C2E B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IMD B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HB0 B 405 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4KIE RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE EAL DOMAIN OF C-DI-GMP SPECIFIC REMARK 900 PHOSPHODIESTERASE YAHA REMARK 900 RELATED ID: 4LYK RELATED DB: PDB DBREF 4LJ3 A 101 362 UNP P21514 YAHA_ECOLI 101 362 DBREF 4LJ3 B 101 362 UNP P21514 YAHA_ECOLI 101 362 SEQADV 4LJ3 MET A 84 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 HIS A 85 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 HIS A 86 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 HIS A 87 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 HIS A 88 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 HIS A 89 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 HIS A 90 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 SER A 91 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 SER A 92 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 GLY A 93 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 LEU A 94 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 VAL A 95 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 PRO A 96 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 ARG A 97 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 GLY A 98 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 SER A 99 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 HIS A 100 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 MET B 84 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 HIS B 85 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 HIS B 86 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 HIS B 87 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 HIS B 88 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 HIS B 89 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 HIS B 90 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 SER B 91 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 SER B 92 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 GLY B 93 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 LEU B 94 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 VAL B 95 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 PRO B 96 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 ARG B 97 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 GLY B 98 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 SER B 99 UNP P21514 EXPRESSION TAG SEQADV 4LJ3 HIS B 100 UNP P21514 EXPRESSION TAG SEQRES 1 A 279 MET HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO SEQRES 2 A 279 ARG GLY SER HIS ASP ASN HIS TYR HIS HIS ILE VAL THR SEQRES 3 A 279 PRO GLU ALA ILE SER LEU ALA LEU GLU ASN HIS GLU PHE SEQRES 4 A 279 LYS PRO TRP ILE GLN PRO VAL PHE CYS ALA GLN THR GLY SEQRES 5 A 279 VAL LEU THR GLY CYS GLU VAL LEU VAL ARG TRP GLU HIS SEQRES 6 A 279 PRO GLN THR GLY ILE ILE PRO PRO ASP GLN PHE ILE PRO SEQRES 7 A 279 LEU ALA GLU SER SER GLY LEU ILE VAL ILE MET THR ARG SEQRES 8 A 279 GLN LEU MET LYS GLN THR ALA ASP ILE LEU MET PRO VAL SEQRES 9 A 279 LYS HIS LEU LEU PRO ASP ASN PHE HIS ILE GLY ILE ASN SEQRES 10 A 279 VAL SER ALA GLY CYS PHE LEU ALA ALA GLY PHE GLU LYS SEQRES 11 A 279 GLU CYS LEU ASN LEU VAL ASN LYS LEU GLY ASN ASP LYS SEQRES 12 A 279 ILE LYS LEU VAL LEU GLU LEU THR GLU ARG ASN PRO ILE SEQRES 13 A 279 PRO VAL THR PRO GLU ALA ARG ALA ILE PHE ASP SER LEU SEQRES 14 A 279 HIS GLN HIS ASN ILE THR PHE ALA LEU ASP ASP PHE GLY SEQRES 15 A 279 THR GLY TYR ALA THR TYR ARG TYR LEU GLN ALA PHE PRO SEQRES 16 A 279 VAL ASP PHE ILE LYS ILE ASP LYS SER PHE VAL GLN MET SEQRES 17 A 279 ALA SER VAL ASP GLU ILE SER GLY HIS ILE VAL ASP ASN SEQRES 18 A 279 ILE VAL GLU LEU ALA ARG LYS PRO GLY LEU SER ILE VAL SEQRES 19 A 279 ALA GLU GLY VAL GLU THR GLN GLU GLN ALA ASP LEU MET SEQRES 20 A 279 ILE GLY LYS GLY VAL HIS PHE LEU GLN GLY TYR LEU TYR SEQRES 21 A 279 SER PRO PRO VAL PRO GLY ASN LYS PHE ILE SER GLU TRP SEQRES 22 A 279 VAL MET LYS ALA GLY GLY SEQRES 1 B 279 MET HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO SEQRES 2 B 279 ARG GLY SER HIS ASP ASN HIS TYR HIS HIS ILE VAL THR SEQRES 3 B 279 PRO GLU ALA ILE SER LEU ALA LEU GLU ASN HIS GLU PHE SEQRES 4 B 279 LYS PRO TRP ILE GLN PRO VAL PHE CYS ALA GLN THR GLY SEQRES 5 B 279 VAL LEU THR GLY CYS GLU VAL LEU VAL ARG TRP GLU HIS SEQRES 6 B 279 PRO GLN THR GLY ILE ILE PRO PRO ASP GLN PHE ILE PRO SEQRES 7 B 279 LEU ALA GLU SER SER GLY LEU ILE VAL ILE MET THR ARG SEQRES 8 B 279 GLN LEU MET LYS GLN THR ALA ASP ILE LEU MET PRO VAL SEQRES 9 B 279 LYS HIS LEU LEU PRO ASP ASN PHE HIS ILE GLY ILE ASN SEQRES 10 B 279 VAL SER ALA GLY CYS PHE LEU ALA ALA GLY PHE GLU LYS SEQRES 11 B 279 GLU CYS LEU ASN LEU VAL ASN LYS LEU GLY ASN ASP LYS SEQRES 12 B 279 ILE LYS LEU VAL LEU GLU LEU THR GLU ARG ASN PRO ILE SEQRES 13 B 279 PRO VAL THR PRO GLU ALA ARG ALA ILE PHE ASP SER LEU SEQRES 14 B 279 HIS GLN HIS ASN ILE THR PHE ALA LEU ASP ASP PHE GLY SEQRES 15 B 279 THR GLY TYR ALA THR TYR ARG TYR LEU GLN ALA PHE PRO SEQRES 16 B 279 VAL ASP PHE ILE LYS ILE ASP LYS SER PHE VAL GLN MET SEQRES 17 B 279 ALA SER VAL ASP GLU ILE SER GLY HIS ILE VAL ASP ASN SEQRES 18 B 279 ILE VAL GLU LEU ALA ARG LYS PRO GLY LEU SER ILE VAL SEQRES 19 B 279 ALA GLU GLY VAL GLU THR GLN GLU GLN ALA ASP LEU MET SEQRES 20 B 279 ILE GLY LYS GLY VAL HIS PHE LEU GLN GLY TYR LEU TYR SEQRES 21 B 279 SER PRO PRO VAL PRO GLY ASN LYS PHE ILE SER GLU TRP SEQRES 22 B 279 VAL MET LYS ALA GLY GLY HET C2E A 401 46 HET CA A 402 1 HET CA A 403 1 HET IMD A 404 5 HET HB0 A 405 9 HET C2E B 401 46 HET CA B 402 1 HET CA B 403 1 HET IMD B 404 5 HET HB0 B 405 9 HETNAM C2E 9,9'-[(2R,3R,3AS,5S,7AR,9R,10R,10AS,12S,14AR)-3,5,10, HETNAM 2 C2E 12-TETRAHYDROXY-5,12-DIOXIDOOCTAHYDRO-2H,7H-DIFURO[3, HETNAM 3 C2E 2-D:3',2'-J][1,3,7,9,2, HETNAM 4 C2E 8]TETRAOXADIPHOSPHACYCLODODECINE-2,9-DIYL]BIS(2-AMINO- HETNAM 5 C2E 1,9-DIHYDRO-6H-PURIN-6-ONE) HETNAM CA CALCIUM ION HETNAM IMD IMIDAZOLE HETNAM HB0 TRANS-4-(HYDROXYMETHYL)CYCLOHEXANOL HETSYN C2E C-DI-GMP; CYCLIC DIGUANOSINE MONOPHOSPHATE FORMUL 3 C2E 2(C20 H24 N10 O14 P2) FORMUL 4 CA 4(CA 2+) FORMUL 6 IMD 2(C3 H5 N2 1+) FORMUL 7 HB0 2(C7 H14 O2) FORMUL 13 HOH *412(H2 O) HELIX 1 1 THR A 109 ASN A 119 1 11 HELIX 2 2 PRO A 155 GLN A 158 5 4 HELIX 3 3 PHE A 159 GLY A 167 1 9 HELIX 4 4 LEU A 168 MET A 185 1 18 HELIX 5 5 PRO A 186 LEU A 191 5 6 HELIX 6 6 SER A 202 ALA A 208 1 7 HELIX 7 7 GLY A 210 GLY A 223 1 14 HELIX 8 8 THR A 242 HIS A 255 1 14 HELIX 9 9 ALA A 269 PHE A 277 1 9 HELIX 10 10 ASP A 285 GLN A 290 1 6 HELIX 11 11 ILE A 297 ARG A 310 1 14 HELIX 12 12 THR A 323 LYS A 333 1 11 HELIX 13 13 GLY A 349 TRP A 356 1 8 HELIX 14 14 THR B 109 ASN B 119 1 11 HELIX 15 15 PRO B 155 GLN B 158 5 4 HELIX 16 16 PHE B 159 GLY B 167 1 9 HELIX 17 17 LEU B 168 MET B 185 1 18 HELIX 18 18 PRO B 186 LEU B 191 5 6 HELIX 19 19 SER B 202 ALA B 208 1 7 HELIX 20 20 GLY B 210 GLY B 223 1 14 HELIX 21 21 THR B 242 HIS B 255 1 14 HELIX 22 22 ALA B 269 PHE B 277 1 9 HELIX 23 23 ASP B 285 GLN B 290 1 6 HELIX 24 24 ILE B 297 LYS B 311 1 15 HELIX 25 25 THR B 323 LYS B 333 1 11 HELIX 26 26 GLY B 349 TRP B 356 1 8 SHEET 1 A 2 HIS A 105 VAL A 108 0 SHEET 2 A 2 HIS B 105 VAL B 108 -1 O HIS B 105 N VAL A 108 SHEET 1 B 4 GLY A 152 ILE A 154 0 SHEET 2 B 4 LEU A 137 HIS A 148 -1 N TRP A 146 O ILE A 154 SHEET 3 B 4 PHE A 122 CYS A 131 -1 N LYS A 123 O ARG A 145 SHEET 4 B 4 VAL A 347 PRO A 348 -1 O VAL A 347 N ILE A 126 SHEET 1 C10 GLY A 152 ILE A 154 0 SHEET 2 C10 LEU A 137 HIS A 148 -1 N TRP A 146 O ILE A 154 SHEET 3 C10 PHE A 195 ASN A 200 1 O GLY A 198 N VAL A 142 SHEET 4 C10 ILE A 227 LEU A 233 1 O GLU A 232 N ILE A 199 SHEET 5 C10 THR A 258 PHE A 264 1 O ASP A 262 N LEU A 233 SHEET 6 C10 PHE A 281 ILE A 284 1 O LYS A 283 N PHE A 264 SHEET 7 C10 SER A 315 GLU A 319 1 O VAL A 317 N ILE A 282 SHEET 8 C10 PHE A 337 GLN A 339 1 O PHE A 337 N ALA A 318 SHEET 9 C10 PHE A 122 CYS A 131 -1 N PHE A 130 O LEU A 338 SHEET 10 C10 VAL A 347 PRO A 348 -1 O VAL A 347 N ILE A 126 SHEET 1 D 4 GLY B 152 ILE B 154 0 SHEET 2 D 4 LEU B 137 HIS B 148 -1 N TRP B 146 O ILE B 154 SHEET 3 D 4 PHE B 122 CYS B 131 -1 N LYS B 123 O ARG B 145 SHEET 4 D 4 VAL B 347 PRO B 348 -1 O VAL B 347 N ILE B 126 SHEET 1 E10 GLY B 152 ILE B 154 0 SHEET 2 E10 LEU B 137 HIS B 148 -1 N TRP B 146 O ILE B 154 SHEET 3 E10 PHE B 195 ASN B 200 1 O GLY B 198 N VAL B 142 SHEET 4 E10 ILE B 227 LEU B 233 1 O VAL B 230 N ILE B 197 SHEET 5 E10 THR B 258 PHE B 264 1 O ASP B 262 N LEU B 233 SHEET 6 E10 PHE B 281 ILE B 284 1 O LYS B 283 N PHE B 264 SHEET 7 E10 SER B 315 GLU B 319 1 O VAL B 317 N ILE B 282 SHEET 8 E10 PHE B 337 GLN B 339 1 O PHE B 337 N ALA B 318 SHEET 9 E10 PHE B 122 CYS B 131 -1 N PHE B 130 O LEU B 338 SHEET 10 E10 VAL B 347 PRO B 348 -1 O VAL B 347 N ILE B 126 LINK OE1 GLU A 141 CA CA A 402 1555 1555 2.42 LINK OD1 ASN A 200 CA CA A 402 1555 1555 2.50 LINK OE1 GLU A 232 CA CA A 402 1555 1555 2.32 LINK OD1 ASP A 262 CA CA A 402 1555 1555 2.39 LINK OD2 ASP A 262 CA CA A 402 1555 1555 2.58 LINK OD1 ASP A 263 CA CA A 403 1555 1555 2.10 LINK OE2AGLU A 319 CA CA A 403 1555 1555 2.35 LINK OE1AGLU A 319 CA CA A 403 1555 1555 2.60 LINK OE1BGLU A 319 CA CA A 403 1555 1555 2.64 LINK O2P C2E A 401 CA CA A 402 1555 1555 2.26 LINK O1P C2E A 401 CA CA A 403 1555 1555 2.29 LINK CA CA A 402 O HOH A 505 1555 1555 2.36 LINK CA CA A 403 O HOH A 506 1555 1555 2.51 LINK CA CA A 403 O HOH A 520 1555 1555 2.33 LINK CA CA A 403 O HOH A 586 1555 1555 2.56 LINK OE1 GLU B 141 CA CA B 402 1555 1555 2.36 LINK OD1 ASN B 200 CA CA B 402 1555 1555 2.44 LINK OE1 GLU B 232 CA CA B 402 1555 1555 2.30 LINK OD1 ASP B 262 CA CA B 402 1555 1555 2.46 LINK OD2 ASP B 262 CA CA B 402 1555 1555 2.57 LINK OD1 ASP B 263 CA CA B 403 1555 1555 2.12 LINK OD1 ASP B 285 CA CA B 403 1555 1555 2.74 LINK OE2 GLU B 319 CA CA B 403 1555 1555 2.26 LINK O2P C2E B 401 CA CA B 402 1555 1555 2.36 LINK O1P C2E B 401 CA CA B 403 1555 1555 2.40 LINK CA CA B 402 O HOH B 503 1555 1555 2.43 LINK CA CA B 403 O HOH B 505 1555 1555 2.47 LINK CA CA B 403 O HOH B 553 1555 1555 2.30 SITE 1 AC1 33 GLN A 127 GLU A 141 LEU A 143 VAL A 144 SITE 2 AC1 33 ARG A 145 PRO A 156 ILE A 169 LEU A 176 SITE 3 AC1 33 ASN A 200 ASP A 262 ASP A 263 LYS A 286 SITE 4 AC1 33 GLU A 319 GLY A 320 VAL A 321 GLU A 322 SITE 5 AC1 33 GLY A 340 TYR A 341 PRO A 346 CA A 402 SITE 6 AC1 33 CA A 403 IMD A 404 HOH A 504 HOH A 507 SITE 7 AC1 33 HOH A 512 HOH A 521 HOH A 574 HOH A 583 SITE 8 AC1 33 HOH A 586 HOH A 653 HOH A 685 HOH A 693 SITE 9 AC1 33 HOH A 695 SITE 1 AC2 6 GLU A 141 ASN A 200 GLU A 232 ASP A 262 SITE 2 AC2 6 C2E A 401 HOH A 505 SITE 1 AC3 6 ASP A 263 GLU A 319 C2E A 401 HOH A 506 SITE 2 AC3 6 HOH A 520 HOH A 586 SITE 1 AC4 7 ASN A 200 VAL A 201 GLU A 232 THR A 234 SITE 2 AC4 7 ASP A 262 C2E A 401 HOH A 588 SITE 1 AC5 9 VAL A 129 THR A 138 GLY A 139 CYS A 140 SITE 2 AC5 9 HIS A 196 VAL A 230 GLU A 232 VAL A 317 SITE 3 AC5 9 PHE A 337 SITE 1 AC6 28 GLN B 127 GLU B 141 LEU B 143 VAL B 144 SITE 2 AC6 28 ARG B 145 PRO B 156 GLU B 164 LEU B 176 SITE 3 AC6 28 ASN B 200 ASP B 262 ASP B 263 LYS B 286 SITE 4 AC6 28 GLU B 319 GLY B 320 VAL B 321 GLU B 322 SITE 5 AC6 28 GLY B 340 TYR B 341 PRO B 346 CA B 402 SITE 6 AC6 28 CA B 403 IMD B 404 HOH B 501 HOH B 506 SITE 7 AC6 28 HOH B 510 HOH B 514 HOH B 561 HOH B 575 SITE 1 AC7 6 GLU B 141 ASN B 200 GLU B 232 ASP B 262 SITE 2 AC7 6 C2E B 401 HOH B 503 SITE 1 AC8 6 ASP B 263 ASP B 285 GLU B 319 C2E B 401 SITE 2 AC8 6 HOH B 505 HOH B 553 SITE 1 AC9 7 ASN B 200 VAL B 201 GLU B 232 THR B 234 SITE 2 AC9 7 ASP B 262 C2E B 401 HOH B 658 SITE 1 BC1 8 VAL B 129 THR B 138 GLY B 139 HIS B 196 SITE 2 BC1 8 VAL B 230 GLU B 232 VAL B 317 PHE B 337 CRYST1 56.693 70.300 66.636 90.00 98.68 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017639 0.000000 0.002693 0.00000 SCALE2 0.000000 0.014225 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015181 0.00000